Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
13:10:38 (30836): wrapper (7.7.26015): starting
13:10:38 (30836): wrapper: running run_atlas (--nthreads 8)
[2026-02-04 13:10:38] Arguments: --nthreads 8
[2026-02-04 13:10:38] Threads: 8
[2026-02-04 13:10:38] Checking for CVMFS
[2026-02-04 13:10:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-04 13:10:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-04 13:10:42] Running cvmfs_config stat atlas.cern.ch
[2026-02-04 13:10:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-04 13:10:43] 2.13.3.0 16885 161 46812 155850 0 50 2531027 4096000 0 130560 0 41961 99.952 8223 80 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://131.225.189.146:3126 1
[2026-02-04 13:10:43] CVMFS is ok
[2026-02-04 13:10:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 13:10:43] Checking for apptainer binary...
[2026-02-04 13:10:43] apptainer is not installed, using version from CVMFS
[2026-02-04 13:10:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 13:10:55] gp
[2026-02-04 13:10:55] apptainer works
[2026-02-04 13:10:55] Set ATHENA_PROC_NUMBER=8
[2026-02-04 13:10:55] Set ATHENA_CORE_NUMBER=8
[2026-02-04 13:10:55] Starting ATLAS job with PandaID=6999844847
[2026-02-04 13:10:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 16:10:06]  *** The last 200 lines of the pilot log: ***
[2026-02-04 16:10:06] 2026-02-04 05:07:06,905 | INFO     | number of running child processes to parent process 39296: 1
[2026-02-04 16:10:06] 2026-02-04 05:07:06,905 | INFO     | maximum number of monitored processes: 6
[2026-02-04 16:10:06] 2026-02-04 05:07:07,046 | INFO     | time since job start (10535s) is within the limit (349056.0s)
[2026-02-04 16:10:06] 2026-02-04 05:07:08,550 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-02-04 16:10:06] 2026-02-04 05:07:08,551 | INFO     | reading metadata from: /var/lib/boinc-client/slots/8/PanDA_Pilot-6999844847/jobReport.json
[2026-02-04 16:10:06] 2026-02-04 05:07:08,555 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/8/workernode_map.json
[2026-02-04 16:10:06] 2026-02-04 05:07:08,555 | INFO     | this job has now completed (state=finished)
[2026-02-04 16:10:06] 2026-02-04 05:07:08,556 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-04 16:10:06] 2026-02-04 05:07:08,556 | INFO     | log transfer has been attempted: DONE
[2026-02-04 16:10:06] 2026-02-04 05:07:08,556 | INFO     | job 6999844847 has finished - writing final server update
[2026-02-04 16:10:06] 2026-02-04 05:07:08,556 | INFO     | total number of processed events: 400 (read)
[2026-02-04 16:10:06] 2026-02-04 05:07:08,560 | INFO     | using path: /var/lib/boinc-client/slots/8/PanDA_Pilot-6999844847/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 16:10:06] 2026-02-04 05:07:08,562 | INFO     | extracted standard info from prmon json
[2026-02-04 16:10:06] 2026-02-04 05:07:08,562 | INFO     | extracted standard memory fields from prmon json
[2026-02-04 16:10:06] 2026-02-04 05:07:08,562 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-04 16:10:06] 2026-02-04 05:07:08,563 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-04 16:10:06] 2026-02-04 05:07:08,563 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-04 16:10:06] 2026-02-04 05:07:08,568 | INFO     | fitting pss+swap vs Time
[2026-02-04 16:10:06] 2026-02-04 05:07:08,569 | INFO     | sum of square deviations: 1605470102.0
