Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:54:20 (2178407): wrapper (7.7.26015): starting
16:54:20 (2178407): wrapper: running run_atlas (--nthreads 9)
[2026-02-03 16:54:20] Arguments: --nthreads 9
[2026-02-03 16:54:20] Threads: 9
[2026-02-03 16:54:20] Checking for CVMFS
[2026-02-03 16:54:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-03 16:54:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-03 16:54:21] Running cvmfs_config stat atlas.cern.ch
[2026-02-03 16:54:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-03 16:54:42] 2.13.3.0 4474 4692 197248 155844 0 537 35483391 39288833 19934 16776704 0 17377277 99.588 17811780 30872 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-03 16:54:42] CVMFS is ok
[2026-02-03 16:54:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-03 16:54:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-03 16:54:42] Further information can be found at the LHC@home message board.
[2026-02-03 16:54:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 16:54:42] Checking for apptainer binary...
[2026-02-03 16:54:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-03 16:54:42] Running /usr/bin/apptainer --version
[2026-02-03 16:54:43] apptainer version 1.4.5-2.el9
[2026-02-03 16:54:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 16:54:43] c-211-29.aglt2.org
[2026-02-03 16:54:43] apptainer works
[2026-02-03 16:54:44] Set ATHENA_PROC_NUMBER=9
[2026-02-03 16:54:44] Set ATHENA_CORE_NUMBER=9
[2026-02-03 16:54:44] Starting ATLAS job with PandaID=6994938058
[2026-02-03 16:54:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 00:52:22]  *** The last 200 lines of the pilot log: ***
[2026-02-04 00:52:22] 2026-02-04 05:51:31,691 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-02-04 00:52:22] 2026-02-04 05:51:31,691 | INFO     | this job has now completed (state=finished)
[2026-02-04 00:52:22] 2026-02-04 05:51:31,692 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-04 00:52:22] 2026-02-04 05:51:31,692 | INFO     | log transfer has been attempted: DONE
[2026-02-04 00:52:22] 2026-02-04 05:51:31,692 | INFO     | job 6994938058 has finished - writing final server update
[2026-02-04 00:52:22] 2026-02-04 05:51:31,692 | INFO     | total number of processed events: 400 (read)
[2026-02-04 00:52:22] 2026-02-04 05:51:31,707 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6994938058/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 00:52:22] 2026-02-04 05:51:31,708 | INFO     | extracted standard info from prmon json
[2026-02-04 00:52:22] 2026-02-04 05:51:31,708 | INFO     | extracted standard memory fields from prmon json
[2026-02-04 00:52:22] 2026-02-04 05:51:31,708 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-04 00:52:22] 2026-02-04 05:51:31,708 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-04 00:52:22] 2026-02-04 05:51:31,709 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-04 00:52:22] 2026-02-04 05:51:31,723 | INFO     | fitting pss+swap vs Time
[2026-02-04 00:52:22] 2026-02-04 05:51:31,725 | INFO     | sum of square deviations: 31580680504.74939
[2026-02-04 00:52:22] 2026-02-04 05:51:31,734 | INFO     | sum of deviations: 90719029585.37894
[2026-02-04 00:52:22] 2026-02-04 05:51:31,736 | INFO     | mean x: 1770170067.5010707
