Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:52:55 (3634836): wrapper (7.7.26015): starting
22:52:55 (3634836): wrapper: running run_atlas (--nthreads 12)
[2026-02-03 22:52:55] Arguments: --nthreads 12
[2026-02-03 22:52:55] Threads: 12
[2026-02-03 22:52:55] Checking for CVMFS
[2026-02-03 22:52:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-03 22:52:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-03 22:52:55] Running cvmfs_config stat atlas.cern.ch
[2026-02-03 22:52:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-03 22:52:55] 2.13.3.0 1795012 5427 69196 155844 0 50 3619781 4097025 922 130560 0 4226460 99.991 196814 16096 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2026-02-03 22:52:55] CVMFS is ok
[2026-02-03 22:52:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-03 22:52:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-03 22:52:55] Further information can be found at the LHC@home message board.
[2026-02-03 22:52:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 22:52:55] Checking for apptainer binary...
[2026-02-03 22:52:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-03 22:52:55] Running /usr/bin/apptainer --version
[2026-02-03 22:52:56] apptainer version 1.4.5-2.el9
[2026-02-03 22:52:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 22:52:56] pckelar8.cern.ch
[2026-02-03 22:52:56] apptainer works
[2026-02-03 22:52:56] Set ATHENA_PROC_NUMBER=12
[2026-02-03 22:52:56] Set ATHENA_CORE_NUMBER=12
[2026-02-03 22:52:56] Starting ATLAS job with PandaID=6983772718
[2026-02-03 22:52:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 00:56:28]  *** The last 200 lines of the pilot log: ***
[2026-02-04 00:56:28] 2026-02-03 23:55:44,081 | INFO     | mean y: 2703226.033333333
[2026-02-04 00:56:28] 2026-02-03 23:55:44,081 | INFO     | intersect: -25839560445.152916
[2026-02-04 00:56:28] 2026-02-03 23:55:44,081 | INFO     | chi2: 1.3823215522092027
[2026-02-04 00:56:28] 2026-02-03 23:55:44,082 | INFO     | sum of square deviations: 471562330.0
[2026-02-04 00:56:28] 2026-02-03 23:55:44,082 | INFO     | sum of deviations: 7421604223.0
[2026-02-04 00:56:28] 2026-02-03 23:55:44,083 | INFO     | mean x: 1770159092.0
[2026-02-04 00:56:28] 2026-02-03 23:55:44,083 | INFO     | mean y: 2702275.104347826
[2026-02-04 00:56:28] 2026-02-03 23:55:44,083 | INFO     | intersect: -27856648136.89537
[2026-02-04 00:56:28] 2026-02-03 23:55:44,083 | INFO     | chi2: 1.384221393507703
[2026-02-04 00:56:28] 2026-02-03 23:55:44,084 | INFO     | current chi2=1.384221393507703 (change=-0.1374384487794464 %)
[2026-02-04 00:56:28] 2026-02-03 23:55:44,084 | INFO     | right removable region: 114
[2026-02-04 00:56:28] 2026-02-03 23:55:44,084 | INFO     | sum of square deviations: 471562330.0
[2026-02-04 00:56:28] 2026-02-03 23:55:44,085 | INFO     | sum of deviations: -8377070708.0
[2026-02-04 00:56:28] 2026-02-03 23:55:44,085 | INFO     | mean x: 1770159397.0
[2026-02-04 00:56:28] 2026-02-03 23:55:44,085 | INFO     | mean y: 2740856.2782608694
[2026-02-04 00:56:28] 2026-02-03 23:55:44,085 | INFO     | intersect: 31448743833.444912
[2026-02-04 00:56:28] 2026-02-03 23:55:44,086 | INFO     | chi2: 0.14995065776938168
[2026-02-04 00:56:28] 2026-02-03 23:55:44,086 | INFO     | current chi2=0.14995065776938168 (change=89.15225928947335 %)
[2026-02-04 00:56:28] 2026-02-03 23:55:44,086 | INFO     | sum of square deviations: 412686807.5
