Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:17:34 (49671): wrapper (7.7.26015): starting
02:17:34 (49671): wrapper: running run_atlas (--nthreads 4)
[2026-02-04 02:17:34] Arguments: --nthreads 4
[2026-02-04 02:17:34] Threads: 4
[2026-02-04 02:17:34] Checking for CVMFS
[2026-02-04 02:17:34] No cvmfs_config command found, will try listing directly
[2026-02-04 02:17:34] CVMFS is ok
[2026-02-04 02:17:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-04 02:17:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-04 02:17:34] Further information can be found at the LHC@home message board.
[2026-02-04 02:17:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 02:17:34] Checking for apptainer binary...
[2026-02-04 02:17:34] which: no apptainer in ((null))
[2026-02-04 02:17:34] apptainer is not installed, using version from CVMFS
[2026-02-04 02:17:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 02:17:34] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot48/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2026-02-04 02:17:34] apptainer works
[2026-02-04 02:17:34] Set ATHENA_PROC_NUMBER=4
[2026-02-04 02:17:34] Set ATHENA_CORE_NUMBER=4
[2026-02-04 02:17:34] Starting ATLAS job with PandaID=6994524146
[2026-02-04 02:17:34] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot48/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 04:42:15]  *** The last 200 lines of the pilot log: ***
[2026-02-04 04:42:15] 2026-02-04 03:41:06,392 | INFO     | mean x: 1770172173.0
[2026-02-04 04:42:15] 2026-02-04 03:41:06,392 | INFO     | mean y: 2331777.8014184395
[2026-02-04 04:42:15] 2026-02-04 03:41:06,392 | INFO     | intersect: 24630814260.377064
[2026-02-04 04:42:15] 2026-02-04 03:41:06,392 | INFO     | chi2: 2.039002429545813
[2026-02-04 04:42:15] 2026-02-04 03:41:06,392 | INFO     | sum of square deviations: 779958810.0
[2026-02-04 04:42:15] 2026-02-04 03:41:06,393 | INFO     | sum of deviations: -2910675512.0
[2026-02-04 04:42:15] 2026-02-04 03:41:06,393 | INFO     | mean x: 1770172020.5
[2026-02-04 04:42:15] 2026-02-04 03:41:06,394 | INFO     | mean y: 2347048.029411765
[2026-02-04 04:42:15] 2026-02-04 03:41:06,394 | INFO     | intersect: 6608332243.705209
[2026-02-04 04:42:15] 2026-02-04 03:41:06,394 | INFO     | chi2: 1.2689608167084374
[2026-02-04 04:42:15] 2026-02-04 03:41:06,394 | INFO     | current chi2=1.2689608167084374 (change=37.7656054587881 %)
[2026-02-04 04:42:15] 2026-02-04 03:41:06,394 | INFO     | sum of square deviations: 697054930.0
[2026-02-04 04:42:15] 2026-02-04 03:41:06,395 | INFO     | sum of deviations: -2519843937.0
[2026-02-04 04:42:15] 2026-02-04 03:41:06,395 | INFO     | mean x: 1770171868.0
[2026-02-04 04:42:15] 2026-02-04 03:41:06,395 | INFO     | mean y: 2347767.3053435115
[2026-02-04 04:42:15] 2026-02-04 03:41:06,395 | INFO     | intersect: 6401494602.157748
[2026-02-04 04:42:15] 2026-02-04 03:41:06,396 | INFO     | chi2: 1.2692699820507998
[2026-02-04 04:42:15] 2026-02-04 03:41:06,396 | INFO     | current chi2=1.2692699820507998 (change=-0.02436366342376954 %)
