Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:29:30 (1304904): wrapper (7.7.26015): starting
18:29:30 (1304904): wrapper: running run_atlas (--nthreads 6)
[2026-02-04 18:29:30] Arguments: --nthreads 6
[2026-02-04 18:29:30] Threads: 6
[2026-02-04 18:29:30] Checking for CVMFS
[2026-02-04 18:29:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-04 18:29:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-04 18:29:48] Running cvmfs_config stat atlas.cern.ch
[2026-02-04 18:29:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-04 18:29:49] 2.13.3.0 1291315 34 48444 155862 3 11 49914624 52428800 929 130560 0 43604 99.996 2680 26 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-02-04 18:29:49] CVMFS is ok
[2026-02-04 18:29:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 18:29:49] Checking for apptainer binary...
[2026-02-04 18:29:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-04 18:29:49] Running /usr/bin/apptainer --version
[2026-02-04 18:29:49] apptainer version 1.4.5-2.el9
[2026-02-04 18:29:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 18:29:49] testio008
[2026-02-04 18:29:49] apptainer works
[2026-02-04 18:29:49] Set ATHENA_PROC_NUMBER=6
[2026-02-04 18:29:49] Set ATHENA_CORE_NUMBER=6
[2026-02-04 18:29:49] Starting ATLAS job with PandaID=7000016536
[2026-02-04 18:29:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 19:51:09]  *** The last 200 lines of the pilot log: ***
[2026-02-04 19:51:09]  guid=4fa97087-fef6-461f-b057-5bd32838e4ed
[2026-02-04 19:51:09]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-04 19:51:09]  is_altstaged=None
[2026-02-04 19:51:09]  is_tar=False
[2026-02-04 19:51:09]  lfn=log.48317892._012253.job.log.tgz.1
[2026-02-04 19:51:09]  mtime=0
[2026-02-04 19:51:09]  protocol_id=None
[2026-02-04 19:51:09]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-04 19:51:09]  replicas=None
[2026-02-04 19:51:09]  scope=mc23_13p6TeV
[2026-02-04 19:51:09]  status=None
[2026-02-04 19:51:09]  status_code=0
[2026-02-04 19:51:09]  storage_token=
[2026-02-04 19:51:09]  surl=/var/lib/boinc/slots/4/PanDA_Pilot-7000016536/log.48317892._012253.job.log.tgz.1
[2026-02-04 19:51:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/10/log.48317892._012253.job.log.tgz.1
[2026-02-04 19:51:09]  workdir=None
[2026-02-04 19:51:09] ]
[2026-02-04 19:51:09] 2026-02-04 10:50:19,915 | INFO     | transferring file log.48317892._012253.job.log.tgz.1 from /var/lib/boinc/slots/4/PanDA_Pilot-7000016536/log.48317892._012253.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-02-04 19:51:09] 2026-02-04 10:50:19,916 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/4/PanDA_Pilot-7000016536/log.48317892._012253.job.log.tgz.1 /var/lib/boinc/slots/4/log.48317892._012253.job
[2026-02-04 19:51:09] 2026-02-04 10:50:19,923 | INFO     | adding to output.list: log.48317892._012253.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f4/10/log.48317892._012253.job.log.tg
[2026-02-04 19:51:09] 2026-02-04 10:50:19,923 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-04 19:51:09] 2026-02-04 10:50:19,923 | INFO     | summary of transferred files:
[2026-02-04 19:51:09] 2026-02-04 10:50:19,923 | INFO     |  -- lfn=log.48317892._012253.job.log.tgz.1, status_code=0, status=transferred
[2026-02-04 19:51:09] 2026-02-04 10:50:19,923 | INFO     | stage-out finished correctly
[2026-02-04 19:51:09] 2026-02-04 10:50:21,360 | INFO     | monitor loop #366: job 0:7000016536 is in state 'finished'
[2026-02-04 19:51:09] 2026-02-04 10:50:21,360 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-04 19:51:09] 2026-02-04 10:50:21,458 | INFO     | time since job start (4765s) is within the limit (349056.0s)
