Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:35:13 (28240): wrapper (7.7.26015): starting
08:35:13 (28240): wrapper: running run_atlas (--nthreads 8)
[2026-02-04 08:35:13] Arguments: --nthreads 8
[2026-02-04 08:35:13] Threads: 8
[2026-02-04 08:35:13] Checking for CVMFS
[2026-02-04 08:35:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-04 08:35:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-04 08:35:17] Running cvmfs_config stat atlas.cern.ch
[2026-02-04 08:35:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-04 08:35:18] 2.11.2.0 6978 72545 136028 155860 2 53 23370331 25165824 96 130560 0 24839677 99.821 17100032 3434 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-02-04 08:35:18] CVMFS is ok
[2026-02-04 08:35:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 08:35:19] Checking for apptainer binary...
[2026-02-04 08:35:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-04 08:35:19] Running /usr/bin/apptainer --version
[2026-02-04 08:35:19] apptainer version 1.3.2-1.el7
[2026-02-04 08:35:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 08:35:28] cg-vwn361.simple-grid.lan
[2026-02-04 08:35:28] apptainer works
[2026-02-04 08:35:28] Set ATHENA_PROC_NUMBER=8
[2026-02-04 08:35:28] Set ATHENA_CORE_NUMBER=8
[2026-02-04 08:35:28] Starting ATLAS job with PandaID=6994197878
[2026-02-04 08:35:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 13:09:16]  *** The last 200 lines of the pilot log: ***
[2026-02-04 13:09:16] 2026-02-04 12:08:12,043 | INFO     | total number of processed events: 400 (read)
[2026-02-04 13:09:16] 2026-02-04 12:08:12,045 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6994197878/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 13:09:16] 2026-02-04 12:08:12,046 | INFO     | extracted standard info from prmon json
[2026-02-04 13:09:16] 2026-02-04 12:08:12,046 | INFO     | extracted standard memory fields from prmon json
[2026-02-04 13:09:16] 2026-02-04 12:08:12,046 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-04 13:09:16] 2026-02-04 12:08:12,046 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-04 13:09:16] 2026-02-04 12:08:12,047 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-04 13:09:16] 2026-02-04 12:08:12,052 | INFO     | fitting pss+swap vs Time
[2026-02-04 13:09:16] 2026-02-04 12:08:12,052 | INFO     | sum of square deviations: 5325139844.5
[2026-02-04 13:09:16] 2026-02-04 12:08:12,055 | INFO     | sum of deviations: 123170490448.00002
[2026-02-04 13:09:16] 2026-02-04 12:08:12,055 | INFO     | mean x: 1770199020.5
[2026-02-04 13:09:16] 2026-02-04 12:08:12,055 | INFO     | mean y: 2422553.2248062016
[2026-02-04 13:09:16] 2026-02-04 12:08:12,055 | INFO     | intersect: -40942282733.857956
[2026-02-04 13:09:16] 2026-02-04 12:08:12,056 | INFO     | chi2: 8.106641041444496
[2026-02-04 13:09:16] 2026-02-04 12:08:12,056 | INFO     | sum of square deviations: 5021496942.0
[2026-02-04 13:09:16] 2026-02-04 12:08:12,059 | INFO     | sum of deviations: 137471038563.0001
[2026-02-04 13:09:16] 2026-02-04 12:08:12,059 | INFO     | mean x: 1770198868.0
[2026-02-04 13:09:16] 2026-02-04 12:08:12,059 | INFO     | mean y: 2429600.699604743