[2026-02-04 04:42:15] 2026-02-04 03:41:06,396 | INFO     | right removable region: 130
[2026-02-04 04:42:15] 2026-02-04 03:41:06,396 | INFO     | sum of square deviations: 779958810.0
[2026-02-04 04:42:15] 2026-02-04 03:41:06,397 | INFO     | sum of deviations: -26102591984.000008
[2026-02-04 04:42:15] 2026-02-04 03:41:06,397 | INFO     | mean x: 1770172325.5
[2026-02-04 04:42:15] 2026-02-04 03:41:06,397 | INFO     | mean y: 2355115.632352941
[2026-02-04 04:42:15] 2026-02-04 03:41:06,397 | INFO     | intersect: 59244055268.86859
[2026-02-04 04:42:15] 2026-02-04 03:41:06,398 | INFO     | chi2: 0.830347696635352
[2026-02-04 04:42:15] 2026-02-04 03:41:06,398 | INFO     | current chi2=0.830347696635352 (change=59.27676766818215 %)
[2026-02-04 04:42:15] 2026-02-04 03:41:06,398 | INFO     | sum of square deviations: 697054930.0
[2026-02-04 04:42:15] 2026-02-04 03:41:06,399 | INFO     | sum of deviations: -22688232823.0
[2026-02-04 04:42:15] 2026-02-04 03:41:06,399 | INFO     | mean x: 1770172478.0
[2026-02-04 04:42:15] 2026-02-04 03:41:06,399 | INFO     | mean y: 2348874.3511450384
[2026-02-04 04:42:15] 2026-02-04 03:41:06,399 | INFO     | intersect: 57619164406.70932
[2026-02-04 04:42:15] 2026-02-04 03:41:06,399 | INFO     | chi2: 0.8248124797406002
[2026-02-04 04:42:15] 2026-02-04 03:41:06,399 | INFO     | current chi2=0.8248124797406002 (change=0.6666143492877753 %)
[2026-02-04 04:42:15] 2026-02-04 03:41:06,400 | INFO     | left removable region: 20
[2026-02-04 04:42:15] 2026-02-04 03:41:06,400 | INFO     | sum of square deviations: 412686807.5
[2026-02-04 04:42:15] 2026-02-04 03:41:06,400 | INFO     | sum of deviations: -8595581217.499998
[2026-02-04 04:42:15] 2026-02-04 03:41:06,401 | INFO     | mean x: 1770172447.5
[2026-02-04 04:42:15] 2026-02-04 03:41:06,401 | INFO     | mean y: 2357163.772727273
[2026-02-04 04:42:15] 2026-02-04 03:41:06,401 | INFO     | intersect: 36872111090.827934
[2026-02-04 04:42:15] 2026-02-04 03:41:06,401 | INFO     | chi2: 0.018620512785476592
[2026-02-04 04:42:15] 2026-02-04 03:41:06,401 | INFO     | current memory leak: -20.83 B/s (using 110 data points, chi2=0.02)
[2026-02-04 04:42:15] 2026-02-04 03:41:06,402 | INFO     | could have reported an average CPU frequency of 2678 MHz (8 samples)
[2026-02-04 04:42:15] 2026-02-04 03:41:06,402 | INFO     | ..............................
[2026-02-04 04:42:15] 2026-02-04 03:41:06,402 | INFO     | . Timing measurements:
[2026-02-04 04:42:15] 2026-02-04 03:41:06,402 | INFO     | . get job = 0 s
[2026-02-04 04:42:15] 2026-02-04 03:41:06,402 | INFO     | . initial setup = 8 s
[2026-02-04 04:42:15] 2026-02-04 03:41:06,402 | INFO     | . payload setup = 8 s
[2026-02-04 04:42:15] 2026-02-04 03:41:06,402 | INFO     | . stage-in = 0 s
[2026-02-04 04:42:15] 2026-02-04 03:41:06,403 | INFO     | . payload execution = 8564 s
[2026-02-04 04:42:15] 2026-02-04 03:41:06,403 | INFO     | . stage-out = 0 s
[2026-02-04 04:42:15] 2026-02-04 03:41:06,403 | INFO     | . log creation = 0 s
[2026-02-04 04:42:15] 2026-02-04 03:41:06,403 | INFO     | ..............................
