Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:21:35 (1493025): wrapper (7.7.26015): starting
00:21:35 (1493025): wrapper: running run_atlas (--nthreads 4)
[2026-02-04 00:21:35] Arguments: --nthreads 4
[2026-02-04 00:21:35] Threads: 4
[2026-02-04 00:21:35] Checking for CVMFS
[2026-02-04 00:21:35] No cvmfs_config command found, will try listing directly
[2026-02-04 00:21:35] CVMFS is ok
[2026-02-04 00:21:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-04 00:21:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-04 00:21:35] Further information can be found at the LHC@home message board.
[2026-02-04 00:21:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 00:21:35] Checking for apptainer binary...
[2026-02-04 00:21:35] which: no apptainer in ((null))
[2026-02-04 00:21:35] apptainer is not installed, using version from CVMFS
[2026-02-04 00:21:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 00:21:36] WARNING: Environment variable TMPDIR already has value [/var/lib/boinc/var/slot28/slots/2/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2026-02-04 00:21:36] apptainer works
[2026-02-04 00:21:36] Set ATHENA_PROC_NUMBER=4
[2026-02-04 00:21:36] Set ATHENA_CORE_NUMBER=4
[2026-02-04 00:21:36] Starting ATLAS job with PandaID=6999845701
[2026-02-04 00:21:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/var/slot28/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 04:16:23]  *** The last 200 lines of the pilot log: ***
[2026-02-04 04:16:23] 2026-02-04 03:15:26,012 | INFO     | job 6999845701 has finished - writing final server update
[2026-02-04 04:16:23] 2026-02-04 03:15:26,012 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1319075/.job.ad'
[2026-02-04 04:16:23] 2026-02-04 03:15:26,012 | INFO     | total number of processed events: 400 (read)
[2026-02-04 04:16:23] 2026-02-04 03:15:26,045 | INFO     | using path: /var/lib/boinc/var/slot28/slots/2/PanDA_Pilot-6999845701/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 04:16:23] 2026-02-04 03:15:26,046 | INFO     | extracted standard info from prmon json
[2026-02-04 04:16:23] 2026-02-04 03:15:26,046 | INFO     | extracted standard memory fields from prmon json
[2026-02-04 04:16:23] 2026-02-04 03:15:26,046 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-04 04:16:23] 2026-02-04 03:15:26,046 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-04 04:16:23] 2026-02-04 03:15:26,047 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-04 04:16:23] 2026-02-04 03:15:26,052 | INFO     | fitting pss+swap vs Time
[2026-02-04 04:16:23] 2026-02-04 03:15:26,052 | INFO     | sum of square deviations: 3772712597.5
[2026-02-04 04:16:23] 2026-02-04 03:15:26,054 | INFO     | sum of deviations: -12399446484.499994
[2026-02-04 04:16:23] 2026-02-04 03:15:26,055 | INFO     | mean x: 1770167926.5
[2026-02-04 04:16:23] 2026-02-04 03:15:26,055 | INFO     | mean y: 2331884.0304347826
[2026-02-04 04:16:23] 2026-02-04 03:15:26,055 | INFO     | intersect: 5820188904.933567
[2026-02-04 04:16:23] 2026-02-04 03:15:26,055 | INFO     | chi2: 1.8979064103962173
[2026-02-04 04:16:23] 2026-02-04 03:15:26,056 | INFO     | sum of square deviations: 3531973200.0
[2026-02-04 04:16:23] 2026-02-04 03:15:26,058 | INFO     | sum of deviations: 1276499297.9999983
[2026-02-04 04:16:23] 2026-02-04 03:15:26,058 | INFO     | mean x: 1770167774.0
