Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:27:48 (3050242): wrapper (7.7.26015): starting
16:27:48 (3050242): wrapper: running run_atlas (--nthreads 12)
[2026-02-03 16:27:48] Arguments: --nthreads 12
[2026-02-03 16:27:48] Threads: 12
[2026-02-03 16:27:48] Checking for CVMFS
[2026-02-03 16:27:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-03 16:27:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-03 16:27:48] Running cvmfs_config stat atlas.cern.ch
[2026-02-03 16:27:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-03 16:27:49] 2.11.5.0 886365 93271 156720 155849 0 674 39147246 45568001 17793 130560 0 771951449 99.818 428908240 22897 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2026-02-03 16:27:49] CVMFS is ok
[2026-02-03 16:27:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-03 16:27:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-03 16:27:49] Further information can be found at the LHC@home message board.
[2026-02-03 16:27:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 16:27:49] Checking for apptainer binary...
[2026-02-03 16:27:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-03 16:27:49] Running /usr/bin/apptainer --version
[2026-02-03 16:27:49] apptainer version 1.4.1-1.el9
[2026-02-03 16:27:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 16:27:49] wns0063.triumf.lcg
[2026-02-03 16:27:49] apptainer works
[2026-02-03 16:27:49] Set ATHENA_PROC_NUMBER=12
[2026-02-03 16:27:49] Set ATHENA_CORE_NUMBER=12
[2026-02-03 16:27:49] Starting ATLAS job with PandaID=7000308859
[2026-02-03 16:27:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-03 16:31:11]  *** The last 200 lines of the pilot log: ***
[2026-02-03 16:31:11] 2026-02-04 00:30:37,713 | INFO     | could have reported an average CPU frequency of 2798 MHz (4 samples)
[2026-02-03 16:31:11] 2026-02-04 00:30:37,713 | INFO     | ..............................
[2026-02-03 16:31:11] 2026-02-04 00:30:37,713 | INFO     | . Timing measurements:
[2026-02-03 16:31:11] 2026-02-04 00:30:37,713 | INFO     | . get job = 0 s
[2026-02-03 16:31:11] 2026-02-04 00:30:37,713 | INFO     | . initial setup = 7 s
[2026-02-03 16:31:11] 2026-02-04 00:30:37,713 | INFO     | . payload setup = 4 s
[2026-02-03 16:31:11] 2026-02-04 00:30:37,713 | INFO     | . stage-in = 0 s
[2026-02-03 16:31:11] 2026-02-04 00:30:37,713 | INFO     | . payload execution = 16 s
[2026-02-03 16:31:11] 2026-02-04 00:30:37,713 | INFO     | . stage-out = 0 s
[2026-02-03 16:31:11] 2026-02-04 00:30:37,713 | INFO     | . log creation = 0 s
[2026-02-03 16:31:11] 2026-02-04 00:30:37,713 | INFO     | ..............................
[2026-02-03 16:31:11] 2026-02-04 00:30:37,713 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-03 16:31:11] 2026-02-04 00:30:37,714 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7000308859/pilotlog.txt
[2026-02-03 16:31:11] 2026-02-04 00:30:37,726 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-03 16:31:11] - Log from pilotlog.txt -
[2026-02-03 16:31:11] 2026-02-04 00:30:37,712 | INFO     | extracted standard memory fields from prmon json
[2026-02-03 16:31:11] 2026-02-04 00:30:37,712 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-03 16:31:11] 2026-02-04 00:30:37,712 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-03 16:31:11] 2026-02-04 00:30:37,712 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-03 16:31:11] 2026-02-04 00:30:37,712 | WARNING  | found no stored workdir sizes
[2026-02-03 16:31:11] 2026-02-04 00:30:37,712 | INFO     | will not add max space = 0 B to job metrics
[2026-02-03 16:31:11] 2026-02-04 00:30:37,713 | WARNING  | wrong length of table data, x=[1770164904.0], y=[873.0] (must be same and length>=4)
[2026-02-03 16:31:11] 2026-02-04 00:30:37,713 | INFO     | could have reported an average CPU frequency of 2798 MHz (4 samples)
[2026-02-03 16:31:11] 2026-02-04 00:30:37,713 | INFO     | ..............................