[2026-02-04 19:51:09] 2026-02-04 10:50:22,383 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-04 19:51:09] 2026-02-04 10:50:23,463 | INFO     | time since job start (4767s) is within the limit (349056.0s)
[2026-02-04 19:51:09] 2026-02-04 10:50:23,863 | INFO     | monitor loop #367: job 0:7000016536 is in state 'finished'
[2026-02-04 19:51:09] 2026-02-04 10:50:23,863 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-04 19:51:09] 2026-02-04 10:50:24,845 | INFO     | job 7000016536 has state=finished
[2026-02-04 19:51:09] 2026-02-04 10:50:24,846 | INFO     | preparing for final server update for job 7000016536 in state='finished'
[2026-02-04 19:51:09] 2026-02-04 10:50:24,846 | INFO     | reading metadata from: /var/lib/boinc/slots/4/PanDA_Pilot-7000016536/jobReport.json
[2026-02-04 19:51:09] 2026-02-04 10:50:24,847 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/4/workernode_map.json
[2026-02-04 19:51:09] 2026-02-04 10:50:24,847 | INFO     | this job has now completed (state=finished)
[2026-02-04 19:51:09] 2026-02-04 10:50:24,847 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-04 19:51:09] 2026-02-04 10:50:24,847 | INFO     | log transfer has been attempted: DONE
[2026-02-04 19:51:09] 2026-02-04 10:50:24,847 | INFO     | job 7000016536 has finished - writing final server update
[2026-02-04 19:51:09] 2026-02-04 10:50:24,847 | INFO     | total number of processed events: 400 (read)
[2026-02-04 19:51:09] 2026-02-04 10:50:24,849 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-7000016536/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 19:51:09] 2026-02-04 10:50:24,849 | INFO     | extracted standard info from prmon json
[2026-02-04 19:51:09] 2026-02-04 10:50:24,849 | INFO     | extracted standard memory fields from prmon json
[2026-02-04 19:51:09] 2026-02-04 10:50:24,849 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-04 19:51:09] 2026-02-04 10:50:24,849 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-04 19:51:09] 2026-02-04 10:50:24,849 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-04 19:51:09] 2026-02-04 10:50:24,850 | INFO     | fitting pss+swap vs Time
[2026-02-04 19:51:09] 2026-02-04 10:50:24,850 | INFO     | sum of square deviations: 110960220.0
[2026-02-04 19:51:09] 2026-02-04 10:50:24,850 | INFO     | sum of deviations: -14251827354.0
[2026-02-04 19:51:09] 2026-02-04 10:50:24,850 | INFO     | mean x: 1770199915.0
[2026-02-04 19:51:09] 2026-02-04 10:50:24,850 | INFO     | mean y: 2689545.7887323946
[2026-02-04 19:51:09] 2026-02-04 10:50:24,850 | INFO     | intersect: 227368709283.7225
[2026-02-04 19:51:09] 2026-02-04 10:50:24,851 | INFO     | chi2: 0.11848363571422955
[2026-02-04 19:51:09] 2026-02-04 10:50:24,851 | INFO     | current memory leak: -128.44 B/s (using 71 data points, chi2=0.12)
[2026-02-04 19:51:09] 2026-02-04 10:50:24,851 | INFO     | could have reported an average CPU frequency of 4250 MHz (6 samples)
[2026-02-04 19:51:09] 2026-02-04 10:50:24,851 | INFO     | ..............................
[2026-02-04 19:51:09] 2026-02-04 10:50:24,851 | INFO     | . Timing measurements:
[2026-02-04 19:51:09] 2026-02-04 10:50:24,851 | INFO     | . get job = 0 s
[2026-02-04 19:51:09] 2026-02-04 10:50:24,851 | INFO     | . initial setup = 9 s
[2026-02-04 19:51:09] 2026-02-04 10:50:24,851 | INFO     | . payload setup = 4 s
[2026-02-04 19:51:09] 2026-02-04 10:50:24,851 | INFO     | . stage-in = 0 s
[2026-02-04 19:51:09] 2026-02-04 10:50:24,851 | INFO     | . payload execution = 4744 s
[2026-02-04 19:51:09] 2026-02-04 10:50:24,851 | INFO     | . stage-out = 0 s
[2026-02-04 19:51:09] 2026-02-04 10:50:24,851 | INFO     | . log creation = 0 s
[2026-02-04 19:51:09] 2026-02-04 10:50:24,851 | INFO     | ..............................