[2026-02-04 04:16:23] 2026-02-04 03:15:26,058 | INFO     | mean y: 2340396.7555555557
[2026-02-04 04:16:23] 2026-02-04 03:15:26,059 | INFO     | intersect: -637420380.8327965
[2026-02-04 04:16:23] 2026-02-04 03:15:26,059 | INFO     | chi2: 1.2021035285806074
[2026-02-04 04:16:23] 2026-02-04 03:15:26,059 | INFO     | current chi2=1.2021035285806074 (change=36.66160133103456 %)
[2026-02-04 04:16:23] 2026-02-04 03:15:26,060 | INFO     | sum of square deviations: 3301699115.0
[2026-02-04 04:16:23] 2026-02-04 03:15:26,062 | INFO     | sum of deviations: 1208795550.500005
[2026-02-04 04:16:23] 2026-02-04 03:15:26,062 | INFO     | mean x: 1770167621.5
[2026-02-04 04:16:23] 2026-02-04 03:15:26,062 | INFO     | mean y: 2340352.095454545
[2026-02-04 04:16:23] 2026-02-04 03:15:26,062 | INFO     | intersect: -645741338.5671355
[2026-02-04 04:16:23] 2026-02-04 03:15:26,062 | INFO     | chi2: 1.2021225045826234
[2026-02-04 04:16:23] 2026-02-04 03:15:26,063 | INFO     | current chi2=1.2021225045826234 (change=-0.0015785663684352463 %)
[2026-02-04 04:16:23] 2026-02-04 03:15:26,063 | INFO     | right removable region: 219
[2026-02-04 04:16:23] 2026-02-04 03:15:26,063 | INFO     | sum of square deviations: 3531973200.0
[2026-02-04 04:16:23] 2026-02-04 03:15:26,065 | INFO     | sum of deviations: -35866065750.99999
[2026-02-04 04:16:23] 2026-02-04 03:15:26,065 | INFO     | mean x: 1770168079.0
[2026-02-04 04:16:23] 2026-02-04 03:15:26,066 | INFO     | mean y: 2346539.56
[2026-02-04 04:16:23] 2026-02-04 03:15:26,066 | INFO     | intersect: 17977841005.864372
[2026-02-04 04:16:23] 2026-02-04 03:15:26,066 | INFO     | chi2: 0.7450892144187811
[2026-02-04 04:16:23] 2026-02-04 03:15:26,066 | INFO     | current chi2=0.7450892144187811 (change=60.74151969046607 %)
[2026-02-04 04:16:23] 2026-02-04 03:15:26,067 | INFO     | sum of square deviations: 3301699115.0
[2026-02-04 04:16:23] 2026-02-04 03:15:26,069 | INFO     | sum of deviations: -31121270756.500004
[2026-02-04 04:16:23] 2026-02-04 03:15:26,069 | INFO     | mean x: 1770168231.5
[2026-02-04 04:16:23] 2026-02-04 03:15:26,069 | INFO     | mean y: 2343393.5045454544
[2026-02-04 04:16:23] 2026-02-04 03:15:26,069 | INFO     | intersect: 16687656893.69194
[2026-02-04 04:16:23] 2026-02-04 03:15:26,070 | INFO     | chi2: 0.7383296988371254
[2026-02-04 04:16:23] 2026-02-04 03:15:26,070 | INFO     | current chi2=0.7383296988371254 (change=0.9072088886602032 %)
[2026-02-04 04:16:23] 2026-02-04 03:15:26,070 | INFO     | left removable region: 20
[2026-02-04 04:16:23] 2026-02-04 03:15:26,070 | INFO     | sum of square deviations: 2443580700.0
[2026-02-04 04:16:23] 2026-02-04 03:15:26,072 | INFO     | sum of deviations: -11472413655.000004
[2026-02-04 04:16:23] 2026-02-04 03:15:26,072 | INFO     | mean x: 1770168201.0
[2026-02-04 04:16:23] 2026-02-04 03:15:26,072 | INFO     | mean y: 2348362.5879396987
[2026-02-04 04:16:23] 2026-02-04 03:15:26,073 | INFO     | intersect: 8313144826.481762
[2026-02-04 04:16:23] 2026-02-04 03:15:26,073 | INFO     | chi2: 0.01863396662351304
[2026-02-04 04:16:23] 2026-02-04 03:15:26,073 | INFO     | current memory leak: -4.69 B/s (using 199 data points, chi2=0.02)
[2026-02-04 04:16:23] 2026-02-04 03:15:26,074 | INFO     | could have reported an average CPU frequency of 2756 MHz (11 samples)
[2026-02-04 04:16:23] 2026-02-04 03:15:26,074 | INFO     | ..............................