[2026-02-04 16:10:06] 2026-02-04 05:07:08,571 | INFO     | sum of deviations: 17537169257.999992
[2026-02-04 16:10:06] 2026-02-04 05:07:08,571 | INFO     | mean x: 1770176366.0
[2026-02-04 16:10:06] 2026-02-04 05:07:08,571 | INFO     | mean y: 2524067.3699421966
[2026-02-04 16:10:06] 2026-02-04 05:07:08,571 | INFO     | intersect: -19333795250.181164
[2026-02-04 16:10:06] 2026-02-04 05:07:08,572 | INFO     | chi2: 2.919751718025355
[2026-02-04 16:10:06] 2026-02-04 05:07:08,573 | INFO     | sum of square deviations: 1470248962.0
[2026-02-04 16:10:06] 2026-02-04 05:07:08,574 | INFO     | sum of deviations: 28333860140.499992
[2026-02-04 16:10:06] 2026-02-04 05:07:08,574 | INFO     | mean x: 1770176213.5
[2026-02-04 16:10:06] 2026-02-04 05:07:08,575 | INFO     | mean y: 2535956.339285714
[2026-02-04 16:10:06] 2026-02-04 05:07:08,575 | INFO     | intersect: -34111363494.486412
[2026-02-04 16:10:06] 2026-02-04 05:07:08,575 | INFO     | chi2: 2.248196198222208
[2026-02-04 16:10:06] 2026-02-04 05:07:08,576 | INFO     | current chi2=2.248196198222208 (change=23.00043238804304 %)
[2026-02-04 16:10:06] 2026-02-04 05:07:08,576 | INFO     | right removable region: 167
[2026-02-04 16:10:06] 2026-02-04 05:07:08,576 | INFO     | sum of square deviations: 1470248962.0
[2026-02-04 16:10:06] 2026-02-04 05:07:08,578 | INFO     | sum of deviations: -22327725629.0
[2026-02-04 16:10:06] 2026-02-04 05:07:08,578 | INFO     | mean x: 1770176518.5
[2026-02-04 16:10:06] 2026-02-04 05:07:08,578 | INFO     | mean y: 2568840.9404761903
[2026-02-04 16:10:06] 2026-02-04 05:07:08,579 | INFO     | intersect: 26885101419.777584
[2026-02-04 16:10:06] 2026-02-04 05:07:08,579 | INFO     | chi2: 0.8074145765540299
[2026-02-04 16:10:06] 2026-02-04 05:07:08,579 | INFO     | current chi2=0.8074145765540299 (change=72.34646454459185 %)
[2026-02-04 16:10:06] 2026-02-04 05:07:08,580 | INFO     | sum of square deviations: 1342841922.0
[2026-02-04 16:10:06] 2026-02-04 05:07:08,581 | INFO     | sum of deviations: -28007320522.0
[2026-02-04 16:10:06] 2026-02-04 05:07:08,582 | INFO     | mean x: 1770176671.0
[2026-02-04 16:10:06] 2026-02-04 05:07:08,582 | INFO     | mean y: 2575568.0
[2026-02-04 16:10:06] 2026-02-04 05:07:08,582 | INFO     | intersect: 36922710837.104256
[2026-02-04 16:10:06] 2026-02-04 05:07:08,582 | INFO     | chi2: 0.7213915593952583
[2026-02-04 16:10:06] 2026-02-04 05:07:08,583 | INFO     | current chi2=0.7213915593952583 (change=10.654132295444777 %)
[2026-02-04 16:10:06] 2026-02-04 05:07:08,583 | INFO     | left removable region: 20
[2026-02-04 16:10:06] 2026-02-04 05:07:08,583 | INFO     | sum of square deviations: 984941258.0
[2026-02-04 16:10:06] 2026-02-04 05:07:08,585 | INFO     | sum of deviations: -15788749255.000002
[2026-02-04 16:10:06] 2026-02-04 05:07:08,585 | INFO     | mean x: 1770176793.0
[2026-02-04 16:10:06] 2026-02-04 05:07:08,585 | INFO     | mean y: 2589303.7278911564
[2026-02-04 16:10:06] 2026-02-04 05:07:08,585 | INFO     | intersect: 28378776507.46978
[2026-02-04 16:10:06] 2026-02-04 05:07:08,586 | INFO     | chi2: 0.020643001736679788
[2026-02-04 16:10:06] 2026-02-04 05:07:08,586 | INFO     | current memory leak: -16.03 B/s (using 147 data points, chi2=0.02)
[2026-02-04 16:10:06] 2026-02-04 05:07:08,587 | INFO     | could have reported an average CPU frequency of 1467 MHz (9 samples)
[2026-02-04 16:10:06] 2026-02-04 05:07:08,587 | INFO     | ..............................
