Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
21:00:04 (3687304): wrapper (7.7.26015): starting
21:00:04 (3687304): wrapper: running run_atlas (--nthreads 12)
[2026-02-03 21:00:04] Arguments: --nthreads 12
[2026-02-03 21:00:04] Threads: 12
[2026-02-03 21:00:04] Checking for CVMFS
[2026-02-03 21:00:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-03 21:00:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-03 21:00:04] Running cvmfs_config stat atlas.cern.ch
[2026-02-03 21:00:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-03 21:00:05] 2.11.0.0 921820 7189 92612 155843 1 188 4727209 6144001 11867 130560 0 69891562 99.999 270927 160 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-02-03 21:00:05] CVMFS is ok
[2026-02-03 21:00:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 21:00:05] Checking for apptainer binary...
[2026-02-03 21:00:05] apptainer is not installed, using version from CVMFS
[2026-02-03 21:00:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 21:00:05] radiat0r
[2026-02-03 21:00:05] apptainer works
[2026-02-03 21:00:05] Set ATHENA_PROC_NUMBER=12
[2026-02-03 21:00:05] Set ATHENA_CORE_NUMBER=12
[2026-02-03 21:00:05] Starting ATLAS job with PandaID=6994404642
[2026-02-03 21:00:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/28 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-03 21:48:36]  *** The last 200 lines of the pilot log: ***
[2026-02-03 21:48:36]  is_tar=False
[2026-02-03 21:48:36]  lfn=log.48310589._006745.job.log.tgz.1
[2026-02-03 21:48:36]  mtime=0
[2026-02-03 21:48:36]  protocol_id=None
[2026-02-03 21:48:36]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-03 21:48:36]  replicas=None
[2026-02-03 21:48:36]  scope=mc23_13p6TeV
[2026-02-03 21:48:36]  status=None
[2026-02-03 21:48:36]  status_code=0
[2026-02-03 21:48:36]  storage_token=
[2026-02-03 21:48:36]  surl=/var/lib/boinc/slots/28/PanDA_Pilot-6994404642/log.48310589._006745.job.log.tgz.1
[2026-02-03 21:48:36]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/50/6e/log.48310589._006745.job.log.tgz.1
[2026-02-03 21:48:36]  workdir=None
[2026-02-03 21:48:36] ]
[2026-02-03 21:48:36] 2026-02-03 21:47:28,781 | INFO     | transferring file log.48310589._006745.job.log.tgz.1 from /var/lib/boinc/slots/28/PanDA_Pilot-6994404642/log.48310589._006745.job.log.tgz.1 to /var/lib/boinc/slots
[2026-02-03 21:48:36] 2026-02-03 21:47:28,781 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/28/PanDA_Pilot-6994404642/log.48310589._006745.job.log.tgz.1 /var/lib/boinc/slots/28/log.48310589._006745.j
[2026-02-03 21:48:36] 2026-02-03 21:47:28,805 | INFO     | adding to output.list: log.48310589._006745.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/50/6e/log.48310589._006745.job.log.tg
[2026-02-03 21:48:36] 2026-02-03 21:47:28,806 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-03 21:48:36] 2026-02-03 21:47:28,806 | INFO     | summary of transferred files:
[2026-02-03 21:48:36] 2026-02-03 21:47:28,806 | INFO     |  -- lfn=log.48310589._006745.job.log.tgz.1, status_code=0, status=transferred
[2026-02-03 21:48:36] 2026-02-03 21:47:28,807 | INFO     | stage-out finished correctly
[2026-02-03 21:48:36] 2026-02-03 21:47:29,691 | WARNING  | process 3697638 can no longer be monitored (due to stat problems) - aborting
[2026-02-03 21:48:36] 2026-02-03 21:47:29,691 | INFO     | using path: /var/lib/boinc/slots/28/PanDA_Pilot-6994404642/memory_monitor_summary.json (trf name=prmon)
[2026-02-03 21:48:36] 2026-02-03 21:47:30,329 | INFO     | number of running child processes to parent process 3697638: 1
[2026-02-03 21:48:36] 2026-02-03 21:47:30,330 | INFO     | maximum number of monitored processes: 6
[2026-02-03 21:48:36] 2026-02-03 21:47:30,556 | INFO     | time since job start (2824s) is within the limit (349056.0s)
[2026-02-03 21:48:36] 2026-02-03 21:47:31,397 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-03 21:48:36] 2026-02-03 21:47:32,233 | INFO     | job 6994404642 has state=finished
[2026-02-03 21:48:36] 2026-02-03 21:47:32,233 | INFO     | preparing for final server update for job 6994404642 in state='finished'
[2026-02-03 21:48:36] 2026-02-03 21:47:32,562 | INFO     | time since job start (2826s) is within the limit (349056.0s)
[2026-02-03 21:48:36] 2026-02-03 21:47:32,832 | INFO     | monitor loop #198: job 0:6994404642 is in state 'finished'
[2026-02-03 21:48:36] 2026-02-03 21:47:32,832 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-03 21:48:36] 2026-02-03 21:47:32,840 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-02-03 21:48:36] 2026-02-03 21:47:32,840 | INFO     | reading metadata from: /var/lib/boinc/slots/28/PanDA_Pilot-6994404642/jobReport.json
[2026-02-03 21:48:36] 2026-02-03 21:47:32,843 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/28/workernode_map.json
[2026-02-03 21:48:36] 2026-02-03 21:47:32,843 | INFO     | this job has now completed (state=finished)
[2026-02-03 21:48:36] 2026-02-03 21:47:32,843 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-03 21:48:36] 2026-02-03 21:47:32,844 | INFO     | log transfer has been attempted: DONE
[2026-02-03 21:48:36] 2026-02-03 21:47:32,844 | INFO     | job 6994404642 has finished - writing final server update
[2026-02-03 21:48:36] 2026-02-03 21:47:32,844 | INFO     | total number of processed events: 400 (read)
[2026-02-03 21:48:36] 2026-02-03 21:47:32,941 | INFO     | using path: /var/lib/boinc/slots/28/PanDA_Pilot-6994404642/memory_monitor_summary.json (trf name=prmon)
[2026-02-03 21:48:36] 2026-02-03 21:47:32,941 | INFO     | extracted standard info from prmon json
[2026-02-03 21:48:36] 2026-02-03 21:47:32,942 | INFO     | extracted standard memory fields from prmon json
[2026-02-03 21:48:36] 2026-02-03 21:47:32,942 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-03 21:48:36] 2026-02-03 21:47:32,942 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-03 21:48:36] 2026-02-03 21:47:32,942 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-03 21:48:36] 2026-02-03 21:47:32,943 | INFO     | fitting pss+swap vs Time
[2026-02-03 21:48:36] 2026-02-03 21:47:32,944 | INFO     | sum of square deviations: 18381740.0
[2026-02-03 21:48:36] 2026-02-03 21:47:32,944 | INFO     | sum of deviations: 270532072.0
[2026-02-03 21:48:36] 2026-02-03 21:47:32,944 | INFO     | mean x: 1770153915.0
[2026-02-03 21:48:36] 2026-02-03 21:47:32,944 | INFO     | mean y: 2664576.2564102565
[2026-02-03 21:48:36] 2026-02-03 21:47:32,944 | INFO     | intersect: -26049461413.11467
[2026-02-03 21:48:36] 2026-02-03 21:47:32,944 | INFO     | chi2: 0.0007183349613275658
[2026-02-03 21:48:36] 2026-02-03 21:47:32,945 | INFO     | current memory leak: 14.72 B/s (using 39 data points, chi2=0.00)
[2026-02-03 21:48:36] 2026-02-03 21:47:32,945 | INFO     | could have reported an average CPU frequency of 2345 MHz (5 samples)
[2026-02-03 21:48:36] 2026-02-03 21:47:32,945 | INFO     | ..............................
[2026-02-03 21:48:36] 2026-02-03 21:47:32,945 | INFO     | . Timing measurements:
[2026-02-03 21:48:36] 2026-02-03 21:47:32,945 | INFO     | . get job = 0 s
[2026-02-03 21:48:36] 2026-02-03 21:47:32,945 | INFO     | . initial setup = 9 s
[2026-02-03 21:48:36] 2026-02-03 21:47:32,945 | INFO     | . payload setup = 7 s
[2026-02-03 21:48:36] 2026-02-03 21:47:32,945 | INFO     | . stage-in = 0 s
[2026-02-03 21:48:36] 2026-02-03 21:47:32,946 | INFO     | . payload execution = 2799 s
[2026-02-03 21:48:36] 2026-02-03 21:47:32,946 | INFO     | . stage-out = 0 s
[2026-02-03 21:48:36] 2026-02-03 21:47:32,946 | INFO     | . log creation = 0 s
[2026-02-03 21:48:36] 2026-02-03 21:47:32,946 | INFO     | ..............................
[2026-02-03 21:48:36] 2026-02-03 21:47:33,045 | INFO     | 
[2026-02-03 21:48:36] 2026-02-03 21:47:33,045 | INFO     | job summary report
[2026-02-03 21:48:36] 2026-02-03 21:47:33,045 | INFO     | --------------------------------------------------
[2026-02-03 21:48:36] 2026-02-03 21:47:33,045 | INFO     | PanDA job id: 6994404642
[2026-02-03 21:48:36] 2026-02-03 21:47:33,045 | INFO     | task id: 48310589
[2026-02-03 21:48:36] 2026-02-03 21:47:33,046 | INFO     | errors: (none)
[2026-02-03 21:48:36] 2026-02-03 21:47:33,046 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-03 21:48:36] 2026-02-03 21:47:33,046 | INFO     | pilot state: finished 
[2026-02-03 21:48:36] 2026-02-03 21:47:33,046 | INFO     | transexitcode: 0
[2026-02-03 21:48:36] 2026-02-03 21:47:33,046 | INFO     | exeerrorcode: 0
[2026-02-03 21:48:36] 2026-02-03 21:47:33,046 | INFO     | exeerrordiag: 
[2026-02-03 21:48:36] 2026-02-03 21:47:33,046 | INFO     | exitcode: 0
[2026-02-03 21:48:36] 2026-02-03 21:47:33,046 | INFO     | exitmsg: OK
[2026-02-03 21:48:36] 2026-02-03 21:47:33,046 | INFO     | cpuconsumptiontime: 29740 s
[2026-02-03 21:48:36] 2026-02-03 21:47:33,046 | INFO     | nevents: 400
[2026-02-03 21:48:36] 2026-02-03 21:47:33,046 | INFO     | neventsw: 0
[2026-02-03 21:48:36] 2026-02-03 21:47:33,046 | INFO     | pid: 3697638
[2026-02-03 21:48:36] 2026-02-03 21:47:33,046 | INFO     | pgrp: 3697638
[2026-02-03 21:48:36] 2026-02-03 21:47:33,046 | INFO     | corecount: 12
[2026-02-03 21:48:36] 2026-02-03 21:47:33,046 | INFO     | event service: False
[2026-02-03 21:48:36] 2026-02-03 21:47:33,046 | INFO     | sizes: {0: 2278018, 1: 2278280, 11: 2278308, 2810: 2303785, 2811: 2303784, 2812: 2312840, 2814: 2313024, 2816: 2313250}
[2026-02-03 21:48:36] 2026-02-03 21:47:33,046 | INFO     | --------------------------------------------------
[2026-02-03 21:48:36] 2026-02-03 21:47:33,046 | INFO     | 
[2026-02-03 21:48:36] 2026-02-03 21:47:33,047 | INFO     | executing command: ls -lF /var/lib/boinc/slots/28
[2026-02-03 21:48:36] 2026-02-03 21:47:33,073 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-03 21:48:36] 2026-02-03 21:47:33,074 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-03 21:48:36] 2026-02-03 21:47:33,074 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-03 21:48:36] 2026-02-03 21:47:33,074 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-03 21:48:36] 2026-02-03 21:47:33,074 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-03 21:48:36] 2026-02-03 21:47:33,074 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-03 21:48:36] 2026-02-03 21:47:33,074 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-03 21:48:36] 2026-02-03 21:47:33,074 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-03 21:48:36] 2026-02-03 21:47:33,075 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-03 21:48:36] 2026-02-03 21:47:33,075 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-03 21:48:36] 2026-02-03 21:47:33,075 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-03 21:48:36] 2026-02-03 21:47:33,075 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-03 21:48:36] 2026-02-03 21:47:33,075 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-03 21:48:36] 2026-02-03 21:47:33,075 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-03 21:48:36] 2026-02-03 21:47:33,075 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-03 21:48:36] 2026-02-03 21:47:33,075 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-03 21:48:36] 2026-02-03 21:47:33,075 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-03 21:48:36] 2026-02-03 21:47:33,075 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-03 21:48:36] 2026-02-03 21:47:33,075 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-03 21:48:36] 2026-02-03 21:47:33,076 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-03 21:48:36] 2026-02-03 21:47:33,076 | INFO     | job 6994404642 has completed (purged errors)
[2026-02-03 21:48:36] 2026-02-03 21:47:33,076 | INFO     | overall cleanup function is called
[2026-02-03 21:48:36] 2026-02-03 21:47:34,084 | INFO     | --- collectZombieJob: --- 10, [3697638]
[2026-02-03 21:48:36] 2026-02-03 21:47:34,084 | INFO     | zombie collector waiting for pid 3697638
[2026-02-03 21:48:36] 2026-02-03 21:47:34,084 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-03 21:48:36] 2026-02-03 21:47:34,084 | INFO     | collected zombie processes
[2026-02-03 21:48:36] 2026-02-03 21:47:34,084 | INFO     | will attempt to kill all subprocesses of pid=3697638
[2026-02-03 21:48:36] 2026-02-03 21:47:34,736 | INFO     | process IDs to be killed: [3697638] (in reverse order)
[2026-02-03 21:48:36] 2026-02-03 21:47:34,968 | WARNING  | found no corresponding commands to process id(s)
[2026-02-03 21:48:36] 2026-02-03 21:47:34,969 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-03 21:48:36] 2026-02-03 21:47:34,997 | INFO     | did not find any defunct processes belonging to 3697638
[2026-02-03 21:48:36] 2026-02-03 21:47:35,023 | INFO     | did not find any defunct processes belonging to 3697638
[2026-02-03 21:48:36] 2026-02-03 21:47:35,023 | INFO     | ready for new job
[2026-02-03 21:48:36] 2026-02-03 21:47:35,023 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-03 21:48:36] 2026-02-03 21:47:35,026 | INFO     | **************************************
[2026-02-03 21:48:36] 2026-02-03 21:47:35,026 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-03 21:48:36] 2026-02-03 21:47:35,026 | INFO     | **************************************
[2026-02-03 21:48:36] 2026-02-03 21:47:35,026 | INFO     | 
[2026-02-03 21:48:36] 2026-02-03 21:47:35,062 | INFO     | architecture information:
[2026-02-03 21:48:36] 2026-02-03 21:47:35,063 | INFO     | executing command: cat /etc/os-release
[2026-02-03 21:48:36] 2026-02-03 21:47:35,085 | INFO     | cat /etc/os-release:
[2026-02-03 21:48:36] NAME="CentOS Linux"
[2026-02-03 21:48:36] VERSION="7 (Core)"
[2026-02-03 21:48:36] ID="centos"
[2026-02-03 21:48:36] ID_LIKE="rhel fedora"
[2026-02-03 21:48:36] VERSION_ID="7"
[2026-02-03 21:48:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-03 21:48:36] ANSI_COLOR="0;31"
[2026-02-03 21:48:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-03 21:48:36] HOME_URL="https://www.centos.org/"
[2026-02-03 21:48:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-03 21:48:36] 
[2026-02-03 21:48:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-03 21:48:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-03 21:48:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-03 21:48:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-03 21:48:36] 
[2026-02-03 21:48:36] 2026-02-03 21:47:35,085 | INFO     | **************************************
[2026-02-03 21:48:36] 2026-02-03 21:47:35,588 | INFO     | executing command: df -mP /var/lib/boinc/slots/28
[2026-02-03 21:48:36] 2026-02-03 21:47:35,609 | INFO     | sufficient remaining disk space (1696680902656 B)
[2026-02-03 21:48:36] 2026-02-03 21:47:35,609 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-03 21:48:36] 2026-02-03 21:47:35,610 | INFO     | current server update state: UPDATING_FINAL
[2026-02-03 21:48:36] 2026-02-03 21:47:35,610 | INFO     | update_server=False
[2026-02-03 21:48:36] 2026-02-03 21:47:35,610 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-03 21:48:36] 2026-02-03 21:47:36,291 | INFO     | all job control threads have been joined
[2026-02-03 21:48:36] 2026-02-03 21:47:36,340 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-03 21:48:36] 2026-02-03 21:47:36,340 | INFO     | aborting loop
[2026-02-03 21:48:36] 2026-02-03 21:47:36,385 | INFO     | all data control threads have been joined
[2026-02-03 21:48:36] 2026-02-03 21:47:36,615 | INFO     | [job] retrieve thread has finished
[2026-02-03 21:48:36] 2026-02-03 21:47:36,805 | INFO     | [job] create_data_payload thread has finished
[2026-02-03 21:48:36] 2026-02-03 21:47:36,892 | INFO     | all payload control threads have been joined
[2026-02-03 21:48:36] 2026-02-03 21:47:36,894 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-03 21:48:36] 2026-02-03 21:47:36,944 | INFO     | [payload] validate_post thread has finished
[2026-02-03 21:48:36] 2026-02-03 21:47:37,100 | INFO     | [payload] validate_pre thread has finished
[2026-02-03 21:48:36] 2026-02-03 21:47:37,294 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-03 21:48:36] 2026-02-03 21:47:37,296 | INFO     | [job] control thread has finished
[2026-02-03 21:48:36] 2026-02-03 21:47:37,344 | INFO     | [job] job monitor thread has finished
[2026-02-03 21:48:36] 2026-02-03 21:47:37,356 | INFO     | [data] copytool_in thread has finished
[2026-02-03 21:48:36] 2026-02-03 21:47:37,388 | INFO     | [data] control thread has finished
[2026-02-03 21:48:36] 2026-02-03 21:47:37,500 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-03 21:48:36] 2026-02-03 21:47:37,543 | INFO     | [payload] failed_post thread has finished
[2026-02-03 21:48:36] 2026-02-03 21:47:37,876 | INFO     | [payload] execute_payloads thread has finished
[2026-02-03 21:48:36] 2026-02-03 21:47:37,897 | INFO     | [payload] control thread has finished
[2026-02-03 21:48:36] 2026-02-03 21:47:38,052 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-03 21:48:36] 2026-02-03 21:47:38,117 | INFO     | [job] validate thread has finished
[2026-02-03 21:48:36] 2026-02-03 21:47:38,896 | INFO     | [data] copytool_out thread has finished
[2026-02-03 21:48:36] 2026-02-03 21:47:39,060 | INFO     | [job] queue monitor thread has finished
[2026-02-03 21:48:36] 2026-02-03 21:47:41,506 | INFO     | [data] queue_monitor thread has finished
[2026-02-03 21:48:36] 2026-02-03 21:48:06,313 | INFO     | PID=3692039 has CPU usage=11.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-03 21:48:36] 2026-02-03 21:48:06,314 | INFO     | .. there are 14 such processes running
[2026-02-03 21:48:36] 2026-02-03 21:48:06,314 | INFO     | found 0 job(s) in 20 queues
[2026-02-03 21:48:36] 2026-02-03 21:48:06,315 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-03 21:48:36] 2026-02-03 21:48:06,315 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-03 21:48:36] 2026-02-03 21:48:29,624 | INFO     | [monitor] cgroup control has ended
[2026-02-03 21:48:36] 2026-02-03 21:48:31,174 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139864634033984)>', '<ExcThread(monitor, started 139863923877632)>']
[2026-02-03 21:48:36] 2026-02-03 21:48:31,417 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-03 21:48:36] 2026-02-03 21:48:31,417 | INFO     | [monitor] control thread has ended
[2026-02-03 21:48:36] 2026-02-03 21:48:36,196 | INFO     | all workflow threads have been joined
[2026-02-03 21:48:36] 2026-02-03 21:48:36,196 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-03 21:48:36] 2026-02-03 21:48:36,196 | INFO     | traces error code: 0
[2026-02-03 21:48:36] 2026-02-03 21:48:36,197 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-03 21:48:36] 2026-02-03 21:48:36,391 [wrapper] ==== pilot stdout END ====
[2026-02-03 21:48:36] 2026-02-03 21:48:36,394 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-03 21:48:36] 2026-02-03 21:48:36,397 [wrapper] pilotpid: 3692039
[2026-02-03 21:48:36] 2026-02-03 21:48:36,399 [wrapper] Pilot exit status: 0
[2026-02-03 21:48:36] 2026-02-03 21:48:36,409 [wrapper] pandaids: 6994404642
[2026-02-03 21:48:36] 2026-02-03 21:48:36,537 [wrapper] cleanup supervisor_pilot 3801816 3692040
[2026-02-03 21:48:36] 2026-02-03 21:48:36,540 [wrapper] Test setup, not cleaning
[2026-02-03 21:48:36] 2026-02-03 21:48:36,542 [wrapper] apfmon messages muted
[2026-02-03 21:48:36] 2026-02-03 21:48:36,545 [wrapper] ==== wrapper stdout END ====
[2026-02-03 21:48:36] 2026-02-03 21:48:36,547 [wrapper] ==== wrapper stderr END ====
[2026-02-03 21:48:36]  *** Error codes and diagnostics ***
[2026-02-03 21:48:36]     "exeErrorCode": 0,
[2026-02-03 21:48:36]     "exeErrorDiag": "",
[2026-02-03 21:48:36]     "pilotErrorCode": 0,
[2026-02-03 21:48:36]     "pilotErrorDiag": "",
[2026-02-03 21:48:36]  *** Listing of results directory ***
[2026-02-03 21:48:36] total 668064
[2026-02-03 21:48:36] -rw-r--r-- 1 boinc boinc    584422 Jan 31 04:35 pilot3.tar.gz
[2026-02-03 21:48:36] -rwx------ 1 boinc boinc     36322 Jan 31 05:30 runpilot2-wrapper.sh
[2026-02-03 21:48:36] -rw-r--r-- 1 boinc boinc      5111 Jan 31 05:30 queuedata.json
[2026-02-03 21:48:36] -rw-r--r-- 1 boinc boinc       100 Feb  3 21:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-03 21:48:36] -rwxr-xr-x 1 boinc boinc      7986 Feb  3 21:00 run_atlas
[2026-02-03 21:48:36] -rw-r--r-- 1 boinc boinc       105 Feb  3 21:00 job.xml
[2026-02-03 21:48:36] -rw-r--r-- 2 boinc boinc 495195321 Feb  3 21:00 EVNT.48310585._000128.pool.root.1
[2026-02-03 21:48:36] -rw-r--r-- 2 boinc boinc     15845 Feb  3 21:00 start_atlas.sh
[2026-02-03 21:48:36] drwxrwx--x 2 boinc boinc      4096 Feb  3 21:00 shared
[2026-02-03 21:48:36] -rw-r--r-- 2 boinc boinc    597764 Feb  3 21:00 input.tar.gz
[2026-02-03 21:48:36] -rw-r--r-- 1 boinc boinc      9417 Feb  3 21:00 init_data.xml
[2026-02-03 21:48:36] -rw-r--r-- 1 boinc boinc         0 Feb  3 21:00 boinc_setup_complete
[2026-02-03 21:48:36] -rw-r--r-- 1 boinc boinc         0 Feb  3 21:00 boinc_lockfile
[2026-02-03 21:48:36] -rw-r--r-- 1 boinc boinc      2529 Feb  3 21:00 pandaJob.out
[2026-02-03 21:48:36] -rw------- 1 boinc boinc   1009252 Feb  3 21:00 agis_schedconf.cvmfs.json
[2026-02-03 21:48:36] -rw------- 1 boinc boinc   1511668 Feb  3 21:00 agis_ddmendpoints.agis.ALL.json
[2026-02-03 21:48:36] -rw------- 1 boinc boinc       421 Feb  3 21:00 workernode_map.json
[2026-02-03 21:48:36] drwx------ 5 boinc boinc      4096 Feb  3 21:00 pilot3
[2026-02-03 21:48:36] -rw------- 1 boinc boinc 183345516 Feb  3 21:46 HITS.48310589._006745.pool.root.1
[2026-02-03 21:48:36] -rw-r--r-- 1 boinc boinc       531 Feb  3 21:47 boinc_task_state.xml
[2026-02-03 21:48:36] -rw------- 1 boinc boinc      1028 Feb  3 21:47 memory_monitor_summary.json
[2026-02-03 21:48:36] -rw------- 1 boinc boinc    381561 Feb  3 21:47 log.48310589._006745.job.log.tgz.1
[2026-02-03 21:48:36] -rw------- 1 boinc boinc      6288 Feb  3 21:47 heartbeat.json
[2026-02-03 21:48:36] -rw------- 1 boinc boinc        95 Feb  3 21:48 pilot_heartbeat.json
[2026-02-03 21:48:36] -rw-r--r-- 1 boinc boinc        27 Feb  3 21:48 wrapper_checkpoint.txt
[2026-02-03 21:48:36] -rw-r--r-- 1 boinc boinc      8192 Feb  3 21:48 boinc_mmap_file
[2026-02-03 21:48:36] -rw------- 1 boinc boinc      4824 Feb  3 21:48 pilotlog.txt
[2026-02-03 21:48:36] -rw------- 1 boinc boinc    424723 Feb  3 21:48 log.48310589._006745.job.log.1
[2026-02-03 21:48:36] -rw------- 1 boinc boinc       357 Feb  3 21:48 output.list
[2026-02-03 21:48:36] -rw-r--r-- 1 boinc boinc       620 Feb  3 21:48 runtime_log
[2026-02-03 21:48:36] -rw------- 1 boinc boinc    819200 Feb  3 21:48 result.tar.gz
[2026-02-03 21:48:36] -rw-r--r-- 1 boinc boinc      8787 Feb  3 21:48 runtime_log.err
[2026-02-03 21:48:36] -rw------- 1 boinc boinc       643 Feb  3 21:48 cKPNDmejI68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmZENKDmFkyfJo.diag
[2026-02-03 21:48:36] -rw-r--r-- 1 boinc boinc     21337 Feb  3 21:48 stderr.txt
[2026-02-03 21:48:36] HITS file was successfully produced:
[2026-02-03 21:48:36] -rw------- 1 boinc boinc 183345516 Feb  3 21:46 shared/HITS.pool.root.1
[2026-02-03 21:48:36]  *** Contents of shared directory: ***
[2026-02-03 21:48:36] total 664052
[2026-02-03 21:48:36] -rw-r--r-- 2 boinc boinc 495195321 Feb  3 21:00 ATLAS.root_0
[2026-02-03 21:48:36] -rw-r--r-- 2 boinc boinc     15845 Feb  3 21:00 start_atlas.sh
[2026-02-03 21:48:36] -rw-r--r-- 2 boinc boinc    597764 Feb  3 21:00 input.tar.gz
[2026-02-03 21:48:36] -rw------- 1 boinc boinc 183345516 Feb  3 21:46 HITS.pool.root.1
[2026-02-03 21:48:36] -rw------- 1 boinc boinc    819200 Feb  3 21:48 result.tar.gz
21:48:38 (3687304): run_atlas exited; CPU time 29920.564827
21:48:38 (3687304): called boinc_finish(0)

</stderr_txt>
]]>

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