[2026-02-04 13:09:16] 2026-02-04 12:08:12,059 | INFO     | intersect: -48459429414.21068
[2026-02-04 13:09:16] 2026-02-04 12:08:12,060 | INFO     | chi2: 7.402075969439703
[2026-02-04 13:09:16] 2026-02-04 12:08:12,060 | INFO     | current chi2=7.402075969439703 (change=8.69120845986353 %)
[2026-02-04 13:09:16] 2026-02-04 12:08:12,060 | INFO     | right removable region: 252
[2026-02-04 13:09:16] 2026-02-04 12:08:12,060 | INFO     | sum of square deviations: 5021496942.0
[2026-02-04 13:09:16] 2026-02-04 12:08:12,063 | INFO     | sum of deviations: 34345909028.999996
[2026-02-04 13:09:16] 2026-02-04 12:08:12,063 | INFO     | mean x: 1770199173.0
[2026-02-04 13:09:16] 2026-02-04 12:08:12,063 | INFO     | mean y: 2467132.782608696
[2026-02-04 13:09:16] 2026-02-04 12:08:12,063 | INFO     | intersect: -12105296839.060717
[2026-02-04 13:09:16] 2026-02-04 12:08:12,064 | INFO     | chi2: 3.193738078978764
[2026-02-04 13:09:16] 2026-02-04 12:08:12,064 | INFO     | current chi2=3.193738078978764 (change=60.60343534824032 %)
[2026-02-04 13:09:16] 2026-02-04 12:08:12,064 | INFO     | sum of square deviations: 4729621702.0
[2026-02-04 13:09:16] 2026-02-04 12:08:12,067 | INFO     | sum of deviations: -26417123783.0
[2026-02-04 13:09:16] 2026-02-04 12:08:12,067 | INFO     | mean x: 1770199325.5
[2026-02-04 13:09:16] 2026-02-04 12:08:12,067 | INFO     | mean y: 2498809.330645161
[2026-02-04 13:09:16] 2026-02-04 12:08:12,067 | INFO     | intersect: 9889880432.79999
[2026-02-04 13:09:16] 2026-02-04 12:08:12,068 | INFO     | chi2: 0.9721674708505813
[2026-02-04 13:09:16] 2026-02-04 12:08:12,068 | INFO     | current chi2=0.9721674708505813 (change=69.56020040436617 %)
[2026-02-04 13:09:16] 2026-02-04 12:08:12,068 | INFO     | sum of square deviations: 4449281562.0
[2026-02-04 13:09:16] 2026-02-04 12:08:12,070 | INFO     | sum of deviations: -32378060680.000057
[2026-02-04 13:09:16] 2026-02-04 12:08:12,070 | INFO     | mean x: 1770199478.0
[2026-02-04 13:09:16] 2026-02-04 12:08:12,071 | INFO     | mean y: 2501997.9053497943
[2026-02-04 13:09:16] 2026-02-04 12:08:12,071 | INFO     | intersect: 12884497734.90349
[2026-02-04 13:09:16] 2026-02-04 12:08:12,071 | INFO     | chi2: 0.8993652277725015
[2026-02-04 13:09:16] 2026-02-04 12:08:12,071 | INFO     | current chi2=0.8993652277725015 (change=7.488652445281134 %)
[2026-02-04 13:09:16] 2026-02-04 12:08:12,071 | INFO     | left removable region: 30
[2026-02-04 13:09:16] 2026-02-04 12:08:12,072 | INFO     | sum of square deviations: 3392567795.5
[2026-02-04 13:09:16] 2026-02-04 12:08:12,074 | INFO     | sum of deviations: 5670312584.0
[2026-02-04 13:09:16] 2026-02-04 12:08:12,074 | INFO     | mean x: 1770199752.5
[2026-02-04 13:09:16] 2026-02-04 12:08:12,074 | INFO     | mean y: 2497841.5225225226
[2026-02-04 13:09:16] 2026-02-04 12:08:12,074 | INFO     | intersect: -2956200860.418992
[2026-02-04 13:09:16] 2026-02-04 12:08:12,074 | INFO     | chi2: 0.0003771779569299939
[2026-02-04 13:09:16] 2026-02-04 12:08:12,075 | INFO     | current memory leak: 1.67 B/s (using 222 data points, chi2=0.00)
[2026-02-04 13:09:16] 2026-02-04 12:08:12,075 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-02-04 13:09:16] 2026-02-04 12:08:12,076 | INFO     | ..............................
[2026-02-04 13:09:16] 2026-02-04 12:08:12,076 | INFO     | . Timing measurements:
[2026-02-04 13:09:16] 2026-02-04 12:08:12,076 | INFO     | . get job = 0 s
[2026-02-04 13:09:16] 2026-02-04 12:08:12,076 | INFO     | . initial setup = 122 s
[2026-02-04 13:09:16] 2026-02-04 12:08:12,076 | INFO     | . payload setup = 139 s
[2026-02-04 13:09:16] 2026-02-04 12:08:12,076 | INFO     | . stage-in = 0 s
[2026-02-04 13:09:16] 2026-02-04 12:08:12,076 | INFO     | . payload execution = 15830 s
[2026-02-04 13:09:16] 2026-02-04 12:08:12,076 | INFO     | . stage-out = 4 s
[2026-02-04 13:09:16] 2026-02-04 12:08:12,076 | INFO     | . log creation = 1 s
[2026-02-04 13:09:16] 2026-02-04 12:08:12,077 | INFO     | ..............................
[2026-02-04 13:09:16] 2026-02-04 12:08:12,198 | INFO     | 
[2026-02-04 13:09:16] 2026-02-04 12:08:12,198 | INFO     | job summary report
[2026-02-04 13:09:16] 2026-02-04 12:08:12,198 | INFO     | --------------------------------------------------
[2026-02-04 13:09:16] 2026-02-04 12:08:12,198 | INFO     | PanDA job id: 6994197878
[2026-02-04 13:09:16] 2026-02-04 12:08:12,199 | INFO     | task id: 48318042
[2026-02-04 13:09:16] 2026-02-04 12:08:12,199 | INFO     | errors: (none)
[2026-02-04 13:09:16] 2026-02-04 12:08:12,199 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 13:09:16] 2026-02-04 12:08:12,199 | INFO     | pilot state: finished 
[2026-02-04 13:09:16] 2026-02-04 12:08:12,199 | INFO     | transexitcode: 0
[2026-02-04 13:09:16] 2026-02-04 12:08:12,199 | INFO     | exeerrorcode: 0
[2026-02-04 13:09:16] 2026-02-04 12:08:12,199 | INFO     | exeerrordiag: 
[2026-02-04 13:09:16] 2026-02-04 12:08:12,199 | INFO     | exitcode: 0
[2026-02-04 13:09:16] 2026-02-04 12:08:12,199 | INFO     | exitmsg: OK
[2026-02-04 13:09:16] 2026-02-04 12:08:12,199 | INFO     | cpuconsumptiontime: 59495 s
[2026-02-04 13:09:16] 2026-02-04 12:08:12,200 | INFO     | nevents: 400
[2026-02-04 13:09:16] 2026-02-04 12:08:12,200 | INFO     | neventsw: 0
[2026-02-04 13:09:16] 2026-02-04 12:08:12,200 | INFO     | pid: 4238
[2026-02-04 13:09:16] 2026-02-04 12:08:12,200 | INFO     | pgrp: 4238
[2026-02-04 13:09:16] 2026-02-04 12:08:12,200 | INFO     | corecount: 8
[2026-02-04 13:09:16] 2026-02-04 12:08:12,200 | INFO     | event service: False
[2026-02-04 13:09:16] 2026-02-04 12:08:12,200 | INFO     | sizes: {0: 2277851, 1: 2278312, 12: 2278312, 15974: 2309609, 15978: 2318663, 15982: 2318801}
[2026-02-04 13:09:16] 2026-02-04 12:08:12,200 | INFO     | --------------------------------------------------
[2026-02-04 13:09:16] 2026-02-04 12:08:12,201 | INFO     | 
[2026-02-04 13:09:16] 2026-02-04 12:08:12,201 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-02-04 13:09:16] 2026-02-04 12:08:12,715 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 13:09:16] 2026-02-04 12:08:12,715 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 13:09:16] 2026-02-04 12:08:12,715 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 13:09:16] 2026-02-04 12:08:12,715 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 13:09:16] 2026-02-04 12:08:12,715 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 13:09:16] 2026-02-04 12:08:12,716 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 13:09:16] 2026-02-04 12:08:12,716 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 