[2026-02-04 04:16:23] 2026-02-04 03:15:26,074 | INFO     | . Timing measurements:
[2026-02-04 04:16:23] 2026-02-04 03:15:26,074 | INFO     | . get job = 0 s
[2026-02-04 04:16:23] 2026-02-04 03:15:26,074 | INFO     | . initial setup = 7 s
[2026-02-04 04:16:23] 2026-02-04 03:15:26,074 | INFO     | . payload setup = 8 s
[2026-02-04 04:16:23] 2026-02-04 03:15:26,074 | INFO     | . stage-in = 0 s
[2026-02-04 04:16:23] 2026-02-04 03:15:26,075 | INFO     | . payload execution = 13979 s
[2026-02-04 04:16:23] 2026-02-04 03:15:26,075 | INFO     | . stage-out = 1 s
[2026-02-04 04:16:23] 2026-02-04 03:15:26,075 | INFO     | . log creation = 0 s
[2026-02-04 04:16:23] 2026-02-04 03:15:26,075 | INFO     | ..............................
[2026-02-04 04:16:23] 2026-02-04 03:15:26,200 | INFO     | 
[2026-02-04 04:16:23] 2026-02-04 03:15:26,200 | INFO     | job summary report
[2026-02-04 04:16:23] 2026-02-04 03:15:26,200 | INFO     | --------------------------------------------------
[2026-02-04 04:16:23] 2026-02-04 03:15:26,200 | INFO     | PanDA job id: 6999845701
[2026-02-04 04:16:23] 2026-02-04 03:15:26,200 | INFO     | task id: 48317892
[2026-02-04 04:16:23] 2026-02-04 03:15:26,201 | INFO     | errors: (none)
[2026-02-04 04:16:23] 2026-02-04 03:15:26,201 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 04:16:23] 2026-02-04 03:15:26,201 | INFO     | pilot state: finished 
[2026-02-04 04:16:23] 2026-02-04 03:15:26,201 | INFO     | transexitcode: 0
[2026-02-04 04:16:23] 2026-02-04 03:15:26,201 | INFO     | exeerrorcode: 0
[2026-02-04 04:16:23] 2026-02-04 03:15:26,201 | INFO     | exeerrordiag: 
[2026-02-04 04:16:23] 2026-02-04 03:15:26,201 | INFO     | exitcode: 0
[2026-02-04 04:16:23] 2026-02-04 03:15:26,201 | INFO     | exitmsg: OK
[2026-02-04 04:16:23] 2026-02-04 03:15:26,202 | INFO     | cpuconsumptiontime: 54094 s
[2026-02-04 04:16:23] 2026-02-04 03:15:26,202 | INFO     | nevents: 400
[2026-02-04 04:16:23] 2026-02-04 03:15:26,202 | INFO     | neventsw: 0
[2026-02-04 04:16:23] 2026-02-04 03:15:26,202 | INFO     | pid: 1502533
[2026-02-04 04:16:23] 2026-02-04 03:15:26,202 | INFO     | pgrp: 1502533
[2026-02-04 04:16:23] 2026-02-04 03:15:26,202 | INFO     | corecount: 4
[2026-02-04 04:16:23] 2026-02-04 03:15:26,202 | INFO     | event service: False
[2026-02-04 04:16:23] 2026-02-04 03:15:26,202 | INFO     | sizes: {0: 2277972, 1: 2278234, 11: 2278262, 13992: 2309122, 13993: 2318142, 13997: 2318198, 13999: 2318520}
[2026-02-04 04:16:23] 2026-02-04 03:15:26,203 | INFO     | --------------------------------------------------
[2026-02-04 04:16:23] 2026-02-04 03:15:26,203 | INFO     | 
[2026-02-04 04:16:23] 2026-02-04 03:15:26,203 | INFO     | executing command: ls -lF /var/lib/boinc/var/slot28/slots/2
[2026-02-04 04:16:23] 2026-02-04 03:15:26,240 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 04:16:23] 2026-02-04 03:15:26,241 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 04:16:23] 2026-02-04 03:15:26,241 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 04:16:23] 2026-02-04 03:15:26,241 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 04:16:23] 2026-02-04 03:15:26,241 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 04:16:23] 2026-02-04 03:15:26,241 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 04:16:23] 2026-02-04 03:15:26,241 