Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:53:03 (1473429): wrapper (7.7.26015): starting
12:53:03 (1473429): wrapper: running run_atlas (--nthreads 12)
[2026-02-03 12:53:03] Arguments: --nthreads 12
[2026-02-03 12:53:03] Threads: 12
[2026-02-03 12:53:03] Checking for CVMFS
[2026-02-03 12:53:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-03 12:53:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-03 12:53:04] Running cvmfs_config stat atlas.cern.ch
[2026-02-03 12:53:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-03 12:53:05] 2.11.5.0 394429 127932 213376 155843 2 444 34230646 45568001 18336 130560 0 743007000 99.778 490441518 20826 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-02-03 12:53:05] CVMFS is ok
[2026-02-03 12:53:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-03 12:53:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-03 12:53:05] Further information can be found at the LHC@home message board.
[2026-02-03 12:53:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 12:53:05] Checking for apptainer binary...
[2026-02-03 12:53:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-03 12:53:05] Running /usr/bin/apptainer --version
[2026-02-03 12:53:05] apptainer version 1.4.1-1.el9
[2026-02-03 12:53:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 12:53:07] wns0074.triumf.lcg
[2026-02-03 12:53:07] apptainer works
[2026-02-03 12:53:07] Set ATHENA_PROC_NUMBER=12
[2026-02-03 12:53:07] Set ATHENA_CORE_NUMBER=12
[2026-02-03 12:53:07] Starting ATLAS job with PandaID=6993749752
[2026-02-03 12:53:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-03 12:58:49]  *** The last 200 lines of the pilot log: ***
[2026-02-03 12:58:49] 2026-02-03 20:58:09,244 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-03 12:58:49] 2026-02-03 20:58:09,263 | WARNING  | wrong length of table data, x=[1770152117.0], y=[1101.0] (must be same and length>=4)
[2026-02-03 12:58:49] 2026-02-03 20:58:09,263 | INFO     | could have reported an average CPU frequency of 1399 MHz (4 samples)
[2026-02-03 12:58:49] 2026-02-03 20:58:09,263 | INFO     | ..............................
[2026-02-03 12:58:49] 2026-02-03 20:58:09,263 | INFO     | . Timing measurements:
[2026-02-03 12:58:49] 2026-02-03 20:58:09,264 | INFO     | . get job = 0 s
[2026-02-03 12:58:49] 2026-02-03 20:58:09,264 | INFO     | . initial setup = 34 s
[2026-02-03 12:58:49] 2026-02-03 20:58:09,264 | INFO     | . payload setup = 28 s
[2026-02-03 12:58:49] 2026-02-03 20:58:09,264 | INFO     | . stage-in = 0 s
[2026-02-03 12:58:49] 2026-02-03 20:58:09,264 | INFO     | . payload execution = 65 s
[2026-02-03 12:58:49] 2026-02-03 20:58:09,264 | INFO     | . stage-out = 1 s
[2026-02-03 12:58:49] 2026-02-03 20:58:09,264 | INFO     | . log creation = 0 s
[2026-02-03 12:58:49] 2026-02-03 20:58:09,264 | INFO     | ..............................
[2026-02-03 12:58:49] 2026-02-03 20:58:09,264 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-03 12:58:49] 2026-02-03 20:58:09,265 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6993749752/pilotlog.txt
[2026-02-03 12:58:49] 2026-02-03 20:58:09,350 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-03 12:58:49] - Log from pilotlog.txt -
[2026-02-03 12:58:49] 2026-02-03 20:58:09,214 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6993749752/memory_monitor_summary.json (trf name=prmon)
[2026-02-03 12:58:49] 2026-02-03 20:58:09,243 | INFO     | extracted standard info from prmon json
[2026-02-03 12:58:49] 2026-02-03 20:58:09,243 | INFO     | extracted standard memory fields from prmon json
[2026-02-03 12:58:49] 2026-02-03 20:58:09,243 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-03 12:58:49] 2026-02-03 20:58:09,244 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-03 12:58:49] 2026-02-03 20:58:09,244 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-03 12:58:49] 2026-02-03 20:58:09,263 | WARNING  | wrong length of table data, x=[1770152117.0], y=[1101.0] (must be same and length>=4)
[2026-02-03 12:58:49] 2026-02-03 20:58:09,263 | INFO     | could have reported an average CPU frequency of 1399 MHz (4 samples)
[2026-02-03 12:58:49] 2026-02-03 20:58:09,263 | INFO     | ..............................
