Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:45:53 (1938233): wrapper (7.7.26015): starting
00:45:53 (1938233): wrapper: running run_atlas (--nthreads 4)
[2026-02-04 00:45:53] Arguments: --nthreads 4
[2026-02-04 00:45:53] Threads: 4
[2026-02-04 00:45:53] Checking for CVMFS
[2026-02-04 00:45:53] No cvmfs_config command found, will try listing directly
[2026-02-04 00:45:53] CVMFS is ok
[2026-02-04 00:45:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-04 00:45:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-04 00:45:53] Further information can be found at the LHC@home message board.
[2026-02-04 00:45:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 00:45:53] Checking for apptainer binary...
[2026-02-04 00:45:53] which: no apptainer in ((null))
[2026-02-04 00:45:53] apptainer is not installed, using version from CVMFS
[2026-02-04 00:45:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 00:45:53] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot16/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut32.grid.cesnet.cz
[2026-02-04 00:45:53] apptainer works
[2026-02-04 00:45:53] Set ATHENA_PROC_NUMBER=4
[2026-02-04 00:45:53] Set ATHENA_CORE_NUMBER=4
[2026-02-04 00:45:53] Starting ATLAS job with PandaID=6994197497
[2026-02-04 00:45:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot16/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 05:24:45]  *** The last 200 lines of the pilot log: ***
[2026-02-04 05:24:45] 2026-02-04 04:23:56,865 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-04 05:24:45] 2026-02-04 04:23:56,980 | INFO     | job 6994197497 has state=finished
[2026-02-04 05:24:45] 2026-02-04 04:23:56,980 | INFO     | preparing for final server update for job 6994197497 in state='finished'
[2026-02-04 05:24:45] 2026-02-04 04:23:56,981 | INFO     | reading metadata from: /scratch/boinc/var/slot16/slots/0/PanDA_Pilot-6994197497/jobReport.json
[2026-02-04 05:24:45] 2026-02-04 04:23:56,984 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot16/slots/0/workernode_map.json
[2026-02-04 05:24:45] 2026-02-04 04:23:56,984 | INFO     | this job has now completed (state=finished)
[2026-02-04 05:24:45] 2026-02-04 04:23:56,984 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-04 05:24:45] 2026-02-04 04:23:56,984 | INFO     | log transfer has been attempted: DONE
[2026-02-04 05:24:45] 2026-02-04 04:23:56,985 | INFO     | job 6994197497 has finished - writing final server update
[2026-02-04 05:24:45] 2026-02-04 04:23:56,985 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1849703/.job.ad'
[2026-02-04 05:24:45] 2026-02-04 04:23:56,985 | INFO     | total number of processed events: 400 (read)
[2026-02-04 05:24:45] 2026-02-04 04:23:56,994 | INFO     | using path: /scratch/boinc/var/slot16/slots/0/PanDA_Pilot-6994197497/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 05:24:45] 2026-02-04 04:23:56,994 | INFO     | extracted standard info from prmon json
[2026-02-04 05:24:45] 2026-02-04 04:23:56,994 | INFO     | extracted standard memory fields from prmon json
[2026-02-04 05:24:45] 2026-02-04 04:23:56,995 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-04 05:24:45] 2026-02-04 04:23:56,995 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-04 05:24:45] 2026-02-04 04:23:56,995 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-04 05:24:45] 2026-02-04 04:23:57,001 | INFO     | fitting pss+swap vs Time
[2026-02-04 05:24:45] 2026-02-04 04:23:57,002 | INFO     | sum of square deviations: 6309000152.0