[2026-02-04 00:52:22] 2026-02-04 05:51:31,736 | INFO     | mean y: 2554759.2419700213
[2026-02-04 00:52:22] 2026-02-04 05:51:31,736 | INFO     | intersect: -5082456334.823314
[2026-02-04 00:52:22] 2026-02-04 05:51:31,737 | INFO     | chi2: 3.056291383384771
[2026-02-04 00:52:22] 2026-02-04 05:51:31,738 | INFO     | sum of square deviations: 30577188870.980537
[2026-02-04 00:52:22] 2026-02-04 05:51:31,759 | INFO     | sum of deviations: 120638628876.9611
[2026-02-04 00:52:22] 2026-02-04 05:51:31,759 | INFO     | mean x: 1770169915.0064936
[2026-02-04 00:52:22] 2026-02-04 05:51:31,759 | INFO     | mean y: 2559265.3463203465
[2026-02-04 00:52:22] 2026-02-04 05:51:31,759 | INFO     | intersect: -6981433682.033545
[2026-02-04 00:52:22] 2026-02-04 05:51:31,760 | INFO     | chi2: 2.33748289327598
[2026-02-04 00:52:22] 2026-02-04 05:51:31,761 | INFO     | current chi2=2.33748289327598 (change=23.51897773937796 %)
[2026-02-04 00:52:22] 2026-02-04 05:51:31,761 | INFO     | right removable region: 461
[2026-02-04 00:52:22] 2026-02-04 05:51:31,761 | INFO     | sum of square deviations: 30577046130.980537
[2026-02-04 00:52:22] 2026-02-04 05:51:31,770 | INFO     | sum of deviations: -16348443739.571424
[2026-02-04 00:52:22] 2026-02-04 05:51:31,770 | INFO     | mean x: 1770170220.0064936
[2026-02-04 00:52:22] 2026-02-04 05:51:31,770 | INFO     | mean y: 2570981.523809524
[2026-02-04 00:52:22] 2026-02-04 05:51:31,770 | INFO     | intersect: 949017153.1806433
[2026-02-04 00:52:22] 2026-02-04 05:51:31,771 | INFO     | chi2: 0.8919329131154796
[2026-02-04 00:52:22] 2026-02-04 05:51:31,774 | INFO     | current chi2=0.8919329131154796 (change=70.81649616380213 %)
[2026-02-04 00:52:22] 2026-02-04 05:51:31,775 | INFO     | sum of square deviations: 29594984706.236374
[2026-02-04 00:52:22] 2026-02-04 05:51:31,785 | INFO     | sum of deviations: -26767796114.100666
[2026-02-04 00:52:22] 2026-02-04 05:51:31,785 | INFO     | mean x: 1770170372.5054705
[2026-02-04 00:52:22] 2026-02-04 05:51:31,785 | INFO     | mean y: 2572590.840262582
[2026-02-04 00:52:22] 2026-02-04 05:51:31,785 | INFO     | intersect: 1603639801.6796455
[2026-02-04 00:52:22] 2026-02-04 05:51:31,786 | INFO     | chi2: 0.8610947726385109
[2026-02-04 00:52:22] 2026-02-04 05:51:31,789 | INFO     | current chi2=0.8610947726385109 (change=3.4574506696083884 %)
[2026-02-04 00:52:22] 2026-02-04 05:51:31,789 | INFO     | left removable region: 20
[2026-02-04 00:52:22] 2026-02-04 05:51:31,790 | INFO     | sum of square deviations: 26594177662.222206
[2026-02-04 00:52:22] 2026-02-04 05:51:31,796 | INFO     | sum of deviations: 28058203292.539692
[2026-02-04 00:52:22] 2026-02-04 05:51:31,796 | INFO     | mean x: 1770170494.5079365
[2026-02-04 00:52:22] 2026-02-04 05:51:31,796 | INFO     | mean y: 2573345.9886621316
[2026-02-04 00:52:22] 2026-02-04 05:51:31,796 | INFO     | intersect: -1865046109.2244139
[2026-02-04 00:52:22] 2026-02-04 05:51:31,797 | INFO     | chi2: 0.04402386439583521
[2026-02-04 00:52:22] 2026-02-04 05:51:31,798 | INFO     | current memory leak: 1.06 B/s (using 441 data points, chi2=0.04)
[2026-02-04 00:52:22] 2026-02-04 05:51:31,798 | INFO     | could have reported an average CPU frequency of 2899 MHz (19 samples)
[2026-02-04 00:52:22] 2026-02-04 05:51:31,799 | INFO     | ..............................