[2026-02-03 16:31:11] 2026-02-04 00:30:37,713 | INFO     | . Timing measurements:
[2026-02-03 16:31:11] 2026-02-04 00:30:37,713 | INFO     | . get job = 0 s
[2026-02-03 16:31:11] 2026-02-04 00:30:37,713 | INFO     | . initial setup = 7 s
[2026-02-03 16:31:11] 2026-02-04 00:30:37,713 | INFO     | . payload setup = 4 s
[2026-02-03 16:31:11] 2026-02-04 00:30:37,713 | INFO     | . stage-in = 0 s
[2026-02-03 16:31:11] 2026-02-04 00:30:37,713 | INFO     | . payload execution = 16 s
[2026-02-03 16:31:11] 2026-02-04 00:30:37,713 | INFO     | . stage-out = 0 s
[2026-02-03 16:31:11] 2026-02-04 00:30:37,713 | INFO     | . log creation = 0 s
[2026-02-03 16:31:11] 2026-02-04 00:30:37,713 | INFO     | ..............................
[2026-02-03 16:31:11] 2026-02-04 00:30:37,713 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-03 16:31:11] 2026-02-04 00:30:37,714 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7000308859/pilotlog.txt
[2026-02-03 16:31:11] 2026-02-04 00:30:37,726 | WARNING  | 
[2026-02-03 16:31:11] [begin log extracts]
[2026-02-03 16:31:11] - Log from pilotlog.txt -
[2026-02-03 16:31:11] 2026-02-04 00:30:37,712 | INFO     | extracted standard memory fields from prmon json
[2026-02-03 16:31:11] 2026-02-04 00:30:37,712 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-03 16:31:11] 2026-02-04 00:30:37,712 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-03 16:31:11] 2026-02-04 00:30:37,712 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-03 16:31:11] 2026-02-04 00:30:37,712 | WARNING  | found no stored workdir sizes
[2026-02-03 16:31:11] 2026-02-04 00:30:37,712 | INFO     | will not add max space = 0 B to job metrics
[2026-02-03 16:31:11] 2026-02-04 00:30:37,713 | WARNING  | wrong length of table data, x=[1770164904.0], y=[873.0] (must be same and length>=4)
[2026-02-03 16:31:11] 2026-02-04 00:30:37,713 | INFO     | could have reported an average CPU frequency of 2798 MHz (4 samples)
[2026-02-03 16:31:11] 2026-02-04 00:30:37,713 | INFO     | ..............................
[2026-02-03 16:31:11] 2026-02-04 00:30:37,713 | INFO     | . Timing measurements:
[2026-02-03 16:31:11] 2026-02-04 00:30:37,713 | INFO     | . get job = 0 s
[2026-02-03 16:31:11] 2026-02-04 00:30:37,713 | INFO     | . initial setup = 7 s
[2026-02-03 16:31:11] 2026-02-04 00:30:37,713 | INFO     | . payload setup = 4 s
[2026-02-03 16:31:11] 2026-02-04 00:30:37,713 | INFO     | . stage-in = 0 s
[2026-02-03 16:31:11] 2026-02-04 00:30:37,713 | INFO     | . payload execution = 16 s
[2026-02-03 16:31:11] 2026-02-04 00:30:37,713 | INFO     | . stage-out = 0 s
[2026-02-03 16:31:11] 2026-02-04 00:30:37,713 | INFO     | . log creation = 0 s
[2026-02-03 16:31:11] 2026-02-04 00:30:37,713 | INFO     | ..............................