[2026-02-04 05:24:45] 2026-02-04 04:23:57,004 | INFO     | sum of deviations: -22643550627.999992
[2026-02-04 05:24:45] 2026-02-04 04:23:57,004 | INFO     | mean x: 1770170689.0
[2026-02-04 05:24:45] 2026-02-04 04:23:57,004 | INFO     | mean y: 2355029.058608059
[2026-02-04 05:24:45] 2026-02-04 04:23:57,004 | INFO     | intersect: 6355651692.693421
[2026-02-04 05:24:45] 2026-02-04 04:23:57,005 | INFO     | chi2: 1.5893304322416437
[2026-02-04 05:24:45] 2026-02-04 04:23:57,006 | INFO     | sum of square deviations: 5968658887.0
[2026-02-04 05:24:45] 2026-02-04 04:23:57,008 | INFO     | sum of deviations: -22226104966.500008
[2026-02-04 05:24:45] 2026-02-04 04:23:57,008 | INFO     | mean x: 1770170536.5
[2026-02-04 05:24:45] 2026-02-04 04:23:57,008 | INFO     | mean y: 2355216.175373134
[2026-02-04 05:24:45] 2026-02-04 04:23:57,008 | INFO     | intersect: 6594120116.419141
[2026-02-04 05:24:45] 2026-02-04 04:23:57,009 | INFO     | chi2: 1.5880434543892554
[2026-02-04 05:24:45] 2026-02-04 04:23:57,009 | INFO     | current chi2=1.5880434543892554 (change=0.08097610328728795 %)
[2026-02-04 05:24:45] 2026-02-04 04:23:57,009 | INFO     | right removable region: 267
[2026-02-04 05:24:45] 2026-02-04 04:23:57,010 | INFO     | sum of square deviations: 5968658887.0
[2026-02-04 05:24:45] 2026-02-04 04:23:57,012 | INFO     | sum of deviations: -51710095432.5
[2026-02-04 05:24:45] 2026-02-04 04:23:57,012 | INFO     | mean x: 1770170841.5
[2026-02-04 05:24:45] 2026-02-04 04:23:57,012 | INFO     | mean y: 2367888.526119403
[2026-02-04 05:24:45] 2026-02-04 04:23:57,012 | INFO     | intersect: 15338426604.356337
[2026-02-04 05:24:45] 2026-02-04 04:23:57,013 | INFO     | chi2: 0.33400979467859304
[2026-02-04 05:24:45] 2026-02-04 04:23:57,013 | INFO     | current chi2=0.33400979467859304 (change=78.98424469180428 %)
[2026-02-04 05:24:45] 2026-02-04 04:23:57,013 | INFO     | sum of square deviations: 5640782972.0
[2026-02-04 05:24:45] 2026-02-04 04:23:57,015 | INFO     | sum of deviations: -40599983683.0
[2026-02-04 05:24:45] 2026-02-04 04:23:57,016 | INFO     | mean x: 1770170994.0
[2026-02-04 05:24:45] 2026-02-04 04:23:57,016 | INFO     | mean y: 2362708.4562737644
[2026-02-04 05:24:45] 2026-02-04 04:23:57,016 | INFO     | intersect: 12743309103.534119
[2026-02-04 05:24:45] 2026-02-04 04:23:57,016 | INFO     | chi2: 0.2951795227723721
[2026-02-04 05:24:45] 2026-02-04 04:23:57,017 | INFO     | current chi2=0.2951795227723721 (change=11.62548899010165 %)
[2026-02-04 05:24:45] 2026-02-04 04:23:57,017 | INFO     | left removable region: 20
[2026-02-04 05:24:45] 2026-02-04 04:23:57,017 | INFO     | sum of square deviations: 4672638308.0
[2026-02-04 05:24:45] 2026-02-04 04:23:57,019 | INFO     | sum of deviations: -12086054623.000002
[2026-02-04 05:24:45] 2026-02-04 04:23:57,020 | INFO     | mean x: 1770171116.0
[2026-02-04 05:24:45] 2026-02-04 04:23:57,020 | INFO     | mean y: 2348834.951417004
[2026-02-04 05:24:45] 2026-02-04 04:23:57,020 | INFO     | intersect: 4581000849.040258
[2026-02-04 05:24:45] 2026-02-04 04:23:57,020 | INFO     | chi2: 0.12071513342452507
[2026-02-04 05:24:45] 2026-02-04 04:23:57,021 | INFO     | current memory leak: -2.59 B/s (using 247 data points, chi2=0.12)
[2026-02-04 05:24:45] 2026-02-04 04:23:57,021 | INFO     | could have reported an average CPU frequency of 2536 MHz (13 samples)
[2026-02-04 05:24:45] 2026-02-04 04:23:57,021 | INFO     | ..............................