[2026-02-04 00:56:28] 2026-02-03 23:55:44,087 | INFO     | sum of deviations: -4648795756.499998
[2026-02-04 00:56:28] 2026-02-03 23:55:44,087 | INFO     | mean x: 1770159549.5
[2026-02-04 00:56:28] 2026-02-03 23:55:44,088 | INFO     | mean y: 2731029.6636363636
[2026-02-04 00:56:28] 2026-02-03 23:55:44,088 | INFO     | intersect: 19943058785.460743
[2026-02-04 00:56:28] 2026-02-03 23:55:44,088 | INFO     | chi2: 0.11030689112046276
[2026-02-04 00:56:28] 2026-02-03 23:55:44,088 | INFO     | current chi2=0.11030689112046276 (change=26.437874457269476 %)
[2026-02-04 00:56:28] 2026-02-03 23:55:44,089 | INFO     | sum of square deviations: 358927660.0
[2026-02-04 00:56:28] 2026-02-03 23:55:44,089 | INFO     | sum of deviations: 1522351196.9999995
[2026-02-04 00:56:28] 2026-02-03 23:55:44,090 | INFO     | mean x: 1770159702.0
[2026-02-04 00:56:28] 2026-02-03 23:55:44,090 | INFO     | mean y: 2713502.5904761907
[2026-02-04 00:56:28] 2026-02-03 23:55:44,090 | INFO     | intersect: -7505219269.213353
[2026-02-04 00:56:28] 2026-02-03 23:55:44,090 | INFO     | chi2: 0.024442799682727338
[2026-02-04 00:56:28] 2026-02-03 23:55:44,090 | INFO     | current chi2=0.024442799682727338 (change=77.84109457310868 %)
[2026-02-04 00:56:28] 2026-02-03 23:55:44,091 | INFO     | sum of square deviations: 310052325.0
[2026-02-04 00:56:28] 2026-02-03 23:55:44,092 | INFO     | sum of deviations: 2336975483.4999995
[2026-02-04 00:56:28] 2026-02-03 23:55:44,092 | INFO     | mean x: 1770159854.5
[2026-02-04 00:56:28] 2026-02-03 23:55:44,092 | INFO     | mean y: 2711119.63
[2026-02-04 00:56:28] 2026-02-03 23:55:44,092 | INFO     | intersect: -13339618056.074219
[2026-02-04 00:56:28] 2026-02-03 23:55:44,092 | INFO     | chi2: 0.0006111225380799539
[2026-02-04 00:56:28] 2026-02-03 23:55:44,093 | INFO     | current chi2=0.0006111225380799539 (change=97.49978502457797 %)
[2026-02-04 00:56:28] 2026-02-03 23:55:44,093 | INFO     | sum of square deviations: 265828240.0
[2026-02-04 00:56:28] 2026-02-03 23:55:44,094 | INFO     | sum of deviations: 1816112862.0
[2026-02-04 00:56:28] 2026-02-03 23:55:44,094 | INFO     | mean x: 1770160007.0
[2026-02-04 00:56:28] 2026-02-03 23:55:44,094 | INFO     | mean y: 2712910.9263157896
[2026-02-04 00:56:28] 2026-02-03 23:55:44,094 | INFO     | intersect: -12090849294.92025
[2026-02-04 00:56:28] 2026-02-03 23:55:44,094 | INFO     | chi2: 0.00046417337540138464
[2026-02-04 00:56:28] 2026-02-03 23:55:44,095 | INFO     | current chi2=0.00046417337540138464 (change=24.045776995929373 %)
[2026-02-04 00:56:28] 2026-02-03 23:55:44,095 | INFO     | left removable region: 50
[2026-02-04 00:56:28] 2026-02-03 23:55:44,095 | INFO     | sum of square deviations: 81266640.0
[2026-02-04 00:56:28] 2026-02-03 23:55:44,096 | INFO     | sum of deviations: 438156564.5
[2026-02-04 00:56:28] 2026-02-03 23:55:44,096 | INFO     | mean x: 1770160586.5
[2026-02-04 00:56:28] 2026-02-03 23:55:44,096 | INFO     | mean y: 2718217.640625
[2026-02-04 00:56:28] 2026-02-03 23:55:44,096 | INFO     | intersect: -9541265404.595325
[2026-02-04 00:56:28] 2026-02-03 23:55:44,096 | INFO     | chi2: 8.502111544471492e-05
[2026-02-04 00:56:28] 2026-02-03 23:55:44,097 | INFO     | current memory leak: 5.39 B/s (using 64 data points, chi2=0.00)
[2026-02-04 00:56:28] 2026-02-03 23:55:44,097 | INFO     | could have reported an average CPU frequency of 2808 MHz (8 samples)
[2026-02-04 00:56:28] 2026-02-03 23:55:44,097 | INFO     | ..............................