[2026-02-03 16:31:11] 2026-02-04 00:30:37,713 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-03 16:31:11] 2026-02-04 00:30:37,714 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7000308859/pilotlog.txt
[2026-02-03 16:31:11] [end log extracts]
[2026-02-03 16:31:11] 2026-02-04 00:30:37,726 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-03 16:31:11] 2026-02-04 00:30:37,727 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-03 16:31:11] 2026-02-04 00:30:38,137 | INFO     | 
[2026-02-03 16:31:11] 2026-02-04 00:30:38,137 | INFO     | job summary report
[2026-02-03 16:31:11] 2026-02-04 00:30:38,137 | INFO     | --------------------------------------------------
[2026-02-03 16:31:11] 2026-02-04 00:30:38,138 | INFO     | PanDA job id: 7000308859
[2026-02-03 16:31:11] 2026-02-04 00:30:38,138 | INFO     | task id: 48317892
[2026-02-03 16:31:11] 2026-02-04 00:30:38,138 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-03 16:28:30,953 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-03 16:31:11] 2026-02-04 00:30:38,138 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-03 16:31:11] 2026-02-04 00:30:38,138 | INFO     | pilot state: failed 
[2026-02-03 16:31:11] 2026-02-04 00:30:38,138 | INFO     | transexitcode: 65
[2026-02-03 16:31:11] 2026-02-04 00:30:38,138 | INFO     | exeerrorcode: 65
[2026-02-03 16:31:11] 2026-02-04 00:30:38,138 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-03 16:31:11] 2026-02-04 00:30:38,138 | INFO     | exitcode: 65
[2026-02-03 16:31:11] 2026-02-04 00:30:38,138 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-03 16:31:11] 2026-02-04 00:30:38,138 | INFO     | cpuconsumptiontime: 13 s
[2026-02-03 16:31:11] 2026-02-04 00:30:38,138 | INFO     | nevents: 0
[2026-02-03 16:31:11] 2026-02-04 00:30:38,138 | INFO     | neventsw: 0
[2026-02-03 16:31:11] 2026-02-04 00:30:38,138 | INFO     | pid: 3066533
[2026-02-03 16:31:11] 2026-02-04 00:30:38,138 | INFO     | pgrp: 3066533
[2026-02-03 16:31:11] 2026-02-04 00:30:38,138 | INFO     | corecount: 12
[2026-02-03 16:31:11] 2026-02-04 00:30:38,138 | INFO     | event service: False
[2026-02-03 16:31:11] 2026-02-04 00:30:38,138 | INFO     | sizes: {0: 2277846, 1: 2278250, 11: 2278250, 25: 2305767, 27: 2305767, 144: 2305933}
[2026-02-03 16:31:11] 2026-02-04 00:30:38,138 | INFO     | --------------------------------------------------
[2026-02-03 16:31:11] 2026-02-04 00:30:38,138 | INFO     | 
[2026-02-03 16:31:11] 2026-02-04 00:30:38,138 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-03 16:31:11] 2026-02-04 00:30:38,153 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-03 16:31:11] 2026-02-04 00:30:38,153 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-03 16:31:11] 2026-02-04 00:30:38,154 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-03 16:31:11] 2026-02-04 00:30:38,154 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-03 16:31:11] 2026-02-04 00:30:38,154 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-03 16:31:11] 2026-02-04 00:30:38,154 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-03 16:31:11] 2026-02-04 00:30:38,154 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-03 16:31:11] 2026-02-04 00:30:38,154 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-03 16:31:11] 2026-02-04 00:30:38,154 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-03 16:31:11] 2026-02-04 00:30:38,154 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-03 16:31:11] 2026-02-04 00:30:38,154 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-03 16:31:11] 2026-02-04 00:30:38,154 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-03 16:31:11] 2026-02-04 00:30:38,154 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-03 16:31:11] 2026-02-04 00:30:38,154 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-03 16:31:11] 2026-02-04 00:30:38,154 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-03 16:31:11] 2026-02-04 00:30:38,154 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-03 16:31:11] 2026-02-04 00:30:38,154 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-03 16:31:11] 2026-02-04 00:30:38,154 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-03 16:31:11] 2026-02-04 00:30:38,154 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-03 16:31:11] 2026-02-04 00:30:38,154 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-03 16:31:11] 2026-02-04 00:30:38,155 | INFO     | job 7000308859 has completed (purged errors)