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 04:16:23] 2026-02-04 03:15:26,242 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 04:16:23] 2026-02-04 03:15:26,242 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 04:16:23] 2026-02-04 03:15:26,242 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 04:16:23] 2026-02-04 03:15:26,242 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 04:16:23] 2026-02-04 03:15:26,242 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 04:16:23] 2026-02-04 03:15:26,242 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 04:16:23] 2026-02-04 03:15:26,242 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 04:16:23] 2026-02-04 03:15:26,243 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 04:16:23] 2026-02-04 03:15:26,243 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 04:16:23] 2026-02-04 03:15:26,243 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 04:16:23] 2026-02-04 03:15:26,243 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 04:16:23] 2026-02-04 03:15:26,243 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 04:16:23] 2026-02-04 03:15:26,243 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 04:16:23] 2026-02-04 03:15:26,243 | INFO     | job 6999845701 has completed (purged errors)
[2026-02-04 04:16:23] 2026-02-04 03:15:26,244 | INFO     | overall cleanup function is called
[2026-02-04 04:16:23] 2026-02-04 03:15:27,253 | INFO     | --- collectZombieJob: --- 10, [1502533]
[2026-02-04 04:16:23] 2026-02-04 03:15:27,254 | INFO     | zombie collector waiting for pid 1502533
[2026-02-04 04:16:23] 2026-02-04 03:15:27,254 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 04:16:23] 2026-02-04 03:15:27,254 | INFO     | collected zombie processes
[2026-02-04 04:16:23] 2026-02-04 03:15:27,254 | INFO     | will attempt to kill all subprocesses of pid=1502533
[2026-02-04 04:16:23] 2026-02-04 03:15:28,257 | INFO     | process IDs to be killed: [1502533] (in reverse order)
[2026-02-04 04:16:23] 2026-02-04 03:15:28,655 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 04:16:23] 2026-02-04 03:15:28,656 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 04:16:23] 2026-02-04 03:15:28,694 | INFO     | did not find any defunct processes belonging to 1502533
[2026-02-04 04:16:23] 2026-02-04 03:15:28,730 | INFO     | did not find any defunct processes belonging to 1502533
[2026-02-04 04:16:23] 2026-02-04 03:15:28,731 | INFO     | ready for new job
[2026-02-04 04:16:23] 2026-02-04 03:15:28,731 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 04:16:23] 2026-02-04 03:15:28,734 | INFO     | **************************************
[2026-02-04 04:16:23] 2026-02-04 03:15:28,734 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 04:16:23] 2026-02-04 03:15:28,734 | INFO     | **************************************
[2026-02-04 04:16:23] 2026-02-04 03:15:28,735 | INFO     | 
[2026-02-04 04:16:23] 2026-02-04 03:15:28,746 | INFO     | architecture information:
[2026-02-04 04:16:23] 2026-02-04 03:15:28,746 | INFO     | executing command: cat /etc/os-release
[2026-02-04 04:16:23] 2026-02-04 03:15:28,773 | INFO     | cat /etc/os-release:
[2026-02-04 04:16:23] NAME="CentOS Linux"
[2026-02-04 04:16:23] VERSION="7 (Core)"
[2026-02-04 04:16:23] ID="centos"
[2026-02-04 04:16:23] ID_LIKE="rhel fedora"