13:09:16] 2026-02-04 12:08:12,716 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 13:09:16] 2026-02-04 12:08:12,716 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 13:09:16] 2026-02-04 12:08:12,716 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 13:09:16] 2026-02-04 12:08:12,716 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 13:09:16] 2026-02-04 12:08:12,716 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 13:09:16] 2026-02-04 12:08:12,716 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 13:09:16] 2026-02-04 12:08:12,717 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 13:09:16] 2026-02-04 12:08:12,717 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 13:09:16] 2026-02-04 12:08:12,717 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 13:09:16] 2026-02-04 12:08:12,717 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 13:09:16] 2026-02-04 12:08:12,717 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 13:09:16] 2026-02-04 12:08:12,717 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 13:09:16] 2026-02-04 12:08:12,717 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 13:09:16] 2026-02-04 12:08:12,717 | INFO     | job 6994197878 has completed (purged errors)
[2026-02-04 13:09:16] 2026-02-04 12:08:12,718 | INFO     | overall cleanup function is called
[2026-02-04 13:09:16] 2026-02-04 12:08:13,727 | INFO     | --- collectZombieJob: --- 10, [4238]
[2026-02-04 13:09:16] 2026-02-04 12:08:13,727 | INFO     | zombie collector waiting for pid 4238
[2026-02-04 13:09:16] 2026-02-04 12:08:13,727 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 13:09:16] 2026-02-04 12:08:13,727 | INFO     | collected zombie processes
[2026-02-04 13:09:16] 2026-02-04 12:08:13,728 | INFO     | will attempt to kill all subprocesses of pid=4238
[2026-02-04 13:09:16] 2026-02-04 12:08:13,818 | INFO     | process IDs to be killed: [4238] (in reverse order)
[2026-02-04 13:09:16] 2026-02-04 12:08:14,891 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 13:09:16] 2026-02-04 12:08:14,892 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 13:09:16] 2026-02-04 12:08:14,894 | INFO     | did not find any defunct processes belonging to 4238
[2026-02-04 13:09:16] 2026-02-04 12:08:14,896 | INFO     | did not find any defunct processes belonging to 4238
[2026-02-04 13:09:16] 2026-02-04 12:08:14,896 | INFO     | ready for new job
[2026-02-04 13:09:16] 2026-02-04 12:08:14,896 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 13:09:16] 2026-02-04 12:08:14,898 | INFO     | **************************************
[2026-02-04 13:09:16] 2026-02-04 12:08:14,898 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 13:09:16] 2026-02-04 12:08:14,898 | INFO     | **************************************
[2026-02-04 13:09:16] 2026-02-04 12:08:14,899 | INFO     | 
[2026-02-04 13:09:16] 2026-02-04 12:08:14,899 | INFO     | pilot is running in a VM
[2026-02-04 13:09:16] 2026-02-04 12:08:14,899 | INFO     | architecture information:
[2026-02-04 13:09:16] 2026-02-04 12:08:14,903 | INFO     | executing command: cat /etc/os-release
[2026-02-04 13:09:16] 2026-02-04 12:08:15,150 | INFO     | cat /etc/os-release:
[2026-02-04 13:09:16] NAME="CentOS Linux"
[2026-02-04 13:09:16] VERSION="7 (Core)"
[2026-02-04 13:09:16] ID="centos"
[2026-02-04 13:09:16] ID_LIKE="rhel fedora"