[2026-02-03 16:31:11] 2026-02-04 00:30:38,155 | INFO     | overall cleanup function is called
[2026-02-03 16:31:11] 2026-02-04 00:30:38,817 | INFO     | PID=3054822 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-03 16:31:11] 2026-02-04 00:30:38,818 | INFO     | .. there are 29 such processes running
[2026-02-03 16:31:11] 2026-02-04 00:30:39,163 | INFO     | --- collectZombieJob: --- 10, [3066533]
[2026-02-03 16:31:11] 2026-02-04 00:30:39,163 | INFO     | zombie collector waiting for pid 3066533
[2026-02-03 16:31:11] 2026-02-04 00:30:39,163 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-03 16:31:11] 2026-02-04 00:30:39,163 | INFO     | collected zombie processes
[2026-02-03 16:31:11] 2026-02-04 00:30:39,163 | INFO     | will attempt to kill all subprocesses of pid=3066533
[2026-02-03 16:31:11] 2026-02-04 00:30:39,346 | INFO     | process IDs to be killed: [3066533] (in reverse order)
[2026-02-03 16:31:11] 2026-02-04 00:30:39,415 | WARNING  | found no corresponding commands to process id(s)
[2026-02-03 16:31:11] 2026-02-04 00:30:39,416 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-03 16:31:11] 2026-02-04 00:30:39,423 | INFO     | did not find any defunct processes belonging to 3066533
[2026-02-03 16:31:11] 2026-02-04 00:30:39,430 | INFO     | did not find any defunct processes belonging to 3066533
[2026-02-03 16:31:11] 2026-02-04 00:30:39,430 | INFO     | ready for new job
[2026-02-03 16:31:11] 2026-02-04 00:30:39,430 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-03 16:31:11] 2026-02-04 00:30:39,431 | INFO     | **************************************
[2026-02-03 16:31:11] 2026-02-04 00:30:39,431 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-03 16:31:11] 2026-02-04 00:30:39,431 | INFO     | **************************************
[2026-02-03 16:31:11] 2026-02-04 00:30:39,432 | INFO     | 
[2026-02-03 16:31:11] 2026-02-04 00:30:39,433 | INFO     | architecture information:
[2026-02-03 16:31:11] 2026-02-04 00:30:39,434 | INFO     | executing command: cat /etc/os-release
[2026-02-03 16:31:11] 2026-02-04 00:30:39,443 | INFO     | cat /etc/os-release:
[2026-02-03 16:31:11] NAME="CentOS Linux"
[2026-02-03 16:31:11] VERSION="7 (Core)"
[2026-02-03 16:31:11] ID="centos"
[2026-02-03 16:31:11] ID_LIKE="rhel fedora"
[2026-02-03 16:31:11] VERSION_ID="7"
[2026-02-03 16:31:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-03 16:31:11] ANSI_COLOR="0;31"
[2026-02-03 16:31:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-03 16:31:11] HOME_URL="https://www.centos.org/"
[2026-02-03 16:31:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-03 16:31:11] 
[2026-02-03 16:31:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-03 16:31:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-03 16:31:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-03 16:31:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-03 16:31:11] 
[2026-02-03 16:31:11] 2026-02-04 00:30:39,444 | INFO     | **************************************
[2026-02-03 16:31:11] 2026-02-04 00:30:39,946 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-03 16:31:11] 2026-02-04 00:30:39,958 | INFO     | sufficient remaining disk space (1894287147008 B)
[2026-02-03 16:31:11] 2026-02-04 00:30:39,959 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-03 16:31:11] 2026-02-04 00:30:39,959 | INFO     | current server update state: UPDATING_FINAL
[2026-02-03 16:31:11] 2026-02-04 00:30:39,959 | INFO     | update_server=False
[2026-02-03 16:31:11] 2026-02-04 00:30:39,959 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-03 16:31:11] 2026-02-04 00:30:39,959 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-03 16:31:11] 2026-02-04 00:30:40,123 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-03 16:31:11] 2026-02-04 00:30:40,200 | INFO     | all job control threads have been joined
[2026-02-03 16:31:11] 2026-02-04 00:30:40,332 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-03 16:31:11] 2026-02-04 00:30:40,332 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-03 16:31:11] 2026-02-04 00:30:40,333 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-03 16:31:11] 2026-02-04 00:30:40,333 | INFO     | will abort loop
[2026-02-03 16:31:11] 2026-02-04 00:30:40,956 | INFO     | all data control threads have been joined
[2026-02-03 16:31:11] 2026-02-04 00:30:40,962 | INFO     | [job] retrieve thread has finished
[2026-02-03 16:31:11] 2026-02-04 00:30:41,022 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-03 16:31:11] 2026-02-04 00:30:41,107 | INFO     | [data] copytool_in thread has finished
[2026-02-03 16:31:11] 2026-02-04 00:30:41,171 | INFO     | all payload control threads have been joined
[2026-02-03 16:31:11] 2026-02-04 00:30:41,205 | INFO     | [job] control thread has finished
[2026-02-03 16:31:11] 2026-02-04 00:30:41,341 | INFO     | [job] job monitor thread has finished
[2026-02-03 16:31:11] 2026-02-04 00:30:41,376 | INFO     | [payload] execute_payloads thread has finished
[2026-02-03 16:31:11] 2026-02-04 00:30:41,560 | INFO     | [payload] failed_post thread has finished
[2026-02-03 16:31:11] 2026-02-04 00:30:41,962 | INFO     | [data] control thread has finished
[2026-02-03 16:31:11] 2026-02-04 00:30:42,134 | INFO     | [data] copytool_out thread has finished
[2026-02-03 16:31:11] 2026-02-04 00:30:42,176 | INFO     | [payload] control thread has finished
[2026-02-03 16:31:11] 2026-02-04 00:30:42,206 | INFO     | [job] validate thread has finished
[2026-02-03 16:31:11] 2026-02-04 00:30:42,354 | INFO     | [job] create_data_payload thread has finished
[2026-02-03 16:31:11] 2026-02-04 00:30:42,463 | INFO     | [payload] validate_pre thread has finished
[2026-02-03 16:31:11] 2026-02-04 00:30:42,465 | INFO     | [payload] validate_post thread has finished
[2026-02-03 16:31:11] 2026-02-04 00:30:42,797 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-03 16:31:11] 2026-02-04 00:30:43,802 | INFO     | [job] queue monitor thread has finished
[2026-02-03 16:31:11] 2026-02-04 00:30:43,972 | INFO     | [data] queue_monitor thread has finished
[2026-02-03 16:31:11] 2026-02-04 00:31:02,928 | INFO     | [monitor] cgroup control has ended
[2026-02-03 16:31:11] 2026-02-04 00:31:04,530 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140086731237184)>', '<ExcThread(monitor, started 140086410712832)>']
[2026-02-03 16:31:11] 2026-02-04 00:31:09,556 | INFO     | all workflow threads have been joined
[2026-02-03 16:31:11] 2026-02-04 00:31:09,556 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-03 16:31:11] 2026-02-04 00:31:09,556 | INFO     | traces error code: 0
[2026-02-03 16:31:11] 2026-02-04 00:31:09,556 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-03 16:31:11] 2026-02-04 00:31:11,144 | INFO     | PID=3054822 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-03 16:31:11] 2026-02-04 00:31:11,144 | INFO     | .. there are 29 such processes running
[2026-02-03 16:31:11] 2026-02-04 00:31:11,144 | INFO     | found 0 job(s) in 20 queues
[2026-02-03 16:31:11] 2026-02-04 00:31:11,145 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-03 16:31:11] 2026-02-04 00:31:11,145 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-03 16:31:11] 2026-02-04 00:31:11,145 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-03 16:31:11] 2026-02-04 00:31:11,145 | INFO     | [monitor] control thread has ended
[2026-02-03 16:31:11] 2026-02-04 00:31:11,262 [wrapper] ==== pilot stdout END ====
[2026-02-03 16:31:11] 2026-02-04 00:31:11,264 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-03 16:31:11] 2026-02-04 00:31:11,266 [wrapper] pilotpid: 3054822
[2026-02-03 16:31:11] 2026-02-04 00:31:11,267 [wrapper] Pilot exit status: 0
[2026-02-03 16:31:11] 2026-02-04 00:31:11,275 [wrapper] pandaids: 7000308859
[2026-02-03 16:31:11] 2026-02-04 00:31:11,317 [wrapper] cleanup supervisor_pilot 3054835 3054823
[2026-02-03 16:31:11] 2026-02-04 00:31:11,319 [wrapper] Test setup, not cleaning
[2026-02-03 16:31:11] 2026-02-04 00:31:11,320 [wrapper] apfmon messages muted
[2026-02-03 16:31:11] 2026-02-04 00:31:11,322 [wrapper] ==== wrapper stdout END ====
[2026-02-03 16:31:11] 2026-02-04 00:31:11,324 [wrapper] ==== wrapper stderr END ====
[2026-02-03 16:31:11]  *** Error codes and diagnostics ***
[2026-02-03 16:31:11]     "exeErrorCode": 65,
[2026-02-03 16:31:11]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-03 16:31:11]     "pilotErrorCode": 1305,
[2026-02-03 16:31:11]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-03 16:31:11]  *** Listing of results directory ***
[2026-02-03 16:31:11] total 488340
[2026-02-03 16:31:11] -rw-r--r--. 1 boinc boinc      5111 Feb  3 13:56 queuedata.json
[2026-02-03 16:31:11] -rw-r--r--. 1 boinc boinc    584422 Feb  3 13:56 pilot3.tar.gz
[2026-02-03 16:31:11] -rwx------. 1 boinc boinc     36322 Feb  3 13:56 runpilot2-wrapper.sh
[2026-02-03 16:31:11] -rw-r--r--. 1 boinc boinc       100 Feb  3 16:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-03 16:31:11] -rwxr-xr-x. 1 boinc boinc      7986 Feb  3 16:27 run_atlas
[2026-02-03 16:31:11] -rw-r--r--. 1 boinc boinc       105 Feb  3 16:27 job.xml
[2026-02-03 16:31:11] -rw-r--r--. 2 boinc boinc 495922675 Feb  3 16:27 EVNT.48317889._000259.pool.root.1
[2026-02-03 16:31:11] -rw-r--r--. 1 boinc boinc      6594 Feb  3 16:27 init_data.xml
[2026-02-03 16:31:11] -rw-r--r--. 2 boinc boinc     15845 Feb  3 16:27 start_atlas.sh
[2026-02-03 16:31:11] drwxrwx--x. 2 boinc boinc      4096 Feb  3 16:27 shared
[2026-02-03 16:31:11] -rw-r--r--. 2 boinc boinc    597754 Feb  3 16:27 input.tar.gz
[2026-02-03 16:31:11] -rw-r--r--. 1 boinc boinc         0 Feb  3 16:27 boinc_lockfile
[2026-02-03 16:31:11] -rw-r--r--. 1 boinc boinc      2523 Feb  3 16:27 pandaJob.out
[2026-02-03 16:31:11] -rw-------. 1 boinc boinc   1009228 Feb  3 16:27 agis_schedconf.cvmfs.json
[2026-02-03 16:31:11] -rw-------. 1 boinc boinc   1511668 Feb  3 16:27 agis_ddmendpoints.agis.ALL.json
[2026-02-03 16:31:11] -rw-------. 1 boinc boinc       444 Feb  3 16:28 workernode_map.json
[2026-02-03 16:31:11] drwx------. 5 boinc boinc      4096 Feb  3 16:28 pilot3
[2026-02-03 16:31:11] -rw-------. 1 boinc boinc       966 Feb  3 16:28 memory_monitor_summary.json
[2026-02-03 16:31:11] -rw-------. 1 boinc boinc     20705 Feb  3 16:28 log.48317892._013560.job.log.tgz.1
[2026-02-03 16:31:11] -rw-------. 1 boinc boinc      7007 Feb  3 16:30 heartbeat.json
[2026-02-03 16:31:11] -rw-r--r--. 1 boinc boinc       524 Feb  3 16:30 boinc_task_state.xml
[2026-02-03 16:31:11] -rw-r--r--. 1 boinc boinc      8192 Feb  3 16:31 boinc_mmap_file
[2026-02-03 16:31:11] -rw-r--r--. 1 boinc boinc        22 Feb  3 16:31 wrapper_checkpoint.txt
[2026-02-03 16:31:11] -rw-------. 1 boinc boinc        95 Feb  3 16:31 pilot_heartbeat.json
[2026-02-03 16:31:11] -rw-------. 1 boinc boinc       823 Feb  3 16:31 pilotlog.txt
[2026-02-03 16:31:11] -rw-------. 1 boinc boinc     80080 Feb  3 16:31 log.48317892._013560.job.log.1
[2026-02-03 16:31:11] -rw-------. 1 boinc boinc       188 Feb  3 16:31 output.list
[2026-02-03 16:31:11] -rw-r--r--. 1 boinc boinc       620 Feb  3 16:31 runtime_log
[2026-02-03 16:31:11] -rw-------. 1 boinc boinc    122880 Feb  3 16:31 result.tar.gz
[2026-02-03 16:31:11] -rw-r--r--. 1 boinc boinc      8635 Feb  3 16:31 runtime_log.err
[2026-02-03 16:31:11] -rw-------. 1 boinc boinc       645 Feb  3 16:31 Bp5KDmlYd78n9Rq4apOajLDm4fhM0noT9bVooX4SDmwSVKDmOG0VVn.diag
[2026-02-03 16:31:11] -rw-r--r--. 1 boinc boinc     21730 Feb  3 16:31 stderr.txt
[2026-02-03 16:31:11] No HITS result produced
[2026-02-03 16:31:11]  *** Contents of shared directory: ***
[2026-02-03 16:31:11] total 485024
[2026-02-03 16:31:11] -rw-r--r--. 2 boinc boinc 495922675 Feb  3 16:27 ATLAS.root_0
[2026-02-03 16:31:11] -rw-r--r--. 2 boinc boinc     15845 Feb  3 16:27 start_atlas.sh
[2026-02-03 16:31:11] -rw-r--r--. 2 boinc boinc    597754 Feb  3 16:27 input.tar.gz
[2026-02-03 16:31:11] -rw-------. 1 boinc boinc    122880 Feb  3 16:31 result.tar.gz
16:31:13 (3050242): run_atlas exited; CPU time 16.622318
16:31:13 (3050242): called boinc_finish(0)

</stderr_txt>
]]>

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