[2026-02-04 04:16:23] VERSION_ID="7"
[2026-02-04 04:16:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 04:16:23] ANSI_COLOR="0;31"
[2026-02-04 04:16:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 04:16:23] HOME_URL="https://www.centos.org/"
[2026-02-04 04:16:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 04:16:23] 
[2026-02-04 04:16:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 04:16:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 04:16:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 04:16:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 04:16:23] 
[2026-02-04 04:16:23] 2026-02-04 03:15:28,774 | INFO     | **************************************
[2026-02-04 04:16:23] 2026-02-04 03:15:29,277 | INFO     | executing command: df -mP /var/lib/boinc/var/slot28/slots/2
[2026-02-04 04:16:23] 2026-02-04 03:15:29,306 | INFO     | sufficient remaining disk space (131693805568 B)
[2026-02-04 04:16:23] 2026-02-04 03:15:29,307 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 04:16:23] 2026-02-04 03:15:29,307 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 04:16:23] 2026-02-04 03:15:29,307 | INFO     | update_server=False
[2026-02-04 04:16:23] 2026-02-04 03:15:29,307 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 04:16:23] 2026-02-04 03:15:29,308 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 04:16:23] 2026-02-04 03:15:29,317 | INFO     | all data control threads have been joined
[2026-02-04 04:16:23] 2026-02-04 03:15:29,620 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 04:16:23] 2026-02-04 03:15:29,772 | INFO     | all payload control threads have been joined
[2026-02-04 04:16:23] 2026-02-04 03:15:30,149 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 04:16:23] 2026-02-04 03:15:30,150 | INFO     | aborting loop
[2026-02-04 04:16:23] 2026-02-04 03:15:30,308 | INFO     | [job] retrieve thread has finished
[2026-02-04 04:16:23] 2026-02-04 03:15:30,319 | INFO     | all job control threads have been joined
[2026-02-04 04:16:23] 2026-02-04 03:15:30,322 | INFO     | [data] control thread has finished
[2026-02-04 04:16:23] 2026-02-04 03:15:30,765 | INFO     | [job] validate thread has finished
[2026-02-04 04:16:23] 2026-02-04 03:15:30,778 | INFO     | [payload] control thread has finished
[2026-02-04 04:16:23] 2026-02-04 03:15:30,923 | INFO     | [payload] validate_post thread has finished
[2026-02-04 04:16:23] 2026-02-04 03:15:31,145 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 04:16:23] 2026-02-04 03:15:31,154 | INFO     | [job] job monitor thread has finished
[2026-02-04 04:16:23] 2026-02-04 03:15:31,163 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 04:16:23] 2026-02-04 03:15:31,210 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 04:16:23] 2026-02-04 03:15:31,315 | INFO     | [data] copytool_out thread has finished
[2026-02-04 04:16:23] 2026-02-04 03:15:31,324 | INFO     | [job] control thread has finished
[2026-02-04 04:16:23] 2026-02-04 03:15:31,521 | INFO     | [payload] failed_post thread has finished
[2026-02-04 04:16:23] 2026-02-04 03:15:31,646 | INFO     | [data] copytool_in thread has finished
[2026-02-04 04:16:23] 2026-02-04 03:15:31,648 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 04:16:23] 2026-02-04 03:15:32,216 | INFO     | [job] queue monitor thread has finished