[2026-02-04 00:56:28] 2026-02-03 23:55:44,098 | INFO     | . Timing measurements:
[2026-02-04 00:56:28] 2026-02-03 23:55:44,098 | INFO     | . get job = 0 s
[2026-02-04 00:56:28] 2026-02-03 23:55:44,098 | INFO     | . initial setup = 4 s
[2026-02-04 00:56:28] 2026-02-03 23:55:44,098 | INFO     | . payload setup = 7 s
[2026-02-04 00:56:28] 2026-02-03 23:55:44,098 | INFO     | . stage-in = 0 s
[2026-02-04 00:56:28] 2026-02-03 23:55:44,098 | INFO     | . payload execution = 7323 s
[2026-02-04 00:56:28] 2026-02-03 23:55:44,099 | INFO     | . stage-out = 1 s
[2026-02-04 00:56:28] 2026-02-03 23:55:44,099 | INFO     | . log creation = 0 s
[2026-02-04 00:56:28] 2026-02-03 23:55:44,099 | INFO     | ..............................
[2026-02-04 00:56:28] 2026-02-03 23:55:44,255 | INFO     | 
[2026-02-04 00:56:28] 2026-02-03 23:55:44,255 | INFO     | job summary report
[2026-02-04 00:56:28] 2026-02-03 23:55:44,255 | INFO     | --------------------------------------------------
[2026-02-04 00:56:28] 2026-02-03 23:55:44,256 | INFO     | PanDA job id: 6983772718
[2026-02-04 00:56:28] 2026-02-03 23:55:44,256 | INFO     | task id: 48318042
[2026-02-04 00:56:28] 2026-02-03 23:55:44,257 | INFO     | errors: (none)
[2026-02-04 00:56:28] 2026-02-03 23:55:44,257 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 00:56:28] 2026-02-03 23:55:44,257 | INFO     | pilot state: finished 
[2026-02-04 00:56:28] 2026-02-03 23:55:44,257 | INFO     | transexitcode: 0
[2026-02-04 00:56:28] 2026-02-03 23:55:44,257 | INFO     | exeerrorcode: 0
[2026-02-04 00:56:28] 2026-02-03 23:55:44,257 | INFO     | exeerrordiag: 
[2026-02-04 00:56:28] 2026-02-03 23:55:44,257 | INFO     | exitcode: 0
[2026-02-04 00:56:28] 2026-02-03 23:55:44,258 | INFO     | exitmsg: OK
[2026-02-04 00:56:28] 2026-02-03 23:55:44,258 | INFO     | cpuconsumptiontime: 82087 s
[2026-02-04 00:56:28] 2026-02-03 23:55:44,258 | INFO     | nevents: 400
[2026-02-04 00:56:28] 2026-02-03 23:55:44,258 | INFO     | neventsw: 0
[2026-02-04 00:56:28] 2026-02-03 23:55:44,258 | INFO     | pid: 3644275
[2026-02-04 00:56:28] 2026-02-03 23:55:44,258 | INFO     | pgrp: 3644275
[2026-02-04 00:56:28] 2026-02-03 23:55:44,259 | INFO     | corecount: 12
[2026-02-04 00:56:28] 2026-02-03 23:55:44,259 | INFO     | event service: False
[2026-02-04 00:56:28] 2026-02-03 23:55:44,259 | INFO     | sizes: {0: 2278076, 1: 2278310, 12: 2278310, 7334: 2305659, 7335: 2305658, 7337: 2314712, 7338: 2314896, 7341: 2315090}
[2026-02-04 00:56:28] 2026-02-03 23:55:44,259 | INFO     | --------------------------------------------------
[2026-02-04 00:56:28] 2026-02-03 23:55:44,259 | INFO     | 
[2026-02-04 00:56:28] 2026-02-03 23:55:44,259 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2026-02-04 00:56:28] 2026-02-03 23:55:44,277 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 00:56:28] 2026-02-03 23:55:44,278 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 00:56:28] 2026-02-03 23:55:44,278 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 00:56:28] 2026-02-03 23:55:44,278 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 00:56:28] 2026-02-03 23:55:44,278 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 00:56:28] 2026-02-03 23:55:44,279 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 00:56:28] 2026-02-03 23:55:44,279 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 00:56:28] 2026-02-03 23:55:44,279 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 00:56:28] 2026-02-03 23:55:44,279 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 00:56:28] 2026-02-03 23:55:44,279 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 00:56:28] 2026-02-03 23:55:44,280 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 00:56:28] 2026-02-03 23:55:44,280 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 00:56:28] 2026-02-03 23:55:44,280 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 00:56:28] 2026-02-03 23:55:44,280 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 00:56:28] 2026-02-03 23:55:44,280 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 00:56:28] 2026-02-03 23:55:44,281 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 00:56:28] 2026-02-03 23:55:44,281 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 00:56:28] 2026-02-03 23:55:44,281 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 00:56:28] 2026-02-03 23:55:44,281 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 00:56:28] 2026-02-03 23:55:44,281 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 00:56:28] 2026-02-03 23:55:44,282 | INFO     | job 6983772718 has completed (purged errors)
[2026-02-04 00:56:28] 2026-02-03 23:55:44,282 | INFO     | overall cleanup function is called
[2026-02-04 00:56:28] 2026-02-03 23:55:45,291 | INFO     | --- collectZombieJob: --- 10, [3644275]
[2026-02-04 00:56:28] 2026-02-03 23:55:45,291 | INFO     | zombie collector waiting for pid 3644275
[2026-02-04 00:56:28] 2026-02-03 23:55:45,292 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 00:56:28] 2026-02-03 23:55:45,292 | INFO     | collected zombie processes
[2026-02-04 00:56:28] 2026-02-03 23:55:45,292 | INFO     | will attempt to kill all subprocesses of pid=3644275
[2026-02-04 00:56:28] 2026-02-03 23:55:45,473 | INFO     | process IDs to be killed: [3644275] (in reverse order)
[2026-02-04 00:56:28] 2026-02-03 23:55:45,531 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 00:56:28] 2026-02-03 23:55:45,532 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 00:56:28] 2026-02-03 23:55:45,538 | INFO     | did not find any defunct processes belonging to 3644275
[2026-02-04 00:56:28] 2026-02-03 23:55:45,545 | INFO     | did not find any defunct processes belonging to 3644275
[2026-02-04 00:56:28] 2026-02-03 23:55:45,545 | INFO     | ready for new job
[2026-02-04 00:56:28] 2026-02-03 23:55:45,545 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 00:56:28] 2026-02-03 23:55:45,547 | INFO     | **************************************
[2026-02-04 00:56:28] 2026-02-03 23:55:45,547 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 00:56:28] 2026-02-03 23:55:45,548 | INFO     | **************************************
[2026-02-04 00:56:28] 2026-02-03 23:55:45,548 | INFO     | 
[2026-02-04 00:56:28] 2026-02-03 23:55:45,549 | INFO     | architecture information:
[2026-02-04 00:56:28] 2026-02-03 23:55:45,550 | INFO     | executing command: cat /etc/os-release
[2026-02-04 00:56:28] 2026-02-03 23:55:45,565 | INFO     | cat /etc/os-release:
[2026-02-04 00:56:28] NAME="CentOS Linux"
[2026-02-04 00:56:28] VERSION="7 (Core)"
[2026-02-04 00:56:28] ID="centos"
[2026-02-04 00:56:28] ID_LIKE="rhel fedora"
[2026-02-04 00:56:28] VERSION_ID="7"
[2026-02-04 00:56:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 00:56:28] ANSI_COLOR="0;31"
[2026-02-04 00:56:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 00:56:28] HOME_URL="https://www.centos.org/"
[2026-02-04 00:56:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 00:56:28] 
[2026-02-04 00:56:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 00:56:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 00:56:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 00:56:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 00:56:28] 
[2026-02-04 00:56:28] 2026-02-03 23:55:45,565 | INFO     | **************************************
[2026-02-04 00:56:28] 2026-02-03 23:55:46,069 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2026-02-04 00:56:28] 2026-02-03 23:55:46,085 | INFO     | sufficient remaining disk space (1708853821440 B)
[2026-02-04 00:56:28] 2026-02-03 23:55:46,085 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 00:56:28] 2026-02-03 23:55:46,086 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 00:56:28] 2026-02-03 23:55:46,086 | INFO     | update_server=False
[2026-02-04 00:56:28] 2026-02-03 23:55:46,086 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 00:56:28] 2026-02-03 23:55:46,086 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 00:56:28] 2026-02-03 23:55:46,087 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 00:56:28] 2026-02-03 23:55:46,552 | INFO     | all data control threads have been joined
[2026-02-04 00:56:28] 2026-02-03 23:55:46,660 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 00:56:28] 2026-02-03 23:55:46,660 | INFO     | aborting loop
[2026-02-04 00:56:28] 2026-02-03 23:55:46,689 | INFO     | all payload control threads have been joined
[2026-02-04 00:56:28] 2026-02-03 23:55:47,092 | INFO     | [job] retrieve thread has finished
[2026-02-04 00:56:28] 2026-02-03 23:55:47,092 | INFO     | [job] queue monitor thread has finished
[2026-02-04 00:56:28] 2026-02-03 23:55:47,194 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 00:56:28] 2026-02-03 23:55:47,209 | INFO     | [payload] validate_post thread has finished
[2026-02-04 00:56:28] 2026-02-03 23:55:47,218 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 00:56:28] 2026-02-03 23:55:47,265 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 00:56:28] 2026-02-03 23:55:47,383 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 00:56:28] 2026-02-03 23:55:47,385 | INFO     | all job control threads have been joined
[2026-02-04 00:56:28] 2026-02-03 23:55:47,558 | INFO     | [data] control thread has finished
[2026-02-04 00:56:28] 2026-02-03 23:55:47,662 | INFO     | [job] job monitor thread has finished
[2026-02-04 00:56:28] 2026-02-03 23:55:47,694 | INFO     | [payload] control thread has finished
[2026-02-04 00:56:28] 2026-02-03 23:55:47,829 | INFO     | [data] copytool_in thread has finished
[2026-02-04 00:56:28] 2026-02-03 23:55:47,967 | INFO     | [job] validate thread has finished
[2026-02-04 00:56:28] 2026-02-03 23:55:48,040 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 00:56:28] 2026-02-03 23:55:48,093 | INFO     | [data] copytool_out thread has finished
[2026-02-04 00:56:28] 2026-02-03 23:55:48,233 | INFO     | [payload] failed_post thread has finished
[2026-02-04 00:56:28] 2026-02-03 23:55:48,391 | INFO     | [job] control thread has finished
[2026-02-04 00:56:28] 2026-02-03 23:55:51,271 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 00:56:28] 2026-02-03 23:56:16,788 | INFO     | PID=3638963 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-04 00:56:28] 2026-02-03 23:56:16,788 | INFO     | .. there are 2 such processes running
[2026-02-04 00:56:28] 2026-02-03 23:56:16,789 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 00:56:28] 2026-02-03 23:56:16,789 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 00:56:28] 2026-02-03 23:56:16,789 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 00:56:28] 2026-02-03 23:56:22,699 | INFO     | [monitor] cgroup control has ended
[2026-02-04 00:56:28] 2026-02-03 23:56:22,857 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139756683077440)>', '<ExcThread(monitor, started 139756147042048)>']
[2026-02-04 00:56:28] 2026-02-03 23:56:23,823 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 00:56:28] 2026-02-03 23:56:23,824 | INFO     | [monitor] control thread has ended
[2026-02-04 00:56:28] 2026-02-03 23:56:27,883 | INFO     | all workflow threads have been joined
[2026-02-04 00:56:28] 2026-02-03 23:56:27,883 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 00:56:28] 2026-02-03 23:56:27,884 | INFO     | traces error code: 0
[2026-02-04 00:56:28] 2026-02-03 23:56:27,884 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 00:56:28] 2026-02-03 23:56:28,012 [wrapper] ==== pilot stdout END ====
[2026-02-04 00:56:28] 2026-02-03 23:56:28,015 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 00:56:28] 2026-02-03 23:56:28,018 [wrapper] pilotpid: 3638963
[2026-02-04 00:56:28] 2026-02-03 23:56:28,021 [wrapper] Pilot exit status: 0
[2026-02-04 00:56:28] 2026-02-03 23:56:28,032 [wrapper] pandaids: 6983772718
[2026-02-04 00:56:28] 2026-02-03 23:56:28,069 [wrapper] cleanup supervisor_pilot 3678924 3638964
[2026-02-04 00:56:28] 2026-02-03 23:56:28,072 [wrapper] Test setup, not cleaning
[2026-02-04 00:56:28] 2026-02-03 23:56:28,075 [wrapper] apfmon messages muted
[2026-02-04 00:56:28] 2026-02-03 23:56:28,077 [wrapper] ==== wrapper stdout END ====
[2026-02-04 00:56:28] 2026-02-03 23:56:28,080 [wrapper] ==== wrapper stderr END ====
[2026-02-04 00:56:28]  *** Error codes and diagnostics ***
[2026-02-04 00:56:28]     "exeErrorCode": 0,
[2026-02-04 00:56:28]     "exeErrorDiag": "",
[2026-02-04 00:56:28]     "pilotErrorCode": 0,
[2026-02-04 00:56:28]     "pilotErrorDiag": "",
[2026-02-04 00:56:28]  *** Listing of results directory ***
[2026-02-04 00:56:28] total 679072
[2026-02-04 00:56:28] -rwx------ 1 boinc boinc     36322 Jan 26 04:18 runpilot2-wrapper.sh
[2026-02-04 00:56:28] -rw-r--r-- 1 boinc boinc      5111 Jan 26 04:19 queuedata.json
[2026-02-04 00:56:28] -rw-r--r-- 1 boinc boinc    584422 Jan 26 04:19 pilot3.tar.gz
[2026-02-04 00:56:28] -rw-r--r-- 1 boinc boinc       100 Feb  3 22:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 00:56:28] -rwxr-xr-x 1 boinc boinc      7986 Feb  3 22:52 run_atlas
[2026-02-04 00:56:28] -rw-r--r-- 1 boinc boinc       105 Feb  3 22:52 job.xml
[2026-02-04 00:56:28] -rw-r--r-- 1 boinc boinc      6297 Feb  3 22:52 init_data.xml
[2026-02-04 00:56:28] -rw-r--r-- 2 boinc boinc 501075542 Feb  3 22:52 EVNT.48318040._000037.pool.root.1
[2026-02-04 00:56:28] -rw-r--r-- 2 boinc boinc     15845 Feb  3 22:52 start_atlas.sh
[2026-02-04 00:56:28] drwxrwx--x 2 boinc boinc      4096 Feb  3 22:52 shared
[2026-02-04 00:56:28] -rw-r--r-- 2 boinc boinc    597767 Feb  3 22:52 input.tar.gz
[2026-02-04 00:56:28] -rw-r--r-- 1 boinc boinc         0 Feb  3 22:52 boinc_lockfile
[2026-02-04 00:56:28] -rw-r--r-- 1 boinc boinc      2533 Feb  3 22:52 pandaJob.out
[2026-02-04 00:56:28] -rw------- 1 boinc boinc   1009252 Feb  3 22:53 agis_schedconf.cvmfs.json
[2026-02-04 00:56:28] -rw------- 1 boinc boinc   1511668 Feb  3 22:53 agis_ddmendpoints.agis.ALL.json
[2026-02-04 00:56:28] -rw------- 1 boinc boinc       436 Feb  3 22:53 workernode_map.json
[2026-02-04 00:56:28] drwx------ 5 boinc boinc      4096 Feb  3 22:53 pilot3
[2026-02-04 00:56:28] -rw------- 1 boinc boinc 187351526 Feb  4 00:55 HITS.48318042._001842.pool.root.1
[2026-02-04 00:56:28] -rw-r--r-- 1 boinc boinc       530 Feb  4 00:55 boinc_task_state.xml
[2026-02-04 00:56:28] -rw------- 1 boinc boinc        95 Feb  4 00:55 pilot_heartbeat.json
[2026-02-04 00:56:28] -rw------- 1 boinc boinc      1021 Feb  4 00:55 memory_monitor_summary.json
[2026-02-04 00:56:28] -rw------- 1 boinc boinc    444407 Feb  4 00:55 log.48318042._001842.job.log.tgz.1
[2026-02-04 00:56:28] -rw------- 1 boinc boinc      6349 Feb  4 00:55 heartbeat.json
[2026-02-04 00:56:28] -rw-r--r-- 1 boinc boinc      8192 Feb  4 00:56 boinc_mmap_file
[2026-02-04 00:56:28] -rw-r--r-- 1 boinc boinc        27 Feb  4 00:56 wrapper_checkpoint.txt
[2026-02-04 00:56:28] -rw------- 1 boinc boinc      4821 Feb  4 00:56 pilotlog.txt
[2026-02-04 00:56:28] -rw------- 1 boinc boinc   1058230 Feb  4 00:56 log.48318042._001842.job.log.1
[2026-02-04 00:56:28] -rw------- 1 boinc boinc       357 Feb  4 00:56 output.list
[2026-02-04 00:56:28] -rw-r--r-- 1 boinc boinc       620 Feb  4 00:56 runtime_log
[2026-02-04 00:56:28] -rw------- 1 boinc boinc   1515520 Feb  4 00:56 result.tar.gz
[2026-02-04 00:56:28] -rw------- 1 boinc boinc       658 Feb  4 00:56 zWaKDmTIS48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmTO2KDm2hLXYm.diag
[2026-02-04 00:56:28] -rw-r--r-- 1 boinc boinc      8840 Feb  4 00:56 runtime_log.err
[2026-02-04 00:56:28] -rw-r--r-- 1 boinc boinc     20882 Feb  4 00:56 stderr.txt
[2026-02-04 00:56:28] HITS file was successfully produced:
[2026-02-04 00:56:28] -rw------- 1 boinc boinc 187351526 Feb  4 00:55 shared/HITS.pool.root.1
[2026-02-04 00:56:28]  *** Contents of shared directory: ***
[2026-02-04 00:56:28] total 674384
[2026-02-04 00:56:28] -rw-r--r-- 2 boinc boinc 501075542 Feb  3 22:52 ATLAS.root_0
[2026-02-04 00:56:28] -rw-r--r-- 2 boinc boinc     15845 Feb  3 22:52 start_atlas.sh
[2026-02-04 00:56:28] -rw-r--r-- 2 boinc boinc    597767 Feb  3 22:52 input.tar.gz
[2026-02-04 00:56:28] -rw------- 1 boinc boinc 187351526 Feb  4 00:55 HITS.pool.root.1
[2026-02-04 00:56:28] -rw------- 1 boinc boinc   1515520 Feb  4 00:56 result.tar.gz
00:56:29 (3634836): run_atlas exited; CPU time 82221.578495
00:56:29 (3634836): called boinc_finish(0)

</stderr_txt>
]]>

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