[2026-02-04 16:10:06] 2026-02-04 05:07:08,587 | INFO     | . Timing measurements:
[2026-02-04 16:10:06] 2026-02-04 05:07:08,588 | INFO     | . get job = 0 s
[2026-02-04 16:10:06] 2026-02-04 05:07:08,588 | INFO     | . initial setup = 12 s
[2026-02-04 16:10:06] 2026-02-04 05:07:08,588 | INFO     | . payload setup = 10 s
[2026-02-04 16:10:06] 2026-02-04 05:07:08,588 | INFO     | . stage-in = 0 s
[2026-02-04 16:10:06] 2026-02-04 05:07:08,588 | INFO     | . payload execution = 10504 s
[2026-02-04 16:10:06] 2026-02-04 05:07:08,588 | INFO     | . stage-out = 1 s
[2026-02-04 16:10:06] 2026-02-04 05:07:08,588 | INFO     | . log creation = 0 s
[2026-02-04 16:10:06] 2026-02-04 05:07:08,589 | INFO     | ..............................
[2026-02-04 16:10:06] 2026-02-04 05:07:08,832 | INFO     | 
[2026-02-04 16:10:06] 2026-02-04 05:07:08,832 | INFO     | job summary report
[2026-02-04 16:10:06] 2026-02-04 05:07:08,832 | INFO     | --------------------------------------------------
[2026-02-04 16:10:06] 2026-02-04 05:07:08,832 | INFO     | PanDA job id: 6999844847
[2026-02-04 16:10:06] 2026-02-04 05:07:08,832 | INFO     | task id: 48317892
[2026-02-04 16:10:06] 2026-02-04 05:07:08,833 | INFO     | errors: (none)
[2026-02-04 16:10:06] 2026-02-04 05:07:08,833 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 16:10:06] 2026-02-04 05:07:08,833 | INFO     | pilot state: finished 
[2026-02-04 16:10:06] 2026-02-04 05:07:08,833 | INFO     | transexitcode: 0
[2026-02-04 16:10:06] 2026-02-04 05:07:08,833 | INFO     | exeerrorcode: 0
[2026-02-04 16:10:06] 2026-02-04 05:07:08,833 | INFO     | exeerrordiag: 
[2026-02-04 16:10:06] 2026-02-04 05:07:08,833 | INFO     | exitcode: 0
[2026-02-04 16:10:06] 2026-02-04 05:07:08,833 | INFO     | exitmsg: OK
[2026-02-04 16:10:06] 2026-02-04 05:07:08,834 | INFO     | cpuconsumptiontime: 74829 s
[2026-02-04 16:10:06] 2026-02-04 05:07:08,834 | INFO     | nevents: 400
[2026-02-04 16:10:06] 2026-02-04 05:07:08,834 | INFO     | neventsw: 0
[2026-02-04 16:10:06] 2026-02-04 05:07:08,834 | INFO     | pid: 39296
[2026-02-04 16:10:06] 2026-02-04 05:07:08,834 | INFO     | pgrp: 39296
[2026-02-04 16:10:06] 2026-02-04 05:07:08,834 | INFO     | corecount: 8
[2026-02-04 16:10:06] 2026-02-04 05:07:08,834 | INFO     | event service: False
[2026-02-04 16:10:06] 2026-02-04 05:07:08,834 | INFO     | sizes: {0: 2278024, 1: 2278230, 11: 2278258, 10518: 2306965, 10520: 2316033, 10524: 2316235}
[2026-02-04 16:10:06] 2026-02-04 05:07:08,835 | INFO     | --------------------------------------------------
[2026-02-04 16:10:06] 2026-02-04 05:07:08,835 | INFO     | 
[2026-02-04 16:10:06] 2026-02-04 05:07:08,835 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/8
[2026-02-04 16:10:06] 2026-02-04 05:07:08,885 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 16:10:06] 2026-02-04 05:07:08,885 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 16:10:06] 2026-02-04 05:07:08,886 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 16:10:06] 2026-02-04 05:07:08,886 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 16:10:06] 2026-02-04 05:07:08,886 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 16:10:06] 2026-02-04 05:07:08,886 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 16:10:06] 2026-02-04 05:07:08,886 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 16:10:06] 2026-02-04 05:07:08,886 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 16:10:06] 2026-02-04 05:07:08,886 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 16:10:06] 2026-02-04 05:07:08,887 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 16:10:06] 2026-02-04 05:07:08,887 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 16:10:06] 2026-02-04 05:07:08,887 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 16:10:06] 2026-02-04 05:07:08,887 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 16:10:06] 2026-02-04 05:07:08,887 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 16:10:06] 2026-02-04 05:07:08,887 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 16:10:06] 2026-02-04 05:07:08,887 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 16:10:06] 2026-02-04 05:07:08,888 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 16:10:06] 2026-02-04 05:07:08,888 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 16:10:06] 2026-02-04 05:07:08,888 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 16:10:06] 2026-02-04 05:07:08,888 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 16:10:06] 2026-02-04 05:07:08,888 | INFO     | job 6999844847 has completed (purged errors)
[2026-02-04 16:10:06] 2026-02-04 05:07:08,889 | INFO     | overall cleanup function is called
[2026-02-04 16:10:06] 2026-02-04 05:07:09,899 | INFO     | --- collectZombieJob: --- 10, [39296]
[2026-02-04 16:10:06] 2026-02-04 05:07:09,899 | INFO     | zombie collector waiting for pid 39296
[2026-02-04 16:10:06] 2026-02-04 05:07:09,899 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 16:10:06] 2026-02-04 05:07:09,899 | INFO     | collected zombie processes
[2026-02-04 16:10:06] 2026-02-04 05:07:09,899 | INFO     | will attempt to kill all subprocesses of pid=39296
[2026-02-04 16:10:06] 2026-02-04 05:07:10,065 | INFO     | process IDs to be killed: [39296] (in reverse order)
[2026-02-04 16:10:06] 2026-02-04 05:07:10,167 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 16:10:06] 2026-02-04 05:07:10,168 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 16:10:06] 2026-02-04 05:07:10,172 | INFO     | did not find any defunct processes belonging to 39296
[2026-02-04 16:10:06] 2026-02-04 05:07:10,178 | INFO     | did not find any defunct processes belonging to 39296
[2026-02-04 16:10:06] 2026-02-04 05:07:10,178 | INFO     | ready for new job
[2026-02-04 16:10:06] 2026-02-04 05:07:10,179 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 16:10:06] 2026-02-04 05:07:10,182 | INFO     | **************************************
[2026-02-04 16:10:06] 2026-02-04 05:07:10,183 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 16:10:06] 2026-02-04 05:07:10,183 | INFO     | **************************************
[2026-02-04 16:10:06] 2026-02-04 05:07:10,183 | INFO     | 
[2026-02-04 16:10:06] 2026-02-04 05:07:10,184 | INFO     | architecture information:
[2026-02-04 16:10:06] 2026-02-04 05:07:10,185 | INFO     | executing command: cat /etc/os-release
[2026-02-04 16:10:06] 2026-02-04 05:07:10,218 | INFO     | cat /etc/os-release:
[2026-02-04 16:10:06] NAME="CentOS Linux"
[2026-02-04 16:10:06] VERSION="7 (Core)"
[2026-02-04 16:10:06] ID="centos"
[2026-02-04 16:10:06] ID_LIKE="rhel fedora"
[2026-02-04 16:10:06] VERSION_ID="7"
[2026-02-04 16:10:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 16:10:06] ANSI_COLOR="0;31"
[2026-02-04 16:10:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 16:10:06] HOME_URL="https://www.centos.org/"
[2026-02-04 16:10:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 16:10:06] 
[2026-02-04 16:10:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 16:10:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 16:10:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 16:10:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 16:10:06] 
[2026-02-04 16:10:06] 2026-02-04 05:07:10,218 | INFO     | **************************************
[2026-02-04 16:10:06] 2026-02-04 05:07:10,721 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/8
[2026-02-04 16:10:06] 2026-02-04 05:07:10,758 | INFO     | sufficient remaining disk space (26930577408 B)
[2026-02-04 16:10:06] 2026-02-04 05:07:10,758 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 16:10:06] 2026-02-04 05:07:10,759 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 16:10:06] 2026-02-04 05:07:10,759 | INFO     | update_server=False
[2026-02-04 16:10:06] 2026-02-04 05:07:10,759 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 16:10:06] 2026-02-04 05:07:10,759 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 16:10:06] 2026-02-04 05:07:10,760 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 16:10:06] 2026-02-04 05:07:10,760 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 16:10:06] 2026-02-04 05:07:10,760 | INFO     | aborting loop
[2026-02-04 16:10:06] 2026-02-04 05:07:11,718 | INFO     | all payload control threads have been joined
[2026-02-04 16:10:06] 2026-02-04 05:07:11,764 | INFO     | [job] retrieve thread has finished
[2026-02-04 16:10:06] 2026-02-04 05:07:11,765 | INFO     | [job] job monitor thread has finished
[2026-02-04 16:10:06] 2026-02-04 05:07:11,845 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 16:10:06] 2026-02-04 05:07:11,853 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 16:10:06] 2026-02-04 05:07:11,857 | INFO     | all data control threads have been joined
[2026-02-04 16:10:06] 2026-02-04 05:07:12,005 | INFO     | [payload] failed_post thread has finished
[2026-02-04 16:10:06] 2026-02-04 05:07:12,068 | INFO     | all job control threads have been joined
[2026-02-04 16:10:06] 2026-02-04 05:07:12,308 | INFO     | [data] copytool_in thread has finished
[2026-02-04 16:10:06] 2026-02-04 05:07:12,527 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 16:10:06] 2026-02-04 05:07:12,723 | INFO     | [payload] control thread has finished
[2026-02-04 16:10:06] 2026-02-04 05:07:12,765 | INFO     | [data] copytool_out thread has finished
[2026-02-04 16:10:06] 2026-02-04 05:07:12,862 | INFO     | [data] control thread has finished
[2026-02-04 16:10:06] 2026-02-04 05:07:13,029 | INFO     | [job] validate thread has finished
[2026-02-04 16:10:06] 2026-02-04 05:07:13,074 | INFO     | [job] control thread has finished
[2026-02-04 16:10:06] 2026-02-04 05:07:13,269 | INFO     | [payload] validate_post thread has finished
[2026-02-04 16:10:06] 2026-02-04 05:07:13,749 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 16:10:06] 2026-02-04 05:07:14,754 | INFO     | [job] queue monitor thread has finished
[2026-02-04 16:10:06] 2026-02-04 05:07:14,766 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 16:10:06] 2026-02-04 05:07:21,609 | INFO     | job.realtimelogging is not enabled
[2026-02-04 16:10:06] 2026-02-04 05:07:22,614 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 16:10:06] 2026-02-04 05:07:40,308 | INFO     | PID=34887 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-04 16:10:06] 2026-02-04 05:07:40,308 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 16:10:06] 2026-02-04 05:07:40,308 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 16:10:06] 2026-02-04 05:07:40,309 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 16:10:06] 2026-02-04 05:07:49,611 | INFO     | [monitor] cgroup control has ended
[2026-02-04 16:10:06] 2026-02-04 05:07:50,986 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135297922258752)>', '<ExcThread(monitor, started 135297593476864)>']
[2026-02-04 16:10:06] 2026-02-04 05:07:51,364 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 16:10:06] 2026-02-04 05:07:51,364 | INFO     | [monitor] control thread has ended
[2026-02-04 16:10:06] 2026-02-04 05:07:56,011 | INFO     | all workflow threads have been joined
[2026-02-04 16:10:06] 2026-02-04 05:07:56,011 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 16:10:06] 2026-02-04 05:07:56,011 | INFO     | traces error code: 0
[2026-02-04 16:10:06] 2026-02-04 05:07:56,012 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 16:10:06] 2026-02-04 05:07:56,247 [wrapper] ==== pilot stdout END ====
[2026-02-04 16:10:06] 2026-02-04 05:07:56,253 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 16:10:06] 2026-02-04 05:07:56,258 [wrapper] pilotpid: 34887
[2026-02-04 16:10:06] 2026-02-04 05:07:56,264 [wrapper] Pilot exit status: 0
[2026-02-04 16:10:06] 2026-02-04 05:07:56,286 [wrapper] pandaids: 6999844847
[2026-02-04 16:10:06] 2026-02-04 05:07:56,352 [wrapper] cleanup supervisor_pilot   45374 34888
[2026-02-04 16:10:06] 2026-02-04 05:07:56,358 [wrapper] Test setup, not cleaning
[2026-02-04 16:10:06] 2026-02-04 05:07:56,364 [wrapper] apfmon messages muted
[2026-02-04 16:10:06] 2026-02-04 05:07:56,370 [wrapper] ==== wrapper stdout END ====
[2026-02-04 16:10:06] 2026-02-04 05:07:56,377 [wrapper] ==== wrapper stderr END ====
[2026-02-04 16:10:06]  *** Error codes and diagnostics ***
[2026-02-04 16:10:06]     "exeErrorCode": 0,
[2026-02-04 16:10:06]     "exeErrorDiag": "",
[2026-02-04 16:10:06]     "pilotErrorCode": 0,
[2026-02-04 16:10:06]     "pilotErrorDiag": "",
[2026-02-04 16:10:06]  *** Listing of results directory ***
[2026-02-04 16:10:06] total 683284
[2026-02-04 16:10:06] -rw-r--r-- 1 boinc boinc    584422 Feb  4 04:15 pilot3.tar.gz
[2026-02-04 16:10:06] -rwx------ 1 boinc boinc     36322 Feb  4 04:15 runpilot2-wrapper.sh
[2026-02-04 16:10:06] -rw-r--r-- 1 boinc boinc      5111 Feb  4 04:16 queuedata.json
[2026-02-04 16:10:06] -rw-r--r-- 1 boinc boinc       100 Feb  4 13:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 16:10:06] -rwxr-xr-x 1 boinc boinc      7986 Feb  4 13:10 run_atlas
[2026-02-04 16:10:06] -rw-r--r-- 1 boinc boinc       105 Feb  4 13:10 job.xml
[2026-02-04 16:10:06] -rw-r--r-- 2 boinc boinc 502131973 Feb  4 13:10 EVNT.48317889._000221.pool.root.1