[2026-02-04 19:51:09] 2026-02-04 10:50:24,889 | INFO     | 
[2026-02-04 19:51:09] 2026-02-04 10:50:24,889 | INFO     | job summary report
[2026-02-04 19:51:09] 2026-02-04 10:50:24,889 | INFO     | --------------------------------------------------
[2026-02-04 19:51:09] 2026-02-04 10:50:24,889 | INFO     | PanDA job id: 7000016536
[2026-02-04 19:51:09] 2026-02-04 10:50:24,889 | INFO     | task id: 48317892
[2026-02-04 19:51:09] 2026-02-04 10:50:24,889 | INFO     | errors: (none)
[2026-02-04 19:51:09] 2026-02-04 10:50:24,889 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 19:51:09] 2026-02-04 10:50:24,889 | INFO     | pilot state: finished 
[2026-02-04 19:51:09] 2026-02-04 10:50:24,889 | INFO     | transexitcode: 0
[2026-02-04 19:51:09] 2026-02-04 10:50:24,889 | INFO     | exeerrorcode: 0
[2026-02-04 19:51:09] 2026-02-04 10:50:24,889 | INFO     | exeerrordiag: 
[2026-02-04 19:51:09] 2026-02-04 10:50:24,889 | INFO     | exitcode: 0
[2026-02-04 19:51:09] 2026-02-04 10:50:24,889 | INFO     | exitmsg: OK
[2026-02-04 19:51:09] 2026-02-04 10:50:24,889 | INFO     | cpuconsumptiontime: 26574 s
[2026-02-04 19:51:09] 2026-02-04 10:50:24,889 | INFO     | nevents: 400
[2026-02-04 19:51:09] 2026-02-04 10:50:24,889 | INFO     | neventsw: 0
[2026-02-04 19:51:09] 2026-02-04 10:50:24,889 | INFO     | pid: 1313666
[2026-02-04 19:51:09] 2026-02-04 10:50:24,889 | INFO     | pgrp: 1313666
[2026-02-04 19:51:09] 2026-02-04 10:50:24,890 | INFO     | corecount: 6
[2026-02-04 19:51:09] 2026-02-04 10:50:24,890 | INFO     | event service: False
[2026-02-04 19:51:09] 2026-02-04 10:50:24,890 | INFO     | sizes: {0: 2278225, 11: 2278225, 4752: 2304524, 4753: 2313522, 4755: 2313578, 4758: 2313772}
[2026-02-04 19:51:09] 2026-02-04 10:50:24,890 | INFO     | --------------------------------------------------
[2026-02-04 19:51:09] 2026-02-04 10:50:24,890 | INFO     | 
[2026-02-04 19:51:09] 2026-02-04 10:50:24,890 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-02-04 19:51:09] 2026-02-04 10:50:24,901 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 19:51:09] 2026-02-04 10:50:24,901 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 19:51:09] 2026-02-04 10:50:24,901 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 19:51:09] 2026-02-04 10:50:24,901 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 19:51:09] 2026-02-04 10:50:24,901 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 19:51:09] 2026-02-04 10:50:24,901 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 19:51:09] 2026-02-04 10:50:24,901 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 19:51:09] 2026-02-04 10:50:24,901 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 19:51:09] 2026-02-04 10:50:24,901 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 19:51:09] 2026-02-04 10:50:24,901 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 19:51:09] 2026-02-04 10:50:24,901 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 19:51:09] 2026-02-04 10:50:24,902 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 19:51:09] 2026-02-04 10:50:24,902 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 19:51:09] 2026-02-04 10:50:24,902 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 19:51:09] 2026-02-04 10:50:24,902 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 19:51:09] 2026-02-04 10:50:24,902 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 19:51:09] 2026-02-04 10:50:24,902 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 19:51:09] 2026-02-04 10:50:24,902 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 19:51:09] 2026-02-04 10:50:24,902 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 19:51:09] 2026-02-04 10:50:24,902 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 19:51:09] 2026-02-04 10:50:24,902 | INFO     | job 7000016536 has completed (purged errors)
[2026-02-04 19:51:09] 2026-02-04 10:50:24,902 | INFO     | overall cleanup function is called