[2026-02-04 00:52:22] 2026-02-04 05:51:31,799 | INFO     | . Timing measurements:
[2026-02-04 00:52:22] 2026-02-04 05:51:31,799 | INFO     | . get job = 0 s
[2026-02-04 00:52:22] 2026-02-04 05:51:31,799 | INFO     | . initial setup = 29 s
[2026-02-04 00:52:22] 2026-02-04 05:51:31,799 | INFO     | . payload setup = 34 s
[2026-02-04 00:52:22] 2026-02-04 05:51:31,800 | INFO     | . stage-in = 0 s
[2026-02-04 00:52:22] 2026-02-04 05:51:31,800 | INFO     | . payload execution = 28455 s
[2026-02-04 00:52:22] 2026-02-04 05:51:31,800 | INFO     | . stage-out = 2 s
[2026-02-04 00:52:22] 2026-02-04 05:51:31,801 | INFO     | . log creation = 0 s
[2026-02-04 00:52:22] 2026-02-04 05:51:31,801 | INFO     | ..............................
[2026-02-04 00:52:22] 2026-02-04 05:51:31,894 | INFO     | number of running child processes to parent process 2193898: 1
[2026-02-04 00:52:22] 2026-02-04 05:51:31,894 | INFO     | maximum number of monitored processes: 6
[2026-02-04 00:52:22] 2026-02-04 05:51:31,894 | INFO     | aborting job monitoring since job object (job id=6994938058) has expired
[2026-02-04 00:52:22] 2026-02-04 05:51:32,038 | INFO     | 
[2026-02-04 00:52:22] 2026-02-04 05:51:32,038 | INFO     | job summary report
[2026-02-04 00:52:22] 2026-02-04 05:51:32,038 | INFO     | --------------------------------------------------
[2026-02-04 00:52:22] 2026-02-04 05:51:32,039 | INFO     | PanDA job id: 6994938058
[2026-02-04 00:52:22] 2026-02-04 05:51:32,039 | INFO     | task id: 48317892
[2026-02-04 00:52:22] 2026-02-04 05:51:32,039 | INFO     | errors: (none)
[2026-02-04 00:52:22] 2026-02-04 05:51:32,039 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 00:52:22] 2026-02-04 05:51:32,039 | INFO     | pilot state: finished 
[2026-02-04 00:52:22] 2026-02-04 05:51:32,039 | INFO     | transexitcode: 0
[2026-02-04 00:52:22] 2026-02-04 05:51:32,039 | INFO     | exeerrorcode: 0
[2026-02-04 00:52:22] 2026-02-04 05:51:32,040 | INFO     | exeerrordiag: 
[2026-02-04 00:52:22] 2026-02-04 05:51:32,040 | INFO     | exitcode: 0
[2026-02-04 00:52:22] 2026-02-04 05:51:32,040 | INFO     | exitmsg: OK
[2026-02-04 00:52:22] 2026-02-04 05:51:32,040 | INFO     | cpuconsumptiontime: 86210 s
[2026-02-04 00:52:22] 2026-02-04 05:51:32,040 | INFO     | nevents: 400
[2026-02-04 00:52:22] 2026-02-04 05:51:32,040 | INFO     | neventsw: 0
[2026-02-04 00:52:22] 2026-02-04 05:51:32,041 | INFO     | pid: 2193898
[2026-02-04 00:52:22] 2026-02-04 05:51:32,041 | INFO     | pgrp: 2193898
[2026-02-04 00:52:22] 2026-02-04 05:51:32,041 | INFO     | corecount: 9
[2026-02-04 00:52:22] 2026-02-04 05:51:32,041 | INFO     | event service: False
[2026-02-04 00:52:22] 2026-02-04 05:51:32,041 | INFO     | sizes: {0: 2277788, 1: 2277816, 2: 2278249, 13: 2278277, 28493: 2315126, 28497: 2324308, 28499: 2324446}
[2026-02-04 00:52:22] 2026-02-04 05:51:32,041 | INFO     | --------------------------------------------------
[2026-02-04 00:52:22] 2026-02-04 05:51:32,042 | INFO     | 