[2026-02-04 16:10:06] -rw-r--r-- 2 boinc boinc    597754 Feb  4 13:10 input.tar.gz
[2026-02-04 16:10:06] -rw-r--r-- 2 boinc boinc     15845 Feb  4 13:10 start_atlas.sh
[2026-02-04 16:10:06] drwxrwx--x 2 boinc boinc      4096 Feb  4 13:10 shared
[2026-02-04 16:10:06] -rw-r--r-- 1 boinc boinc         0 Feb  4 13:10 boinc_setup_complete
[2026-02-04 16:10:06] -rw-r--r-- 1 boinc boinc      9217 Feb  4 13:10 init_data.xml
[2026-02-04 16:10:06] -rw-r--r-- 1 boinc boinc         0 Feb  4 13:10 boinc_lockfile
[2026-02-04 16:10:06] -rw-r--r-- 1 boinc boinc      2522 Feb  4 13:10 pandaJob.out
[2026-02-04 16:10:06] -rw------- 1 boinc boinc   1009228 Feb  4 13:11 agis_schedconf.cvmfs.json
[2026-02-04 16:10:06] -rw------- 1 boinc boinc   1511668 Feb  4 13:11 agis_ddmendpoints.agis.ALL.json
[2026-02-04 16:10:06] -rw------- 1 boinc boinc       417 Feb  4 13:11 workernode_map.json
[2026-02-04 16:10:06] drwx------ 5 boinc boinc      4096 Feb  4 13:11 pilot3
[2026-02-04 16:10:06] -rw------- 1 boinc boinc 189848045 Feb  4 16:06 HITS.48317892._011639.pool.root.1
[2026-02-04 16:10:06] -rw-r--r-- 1 boinc boinc       530 Feb  4 16:06 boinc_task_state.xml
[2026-02-04 16:10:06] -rw------- 1 boinc boinc        95 Feb  4 16:06 pilot_heartbeat.json
[2026-02-04 16:10:06] -rw------- 1 boinc boinc      1033 Feb  4 16:06 memory_monitor_summary.json
[2026-02-04 16:10:06] -rw------- 1 boinc boinc    424898 Feb  4 16:07 log.48317892._011639.job.log.tgz.1
[2026-02-04 16:10:06] -rw------- 1 boinc boinc      6325 Feb  4 16:07 heartbeat.json
[2026-02-04 16:10:06] -rw------- 1 boinc boinc      4821 Feb  4 16:07 pilotlog.txt
[2026-02-04 16:10:06] -rw------- 1 boinc boinc   1456305 Feb  4 16:07 log.48317892._011639.job.log.1
[2026-02-04 16:10:06] -rw------- 1 boinc boinc       357 Feb  4 16:07 output.list
[2026-02-04 16:10:06] -rw-r--r-- 1 boinc boinc       620 Feb  4 16:07 runtime_log
[2026-02-04 16:10:06] -rw------- 1 boinc boinc   1894400 Feb  4 16:07 result.tar.gz
[2026-02-04 16:10:06] -rw------- 1 boinc boinc       642 Feb  4 16:07 YO0MDm8AZ78nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmnUVKDm6nZMwn.diag
[2026-02-04 16:10:06] -rw-r--r-- 1 boinc boinc      8864 Feb  4 16:07 runtime_log.err
[2026-02-04 16:10:06] -rw-r--r-- 1 boinc boinc        27 Feb  4 16:09 wrapper_checkpoint.txt
[2026-02-04 16:10:06] -rw-r--r-- 1 boinc boinc      8192 Feb  4 16:10 boinc_mmap_file
[2026-02-04 16:10:06] -rw-r--r-- 1 boinc boinc     20947 Feb  4 16:10 stderr.txt
[2026-02-04 16:10:06] HITS file was successfully produced:
[2026-02-04 16:10:06] -rw------- 1 boinc boinc 189848045 Feb  4 16:06 shared/HITS.pool.root.1
[2026-02-04 16:10:06]  *** Contents of shared directory: ***
[2026-02-04 16:10:06] total 678224
[2026-02-04 16:10:06] -rw-r--r-- 2 boinc boinc 502131973 Feb  4 13:10 ATLAS.root_0
[2026-02-04 16:10:06] -rw-r--r-- 2 boinc boinc    597754 Feb  4 13:10 input.tar.gz
[2026-02-04 16:10:06] -rw-r--r-- 2 boinc boinc     15845 Feb  4 13:10 start_atlas.sh
[2026-02-04 16:10:06] -rw------- 1 boinc boinc 189848045 Feb  4 16:06 HITS.pool.root.1
[2026-02-04 16:10:06] -rw------- 1 boinc boinc   1894400 Feb  4 16:07 result.tar.gz
16:10:08 (30836): run_atlas exited; CPU time 74958.012482
16:10:08 (30836): called boinc_finish(0)

</stderr_txt>
]]>

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