[2026-02-04 13:09:16] VERSION_ID="7"
[2026-02-04 13:09:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 13:09:16] ANSI_COLOR="0;31"
[2026-02-04 13:09:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 13:09:16] HOME_URL="https://www.centos.org/"
[2026-02-04 13:09:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 13:09:16] 
[2026-02-04 13:09:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 13:09:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 13:09:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 13:09:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 13:09:16] 
[2026-02-04 13:09:16] 2026-02-04 12:08:15,151 | INFO     | **************************************
[2026-02-04 13:09:16] 2026-02-04 12:08:15,654 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-02-04 13:09:16] 2026-02-04 12:08:15,786 | INFO     | sufficient remaining disk space (495711158272 B)
[2026-02-04 13:09:16] 2026-02-04 12:08:15,787 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 13:09:16] 2026-02-04 12:08:15,787 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 13:09:16] 2026-02-04 12:08:15,787 | INFO     | update_server=False
[2026-02-04 13:09:16] 2026-02-04 12:08:15,787 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 13:09:16] 2026-02-04 12:08:15,790 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 13:09:16] 2026-02-04 12:08:15,892 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-04 13:09:16] 2026-02-04 12:08:15,892 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-04 13:09:16] 2026-02-04 12:08:15,892 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 13:09:16] 2026-02-04 12:08:15,892 | INFO     | will abort loop
[2026-02-04 13:09:16] 2026-02-04 12:08:16,285 | INFO     | all data control threads have been joined
[2026-02-04 13:09:16] 2026-02-04 12:08:16,554 | INFO     | all job control threads have been joined
[2026-02-04 13:09:16] 2026-02-04 12:08:16,672 | INFO     | all payload control threads have been joined
[2026-02-04 13:09:16] 2026-02-04 12:08:16,793 | INFO     | [job] retrieve thread has finished
[2026-02-04 13:09:16] 2026-02-04 12:08:16,838 | INFO     | [payload] validate_post thread has finished
[2026-02-04 13:09:16] 2026-02-04 12:08:16,852 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 13:09:16] 2026-02-04 12:08:16,898 | INFO     | [job] job monitor thread has finished
[2026-02-04 13:09:16] 2026-02-04 12:08:17,060 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 13:09:16] 2026-02-04 12:08:17,212 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 13:09:16] 2026-02-04 12:08:17,255 | INFO     | [payload] failed_post thread has finished
[2026-02-04 13:09:16] 2026-02-04 12:08:17,291 | INFO     | [data] control thread has finished
[2026-02-04 13:09:16] 2026-02-04 12:08:17,303 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 13:09:16] 2026-02-04 12:08:17,560 | INFO     | [job] control thread has finished
[2026-02-04 13:09:16] 2026-02-04 12:08:17,656 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 13:09:16] 2026-02-04 12:08:17,678 | INFO     | [payload] control thread has finished
[2026-02-04 13:09:16] 2026-02-04 12:08:18,179 | INFO     | [data] copytool_in thread has finished
[2026-02-04 13:09:16] 2026-02-04 12:08:18,180 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 13:09:16] 2026-02-04 12:08:18,218 | INFO     | [job] queue monitor thread has finished
[2026-02-04 13:09:16] 2026-02-04 12:08:18,220 | INFO     | [job] validate thread has finished
[2026-02-04 13:09:16] 2026-02-04 12:08:18,859 | INFO     | [data] copytool_out thread has finished
[2026-02-04 13:09:16] 2026-02-04 12:08:19,800 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 13:09:16] 2026-02-04 12:08:44,030 | INFO     | PID=32200 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-04 13:09:16] 2026-02-04 12:08:44,034 | INFO     | .. there are 2 such processes running
[2026-02-04 13:09:16] 2026-02-04 12:08:44,034 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 13:09:16] 2026-02-04 12:08:44,034 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 13:09:16] 2026-02-04 12:08:44,035 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 13:09:16] 2026-02-04 12:09:04,965 | INFO     | [monitor] cgroup control has ended
[2026-02-04 13:09:16] 2026-02-04 12:09:05,934 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140005054207808)>', '<ExcThread(monitor, started 140004324013824)>']
[2026-02-04 13:09:16] 2026-02-04 12:09:06,166 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 13:09:16] 2026-02-04 12:09:06,166 | INFO     | [monitor] control thread has ended
[2026-02-04 13:09:16] 2026-02-04 12:09:10,960 | INFO     | all workflow threads have been joined
[2026-02-04 13:09:16] 2026-02-04 12:09:10,960 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 13:09:16] 2026-02-04 12:09:10,960 | INFO     | traces error code: 0
[2026-02-04 13:09:16] 2026-02-04 12:09:10,961 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 13:09:16] 2026-02-04 12:09:11,379 [wrapper] ==== pilot stdout END ====
[2026-02-04 13:09:16] 2026-02-04 12:09:11,488 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 13:09:16] 2026-02-04 12:09:11,565 [wrapper] pilotpid: 32200
[2026-02-04 13:09:16] 2026-02-04 12:09:11,621 [wrapper] Pilot exit status: 0
[2026-02-04 13:09:16] 2026-02-04 12:09:12,171 [wrapper] pandaids: 6994197878
[2026-02-04 13:09:16] 2026-02-04 12:09:13,345 [wrapper] cleanup supervisor_pilot 10539 32201
[2026-02-04 13:09:16] 2026-02-04 12:09:13,403 [wrapper] Test setup, not cleaning
[2026-02-04 13:09:16] 2026-02-04 12:09:13,513 [wrapper] apfmon messages muted
[2026-02-04 13:09:16] 2026-02-04 12:09:13,633 [wrapper] ==== wrapper stdout END ====
[2026-02-04 13:09:16] 2026-02-04 12:09:13,743 [wrapper] ==== wrapper stderr END ====
[2026-02-04 13:09:16]  *** Error codes and diagnostics ***
[2026-02-04 13:09:16]     "exeErrorCode": 0,
[2026-02-04 13:09:16]     "exeErrorDiag": "",
[2026-02-04 13:09:16]     "pilotErrorCode": 0,
[2026-02-04 13:09:16]     "pilotErrorDiag": "",
[2026-02-04 13:09:16]  *** Listing of results directory ***
[2026-02-04 13:09:16] total 675320
[2026-02-04 13:09:16] -rwx------. 1 boinc boinc     36322 Feb  3 16:14 runpilot2-wrapper.sh
[2026-02-04 13:09:16] -rw-r--r--. 1 boinc boinc    584422 Feb  3 16:18 pilot3.tar.gz
[2026-02-04 13:09:16] -rw-r--r--. 1 boinc boinc      5111 Feb  3 16:18 queuedata.json
[2026-02-04 13:09:16] -rw-r--r--. 1 boinc boinc       100 Feb  4 08:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 13:09:16] -rwxr-xr-x. 1 boinc boinc      7986 Feb  4 08:35 run_atlas
[2026-02-04 13:09:16] -rw-r--r--. 1 boinc boinc       105 Feb  4 08:35 job.xml