[2026-02-04 00:52:22] 2026-02-04 05:51:32,042 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-04 00:52:22] 2026-02-04 05:51:32,207 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 00:52:22] 2026-02-04 05:51:32,207 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 00:52:22] 2026-02-04 05:51:32,207 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 00:52:22] 2026-02-04 05:51:32,207 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 00:52:22] 2026-02-04 05:51:32,207 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 00:52:22] 2026-02-04 05:51:32,208 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 00:52:22] 2026-02-04 05:51:32,208 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 00:52:22] 2026-02-04 05:51:32,208 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 00:52:22] 2026-02-04 05:51:32,208 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 00:52:22] 2026-02-04 05:51:32,208 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 00:52:22] 2026-02-04 05:51:32,209 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 00:52:22] 2026-02-04 05:51:32,209 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 00:52:22] 2026-02-04 05:51:32,209 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 00:52:22] 2026-02-04 05:51:32,209 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 00:52:22] 2026-02-04 05:51:32,209 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 00:52:22] 2026-02-04 05:51:32,209 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 00:52:22] 2026-02-04 05:51:32,209 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 00:52:22] 2026-02-04 05:51:32,210 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 00:52:22] 2026-02-04 05:51:32,210 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 00:52:22] 2026-02-04 05:51:32,210 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 00:52:22] 2026-02-04 05:51:32,210 | INFO     | job 6994938058 has completed (purged errors)
[2026-02-04 00:52:22] 2026-02-04 05:51:32,210 | INFO     | overall cleanup function is called
[2026-02-04 00:52:22] 2026-02-04 05:51:32,679 | INFO     | PID=2185361 has CPU usage=19.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-04 00:52:22] 2026-02-04 05:51:32,679 | INFO     | .. there are 27 such processes running
[2026-02-04 00:52:22] 2026-02-04 05:51:33,232 | INFO     | --- collectZombieJob: --- 10, [2193898]
[2026-02-04 00:52:22] 2026-02-04 05:51:33,233 | INFO     | zombie collector waiting for pid 2193898
[2026-02-04 00:52:22] 2026-02-04 05:51:33,233 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 00:52:22] 2026-02-04 05:51:33,233 | INFO     | collected zombie processes
[2026-02-04 00:52:22] 2026-02-04 05:51:33,233 | INFO     | will attempt to kill all subprocesses of pid=2193898
[2026-02-04 00:52:22] 2026-02-04 05:51:33,792 | INFO     | process IDs to be killed: [2193898] (in reverse order)
[2026-02-04 00:52:22] 2026-02-04 05:51:33,956 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 00:52:22] 2026-02-04 05:51:33,956 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 00:52:22] 2026-02-04 05:51:33,977 | INFO     | did not find any defunct processes belonging to 2193898
[2026-02-04 00:52:22] 2026-02-04 05:51:33,999 | INFO     | did not find any defunct processes belonging to 2193898
[2026-02-04 00:52:22] 2026-02-04 05:51:34,000 | INFO     | ready for new job
[2026-02-04 00:52:22] 2026-02-04 05:51:34,000 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 00:52:22] 2026-02-04 05:51:34,003 | INFO     | **************************************
[2026-02-04 00:52:22] 2026-02-04 05:51:34,003 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 00:52:22] 2026-02-04 05:51:34,003 | INFO     | **************************************
[2026-02-04 00:52:22] 2026-02-04 05:51:34,004 | INFO     | 
[2026-02-04 00:52:22] 2026-02-04 05:51:34,009 | INFO     | architecture information:
[2026-02-04 00:52:22] 2026-02-04 05:51:34,009 | INFO     | executing command: cat /etc/os-release
[2026-02-04 00:52:22] 2026-02-04 05:51:34,055 | INFO     | cat /etc/os-release:
[2026-02-04 00:52:22] NAME="CentOS Linux"
[2026-02-04 00:52:22] VERSION="7 (Core)"
[2026-02-04 00:52:22] ID="centos"
[2026-02-04 00:52:22] ID_LIKE="rhel fedora"
[2026-02-04 00:52:22] VERSION_ID="7"
[2026-02-04 00:52:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 00:52:22] ANSI_COLOR="0;31"
[2026-02-04 00:52:22] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 00:52:22] HOME_URL="https://www.centos.org/"
[2026-02-04 00:52:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 00:52:22] 
[2026-02-04 00:52:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 00:52:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 00:52:22] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 00:52:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 00:52:22] 
[2026-02-04 00:52:22] 2026-02-04 05:51:34,056 | INFO     | **************************************
[2026-02-04 00:52:22] 2026-02-04 05:51:34,559 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-04 00:52:22] 2026-02-04 05:51:34,596 | INFO     | sufficient remaining disk space (51112837120 B)
[2026-02-04 00:52:22] 2026-02-04 05:51:34,596 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 00:52:22] 2026-02-04 05:51:34,597 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 00:52:22] 2026-02-04 05:51:34,597 | INFO     | update_server=False
[2026-02-04 00:52:22] 2026-02-04 05:51:34,597 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 00:52:22] 2026-02-04 05:51:34,991 | INFO     | all data control threads have been joined
[2026-02-04 00:52:22] 2026-02-04 05:51:35,060 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 00:52:22] 2026-02-04 05:51:35,327 | INFO     | all payload control threads have been joined
[2026-02-04 00:52:22] 2026-02-04 05:51:35,404 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 00:52:22] 2026-02-04 05:51:35,404 | INFO     | aborting loop
[2026-02-04 00:52:22] 2026-02-04 05:51:35,604 | INFO     | [job] retrieve thread has finished
[2026-02-04 00:52:22] 2026-02-04 05:51:35,636 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 00:52:22] 2026-02-04 05:51:35,703 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 00:52:22] 2026-02-04 05:51:35,940 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 00:52:22] 2026-02-04 05:51:35,998 | INFO     | [data] control thread has finished
[2026-02-04 00:52:22] 2026-02-04 05:51:36,094 | INFO     | all job control threads have been joined
[2026-02-04 00:52:22] 2026-02-04 05:51:36,106 | INFO     | [job] validate thread has finished
[2026-02-04 00:52:22] 2026-02-04 05:51:36,338 | INFO     | [payload] control thread has finished
[2026-02-04 00:52:22] 2026-02-04 05:51:36,407 | INFO     | [payload] failed_post thread has finished
[2026-02-04 00:52:22] 2026-02-04 05:51:36,411 | INFO     | [job] job monitor thread has finished
[2026-02-04 00:52:22] 2026-02-04 05:51:36,608 | INFO     | [data] copytool_in thread has finished
[2026-02-04 00:52:22] 2026-02-04 05:51:36,726 | INFO     | [payload] validate_post thread has finished
[2026-02-04 00:52:22] 2026-02-04 05:51:37,021 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 00:52:22] 2026-02-04 05:51:37,066 | INFO     | [data] copytool_out thread has finished