[2026-02-04 04:42:15] 2026-02-04 03:41:06,519 | INFO     | 
[2026-02-04 04:42:15] 2026-02-04 03:41:06,519 | INFO     | job summary report
[2026-02-04 04:42:15] 2026-02-04 03:41:06,520 | INFO     | --------------------------------------------------
[2026-02-04 04:42:15] 2026-02-04 03:41:06,520 | INFO     | PanDA job id: 6994524146
[2026-02-04 04:42:15] 2026-02-04 03:41:06,520 | INFO     | task id: 48310749
[2026-02-04 04:42:15] 2026-02-04 03:41:06,520 | INFO     | errors: (none)
[2026-02-04 04:42:15] 2026-02-04 03:41:06,520 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 04:42:15] 2026-02-04 03:41:06,520 | INFO     | pilot state: finished 
[2026-02-04 04:42:15] 2026-02-04 03:41:06,520 | INFO     | transexitcode: 0
[2026-02-04 04:42:15] 2026-02-04 03:41:06,520 | INFO     | exeerrorcode: 0
[2026-02-04 04:42:15] 2026-02-04 03:41:06,520 | INFO     | exeerrordiag: 
[2026-02-04 04:42:15] 2026-02-04 03:41:06,520 | INFO     | exitcode: 0
[2026-02-04 04:42:15] 2026-02-04 03:41:06,521 | INFO     | exitmsg: OK
[2026-02-04 04:42:15] 2026-02-04 03:41:06,521 | INFO     | cpuconsumptiontime: 32661 s
[2026-02-04 04:42:15] 2026-02-04 03:41:06,521 | INFO     | nevents: 400
[2026-02-04 04:42:15] 2026-02-04 03:41:06,521 | INFO     | neventsw: 0
[2026-02-04 04:42:15] 2026-02-04 03:41:06,521 | INFO     | pid: 58717
[2026-02-04 04:42:15] 2026-02-04 03:41:06,521 | INFO     | pgrp: 58717
[2026-02-04 04:42:15] 2026-02-04 03:41:06,521 | INFO     | corecount: 4
[2026-02-04 04:42:15] 2026-02-04 03:41:06,521 | INFO     | event service: False
[2026-02-04 04:42:15] 2026-02-04 03:41:06,521 | INFO     | sizes: {0: 2277972, 1: 2278234, 11: 2278262, 8576: 2306645, 8577: 2306644, 8578: 2315720, 8579: 2315904, 8580: 2316098}
[2026-02-04 04:42:15] 2026-02-04 03:41:06,521 | INFO     | --------------------------------------------------
[2026-02-04 04:42:15] 2026-02-04 03:41:06,522 | INFO     | 
[2026-02-04 04:42:15] 2026-02-04 03:41:06,522 | INFO     | executing command: ls -lF /scratch/boinc/var/slot48/slots/0
[2026-02-04 04:42:15] 2026-02-04 03:41:06,557 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 04:42:15] 2026-02-04 03:41:06,558 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 04:42:15] 2026-02-04 03:41:06,558 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 04:42:15] 2026-02-04 03:41:06,558 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 04:42:15] 2026-02-04 03:41:06,558 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 04:42:15] 2026-02-04 03:41:06,558 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 04:42:15] 2026-02-04 03:41:06,558 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 04:42:15] 2026-02-04 03:41:06,558 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 04:42:15] 2026-02-04 03:41:06,558 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 04:42:15] 2026-02-04 03:41:06,559 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 04:42:15] 2026-02-04 03:41:06,559 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 04:42:15] 2026-02-04 03:41:06,559 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 04:42:15] 2026-02-04 03:41:06,559 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 04:42:15] 2026-02-04 03:41:06,559 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 04:42:15] 2026-02-04 03:41:06,559 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 04:42:15] 2026-02-04 03:41:06,559 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 04:42:15] 2026-02-04 03:41:06,559 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 04:42:15] 2026-02-04 03:41:06,559 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 04:42:15] 2026-02-04 03:41:06,559 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 04:42:15] 2026-02-04 03:41:06,559 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 04:42:15] 2026-02-04 03:41:06,560 | INFO     | job 6994524146 has completed (purged errors)
[2026-02-04 04:42:15] 2026-02-04 03:41:06,560 | INFO     | overall cleanup function is called
[2026-02-04 04:42:15] 2026-02-04 03:41:07,282 | INFO     | PID=53666 has CPU usage=15.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-04 04:42:15] 2026-02-04 03:41:07,282 | INFO     | .. there are 21 such processes running
[2026-02-04 04:42:15] 2026-02-04 03:41:07,571 | INFO     | --- collectZombieJob: --- 10, [58717]
[2026-02-04 04:42:15] 2026-02-04 03:41:07,571 | INFO     | zombie collector waiting for pid 58717
[2026-02-04 04:42:15] 2026-02-04 03:41:07,572 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 04:42:15] 2026-02-04 03:41:07,572 | INFO     | collected zombie processes
[2026-02-04 04:42:15] 2026-02-04 03:41:07,572 | INFO     | will attempt to kill all subprocesses of pid=58717
[2026-02-04 04:42:15] 2026-02-04 03:41:09,304 | WARNING  | process 58717 can no longer be monitored (due to stat problems) - aborting
[2026-02-04 04:42:15] 2026-02-04 03:41:09,416 | INFO     | process IDs to be killed: [58717] (in reverse order)
[2026-02-04 04:42:15] 2026-02-04 03:41:09,669 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 04:42:15] 2026-02-04 03:41:09,670 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 04:42:15] 2026-02-04 03:41:09,747 | INFO     | did not find any defunct processes belonging to 58717
[2026-02-04 04:42:15] 2026-02-04 03:41:09,823 | INFO     | did not find any defunct processes belonging to 58717
[2026-02-04 04:42:15] 2026-02-04 03:41:09,823 | INFO     | ready for new job
[2026-02-04 04:42:15] 2026-02-04 03:41:09,823 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 04:42:15] 2026-02-04 03:41:09,826 | INFO     | **************************************
[2026-02-04 04:42:15] 2026-02-04 03:41:09,828 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 04:42:15] 2026-02-04 03:41:09,829 | INFO     | **************************************
[2026-02-04 04:42:15] 2026-02-04 03:41:09,829 | INFO     | 
[2026-02-04 04:42:15] 2026-02-04 03:41:09,840 | INFO     | architecture information:
[2026-02-04 04:42:15] 2026-02-04 03:41:09,840 | INFO     | executing command: cat /etc/os-release
[2026-02-04 04:42:15] 2026-02-04 03:41:09,862 | INFO     | cat /etc/os-release:
[2026-02-04 04:42:15] NAME="CentOS Linux"
[2026-02-04 04:42:15] VERSION="7 (Core)"
[2026-02-04 04:42:15] ID="centos"
[2026-02-04 04:42:15] ID_LIKE="rhel fedora"
[2026-02-04 04:42:15] VERSION_ID="7"
[2026-02-04 04:42:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 04:42:15] ANSI_COLOR="0;31"
[2026-02-04 04:42:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 04:42:15] HOME_URL="https://www.centos.org/"
[2026-02-04 04:42:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 04:42:15] 
[2026-02-04 04:42:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 04:42:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 04:42:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 04:42:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 04:42:15] 
[2026-02-04 04:42:15] 2026-02-04 03:41:09,862 | INFO     | **************************************