[2026-02-04 04:16:23] 2026-02-04 03:15:33,626 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 04:16:23] 2026-02-04 03:15:39,982 | INFO     | job.realtimelogging is not enabled
[2026-02-04 04:16:23] 2026-02-04 03:15:40,987 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 04:16:23] 2026-02-04 03:15:59,032 | INFO     | PID=1497305 has CPU usage=14.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-04 04:16:23] 2026-02-04 03:15:59,032 | INFO     | .. there are 21 such processes running
[2026-02-04 04:16:23] 2026-02-04 03:15:59,033 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 04:16:23] 2026-02-04 03:15:59,033 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 04:16:23] 2026-02-04 03:15:59,033 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 04:16:23] 2026-02-04 03:16:17,474 | INFO     | [monitor] cgroup control has ended
[2026-02-04 04:16:23] 2026-02-04 03:16:18,066 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22867271141184)>', '<ExcThread(monitor, started 22867034257152)>']
[2026-02-04 04:16:23] 2026-02-04 03:16:18,124 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 04:16:23] 2026-02-04 03:16:18,127 | INFO     | [monitor] control thread has ended
[2026-02-04 04:16:23] 2026-02-04 03:16:23,090 | INFO     | all workflow threads have been joined
[2026-02-04 04:16:23] 2026-02-04 03:16:23,090 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 04:16:23] 2026-02-04 03:16:23,091 | INFO     | traces error code: 0
[2026-02-04 04:16:23] 2026-02-04 03:16:23,091 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 04:16:23] 2026-02-04 03:16:23,260 [wrapper] ==== pilot stdout END ====
[2026-02-04 04:16:23] 2026-02-04 03:16:23,269 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 04:16:23] 2026-02-04 03:16:23,274 [wrapper] pilotpid: 1497305
[2026-02-04 04:16:23] 2026-02-04 03:16:23,280 [wrapper] Pilot exit status: 0
[2026-02-04 04:16:23] 2026-02-04 03:16:23,301 [wrapper] pandaids: 6999845701
[2026-02-04 04:16:23] 2026-02-04 03:16:23,555 [wrapper] cleanup supervisor_pilot 2003163 1497306
[2026-02-04 04:16:23] 2026-02-04 03:16:23,561 [wrapper] Test setup, not cleaning
[2026-02-04 04:16:23] 2026-02-04 03:16:23,566 [wrapper] apfmon messages muted
[2026-02-04 04:16:23] 2026-02-04 03:16:23,571 [wrapper] ==== wrapper stdout END ====
[2026-02-04 04:16:23] 2026-02-04 03:16:23,576 [wrapper] ==== wrapper stderr END ====
[2026-02-04 04:16:23]  *** Error codes and diagnostics ***
[2026-02-04 04:16:23]     "exeErrorCode": 0,
[2026-02-04 04:16:23]     "exeErrorDiag": "",
[2026-02-04 04:16:23]     "pilotErrorCode": 0,
[2026-02-04 04:16:23]     "pilotErrorDiag": "",
[2026-02-04 04:16:23]  *** Listing of results directory ***
[2026-02-04 04:16:23] total 681492
[2026-02-04 04:16:23] -rw-r--r--. 1 boinc boinc    584422 Feb  3 18:15 pilot3.tar.gz
[2026-02-04 04:16:23] -rwx------. 1 boinc boinc     36322 Feb  3 18:15 runpilot2-wrapper.sh
[2026-02-04 04:16:23] -rw-r--r--. 1 boinc boinc      5111 Feb  3 18:16 queuedata.json
[2026-02-04 04:16:23] -rw-r--r--. 1 boinc boinc       100 Feb  3 22:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 04:16:23] -rwxr-xr-x. 1 boinc boinc      7986 Feb  3 22:50 run_atlas
[2026-02-04 04:16:23] -rw-r--r--. 1 boinc boinc       105 Feb  3 22:50 job.xml
[2026-02-04 04:16:23] -rw-r--r--. 1 boinc boinc      6685 Feb  4 00:21 init_data.xml
[2026-02-04 04:16:23] -rw-r--r--. 2 boinc boinc 501420453 Feb  4 00:21 EVNT.48317889._000224.pool.root.1
[2026-02-04 04:16:23] drwxrwx--x. 2 boinc boinc      4096 Feb  4 00:21 shared
[2026-02-04 04:16:23] -rw-r--r--. 2 boinc boinc    597757 Feb  4 00:21 input.tar.gz
[2026-02-04 04:16:23] -rw-r--r--. 2 boinc boinc     15845 Feb  4 00:21 start_atlas.sh
[2026-02-04 04:16:23] -rw-r--r--. 1 boinc boinc         0 Feb  4 00:21 boinc_lockfile
[2026-02-04 04:16:23] -rw-r--r--. 1 boinc boinc      2522 Feb  4 00:21 pandaJob.out
[2026-02-04 04:16:23] -rw-------. 1 boinc boinc   1009236 Feb  4 00:21 agis_schedconf.cvmfs.json
[2026-02-04 04:16:23] -rw-------. 1 boinc boinc       443 Feb  4 00:21 workernode_map.json
[2026-02-04 04:16:23] drwx------. 5 boinc boinc      4096 Feb  4 00:21 pilot3
[2026-02-04 04:16:23] -rw-------. 1 boinc boinc 187930308 Feb  4 04:14 HITS.48317892._011789.pool.root.1
[2026-02-04 04:16:23] -rw-r--r--. 1 boinc boinc       531 Feb  4 04:14 boinc_task_state.xml
[2026-02-04 04:16:23] -rw-------. 1 boinc boinc        95 Feb  4 04:15 pilot_heartbeat.json
[2026-02-04 04:16:23] -rw-------. 1 boinc boinc      1031 Feb  4 04:15 memory_monitor_summary.json
[2026-02-04 04:16:23] -rw-------. 1 boinc boinc   1511668 Feb  4 04:15 agis_ddmendpoints.agis.ALL.json
[2026-02-04 04:16:23] -rw-------. 1 boinc boinc    407790 Feb  4 04:15 log.48317892._011789.job.log.tgz.1
[2026-02-04 04:16:23] -rw-------. 1 boinc boinc      6361 Feb  4 04:15 heartbeat.json
[2026-02-04 04:16:23] -rw-r--r--. 1 boinc boinc      8192 Feb  4 04:16 boinc_mmap_file
[2026-02-04 04:16:23] -rw-r--r--. 1 boinc boinc        28 Feb  4 04:16 wrapper_checkpoint.txt
[2026-02-04 04:16:23] -rw-------. 1 boinc boinc      4903 Feb  4 04:16 pilotlog.txt
[2026-02-04 04:16:23] -rw-------. 1 boinc boinc   1870525 Feb  4 04:16 log.48317892._011789.job.log.1
[2026-02-04 04:16:23] -rw-------. 1 boinc boinc       357 Feb  4 04:16 output.list
[2026-02-04 04:16:23] -rw-r--r--. 1 boinc boinc       620 Feb  4 04:16 runtime_log
[2026-02-04 04:16:23] -rw-------. 1 boinc boinc   2293760 Feb  4 04:16 result.tar.gz
[2026-02-04 04:16:23] -rw-r--r--. 1 boinc boinc      9205 Feb  4 04:16 runtime_log.err
[2026-02-04 04:16:23] -rw-------. 1 boinc boinc       665 Feb  4 04:16 m8WKDmMBZ78nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmsUVKDmnQrP2n.diag
[2026-02-04 04:16:23] -rw-r--r--. 1 boinc boinc     20904 Feb  4 04:16 stderr.txt
[2026-02-04 04:16:23] HITS file was successfully produced:
[2026-02-04 04:16:23] -rw-------. 1 boinc boinc 187930308 Feb  4 04:14 shared/HITS.pool.root.1
[2026-02-04 04:16:23]  *** Contents of shared directory: ***
[2026-02-04 04:16:23] total 676048
[2026-02-04 04:16:23] -rw-r--r--. 2 boinc boinc 501420453 Feb  4 00:21 ATLAS.root_0
[2026-02-04 04:16:23] -rw-r--r--. 2 boinc boinc    597757 Feb  4 00:21 input.tar.gz
[2026-02-04 04:16:23] -rw-r--r--. 2 boinc boinc     15845 Feb  4 00:21 start_atlas.sh
[2026-02-04 04:16:23] -rw-------. 1 boinc boinc 187930308 Feb  4 04:14 HITS.pool.root.1
[2026-02-04 04:16:23] -rw-------. 1 boinc boinc   2293760 Feb  4 04:16 result.tar.gz
04:16:25 (1493025): run_atlas exited; CPU time 55482.904032
04:16:25 (1493025): called boinc_finish(0)

</stderr_txt>
]]>

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