[2026-02-04 05:24:45] 2026-02-04 04:23:57,021 | INFO     | . Timing measurements:
[2026-02-04 05:24:45] 2026-02-04 04:23:57,022 | INFO     | . get job = 0 s
[2026-02-04 05:24:45] 2026-02-04 04:23:57,022 | INFO     | . initial setup = 5 s
[2026-02-04 05:24:45] 2026-02-04 04:23:57,022 | INFO     | . payload setup = 5 s
[2026-02-04 05:24:45] 2026-02-04 04:23:57,022 | INFO     | . stage-in = 0 s
[2026-02-04 05:24:45] 2026-02-04 04:23:57,022 | INFO     | . payload execution = 16642 s
[2026-02-04 05:24:45] 2026-02-04 04:23:57,022 | INFO     | . stage-out = 1 s
[2026-02-04 05:24:45] 2026-02-04 04:23:57,022 | INFO     | . log creation = 0 s
[2026-02-04 05:24:45] 2026-02-04 04:23:57,022 | INFO     | ..............................
[2026-02-04 05:24:45] 2026-02-04 04:23:57,137 | INFO     | 
[2026-02-04 05:24:45] 2026-02-04 04:23:57,138 | INFO     | job summary report
[2026-02-04 05:24:45] 2026-02-04 04:23:57,138 | INFO     | --------------------------------------------------
[2026-02-04 05:24:45] 2026-02-04 04:23:57,138 | INFO     | PanDA job id: 6994197497
[2026-02-04 05:24:45] 2026-02-04 04:23:57,138 | INFO     | task id: 48318042
[2026-02-04 05:24:45] 2026-02-04 04:23:57,138 | INFO     | errors: (none)
[2026-02-04 05:24:45] 2026-02-04 04:23:57,138 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 05:24:45] 2026-02-04 04:23:57,139 | INFO     | pilot state: finished 
[2026-02-04 05:24:45] 2026-02-04 04:23:57,139 | INFO     | transexitcode: 0
[2026-02-04 05:24:45] 2026-02-04 04:23:57,139 | INFO     | exeerrorcode: 0
[2026-02-04 05:24:45] 2026-02-04 04:23:57,139 | INFO     | exeerrordiag: 
[2026-02-04 05:24:45] 2026-02-04 04:23:57,139 | INFO     | exitcode: 0
[2026-02-04 05:24:45] 2026-02-04 04:23:57,139 | INFO     | exitmsg: OK
[2026-02-04 05:24:45] 2026-02-04 04:23:57,139 | INFO     | cpuconsumptiontime: 61826 s
[2026-02-04 05:24:45] 2026-02-04 04:23:57,140 | INFO     | nevents: 400
[2026-02-04 05:24:45] 2026-02-04 04:23:57,140 | INFO     | neventsw: 0
[2026-02-04 05:24:45] 2026-02-04 04:23:57,140 | INFO     | pid: 1947501
[2026-02-04 05:24:45] 2026-02-04 04:23:57,140 | INFO     | pgrp: 1947501
[2026-02-04 05:24:45] 2026-02-04 04:23:57,140 | INFO     | corecount: 4
[2026-02-04 05:24:45] 2026-02-04 04:23:57,140 | INFO     | event service: False
[2026-02-04 05:24:45] 2026-02-04 04:23:57,140 | INFO     | sizes: {0: 2278035, 1: 2278325, 11: 2278325, 16651: 2310053, 16652: 2310052, 16653: 2319128, 16655: 2319506}
[2026-02-04 05:24:45] 2026-02-04 04:23:57,141 | INFO     | --------------------------------------------------
[2026-02-04 05:24:45] 2026-02-04 04:23:57,141 | INFO     | 
[2026-02-04 05:24:45] 2026-02-04 04:23:57,141 | INFO     | executing command: ls -lF /scratch/boinc/var/slot16/slots/0
[2026-02-04 05:24:45] 2026-02-04 04:23:57,161 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 05:24:45] 2026-02-04 04:23:57,161 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 05:24:45] 2026-02-04 04:23:57,161 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 05:24:45] 2026-02-04 04:23:57,161 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 05:24:45] 2026-02-04 04:23:57,161 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 05:24:45] 2026-02-04 04:23:57,162 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 05:24:45] 