[2026-02-04 19:51:09] 2026-02-04 10:50:25,907 | INFO     | --- collectZombieJob: --- 10, [1313666]
[2026-02-04 19:51:09] 2026-02-04 10:50:25,907 | INFO     | zombie collector waiting for pid 1313666
[2026-02-04 19:51:09] 2026-02-04 10:50:25,907 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 19:51:09] 2026-02-04 10:50:25,907 | INFO     | collected zombie processes
[2026-02-04 19:51:09] 2026-02-04 10:50:25,907 | INFO     | will attempt to kill all subprocesses of pid=1313666
[2026-02-04 19:51:09] 2026-02-04 10:50:25,934 | INFO     | process IDs to be killed: [1313666] (in reverse order)
[2026-02-04 19:51:09] 2026-02-04 10:50:25,951 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 19:51:09] 2026-02-04 10:50:25,952 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 19:51:09] 2026-02-04 10:50:25,953 | INFO     | did not find any defunct processes belonging to 1313666
[2026-02-04 19:51:09] 2026-02-04 10:50:25,955 | INFO     | did not find any defunct processes belonging to 1313666
[2026-02-04 19:51:09] 2026-02-04 10:50:25,955 | INFO     | ready for new job
[2026-02-04 19:51:09] 2026-02-04 10:50:25,955 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 19:51:09] 2026-02-04 10:50:25,955 | INFO     | **************************************
[2026-02-04 19:51:09] 2026-02-04 10:50:25,956 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 19:51:09] 2026-02-04 10:50:25,956 | INFO     | **************************************
[2026-02-04 19:51:09] 2026-02-04 10:50:25,956 | INFO     | 
[2026-02-04 19:51:09] 2026-02-04 10:50:25,956 | INFO     | architecture information:
[2026-02-04 19:51:09] 2026-02-04 10:50:25,956 | INFO     | executing command: cat /etc/os-release
[2026-02-04 19:51:09] 2026-02-04 10:50:25,963 | INFO     | cat /etc/os-release:
[2026-02-04 19:51:09] NAME="CentOS Linux"
[2026-02-04 19:51:09] VERSION="7 (Core)"
[2026-02-04 19:51:09] ID="centos"
[2026-02-04 19:51:09] ID_LIKE="rhel fedora"
[2026-02-04 19:51:09] VERSION_ID="7"
[2026-02-04 19:51:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 19:51:09] ANSI_COLOR="0;31"
[2026-02-04 19:51:09] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 19:51:09] HOME_URL="https://www.centos.org/"
[2026-02-04 19:51:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 19:51:09] 
[2026-02-04 19:51:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 19:51:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 19:51:09] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 19:51:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 19:51:09] 
[2026-02-04 19:51:09] 2026-02-04 10:50:25,963 | INFO     | **************************************
[2026-02-04 19:51:09] 2026-02-04 10:50:26,466 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-02-04 19:51:09] 2026-02-04 10:50:26,472 | INFO     | sufficient remaining disk space (276099497984 B)
[2026-02-04 19:51:09] 2026-02-04 10:50:26,473 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 19:51:09] 2026-02-04 10:50:26,473 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 19:51:09] 2026-02-04 10:50:26,473 | INFO     | update_server=False
[2026-02-04 19:51:09] 2026-02-04 10:50:26,473 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 19:51:09] 2026-02-04 10:50:26,473 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 19:51:09] 2026-02-04 10:50:26,495 | INFO     | all data control threads have been joined
[2026-02-04 19:51:09] 2026-02-04 10:50:26,986 | INFO     | all payload control threads have been joined
[2026-02-04 19:51:09] 2026-02-04 10:50:27,376 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 19:51:09] 2026-02-04 10:50:27,376 | INFO     | aborting loop
[2026-02-04 19:51:09] 2026-02-04 10:50:27,478 | INFO     | [job] queue monitor thread has finished
[2026-02-04 19:51:09] 2026-02-04 10:50:27,478 | INFO     | [job] retrieve thread has finished
[2026-02-04 19:51:09] 2026-02-04 10:50:27,500 | INFO     | [data] control thread has finished
[2026-02-04 19:51:09] 2026-02-04 10:50:27,556 | INFO     | [payload] failed_post thread has finished
[2026-02-04 19:51:09] 2026-02-04 10:50:27,581 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 19:51:09] 2026-02-04 10:50:27,644 | INFO     | all job control threads have been joined
[2026-02-04 19:51:09] 2026-02-04 10:50:27,966 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 19:51:09] 2026-02-04 10:50:27,991 | INFO     | [payload] control thread has finished
[2026-02-04 19:51:09] 2026-02-04 10:50:28,210 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 19:51:09] 2026-02-04 10:50:28,266 | INFO     | [payload] validate_post thread has finished
[2026-02-04 19:51:09] 2026-02-04 10:50:28,381 | INFO     | [job] job monitor thread has finished
[2026-02-04 19:51:09] 2026-02-04 10:50:28,445 | INFO     | [job] validate thread has finished
[2026-02-04 19:51:09] 2026-02-04 10:50:28,464 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 19:51:09] 2026-02-04 10:50:28,560 | INFO     | [data] copytool_in thread has finished
[2026-02-04 19:51:09] 2026-02-04 10:50:28,566 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 19:51:09] 2026-02-04 10:50:28,649 | INFO     | [job] control thread has finished
[2026-02-04 19:51:09] 2026-02-04 10:50:29,972 | INFO     | [data] copytool_out thread has finished
[2026-02-04 19:51:09] 2026-02-04 10:50:32,469 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 19:51:09] 2026-02-04 10:50:37,169 | INFO     | job.realtimelogging is not enabled
[2026-02-04 19:51:09] 2026-02-04 10:50:38,174 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 19:51:09] 2026-02-04 10:50:56,556 | INFO     | PID=1309024 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-04 19:51:09] 2026-02-04 10:50:56,556 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 19:51:09] 2026-02-04 10:50:56,556 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 19:51:09] 2026-02-04 10:50:56,556 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 19:51:09] 2026-02-04 10:51:03,441 | INFO     | [monitor] cgroup control has ended
[2026-02-04 19:51:09] 2026-02-04 10:51:04,475 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140430424074048)>', '<ExcThread(monitor, started 140430054254336)>']
[2026-02-04 19:51:09] 2026-02-04 10:51:04,596 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 19:51:09] 2026-02-04 10:51:04,596 | INFO     | [monitor] control thread has ended
[2026-02-04 19:51:09] 2026-02-04 10:51:09,500 | INFO     | all workflow threads have been joined
[2026-02-04 19:51:09] 2026-02-04 10:51:09,500 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 19:51:09] 2026-02-04 10:51:09,500 | INFO     | traces error code: 0
[2026-02-04 19:51:09] 2026-02-04 10:51:09,500 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 19:51:09] 2026-02-04 10:51:09,570 [wrapper] ==== pilot stdout END ====
[2026-02-04 19:51:09] 2026-02-04 10:51:09,574 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 19:51:09] 2026-02-04 10:51:09,577 [wrapper] pilotpid: 1309024
[2026-02-04 19:51:09] 2026-02-04 10:51:09,578 [wrapper] Pilot exit status: 0
[2026-02-04 19:51:09] 2026-02-04 10:51:09,582 [wrapper] pandaids: 7000016536
[2026-02-04 19:51:09] 2026-02-04 10:51:09,621 [wrapper] cleanup supervisor_pilot 1318745 1309025
[2026-02-04 19:51:09] 2026-02-04 10:51:09,622 [wrapper] Test setup, not cleaning
[2026-02-04 19:51:09] 2026-02-04 10:51:09,624 [wrapper] apfmon messages muted
[2026-02-04 19:51:09] 2026-02-04 10:51:09,625 [wrapper] ==== wrapper stdout END ====
[2026-02-04 19:51:09] 2026-02-04 10:51:09,626 [wrapper] ==== wrapper stderr END ====
[2026-02-04 19:51:09]  *** Error codes and diagnostics ***
[2026-02-04 19:51:09]     "exeErrorCode": 0,
[2026-02-04 19:51:09]     "exeErrorDiag": "",
[2026-02-04 19:51:09]     "pilotErrorCode": 0,
[2026-02-04 19:51:09]     "pilotErrorDiag": "",
[2026-02-04 19:51:09]  *** Listing of results directory ***