[2026-02-04 13:09:16] -rw-r--r--. 1 boinc boinc      6390 Feb  4 08:35 init_data.xml
[2026-02-04 13:09:16] -rw-r--r--. 2 boinc boinc 499789065 Feb  4 08:35 EVNT.48318040._000157.pool.root.1
[2026-02-04 13:09:16] -rw-r--r--. 2 boinc boinc     15845 Feb  4 08:35 start_atlas.sh
[2026-02-04 13:09:16] drwxrwx--x. 2 boinc boinc        68 Feb  4 08:35 shared
[2026-02-04 13:09:16] -rw-r--r--. 2 boinc boinc    597772 Feb  4 08:35 input.tar.gz
[2026-02-04 13:09:16] -rw-r--r--. 1 boinc boinc         0 Feb  4 08:35 boinc_lockfile
[2026-02-04 13:09:16] -rw-r--r--. 1 boinc boinc      2535 Feb  4 08:35 pandaJob.out
[2026-02-04 13:09:16] -rw-------. 1 boinc boinc       415 Feb  4 08:41 workernode_map.json
[2026-02-04 13:09:16] -rw-------. 1 boinc boinc   1009236 Feb  4 08:41 agis_schedconf.cvmfs.json
[2026-02-04 13:09:16] drwx------. 5 boinc boinc      4096 Feb  4 08:41 pilot3
[2026-02-04 13:09:16] -rw-------. 1 boinc boinc 182342853 Feb  4 13:06 HITS.48318042._008080.pool.root.1
[2026-02-04 13:09:16] -rw-r--r--. 1 boinc boinc       532 Feb  4 13:07 boinc_task_state.xml
[2026-02-04 13:09:16] -rw-------. 1 boinc boinc      1011 Feb  4 13:08 memory_monitor_summary.json
[2026-02-04 13:09:16] -rw-------. 1 boinc boinc        95 Feb  4 13:08 pilot_heartbeat.json
[2026-02-04 13:09:16] -rw-------. 1 boinc boinc   1511668 Feb  4 13:08 agis_ddmendpoints.agis.ALL.json
[2026-02-04 13:09:16] -rw-------. 1 boinc boinc    489191 Feb  4 13:08 log.48318042._008080.job.log.tgz.1
[2026-02-04 13:09:16] -rw-------. 1 boinc boinc      6315 Feb  4 13:08 heartbeat.json
[2026-02-04 13:09:16] -rw-------. 1 boinc boinc      5066 Feb  4 13:09 pilotlog.txt
[2026-02-04 13:09:16] -rw-r--r--. 1 boinc boinc        28 Feb  4 13:09 wrapper_checkpoint.txt
[2026-02-04 13:09:16] -rw-------. 1 boinc boinc   2242773 Feb  4 13:09 log.48318042._008080.job.log.1
[2026-02-04 13:09:16] -rw-r--r--. 1 boinc boinc      8192 Feb  4 13:09 boinc_mmap_file
[2026-02-04 13:09:16] -rw-------. 1 boinc boinc       357 Feb  4 13:09 output.list
[2026-02-04 13:09:16] -rw-r--r--. 1 boinc boinc       620 Feb  4 13:09 runtime_log
[2026-02-04 13:09:16] -rw-------. 1 boinc boinc   2754560 Feb  4 13:09 result.tar.gz
[2026-02-04 13:09:16] -rw-r--r--. 1 boinc boinc      8816 Feb  4 13:09 runtime_log.err
[2026-02-04 13:09:16] -rw-------. 1 boinc boinc       655 Feb  4 13:09 LwtMDmEIX78n9Rq4apOajLDm4fhM0noT9bVooX4SDmlzUKDmYZbPOn.diag
[2026-02-04 13:09:16] -rw-r--r--. 1 boinc boinc     20681 Feb  4 13:09 stderr.txt
[2026-02-04 13:09:16] HITS file was successfully produced:
[2026-02-04 13:09:16] -rw-------. 1 boinc boinc 182342853 Feb  4 13:06 shared/HITS.pool.root.1
[2026-02-04 13:09:16]  *** Contents of shared directory: ***
[2026-02-04 13:09:16] total 669440
[2026-02-04 13:09:16] -rw-r--r--. 2 boinc boinc 499789065 Feb  4 08:35 ATLAS.root_0
[2026-02-04 13:09:16] -rw-r--r--. 2 boinc boinc     15845 Feb  4 08:35 start_atlas.sh
[2026-02-04 13:09:16] -rw-r--r--. 2 boinc boinc    597772 Feb  4 08:35 input.tar.gz
[2026-02-04 13:09:16] -rw-------. 1 boinc boinc 182342853 Feb  4 13:06 HITS.pool.root.1
[2026-02-04 13:09:16] -rw-------. 1 boinc boinc   2754560 Feb  4 13:09 result.tar.gz
13:09:17 (28240): run_atlas exited; CPU time 59667.914414
13:09:17 (28240): called boinc_finish(0)

</stderr_txt>
]]>

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