2026-02-04 04:23:57,162 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 05:24:45] 2026-02-04 04:23:57,162 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 05:24:45] 2026-02-04 04:23:57,162 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 05:24:45] 2026-02-04 04:23:57,162 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 05:24:45] 2026-02-04 04:23:57,162 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 05:24:45] 2026-02-04 04:23:57,162 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 05:24:45] 2026-02-04 04:23:57,163 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 05:24:45] 2026-02-04 04:23:57,163 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 05:24:45] 2026-02-04 04:23:57,163 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 05:24:45] 2026-02-04 04:23:57,163 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 05:24:45] 2026-02-04 04:23:57,163 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 05:24:45] 2026-02-04 04:23:57,163 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 05:24:45] 2026-02-04 04:23:57,163 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 05:24:45] 2026-02-04 04:23:57,164 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 05:24:45] 2026-02-04 04:23:57,164 | INFO     | job 6994197497 has completed (purged errors)
[2026-02-04 05:24:45] 2026-02-04 04:23:57,164 | INFO     | overall cleanup function is called
[2026-02-04 05:24:45] 2026-02-04 04:23:58,172 | INFO     | --- collectZombieJob: --- 10, [1947501]
[2026-02-04 05:24:45] 2026-02-04 04:23:58,172 | INFO     | zombie collector waiting for pid 1947501
[2026-02-04 05:24:45] 2026-02-04 04:23:58,172 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 05:24:45] 2026-02-04 04:23:58,173 | INFO     | collected zombie processes
[2026-02-04 05:24:45] 2026-02-04 04:23:58,173 | INFO     | will attempt to kill all subprocesses of pid=1947501
[2026-02-04 05:24:45] 2026-02-04 04:23:58,464 | INFO     | process IDs to be killed: [1947501] (in reverse order)
[2026-02-04 05:24:45] 2026-02-04 04:23:58,550 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 05:24:45] 2026-02-04 04:23:58,551 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 05:24:45] 2026-02-04 04:23:58,559 | INFO     | did not find any defunct processes belonging to 1947501
[2026-02-04 05:24:45] 2026-02-04 04:23:58,566 | INFO     | did not find any defunct processes belonging to 1947501
[2026-02-04 05:24:45] 2026-02-04 04:23:58,567 | INFO     | ready for new job
[2026-02-04 05:24:45] 2026-02-04 04:23:58,567 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 05:24:45] 2026-02-04 04:23:58,569 | INFO     | **************************************
[2026-02-04 05:24:45] 2026-02-04 04:23:58,569 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 05:24:45] 2026-02-04 04:23:58,570 | INFO     | **************************************
[2026-02-04 05:24:45] 2026-02-04 04:23:58,570 | INFO     | 
[2026-02-04 05:24:45] 2026-02-04 04:23:58,572 | INFO     | architecture information:
[2026-02-04 05:24:45] 2026-02-04 04:23:58,572 | INFO     | executing command: cat /etc/os-release
[2026-02-04 05:24:45] 2026-02-04 04:23:58,585 | INFO     | cat /etc/os-release:
[2026-02-04 05:24:45] NAME="CentOS Linux"
[2026-02-04 05:24:45] VERSION="7 (Core)"