[2026-02-03 12:58:49] 2026-02-03 20:58:09,263 | INFO     | . Timing measurements:
[2026-02-03 12:58:49] 2026-02-03 20:58:09,264 | INFO     | . get job = 0 s
[2026-02-03 12:58:49] 2026-02-03 20:58:09,264 | INFO     | . initial setup = 34 s
[2026-02-03 12:58:49] 2026-02-03 20:58:09,264 | INFO     | . payload setup = 28 s
[2026-02-03 12:58:49] 2026-02-03 20:58:09,264 | INFO     | . stage-in = 0 s
[2026-02-03 12:58:49] 2026-02-03 20:58:09,264 | INFO     | . payload execution = 65 s
[2026-02-03 12:58:49] 2026-02-03 20:58:09,264 | INFO     | . stage-out = 1 s
[2026-02-03 12:58:49] 2026-02-03 20:58:09,264 | INFO     | . log creation = 0 s
[2026-02-03 12:58:49] 2026-02-03 20:58:09,264 | INFO     | ..............................
[2026-02-03 12:58:49] 2026-02-03 20:58:09,264 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-03 12:58:49] 2026-02-03 20:58:09,265 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6993749752/pilotlog.txt
[2026-02-03 12:58:49] 2026-02-03 20:58:09,350 | WARNING  | 
[2026-02-03 12:58:49] [begin log extracts]
[2026-02-03 12:58:49] - Log from pilotlog.txt -
[2026-02-03 12:58:49] 2026-02-03 20:58:09,214 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6993749752/memory_monitor_summary.json (trf name=prmon)
[2026-02-03 12:58:49] 2026-02-03 20:58:09,243 | INFO     | extracted standard info from prmon json
[2026-02-03 12:58:49] 2026-02-03 20:58:09,243 | INFO     | extracted standard memory fields from prmon json
[2026-02-03 12:58:49] 2026-02-03 20:58:09,243 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-03 12:58:49] 2026-02-03 20:58:09,244 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-03 12:58:49] 2026-02-03 20:58:09,244 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-03 12:58:49] 2026-02-03 20:58:09,263 | WARNING  | wrong length of table data, x=[1770152117.0], y=[1101.0] (must be same and length>=4)
[2026-02-03 12:58:49] 2026-02-03 20:58:09,263 | INFO     | could have reported an average CPU frequency of 1399 MHz (4 samples)
[2026-02-03 12:58:49] 2026-02-03 20:58:09,263 | INFO     | ..............................
[2026-02-03 12:58:49] 2026-02-03 20:58:09,263 | INFO     | . Timing measurements:
[2026-02-03 12:58:49] 2026-02-03 20:58:09,264 | INFO     | . get job = 0 s
[2026-02-03 12:58:49] 2026-02-03 20:58:09,264 | INFO     | . initial setup = 34 s
[2026-02-03 12:58:49] 2026-02-03 20:58:09,264 | INFO     | . payload setup = 28 s
[2026-02-03 12:58:49] 2026-02-03 20:58:09,264 | INFO     | . stage-in = 0 s
[2026-02-03 12:58:49] 2026-02-03 20:58:09,264 | INFO     | . payload execution = 65 s
[2026-02-03 12:58:49] 2026-02-03 20:58:09,264 | INFO     | . stage-out = 1 s
[2026-02-03 12:58:49] 2026-02-03 20:58:09,264 | INFO     | . log creation = 0 s
[2026-02-03 12:58:49] 2026-02-03 20:58:09,264 | INFO     | ..............................
[2026-02-03 12:58:49] 2026-02-03 20:58:09,264 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-03 12:58:49] 2026-02-03 20:58:09,265 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6993749752/pilotlog.txt
[2026-02-03 12:58:49] [end log extracts]
[2026-02-03 12:58:49] 2026-02-03 20:58:09,351 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-03 12:58:49] 2026-02-03 20:58:09,352 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-03 12:58:49] 2026-02-03 20:58:10,058 | INFO     | 
[2026-02-03 12:58:49] 2026-02-03 20:58:10,059 | INFO     | job summary report
[2026-02-03 12:58:49] 2026-02-03 20:58:10,059 | INFO     | --------------------------------------------------
[2026-02-03 12:58:49] 2026-02-03 20:58:10,059 | INFO     | PanDA job id: 6993749752
[2026-02-03 12:58:49] 2026-02-03 20:58:10,059 | INFO     | task id: 48318034
[2026-02-03 12:58:49] 2026-02-03 20:58:10,059 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-03 12:55:55,486 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-03 12:58:49] 2026-02-03 20:58:10,059 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-03 12:58:49] 2026-02-03 20:58:10,060 | INFO     | pilot state: failed 
[2026-02-03 12:58:49] 2026-02-03 20:58:10,060 | INFO     | transexitcode: 65
[2026-02-03 12:58:49] 2026-02-03 20:58:10,060 | INFO     | exeerrorcode: 65
[2026-02-03 12:58:49] 2026-02-03 20:58:10,060 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-03 12:58:49] 2026-02-03 20:58:10,060 | INFO     | exitcode: 65
[2026-02-03 12:58:49] 2026-02-03 20:58:10,060 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-03 12:58:49] 2026-02-03 20:58:10,060 | INFO     | cpuconsumptiontime: 22 s
[2026-02-03 12:58:49] 2026-02-03 20:58:10,060 | INFO     | nevents: 0
[2026-02-03 12:58:49] 2026-02-03 20:58:10,060 | INFO     | neventsw: 0
[2026-02-03 12:58:49] 2026-02-03 20:58:10,060 | INFO     | pid: 1482246
[2026-02-03 12:58:49] 2026-02-03 20:58:10,060 | INFO     | pgrp: 1482246
[2026-02-03 12:58:49] 2026-02-03 20:58:10,061 | INFO     | corecount: 12
[2026-02-03 12:58:49] 2026-02-03 20:58:10,061 | INFO     | event service: False
[2026-02-03 12:58:49] 2026-02-03 20:58:10,061 | INFO     | sizes: {0: 2277146, 1: 2277744, 2: 2277828, 4: 2277856, 5: 2277856, 6: 2278501, 98: 2301772, 100: 2306064, 104: 2306092, 222: 2306258}
[2026-02-03 12:58:49] 2026-02-03 20:58:10,061 | INFO     | --------------------------------------------------
[2026-02-03 12:58:49] 2026-02-03 20:58:10,061 | INFO     | 
[2026-02-03 12:58:49] 2026-02-03 20:58:10,061 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-03 12:58:49] 2026-02-03 20:58:10,163 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-03 12:58:49] 2026-02-03 20:58:10,164 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-03 12:58:49] 2026-02-03 20:58:10,164 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-03 12:58:49] 2026-02-03 20:58:10,164 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-03 12:58:49] 2026-02-03 20:58:10,164 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-03 12:58:49] 2026-02-03 20:58:10,164 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-03 12:58:49] 2026-02-03 20:58:10,164 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-03 12:58:49] 2026-02-03 20:58:10,164 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-03 12:58:49] 2026-02-03 20:58:10,164 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-03 12:58:49] 2026-02-03 20:58:10,165 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-03 12:58:49] 2026-02-03 20:58:10,165 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-03 12:58:49] 2026-02-03 20:58:10,165 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-03 12:58:49] 2026-02-03 20:58:10,165 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-03 12:58:49] 2026-02-03 20:58:10,165 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-03 12:58:49] 2026-02-03 20:58:10,165 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-03 12:58:49] 2026-02-03 20:58:10,166 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-03 12:58:49] 2026-02-03 20:58:10,166 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-03 12:58:49] 2026-02-03 20:58:10,166 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-03 12:58:49] 2026-02-03 20:58:10,166 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-03 12:58:49] 2026-02-03 20:58:10,166 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-03 12:58:49] 2026-02-03 20:58:10,166 | INFO     | job 6993749752 has completed (purged errors)
[2026-02-03 12:58:49] 2026-02-03 20:58:10,166 | INFO     | overall cleanup function is called
[2026-02-03 12:58:49] 2026-02-03 20:58:11,123 | INFO     | PID=1477316 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-03 12:58:49] 2026-02-03 20:58:11,140 | INFO     | .. there are 35 such processes running
[2026-02-03 12:58:49] 2026-02-03 20:58:11,175 | INFO     | --- collectZombieJob: --- 10, [1482246]
[2026-02-03 12:58:49] 2026-02-03 20:58:11,175 | INFO     | zombie collector waiting for pid 1482246
[2026-02-03 12:58:49] 2026-02-03 20:58:11,175 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-03 12:58:49] 2026-02-03 20:58:11,175 | INFO     | collected zombie processes
[2026-02-03 12:58:49] 2026-02-03 20:58:11,175 | INFO     | will attempt to kill all subprocesses of pid=1482246
[2026-02-03 12:58:49] 2026-02-03 20:58:12,140 | INFO     | process IDs to be killed: [1482246] (in reverse order)
[2026-02-03 12:58:49] 2026-02-03 20:58:12,700 | WARNING  | found no corresponding commands to process id(s)
[2026-02-03 12:58:49] 2026-02-03 20:58:12,700 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-03 12:58:49] 2026-02-03 20:58:12,714 | INFO     | did not find any defunct processes belonging to 1482246
[2026-02-03 12:58:49] 2026-02-03 20:58:12,726 | INFO     | did not find any defunct processes belonging to 1482246
[2026-02-03 12:58:49] 2026-02-03 20:58:12,726 | INFO     | ready for new job
[2026-02-03 12:58:49] 2026-02-03 20:58:12,726 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-03 12:58:49] 2026-02-03 20:58:12,728 | INFO     | **************************************
[2026-02-03 12:58:49] 2026-02-03 20:58:12,729 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-03 12:58:49] 2026-02-03 20:58:12,729 | INFO     | **************************************
[2026-02-03 12:58:49] 2026-02-03 20:58:12,729 | INFO     | 
[2026-02-03 12:58:49] 2026-02-03 20:58:12,732 | INFO     | architecture information:
[2026-02-03 12:58:49] 2026-02-03 20:58:12,733 | INFO     | executing command: cat /etc/os-release
[2026-02-03 12:58:49] 2026-02-03 20:58:12,749 | INFO     | cat /etc/os-release:
[2026-02-03 12:58:49] NAME="CentOS Linux"
[2026-02-03 12:58:49] VERSION="7 (Core)"
[2026-02-03 12:58:49] ID="centos"
[2026-02-03 12:58:49] ID_LIKE="rhel fedora"
[2026-02-03 12:58:49] VERSION_ID="7"
[2026-02-03 12:58:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-03 12:58:49] ANSI_COLOR="0;31"
[2026-02-03 12:58:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-03 12:58:49] HOME_URL="https://www.centos.org/"
[2026-02-03 12:58:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-03 12:58:49] 
[2026-02-03 12:58:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-03 12:58:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-03 12:58:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-03 12:58:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-03 12:58:49] 
[2026-02-03 12:58:49] 2026-02-03 20:58:12,749 | INFO     | **************************************
[2026-02-03 12:58:49] 2026-02-03 20:58:13,254 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-03 12:58:49] 2026-02-03 20:58:13,465 | INFO     | sufficient remaining disk space (2063531507712 B)
[2026-02-03 12:58:49] 2026-02-03 20:58:13,466 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-03 12:58:49] 2026-02-03 20:58:13,466 | INFO     | current server update state: UPDATING_FINAL
[2026-02-03 12:58:49] 2026-02-03 20:58:13,466 | INFO     | update_server=False
[2026-02-03 12:58:49] 2026-02-03 20:58:13,466 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-03 12:58:49] 2026-02-03 20:58:13,479 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-03 12:58:49] 2026-02-03 20:58:13,479 | INFO     | aborting loop
[2026-02-03 12:58:49] 2026-02-03 20:58:14,422 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-03 12:58:49] 2026-02-03 20:58:14,472 | INFO     | [job] retrieve thread has finished
[2026-02-03 12:58:49] 2026-02-03 20:58:14,485 | INFO     | [job] job monitor thread has finished
[2026-02-03 12:58:49] 2026-02-03 20:58:14,487 | INFO     | [payload] failed_post thread has finished
[2026-02-03 12:58:49] 2026-02-03 20:58:14,581 | INFO     | all data control threads have been joined
[2026-02-03 12:58:49] 2026-02-03 20:58:14,707 | INFO     | all payload control threads have been joined
[2026-02-03 12:58:49] 2026-02-03 20:58:14,976 | INFO     | [payload] validate_post thread has finished
[2026-02-03 12:58:49] 2026-02-03 20:58:14,978 | INFO     | all job control threads have been joined
[2026-02-03 12:58:49] 2026-02-03 20:58:15,047 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-03 12:58:49] 2026-02-03 20:58:15,143 | INFO     | [payload] validate_pre thread has finished
[2026-02-03 12:58:49] 2026-02-03 20:58:15,267 | INFO     | [payload] execute_payloads thread has finished
[2026-02-03 12:58:49] 2026-02-03 20:58:15,427 | INFO     | [job] create_data_payload thread has finished
[2026-02-03 12:58:49] 2026-02-03 20:58:15,533 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-03 12:58:49] 2026-02-03 20:58:15,545 | INFO     | [data] copytool_in thread has finished
[2026-02-03 12:58:49] 2026-02-03 20:58:15,587 | INFO     | [data] control thread has finished
[2026-02-03 12:58:49] 2026-02-03 20:58:15,713 | INFO     | [payload] control thread has finished
[2026-02-03 12:58:49] 2026-02-03 20:58:15,751 | INFO     | [job] validate thread has finished
[2026-02-03 12:58:49] 2026-02-03 20:58:15,805 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-03 12:58:49] 2026-02-03 20:58:15,985 | INFO     | [job] control thread has finished
[2026-02-03 12:58:49] 2026-02-03 20:58:16,054 | INFO     | [job] queue monitor thread has finished
[2026-02-03 12:58:49] 2026-02-03 20:58:16,429 | INFO     | [data] copytool_out thread has finished
[2026-02-03 12:58:49] 2026-02-03 20:58:19,543 | INFO     | [data] queue_monitor thread has finished
[2026-02-03 12:58:49] 2026-02-03 20:58:20,061 | INFO     | [monitor] cgroup control has ended
[2026-02-03 12:58:49] 2026-02-03 20:58:21,320 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140394313647936)>', '<ExcThread(monitor, started 140393530246912)>']
[2026-02-03 12:58:49] 2026-02-03 20:58:26,345 | INFO     | all workflow threads have been joined
[2026-02-03 12:58:49] 2026-02-03 20:58:26,346 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-03 12:58:49] 2026-02-03 20:58:26,347 | INFO     | traces error code: 0
[2026-02-03 12:58:49] 2026-02-03 20:58:26,347 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-03 12:58:49] 2026-02-03 20:58:46,747 | INFO     | PID=1477316 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-03 12:58:49] 2026-02-03 20:58:46,747 | INFO     | .. there are 35 such processes running
[2026-02-03 12:58:49] 2026-02-03 20:58:46,748 | INFO     | found 0 job(s) in 20 queues
[2026-02-03 12:58:49] 2026-02-03 20:58:46,748 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-03 12:58:49] 2026-02-03 20:58:46,748 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-03 12:58:49] 2026-02-03 20:58:46,748 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-03 12:58:49] 2026-02-03 20:58:46,748 | INFO     | [monitor] control thread has ended
[2026-02-03 12:58:49] 2026-02-03 20:58:48,595 [wrapper] ==== pilot stdout END ====
[2026-02-03 12:58:49] 2026-02-03 20:58:48,637 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-03 12:58:49] 2026-02-03 20:58:48,672 [wrapper] pilotpid: 1477316
[2026-02-03 12:58:49] 2026-02-03 20:58:48,693 [wrapper] Pilot exit status: 0
[2026-02-03 12:58:49] 2026-02-03 20:58:48,718 [wrapper] pandaids: 6993749752
[2026-02-03 12:58:49] 2026-02-03 20:58:48,797 [wrapper] cleanup supervisor_pilot 1477323 1477317
[2026-02-03 12:58:49] 2026-02-03 20:58:48,815 [wrapper] Test setup, not cleaning
[2026-02-03 12:58:49] 2026-02-03 20:58:48,868 [wrapper] apfmon messages muted
[2026-02-03 12:58:49] 2026-02-03 20:58:48,884 [wrapper] ==== wrapper stdout END ====
[2026-02-03 12:58:49] 2026-02-03 20:58:48,887 [wrapper] ==== wrapper stderr END ====
[2026-02-03 12:58:49]  *** Error codes and diagnostics ***
[2026-02-03 12:58:49]     "exeErrorCode": 65,
[2026-02-03 12:58:49]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-03 12:58:49]     "pilotErrorCode": 1305,
[2026-02-03 12:58:49]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-03 12:58:49]  *** Listing of results directory ***
[2026-02-03 12:58:49] total 490156
[2026-02-03 12:58:49] -rw-r--r--. 1 boinc boinc      5111 Feb  3 01:31 queuedata.json
[2026-02-03 12:58:49] -rw-r--r--. 1 boinc boinc    584422 Feb  3 01:31 pilot3.tar.gz
[2026-02-03 12:58:49] -rwx------. 1 boinc boinc     36322 Feb  3 01:31 runpilot2-wrapper.sh
[2026-02-03 12:58:49] -rw-r--r--. 1 boinc boinc       100 Feb  3 12:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-03 12:58:49] -rwxr-xr-x. 1 boinc boinc      7986 Feb  3 12:53 run_atlas
[2026-02-03 12:58:49] -rw-r--r--. 1 boinc boinc       105 Feb  3 12:53 job.xml
[2026-02-03 12:58:49] -rw-r--r--. 1 boinc boinc      6593 Feb  3 12:53 init_data.xml
[2026-02-03 12:58:49] -rw-r--r--. 2 boinc boinc 497760006 Feb  3 12:53 EVNT.48318032._000163.pool.root.1
[2026-02-03 12:58:49] -rw-r--r--. 2 boinc boinc     15845 Feb  3 12:53 start_atlas.sh
[2026-02-03 12:58:49] drwxrwx--x. 2 boinc boinc      4096 Feb  3 12:53 shared
[2026-02-03 12:58:49] -rw-r--r--. 2 boinc boinc    597760 Feb  3 12:53 input.tar.gz
[2026-02-03 12:58:49] -rw-r--r--. 1 boinc boinc         0 Feb  3 12:53 boinc_lockfile
[2026-02-03 12:58:49] -rw-r--r--. 1 boinc boinc      2536 Feb  3 12:53 pandaJob.out
[2026-02-03 12:58:49] -rw-------. 1 boinc boinc   1009252 Feb  3 12:53 agis_schedconf.cvmfs.json
[2026-02-03 12:58:49] -rw-------. 1 boinc boinc   1511668 Feb  3 12:53 agis_ddmendpoints.agis.ALL.json
[2026-02-03 12:58:49] -rw-------. 1 boinc boinc       445 Feb  3 12:54 workernode_map.json
[2026-02-03 12:58:49] drwx------. 5 boinc boinc      4096 Feb  3 12:54 pilot3
[2026-02-03 12:58:49] -rw-r--r--. 1 boinc boinc       526 Feb  3 12:55 boinc_task_state.xml
[2026-02-03 12:58:49] -rw-------. 1 boinc boinc       978 Feb  3 12:56 memory_monitor_summary.json
[2026-02-03 12:58:49] -rw-------. 1 boinc boinc     22544 Feb  3 12:56 log.48318034._007723.job.log.tgz.1
[2026-02-03 12:58:49] -rw-------. 1 boinc boinc        95 Feb  3 12:57 pilot_heartbeat.json
[2026-02-03 12:58:49] -rw-------. 1 boinc boinc      7025 Feb  3 12:58 heartbeat.json
[2026-02-03 12:58:49] -rw-------. 1 boinc boinc       823 Feb  3 12:58 pilotlog.txt
[2026-02-03 12:58:49] -rw-r--r--. 1 boinc boinc      8192 Feb  3 12:58 boinc_mmap_file
[2026-02-03 12:58:49] -rw-r--r--. 1 boinc boinc        23 Feb  3 12:58 wrapper_checkpoint.txt
[2026-02-03 12:58:49] -rw-------. 1 boinc boinc     88722 Feb  3 12:58 log.48318034._007723.job.log.1
[2026-02-03 12:58:49] -rw-------. 1 boinc boinc       188 Feb  3 12:58 output.list
[2026-02-03 12:58:49] -rw-r--r--. 1 boinc boinc       620 Feb  3 12:58 runtime_log
[2026-02-03 12:58:49] -rw-------. 1 boinc boinc    133120 Feb  3 12:58 result.tar.gz
[2026-02-03 12:58:49] -rw-------. 1 boinc boinc       643 Feb  3 12:58 ZIUKDm5vR78n9Rq4apOajLDm4fhM0noT9bVooX4SDmKGUKDmgd4fZm.diag
[2026-02-03 12:58:49] -rw-r--r--. 1 boinc boinc      8635 Feb  3 12:58 runtime_log.err
[2026-02-03 12:58:49] -rw-r--r--. 1 boinc boinc     21937 Feb  3 12:58 stderr.txt
[2026-02-03 12:58:49] No HITS result produced
[2026-02-03 12:58:49]  *** Contents of shared directory: ***
[2026-02-03 12:58:49] total 486832
[2026-02-03 12:58:49] -rw-r--r--. 2 boinc boinc 497760006 Feb  3 12:53 ATLAS.root_0
[2026-02-03 12:58:49] -rw-r--r--. 2 boinc boinc     15845 Feb  3 12:53 start_atlas.sh
[2026-02-03 12:58:49] -rw-r--r--. 2 boinc boinc    597760 Feb  3 12:53 input.tar.gz
[2026-02-03 12:58:49] -rw-------. 1 boinc boinc    133120 Feb  3 12:58 result.tar.gz
12:58:51 (1473429): run_atlas exited; CPU time 32.578228
12:58:51 (1473429): called boinc_finish(0)

</stderr_txt>
]]>

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