[2026-02-04 04:42:15] 2026-02-04 03:41:10,011 | INFO     | using path: /scratch/boinc/var/slot48/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 04:42:15] 2026-02-04 03:41:10,013 | INFO     | skipping file size check of payload stdout file (/scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6994524146/payload.stdout) since it has not been created yet
[2026-02-04 04:42:15] 2026-02-04 03:41:10,013 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/0
[2026-02-04 04:42:15] 2026-02-04 03:41:10,034 | INFO     | sufficient remaining disk space (3268362108928 B)
[2026-02-04 04:42:15] 2026-02-04 03:41:10,034 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-02-04 04:42:15] 2026-02-04 03:41:10,035 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot48/slots/0/PanDA_Pilot-6994524146/HITS.48310749._004346.pool.root.1 since it does not exist
[2026-02-04 04:42:15] 2026-02-04 03:41:10,365 | INFO     | executing command: df -mP /scratch/boinc/var/slot48/slots/0
[2026-02-04 04:42:15] 2026-02-04 03:41:10,389 | INFO     | sufficient remaining disk space (3268361060352 B)
[2026-02-04 04:42:15] 2026-02-04 03:41:10,390 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 04:42:15] 2026-02-04 03:41:10,390 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 04:42:15] 2026-02-04 03:41:10,390 | INFO     | update_server=False
[2026-02-04 04:42:15] 2026-02-04 03:41:10,390 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 04:42:15] 2026-02-04 03:41:10,391 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 04:42:15] 2026-02-04 03:41:10,653 | INFO     | number of running child processes to parent process 58717: 1
[2026-02-04 04:42:15] 2026-02-04 03:41:10,653 | INFO     | maximum number of monitored processes: 6
[2026-02-04 04:42:15] 2026-02-04 03:41:10,653 | INFO     | aborting job monitoring since job object (job id=6994524146) has expired
[2026-02-04 04:42:15] 2026-02-04 03:41:10,653 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 04:42:15] 2026-02-04 03:41:10,653 | INFO     | will abort loop
[2026-02-04 04:42:15] 2026-02-04 03:41:10,805 | INFO     | all data control threads have been joined
[2026-02-04 04:42:15] 2026-02-04 03:41:11,191 | INFO     | all job control threads have been joined
[2026-02-04 04:42:15] 2026-02-04 03:41:11,395 | INFO     | [job] retrieve thread has finished
[2026-02-04 04:42:15] 2026-02-04 03:41:11,533 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 04:42:15] 2026-02-04 03:41:11,639 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 04:42:15] 2026-02-04 03:41:11,658 | INFO     | [job] job monitor thread has finished
[2026-02-04 04:42:15] 2026-02-04 03:41:11,690 | INFO     | all payload control threads have been joined
[2026-02-04 04:42:15] 2026-02-04 03:41:11,699 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 04:42:15] 2026-02-04 03:41:11,810 | INFO     | [data] control thread has finished
[2026-02-04 04:42:15] 2026-02-04 03:41:11,952 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 04:42:15] 2026-02-04 03:41:11,966 | INFO     | [job] validate thread has finished
[2026-02-04 04:42:15] 2026-02-04 03:41:12,134 | INFO     | [payload] failed_post thread has finished
[2026-02-04 04:42:15] 2026-02-04 03:41:12,196 | INFO     | [job] control thread has finished
[2026-02-04 04:42:15] 2026-02-04 03:41:12,389 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 04:42:15] 2026-02-04 03:41:12,396 | INFO     | [data] copytool_out thread has finished
[2026-02-04 04:42:15] 2026-02-04 03:41:12,538 | INFO     | [job] queue monitor thread has finished
[2026-02-04 04:42:15] 2026-02-04 03:41:12,654 | INFO     | [data] copytool_in thread has finished
[2026-02-04 04:42:15] 2026-02-04 03:41:12,695 | INFO     | [payload] control thread has finished
[2026-02-04 04:42:15] 2026-02-04 03:41:12,860 | INFO     | [payload] validate_post thread has finished
[2026-02-04 04:42:15] 2026-02-04 03:41:15,644 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 04:42:15] 2026-02-04 03:41:21,252 | INFO     | job.realtimelogging is not enabled
[2026-02-04 04:42:15] 2026-02-04 03:41:22,257 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 04:42:15] 2026-02-04 03:41:40,193 | INFO     | PID=53666 has CPU usage=14.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-04 04:42:15] 2026-02-04 03:41:40,193 | INFO     | .. there are 21 such processes running
[2026-02-04 04:42:15] 2026-02-04 03:41:40,194 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 04:42:15] 2026-02-04 03:41:40,194 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 04:42:15] 2026-02-04 03:41:40,194 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 04:42:15] 2026-02-04 03:42:09,163 | INFO     | [monitor] cgroup control has ended
[2026-02-04 04:42:15] 2026-02-04 03:42:10,114 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22870291707712)>', '<ExcThread(monitor, started 22870054156032)>']
[2026-02-04 04:42:15] 2026-02-04 03:42:10,348 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 04:42:15] 2026-02-04 03:42:10,348 | INFO     | [monitor] control thread has ended
[2026-02-04 04:42:15] 2026-02-04 03:42:15,139 | INFO     | all workflow threads have been joined
[2026-02-04 04:42:15] 2026-02-04 03:42:15,139 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 04:42:15] 2026-02-04 03:42:15,140 | INFO     | traces error code: 0
[2026-02-04 04:42:15] 2026-02-04 03:42:15,140 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 04:42:15] 2026-02-04 03:42:15,350 [wrapper] ==== pilot stdout END ====
[2026-02-04 04:42:15] 2026-02-04 03:42:15,355 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 04:42:15] 2026-02-04 03:42:15,359 [wrapper] pilotpid: 53666
[2026-02-04 04:42:15] 2026-02-04 03:42:15,363 [wrapper] Pilot exit status: 0
[2026-02-04 04:42:15] 2026-02-04 03:42:15,378 [wrapper] pandaids: 6994524146
[2026-02-04 04:42:15] 2026-02-04 03:42:15,540 [wrapper] cleanup supervisor_pilot  345908 53667
[2026-02-04 04:42:15] 2026-02-04 03:42:15,545 [wrapper] Test setup, not cleaning
[2026-02-04 04:42:15] 2026-02-04 03:42:15,549 [wrapper] apfmon messages muted
[2026-02-04 04:42:15] 2026-02-04 03:42:15,553 [wrapper] ==== wrapper stdout END ====
[2026-02-04 04:42:15] 2026-02-04 03:42:15,556 [wrapper] ==== wrapper stderr END ====
[2026-02-04 04:42:15]  *** Error codes and diagnostics ***
[2026-02-04 04:42:15]     "exeErrorCode": 0,
[2026-02-04 04:42:15]     "exeErrorDiag": "",
[2026-02-04 04:42:15]     "pilotErrorCode": 0,
[2026-02-04 04:42:15]     "pilotErrorDiag": "",
[2026-02-04 04:42:15]  *** Listing of results directory ***
[2026-02-04 04:42:15] total 663788
[2026-02-04 04:42:15] -rw-r--r-- 1 boinc boinc    584422 Feb  3 22:56 pilot3.tar.gz
[2026-02-04 04:42:15] -rwx------ 1 boinc boinc     36322 Feb  3 22:57 runpilot2-wrapper.sh
[2026-02-04 04:42:15] -rw-r--r-- 1 boinc boinc      5111 Feb  3 22:58 queuedata.json
[2026-02-04 04:42:15] -rw-r--r-- 1 boinc boinc       100 Feb  4 02:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 04:42:15] -rwxr-xr-x 1 boinc boinc      7986 Feb  4 02:17 run_atlas
[2026-02-04 04:42:15] -rw-r--r-- 1 boinc boinc       105 Feb  4 02:17 job.xml
[2026-02-04 04:42:15] -rw-r--r-- 1 boinc boinc      6687 Feb  4 02:17 init_data.xml
[2026-02-04 04:42:15] -rw-r--r-- 2 boinc boinc 493536594 Feb  4 02:17 EVNT.48310747._000087.pool.root.1
[2026-02-04 04:42:15] -rw-r--r-- 2 boinc boinc     15845 Feb  4 02:17 start_atlas.sh
[2026-02-04 04:42:15] drwxrwx--x 2 boinc boinc      4096 Feb  4 02:17 shared
[2026-02-04 04:42:15] -rw-r--r-- 2 boinc boinc    597755 Feb  4 02:17 input.tar.gz
[2026-02-04 04:42:15] -rw-r--r-- 1 boinc boinc         0 Feb  4 02:17 boinc_lockfile
[2026-02-04 04:42:15] -rw-r--r-- 1 boinc boinc      2523 Feb  4 02:17 pandaJob.out
[2026-02-04 04:42:15] -rw------- 1 boinc boinc   1009228 Feb  4 02:17 agis_schedconf.cvmfs.json
[2026-02-04 04:42:15] -rw------- 1 boinc boinc   1511668 Feb  4 02:17 agis_ddmendpoints.agis.ALL.json
[2026-02-04 04:42:15] -rw------- 1 boinc boinc       442 Feb  4 02:17 workernode_map.json
[2026-02-04 04:42:15] drwx------ 5 boinc boinc      4096 Feb  4 02:17 pilot3
[2026-02-04 04:42:15] -rw-r--r-- 1 boinc boinc       530 Feb  4 04:40 boinc_task_state.xml
[2026-02-04 04:42:15] -rw------- 1 boinc boinc 179095109 Feb  4 04:40 HITS.48310749._004346.pool.root.1
[2026-02-04 04:42:15] -rw------- 1 boinc boinc      1029 Feb  4 04:41 memory_monitor_summary.json
[2026-02-04 04:42:15] -rw------- 1 boinc boinc    359137 Feb  4 04:41 log.48310749._004346.job.log.tgz.1
[2026-02-04 04:42:15] -rw------- 1 boinc boinc      6357 Feb  4 04:41 heartbeat.json
[2026-02-04 04:42:15] -rw------- 1 boinc boinc        95 Feb  4 04:41 pilot_heartbeat.json
[2026-02-04 04:42:15] -rw-r--r-- 1 boinc boinc      8192 Feb  4 04:41 boinc_mmap_file
[2026-02-04 04:42:15] -rw-r--r-- 1 boinc boinc        27 Feb  4 04:41 wrapper_checkpoint.txt
[2026-02-04 04:42:15] -rw------- 1 boinc boinc      5994 Feb  4 04:42 pilotlog.txt
[2026-02-04 04:42:15] -rw------- 1 boinc boinc   1214940 Feb  4 04:42 log.48310749._004346.job.log.1
[2026-02-04 04:42:15] -rw------- 1 boinc boinc       357 Feb  4 04:42 output.list
[2026-02-04 04:42:15] -rw-r--r-- 1 boinc boinc       620 Feb  4 04:42 runtime_log
[2026-02-04 04:42:15] -rw------- 1 boinc boinc   1587200 Feb  4 04:42 result.tar.gz
[2026-02-04 04:42:15] -rw-r--r-- 1 boinc boinc      9204 Feb  4 04:42 runtime_log.err
[2026-02-04 04:42:15] -rw------- 1 boinc boinc       662 Feb  4 04:42 9JJODmwZd78nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmjvVKDmCPi1Bn.diag
[2026-02-04 04:42:15] -rw-r--r-- 1 boinc boinc     21256 Feb  4 04:42 stderr.txt
[2026-02-04 04:42:15] HITS file was successfully produced:
[2026-02-04 04:42:15] -rw------- 1 boinc boinc 179095109 Feb  4 04:40 shared/HITS.pool.root.1
[2026-02-04 04:42:15]  *** Contents of shared directory: ***
[2026-02-04 04:42:15] total 659032
[2026-02-04 04:42:15] -rw-r--r-- 2 boinc boinc 493536594 Feb  4 02:17 ATLAS.root_0
[2026-02-04 04:42:15] -rw-r--r-- 2 boinc boinc     15845 Feb  4 02:17 start_atlas.sh
[2026-02-04 04:42:15] -rw-r--r-- 2 boinc boinc    597755 Feb  4 02:17 input.tar.gz
[2026-02-04 04:42:15] -rw------- 1 boinc boinc 179095109 Feb  4 04:40 HITS.pool.root.1
[2026-02-04 04:42:15] -rw------- 1 boinc boinc   1587200 Feb  4 04:42 result.tar.gz
04:42:17 (49671): run_atlas exited; CPU time 33180.480936
04:42:17 (49671): called boinc_finish(0)

</stderr_txt>
]]>

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