[2026-02-04 00:52:22] 2026-02-04 05:51:37,078 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 00:52:22] 2026-02-04 05:51:37,088 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 00:52:22] 2026-02-04 05:51:37,100 | INFO     | [job] control thread has finished
[2026-02-04 00:52:22] 2026-02-04 05:51:38,084 | INFO     | [job] queue monitor thread has finished
[2026-02-04 00:52:22] 2026-02-04 05:51:39,713 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 00:52:22] 2026-02-04 05:52:05,461 | INFO     | PID=2185361 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-04 00:52:22] 2026-02-04 05:52:05,461 | INFO     | .. there are 27 such processes running
[2026-02-04 00:52:22] 2026-02-04 05:52:05,462 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 00:52:22] 2026-02-04 05:52:05,463 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 00:52:22] 2026-02-04 05:52:05,463 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 00:52:22] 2026-02-04 05:52:14,944 | INFO     | [monitor] cgroup control has ended
[2026-02-04 00:52:22] 2026-02-04 05:52:16,434 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140185224992576)>', '<ExcThread(monitor, started 140184695854848)>']
[2026-02-04 00:52:22] 2026-02-04 05:52:16,531 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 00:52:22] 2026-02-04 05:52:16,532 | INFO     | [monitor] control thread has ended
[2026-02-04 00:52:22] 2026-02-04 05:52:21,460 | INFO     | all workflow threads have been joined
[2026-02-04 00:52:22] 2026-02-04 05:52:21,461 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 00:52:22] 2026-02-04 05:52:21,461 | INFO     | traces error code: 0
[2026-02-04 00:52:22] 2026-02-04 05:52:21,461 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 00:52:22] 2026-02-04 05:52:21,685 [wrapper] ==== pilot stdout END ====
[2026-02-04 00:52:22] 2026-02-04 05:52:21,699 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 00:52:22] 2026-02-04 05:52:21,726 [wrapper] pilotpid: 2185361
[2026-02-04 00:52:22] 2026-02-04 05:52:21,732 [wrapper] Pilot exit status: 0
[2026-02-04 00:52:22] 2026-02-04 05:52:21,761 [wrapper] pandaids: 6994938058
[2026-02-04 00:52:22] 2026-02-04 05:52:21,904 [wrapper] cleanup supervisor_pilot 2182957 2185362
[2026-02-04 00:52:22] 2026-02-04 05:52:21,910 [wrapper] Test setup, not cleaning
[2026-02-04 00:52:22] 2026-02-04 05:52:21,950 [wrapper] apfmon messages muted
[2026-02-04 00:52:22] 2026-02-04 05:52:21,959 [wrapper] ==== wrapper stdout END ====
[2026-02-04 00:52:22] 2026-02-04 05:52:22,005 [wrapper] ==== wrapper stderr END ====
[2026-02-04 00:52:22]  *** Error codes and diagnostics ***
[2026-02-04 00:52:22]     "exeErrorCode": 0,
[2026-02-04 00:52:22]     "exeErrorDiag": "",
[2026-02-04 00:52:22]     "pilotErrorCode": 0,
[2026-02-04 00:52:22]     "pilotErrorDiag": "",
[2026-02-04 00:52:22]  *** Listing of results directory ***
[2026-02-04 00:52:22] total 675512
[2026-02-04 00:52:22] -rw-r--r--. 1 boincer umatlas      5111 Jan 31 16:17 queuedata.json
[2026-02-04 00:52:22] -rw-r--r--. 1 boincer umatlas    584422 Jan 31 16:17 pilot3.tar.gz
[2026-02-04 00:52:22] -rwx------. 1 boincer umatlas     36322 Jan 31 16:17 runpilot2-wrapper.sh
[2026-02-04 00:52:22] -rw-r--r--. 1 boincer umatlas       100 Feb  3 16:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 00:52:22] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  3 16:54 run_atlas
[2026-02-04 00:52:22] -rw-r--r--. 1 boincer umatlas       105 Feb  3 16:54 job.xml
[2026-02-04 00:52:22] -rw-r--r--. 2 boincer umatlas 493763330 Feb  3 16:54 EVNT.48317889._000093.pool.root.1