[2026-02-04 05:24:45] ID="centos"
[2026-02-04 05:24:45] ID_LIKE="rhel fedora"
[2026-02-04 05:24:45] VERSION_ID="7"
[2026-02-04 05:24:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 05:24:45] ANSI_COLOR="0;31"
[2026-02-04 05:24:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 05:24:45] HOME_URL="https://www.centos.org/"
[2026-02-04 05:24:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 05:24:45] 
[2026-02-04 05:24:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 05:24:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 05:24:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 05:24:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 05:24:45] 
[2026-02-04 05:24:45] 2026-02-04 04:23:58,586 | INFO     | **************************************
[2026-02-04 05:24:45] 2026-02-04 04:23:59,089 | INFO     | executing command: df -mP /scratch/boinc/var/slot16/slots/0
[2026-02-04 05:24:45] 2026-02-04 04:23:59,103 | INFO     | sufficient remaining disk space (1652129005568 B)
[2026-02-04 05:24:45] 2026-02-04 04:23:59,103 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 05:24:45] 2026-02-04 04:23:59,103 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 05:24:45] 2026-02-04 04:23:59,103 | INFO     | update_server=False
[2026-02-04 05:24:45] 2026-02-04 04:23:59,103 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 05:24:45] 2026-02-04 04:23:59,104 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 05:24:45] 2026-02-04 04:23:59,104 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 05:24:45] 2026-02-04 04:23:59,104 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 05:24:45] 2026-02-04 04:23:59,104 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 05:24:45] 2026-02-04 04:23:59,104 | INFO     | aborting loop
[2026-02-04 05:24:45] 2026-02-04 04:23:59,358 | INFO     | all payload control threads have been joined
[2026-02-04 05:24:45] 2026-02-04 04:23:59,496 | INFO     | all job control threads have been joined
[2026-02-04 05:24:45] 2026-02-04 04:24:00,105 | INFO     | [job] retrieve thread has finished
[2026-02-04 05:24:45] 2026-02-04 04:24:00,106 | INFO     | [job] queue monitor thread has finished
[2026-02-04 05:24:45] 2026-02-04 04:24:00,111 | INFO     | [job] job monitor thread has finished
[2026-02-04 05:24:45] 2026-02-04 04:24:00,199 | INFO     | all data control threads have been joined
[2026-02-04 05:24:45] 2026-02-04 04:24:00,336 | INFO     | [data] copytool_in thread has finished
[2026-02-04 05:24:45] 2026-02-04 04:24:00,360 | INFO     | [payload] control thread has finished
[2026-02-04 05:24:45] 2026-02-04 04:24:00,386 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 05:24:45] 2026-02-04 04:24:00,501 | INFO     | [job] control thread has finished
[2026-02-04 05:24:45] 2026-02-04 04:24:00,578 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 05:24:45] 2026-02-04 04:24:00,820 | INFO     | [job] validate thread has finished
[2026-02-04 05:24:45] 2026-02-04 04:24:00,874 | INFO     | [payload] failed_post thread has finished
[2026-02-04 05:24:45] 2026-02-04 04:24:01,066 | INFO     | [payload] validate_post thread has finished
[2026-02-04 05:24:45] 2026-02-04 04:24:01,111 | INFO     | [data] copytool_out thread has finished
[2026-02-04 05:24:45] 2026-02-04 04:24:01,204 | INFO     | [data] control thread has finished
[2026-02-04 05:24:45] 2026-02-04 04:24:01,293 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 05:24:45] 2026-02-04 04:24:01,317 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 05:24:45] 2026-02-04 04:24:03,111 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 05:24:45] 2026-02-04 04:24:30,131 | INFO     | PID=1942889 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-04 05:24:45] 2026-02-04 04:24:30,131 | INFO     | .. there are 7 such processes running
[2026-02-04 05:24:45] 2026-02-04 04:24:30,131 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 05:24:45] 2026-02-04 04:24:30,131 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 05:24:45] 2026-02-04 04:24:30,131 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 05:24:45] 2026-02-04 04:24:38,229 | INFO     | [monitor] cgroup control has ended
[2026-02-04 05:24:45] 2026-02-04 04:24:39,841 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22619707729728)>', '<ExcThread(monitor, started 22619465455360)>']
[2026-02-04 05:24:45] 2026-02-04 04:24:40,173 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 05:24:45] 2026-02-04 04:24:40,173 | INFO     | [monitor] control thread has ended
[2026-02-04 05:24:45] 2026-02-04 04:24:44,851 | INFO     | all workflow threads have been joined
[2026-02-04 05:24:45] 2026-02-04 04:24:44,852 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 05:24:45] 2026-02-04 04:24:44,852 | INFO     | traces error code: 0
[2026-02-04 05:24:45] 2026-02-04 04:24:44,852 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 05:24:45] 2026-02-04 04:24:44,968 [wrapper] ==== pilot stdout END ====
[2026-02-04 05:24:45] 2026-02-04 04:24:44,970 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 05:24:45] 2026-02-04 04:24:44,973 [wrapper] pilotpid: 1942889
[2026-02-04 05:24:45] 2026-02-04 04:24:44,975 [wrapper] Pilot exit status: 0
[2026-02-04 05:24:45] 2026-02-04 04:24:44,984 [wrapper] pandaids: 6994197497
[2026-02-04 05:24:45] 2026-02-04 04:24:45,035 [wrapper] cleanup supervisor_pilot 2138045 1942890
[2026-02-04 05:24:45] 2026-02-04 04:24:45,037 [wrapper] Test setup, not cleaning
[2026-02-04 05:24:45] 2026-02-04 04:24:45,040 [wrapper] apfmon messages muted
[2026-02-04 05:24:45] 2026-02-04 04:24:45,042 [wrapper] ==== wrapper stdout END ====
[2026-02-04 05:24:45] 2026-02-04 04:24:45,044 [wrapper] ==== wrapper stderr END ====
[2026-02-04 05:24:45]  *** Error codes and diagnostics ***
[2026-02-04 05:24:45]     "exeErrorCode": 0,
[2026-02-04 05:24:45]     "exeErrorDiag": "",
[2026-02-04 05:24:45]     "pilotErrorCode": 0,
[2026-02-04 05:24:45]     "pilotErrorDiag": "",
[2026-02-04 05:24:45]  *** Listing of results directory ***
[2026-02-04 05:24:45] total 678436
[2026-02-04 05:24:45] -rwx------ 1 boinc boinc     36322 Feb  3 16:14 runpilot2-wrapper.sh
[2026-02-04 05:24:45] -rw-r--r-- 1 boinc boinc    584422 Feb  3 16:18 pilot3.tar.gz
[2026-02-04 05:24:45] -rw-r--r-- 1 boinc boinc      5111 Feb  3 16:18 queuedata.json
[2026-02-04 05:24:45] -rw-r--r-- 1 boinc boinc       100 Feb  3 22:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 05:24:45] -rwxr-xr-x 1 boinc boinc      7986 Feb  3 22:43 run_atlas
[2026-02-04 05:24:45] -rw-r--r-- 1 boinc boinc       105 Feb  3 22:43 job.xml
[2026-02-04 05:24:45] -rw-r--r-- 2 boinc boinc 497626458 Feb  4 00:45 EVNT.48318040._000154.pool.root.1
[2026-02-04 05:24:45] -rw-r--r-- 1 boinc boinc      6423 Feb  4 00:45 init_data.xml
[2026-02-04 05:24:45] -rw-r--r-- 2 boinc boinc     15845 Feb  4 00:45 start_atlas.sh
[2026-02-04 05:24:45] drwxrwx--x 2 boinc boinc      4096 Feb  4 00:45 shared
[2026-02-04 05:24:45] -rw-r--r-- 2 boinc boinc    597759 Feb  4 00:45 input.tar.gz
[2026-02-04 05:24:45] -rw-r--r-- 1 boinc boinc         0 Feb  4 00:45 boinc_lockfile
[2026-02-04 05:24:45] -rw-r--r-- 1 boinc boinc      2536 Feb  4 00:45 pandaJob.out
[2026-02-04 05:24:45] -rw------- 1 boinc boinc   1009236 Feb  4 00:46 agis_schedconf.cvmfs.json
[2026-02-04 05:24:45] -rw------- 1 boinc boinc       453 Feb  4 00:46 workernode_map.json
[2026-02-04 05:24:45] drwx------ 5 boinc boinc      4096 Feb  4 00:46 pilot3
[2026-02-04 05:24:45] -rw------- 1 boinc boinc 187573148 Feb  4 05:23 HITS.48318042._007950.pool.root.1
[2026-02-04 05:24:45] -rw-r--r-- 1 boinc boinc       531 Feb  4 05:23 boinc_task_state.xml
[2026-02-04 05:24:45] -rw------- 1 boinc boinc      1038 Feb  4 05:23 memory_monitor_summary.json
[2026-02-04 05:24:45] -rw------- 1 boinc boinc   1511668 Feb  4 05:23 agis_ddmendpoints.agis.ALL.json
[2026-02-04 05:24:45] -rw------- 1 boinc boinc    462727 Feb  4 05:23 log.48318042._007950.job.log.tgz.1
[2026-02-04 05:24:45] -rw------- 1 boinc boinc        95 Feb  4 05:23 pilot_heartbeat.json
[2026-02-04 05:24:45] -rw------- 1 boinc boinc      6409 Feb  4 05:23 heartbeat.json
[2026-02-04 05:24:45] -rw-r--r-- 1 boinc boinc      8192 Feb  4 05:24 boinc_mmap_file
[2026-02-04 05:24:45] -rw-r--r-- 1 boinc boinc        28 Feb  4 05:24 wrapper_checkpoint.txt
[2026-02-04 05:24:45] -rw------- 1 boinc boinc      4830 Feb  4 05:24 pilotlog.txt
[2026-02-04 05:24:45] -rw------- 1 boinc boinc   2329401 Feb  4 05:24 log.48318042._007950.job.log.1
[2026-02-04 05:24:45] -rw------- 1 boinc boinc       357 Feb  4 05:24 output.list
[2026-02-04 05:24:45] -rw-r--r-- 1 boinc boinc       620 Feb  4 05:24 runtime_log
[2026-02-04 05:24:45] -rw------- 1 boinc boinc   2805760 Feb  4 05:24 result.tar.gz
[2026-02-04 05:24:45] -rw-r--r-- 1 boinc boinc      9205 Feb  4 05:24 runtime_log.err
[2026-02-04 05:24:45] -rw------- 1 boinc boinc       666 Feb  4 05:24 KOvLDmiHX78nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmSQVKDm5thZ2n.diag
[2026-02-04 05:24:45] -rw-r--r-- 1 boinc boinc     21149 Feb  4 05:24 stderr.txt
[2026-02-04 05:24:45] HITS file was successfully produced:
[2026-02-04 05:24:45] -rw------- 1 boinc boinc 187573148 Feb  4 05:23 shared/HITS.pool.root.1
[2026-02-04 05:24:45]  *** Contents of shared directory: ***
[2026-02-04 05:24:45] total 672492
[2026-02-04 05:24:45] -rw-r--r-- 2 boinc boinc 497626458 Feb  4 00:45 ATLAS.root_0
[2026-02-04 05:24:45] -rw-r--r-- 2 boinc boinc     15845 Feb  4 00:45 start_atlas.sh
[2026-02-04 05:24:45] -rw-r--r-- 2 boinc boinc    597759 Feb  4 00:45 input.tar.gz
[2026-02-04 05:24:45] -rw------- 1 boinc boinc 187573148 Feb  4 05:23 HITS.pool.root.1
[2026-02-04 05:24:45] -rw------- 1 boinc boinc   2805760 Feb  4 05:24 result.tar.gz
05:24:46 (1938233): run_atlas exited; CPU time 62407.142384
05:24:46 (1938233): called boinc_finish(0)

</stderr_txt>
]]>

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