[2026-02-04 19:51:09] total 672816
[2026-02-04 19:51:09] -rw-r--r--. 1 boinc boinc      5111 Feb  4 02:16 queuedata.json
[2026-02-04 19:51:09] -rwx------. 1 boinc boinc     36322 Feb  4 02:16 runpilot2-wrapper.sh
[2026-02-04 19:51:09] -rw-r--r--. 1 boinc boinc    584422 Feb  4 02:17 pilot3.tar.gz
[2026-02-04 19:51:09] -rw-r--r--. 1 boinc boinc       100 Feb  4 18:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 19:51:09] -rwxr-xr-x. 1 boinc boinc      7986 Feb  4 18:29 run_atlas
[2026-02-04 19:51:09] -rw-r--r--. 1 boinc boinc       105 Feb  4 18:29 job.xml
[2026-02-04 19:51:09] -rw-r--r--. 1 boinc boinc      9526 Feb  4 18:29 init_data.xml
[2026-02-04 19:51:09] -rw-r--r--. 2 boinc boinc 501403377 Feb  4 18:29 EVNT.48317889._000233.pool.root.1
[2026-02-04 19:51:09] -rw-r--r--. 2 boinc boinc     15845 Feb  4 18:29 start_atlas.sh
[2026-02-04 19:51:09] drwxrwx--x. 2 boinc boinc        68 Feb  4 18:29 shared
[2026-02-04 19:51:09] -rw-r--r--. 2 boinc boinc    597758 Feb  4 18:29 input.tar.gz
[2026-02-04 19:51:09] -rw-r--r--. 1 boinc boinc         0 Feb  4 18:29 boinc_lockfile
[2026-02-04 19:51:09] -rw-r--r--. 1 boinc boinc      2523 Feb  4 18:29 pandaJob.out
[2026-02-04 19:51:09] -rw-------. 1 boinc boinc   1009236 Feb  4 18:30 agis_schedconf.cvmfs.json
[2026-02-04 19:51:09] -rw-------. 1 boinc boinc   1511668 Feb  4 18:30 agis_ddmendpoints.agis.ALL.json
[2026-02-04 19:51:09] -rw-------. 1 boinc boinc       424 Feb  4 18:30 workernode_map.json
[2026-02-04 19:51:09] drwx------. 5 boinc boinc      4096 Feb  4 18:30 pilot3
[2026-02-04 19:51:09] -rw-------. 1 boinc boinc 181580424 Feb  4 19:49 HITS.48317892._012253.pool.root.1
[2026-02-04 19:51:09] -rw-r--r--. 1 boinc boinc       530 Feb  4 19:50 boinc_task_state.xml
[2026-02-04 19:51:09] -rw-------. 1 boinc boinc        95 Feb  4 19:50 pilot_heartbeat.json
[2026-02-04 19:51:09] -rw-------. 1 boinc boinc      1013 Feb  4 19:50 memory_monitor_summary.json
[2026-02-04 19:51:09] -rw-------. 1 boinc boinc    319353 Feb  4 19:50 log.48317892._012253.job.log.tgz.1
[2026-02-04 19:51:09] -rw-------. 1 boinc boinc      6314 Feb  4 19:50 heartbeat.json
[2026-02-04 19:51:09] -rw-r--r--. 1 boinc boinc        27 Feb  4 19:50 wrapper_checkpoint.txt
[2026-02-04 19:51:09] -rw-r--r--. 1 boinc boinc      8192 Feb  4 19:50 boinc_mmap_file
[2026-02-04 19:51:09] -rw-------. 1 boinc boinc      4817 Feb  4 19:51 pilotlog.txt
[2026-02-04 19:51:09] -rw-------. 1 boinc boinc    706579 Feb  4 19:51 log.48317892._012253.job.log.1
[2026-02-04 19:51:09] -rw-------. 1 boinc boinc       357 Feb  4 19:51 output.list
[2026-02-04 19:51:09] -rw-r--r--. 1 boinc boinc       620 Feb  4 19:51 runtime_log
[2026-02-04 19:51:09] -rw-------. 1 boinc boinc   1044480 Feb  4 19:51 result.tar.gz
[2026-02-04 19:51:09] -rw-r--r--. 1 boinc boinc      8774 Feb  4 19:51 runtime_log.err
[2026-02-04 19:51:09] -rw-------. 1 boinc boinc       642 Feb  4 19:51 KwQNDmrBZ78nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmUXVKDmp9kmVm.diag
[2026-02-04 19:51:09] -rw-r--r--. 1 boinc boinc     21067 Feb  4 19:51 stderr.txt
[2026-02-04 19:51:09] HITS file was successfully produced:
[2026-02-04 19:51:09] -rw-------. 1 boinc boinc 181580424 Feb  4 19:49 shared/HITS.pool.root.1
[2026-02-04 19:51:09]  *** Contents of shared directory: ***
[2026-02-04 19:51:09] total 668600
[2026-02-04 19:51:09] -rw-r--r--. 2 boinc boinc 501403377 Feb  4 18:29 ATLAS.root_0
[2026-02-04 19:51:09] -rw-r--r--. 2 boinc boinc     15845 Feb  4 18:29 start_atlas.sh
[2026-02-04 19:51:09] -rw-r--r--. 2 boinc boinc    597758 Feb  4 18:29 input.tar.gz
[2026-02-04 19:51:09] -rw-------. 1 boinc boinc 181580424 Feb  4 19:49 HITS.pool.root.1
[2026-02-04 19:51:09] -rw-------. 1 boinc boinc   1044480 Feb  4 19:51 result.tar.gz
19:51:11 (1304904): run_atlas exited; CPU time 26609.682956
19:51:11 (1304904): called boinc_finish(0)

</stderr_txt>
]]>

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