[2026-02-04 00:52:22] -rw-r--r--. 2 boincer umatlas    597762 Feb  3 16:54 input.tar.gz
[2026-02-04 00:52:22] -rw-r--r--. 2 boincer umatlas     15845 Feb  3 16:54 start_atlas.sh
[2026-02-04 00:52:22] drwxrwx--x. 2 boincer umatlas      4096 Feb  3 16:54 shared
[2026-02-04 00:52:22] -rw-r--r--. 1 boincer umatlas         0 Feb  3 16:54 boinc_lockfile
[2026-02-04 00:52:22] -rw-r--r--. 1 boincer umatlas      2521 Feb  3 16:54 pandaJob.out
[2026-02-04 00:52:22] -rw-------. 1 boincer umatlas        57 Feb  3 16:54 setup.sh.local
[2026-02-04 00:52:22] -rw-------. 1 boincer umatlas   1009252 Feb  3 16:55 agis_schedconf.cvmfs.json
[2026-02-04 00:52:22] -rw-------. 1 boincer umatlas       442 Feb  3 16:56 workernode_map.json
[2026-02-04 00:52:22] drwx------. 5 boincer umatlas      4096 Feb  3 16:56 pilot3
[2026-02-04 00:52:22] -rw-r--r--. 1 boincer umatlas      6524 Feb  4 00:47 init_data.xml
[2026-02-04 00:52:22] -rw-------. 1 boincer umatlas 186042347 Feb  4 00:50 HITS.48317892._004807.pool.root.1
[2026-02-04 00:52:22] -rw-r--r--. 1 boincer umatlas       531 Feb  4 00:50 boinc_task_state.xml
[2026-02-04 00:52:22] -rw-------. 1 boincer umatlas      1046 Feb  4 00:51 memory_monitor_summary.json
[2026-02-04 00:52:22] -rw-------. 1 boincer umatlas   1511668 Feb  4 00:51 agis_ddmendpoints.agis.ALL.json
[2026-02-04 00:52:22] -rw-------. 1 boincer umatlas    667031 Feb  4 00:51 log.48317892._004807.job.log.tgz.1
[2026-02-04 00:52:22] -rw-------. 1 boincer umatlas      6393 Feb  4 00:51 heartbeat.json
[2026-02-04 00:52:22] -rw-r--r--. 1 boincer umatlas      8192 Feb  4 00:51 boinc_mmap_file
[2026-02-04 00:52:22] -rw-r--r--. 1 boincer umatlas        28 Feb  4 00:51 wrapper_checkpoint.txt
[2026-02-04 00:52:22] -rw-------. 1 boincer umatlas        95 Feb  4 00:52 pilot_heartbeat.json
[2026-02-04 00:52:22] -rw-------. 1 boincer umatlas      4820 Feb  4 00:52 pilotlog.txt
[2026-02-04 00:52:22] -rw-------. 1 boincer umatlas   3321408 Feb  4 00:52 log.48317892._004807.job.log.1
[2026-02-04 00:52:22] -rw-------. 1 boincer umatlas       357 Feb  4 00:52 output.list
[2026-02-04 00:52:22] -rw-r--r--. 1 boincer umatlas       620 Feb  4 00:52 runtime_log
[2026-02-04 00:52:22] -rw-------. 1 boincer umatlas   4003840 Feb  4 00:52 result.tar.gz
[2026-02-04 00:52:22] -rw-r--r--. 1 boincer umatlas      9342 Feb  4 00:52 runtime_log.err
[2026-02-04 00:52:22] -rw-------. 1 boincer umatlas       658 Feb  4 00:52 7oaMDmRWX68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmcdOKDmPeH4zm.diag
[2026-02-04 00:52:22] -rw-r--r--. 1 boincer umatlas     21394 Feb  4 00:52 stderr.txt
[2026-02-04 00:52:22] HITS file was successfully produced:
[2026-02-04 00:52:22] -rw-------. 1 boincer umatlas 186042347 Feb  4 00:50 shared/HITS.pool.root.1
[2026-02-04 00:52:22]  *** Contents of shared directory: ***
[2026-02-04 00:52:22] total 668396
[2026-02-04 00:52:22] -rw-r--r--. 2 boincer umatlas 493763330 Feb  3 16:54 ATLAS.root_0
[2026-02-04 00:52:22] -rw-r--r--. 2 boincer umatlas    597762 Feb  3 16:54 input.tar.gz
[2026-02-04 00:52:22] -rw-r--r--. 2 boincer umatlas     15845 Feb  3 16:54 start_atlas.sh
[2026-02-04 00:52:22] -rw-------. 1 boincer umatlas 186042347 Feb  4 00:50 HITS.pool.root.1
[2026-02-04 00:52:22] -rw-------. 1 boincer umatlas   4003840 Feb  4 00:52 result.tar.gz
00:52:23 (2178407): run_atlas exited; CPU time 87587.782344
00:52:23 (2178407): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN