Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:57:05 (3932611): wrapper (7.7.26015): starting
08:57:05 (3932611): wrapper: running run_atlas (--nthreads 6)
[2026-02-04 08:57:05] Arguments: --nthreads 6
[2026-02-04 08:57:05] Threads: 6
[2026-02-04 08:57:05] Checking for CVMFS
[2026-02-04 08:57:05] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-04 08:57:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-04 08:57:29] Running cvmfs_config stat atlas.cern.ch
[2026-02-04 08:57:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-04 08:57:30] 2.13.3.0 3793838 1002 64160 155848 2 50 15030752 20971521 929 130560 0 463802 99.981 38388 15 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-02-04 08:57:30] CVMFS is ok
[2026-02-04 08:57:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 08:57:30] Checking for apptainer binary...
[2026-02-04 08:57:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-04 08:57:30] Running /usr/bin/apptainer --version
[2026-02-04 08:57:30] apptainer version 1.4.5-2.el9
[2026-02-04 08:57:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 08:57:30] testio005
[2026-02-04 08:57:30] apptainer works
[2026-02-04 08:57:30] Set ATHENA_PROC_NUMBER=6
[2026-02-04 08:57:30] Set ATHENA_CORE_NUMBER=6
[2026-02-04 08:57:30] Starting ATLAS job with PandaID=6994197002
[2026-02-04 08:57:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 10:41:05]  *** The last 200 lines of the pilot log: ***
[2026-02-04 10:41:05] 2026-02-04 01:40:14,879 | INFO     | total number of processed events: 400 (read)
[2026-02-04 10:41:05] 2026-02-04 01:40:14,882 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6994197002/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 10:41:05] 2026-02-04 01:40:14,882 | INFO     | extracted standard info from prmon json
[2026-02-04 10:41:05] 2026-02-04 01:40:14,882 | INFO     | extracted standard memory fields from prmon json
[2026-02-04 10:41:05] 2026-02-04 01:40:14,883 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-04 10:41:05] 2026-02-04 01:40:14,883 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-04 10:41:05] 2026-02-04 01:40:14,883 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-04 10:41:05] 2026-02-04 01:40:14,885 | INFO     | fitting pss+swap vs Time
[2026-02-04 10:41:05] 2026-02-04 01:40:14,885 | INFO     | sum of square deviations: 310052325.0
[2026-02-04 10:41:05] 2026-02-04 01:40:14,885 | INFO     | sum of deviations: -821725662.499999
[2026-02-04 10:41:05] 2026-02-04 01:40:14,885 | INFO     | mean x: 1770166171.5
[2026-02-04 10:41:05] 2026-02-04 01:40:14,885 | INFO     | mean y: 2448502.17
[2026-02-04 10:41:05] 2026-02-04 01:40:14,886 | INFO     | intersect: 4693885568.513316
[2026-02-04 10:41:05] 2026-02-04 01:40:14,886 | INFO     | chi2: 2.452532767749648
[2026-02-04 10:41:05] 2026-02-04 01:40:14,886 | INFO     | sum of square deviations: 265828240.0
[2026-02-04 10:41:05] 2026-02-04 01:40:14,886 | INFO     | sum of deviations: 5192373802.000002
[2026-02-04 10:41:05] 2026-02-04 01:40:14,886 | INFO     | mean x: 1770166019.0
[2026-02-04 10:41:05] 2026-02-04 01:40:14,887 | INFO     | mean y: 2468395.305263158
[2026-02-04 10:41:05] 2026-02-04 01:40:14,887 | INFO     | intersect: -34573856762.04536
[2026-02-04 10:41:05] 2026-02-04 01:40:14,887 | INFO     | chi2: 1.8043299139010893
[2026-02-04 10:41:05] 2026-02-04 01:40:14,887 | INFO     | current chi2=1.8043299139010893 (change=26.42993652816004 %)
[2026-02-04 10:41:05] 2026-02-04 01:40:14,887 | INFO     | sum of square deviations: 226022842.5
[2026-02-04 10:41:05] 2026-02-04 01:40:14,887 | INFO     | sum of deviations: 5014503108.999999
[2026-02-04 10:41:05] 2026-02-04 01:40:14,888 | INFO     | mean x: 1770165866.5
[2026-02-04 10:41:05] 2026-02-04 01:40:14,888 | INFO     | mean y: 2467713.222222222
[2026-02-04 10:41:05] 2026-02-04 01:40:14,888 | INFO     | intersect: -39270121476.56255
[2026-02-04 10:41:05] 2026-02-04 01:40:14,888 | INFO     | chi2: 1.8090878626625322
[2026-02-04 10:41:05] 2026-02-04 01:40:14,888 | INFO     | current chi2=1.8090878626625322 (change=-0.26369616358883297 %)
[2026-02-04 10:41:05] 2026-02-04 01:40:14,888 | INFO     | right removable region: 89
[2026-02-04 10:41:05] 2026-02-04 01:40:14,888 | INFO     | sum of square deviations: 265828240.0
[2026-02-04 10:41:05] 2026-02-04 01:40:14,889 | INFO     | sum of deviations: -16224954826.0
[2026-02-04 10:41:05] 2026-02-04 01:40:14,889 | INFO     | mean x: 1770166324.0
[2026-02-04 10:41:05] 2026-02-04 01:40:14,889 | INFO     | mean y: 2500409.1578947366
[2026-02-04 10:41:05] 2026-02-04 01:40:14,889 | INFO     | intersect: 108045455670.06802
[2026-02-04 10:41:05] 2026-02-04 01:40:14,889 | INFO     | chi2: 0.8600646824367003
[2026-02-04 10:41:05] 2026-02-04 01:40:14,889 | INFO     | current chi2=0.8600646824367003 (change=64.93157222009867 %)
[2026-02-04 10:41:05] 2026-02-04 01:40:14,889 | INFO     | sum of square deviations: 226022842.5
[2026-02-04 10:41:05] 2026-02-04 01:40:14,890 | INFO     | sum of deviations: -11715791943.0
[2026-02-04 10:41:05] 2026-02-04 01:40:14,890 | INFO     | mean x: 1770166476.5
[2026-02-04 10:41:05] 2026-02-04 01:40:14,890 | INFO     | mean y: 2483086.8666666667
[2026-02-04 10:41:05] 2026-02-04 01:40:14,890 | INFO     | intersect: 91758262784.87396
[2026-02-04 10:41:05] 2026-02-04 01:40:14,890 | INFO     | chi2: 0.833430988053773
[2026-02-04 10:41:05] 2026-02-04 01:40:14,890 | INFO     | current chi2=0.833430988053773 (change=3.0967082972724547 %)
[2026-02-04 10:41:05] 2026-02-04 01:40:14,890 | INFO     | left removable region: 20
[2026-02-04 10:41:05] 2026-02-04 01:40:14,890 | INFO     | sum of square deviations: 101843770.0
[2026-02-04 10:41:05] 2026-02-04 01:40:14,891 | INFO     | sum of deviations: 1102284518.0
[2026-02-04 10:41:05] 2026-02-04 01:40:14,891 | INFO     | mean x: 1770166446.0
[2026-02-04 10:41:05] 2026-02-04 01:40:14,891 | INFO     | mean y: 2471490.1014492754
[2026-02-04 10:41:05] 2026-02-04 01:40:14,891 | INFO     | intersect: -19156550880.229923
[2026-02-04 10:41:05] 2026-02-04 01:40:14,891 | INFO     | chi2: 0.000998079648716632
[2026-02-04 10:41:05] 2026-02-04 01:40:14,891 | INFO     | current memory leak: 10.82 B/s (using 69 data points, chi2=0.00)
[2026-02-04 10:41:05] 2026-02-04 01:40:14,892 | INFO     | could have reported an average CPU frequency of 3329 MHz (7 samples)
[2026-02-04 10:41:05] 2026-02-04 01:40:14,892 | INFO     | ..............................
[2026-02-04 10:41:05] 2026-02-04 01:40:14,892 | INFO     | . Timing measurements:
[2026-02-04 10:41:05] 2026-02-04 01:40:14,892 | INFO     | . get job = 0 s
[2026-02-04 10:41:05] 2026-02-04 01:40:14,892 | INFO     | . initial setup = 11 s
[2026-02-04 10:41:05] 2026-02-04 01:40:14,892 | INFO     | . payload setup = 5 s
[2026-02-04 10:41:05] 2026-02-04 01:40:14,892 | INFO     | . stage-in = 0 s
[2026-02-04 10:41:05] 2026-02-04 01:40:14,892 | INFO     | . payload execution = 6061 s
[2026-02-04 10:41:05] 2026-02-04 01:40:14,892 | INFO     | . stage-out = 0 s
[2026-02-04 10:41:05] 2026-02-04 01:40:14,892 | INFO     | . log creation = 0 s
[2026-02-04 10:41:05] 2026-02-04 01:40:14,892 | INFO     | ..............................
[2026-02-04 10:41:05] 2026-02-04 01:40:14,968 | INFO     | 
[2026-02-04 10:41:05] 2026-02-04 01:40:14,968 | INFO     | time since job start (6084s) is within the limit (349056.0s)
[2026-02-04 10:41:05] 2026-02-04 01:40:14,969 | INFO     | job summary report
[2026-02-04 10:41:05] 2026-02-04 01:40:14,969 | INFO     | --------------------------------------------------
[2026-02-04 10:41:05] 2026-02-04 01:40:14,969 | INFO     | PanDA job id: 6994197002
[2026-02-04 10:41:05] 2026-02-04 01:40:14,969 | INFO     | task id: 48442098
[2026-02-04 10:41:05] 2026-02-04 01:40:14,969 | INFO     | errors: (none)
[2026-02-04 10:41:05] 2026-02-04 01:40:14,969 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 10:41:05] 2026-02-04 01:40:14,969 | INFO     | pilot state: finished 
[2026-02-04 10:41:05] 2026-02-04 01:40:14,969 | INFO     | transexitcode: 0
[2026-02-04 10:41:05] 2026-02-04 01:40:14,969 | INFO     | exeerrorcode: 0
[2026-02-04 10:41:05] 2026-02-04 01:40:14,969 | INFO     | exeerrordiag: 
[2026-02-04 10:41:05] 2026-02-04 01:40:14,970 | INFO     | exitcode: 0
[2026-02-04 10:41:05] 2026-02-04 01:40:14,970 | INFO     | exitmsg: OK
[2026-02-04 10:41:05] 2026-02-04 01:40:14,970 | INFO     | cpuconsumptiontime: 33739 s
[2026-02-04 10:41:05] 2026-02-04 01:40:14,970 | INFO     | nevents: 400
[2026-02-04 10:41:05] 2026-02-04 01:40:14,970 | INFO     | neventsw: 0
[2026-02-04 10:41:05] 2026-02-04 01:40:14,970 | INFO     | pid: 3941330
[2026-02-04 10:41:05] 2026-02-04 01:40:14,970 | INFO     | pgrp: 3941330
[2026-02-04 10:41:05] 2026-02-04 01:40:14,970 | INFO     | corecount: 6
[2026-02-04 10:41:05] 2026-02-04 01:40:14,970 | INFO     | event service: False
[2026-02-04 10:41:05] 2026-02-04 01:40:14,970 | INFO     | sizes: {0: 2278066, 1: 2278272, 11: 2278300, 6070: 2305192, 6071: 2314190, 6072: 2314246, 6074: 2314568}
[2026-02-04 10:41:05] 2026-02-04 01:40:14,970 | INFO     | --------------------------------------------------
[2026-02-04 10:41:05] 2026-02-04 01:40:14,970 | INFO     | 
[2026-02-04 10:41:05] 2026-02-04 01:40:14,970 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-02-04 10:41:05] 2026-02-04 01:40:14,987 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 10:41:05] 2026-02-04 01:40:14,988 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 10:41:05] 2026-02-04 01:40:14,988 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 10:41:05] 2026-02-04 01:40:14,988 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 10:41:05] 2026-02-04 01:40:14,988 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 10:41:05] 2026-02-04 01:40:14,988 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 10:41:05] 2026-02-04 01:40:14,988 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 10:41:05] 2026-02-04 01:40:14,988 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 10:41:05] 2026-02-04 01:40:14,988 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 10:41:05] 2026-02-04 01:40:14,988 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 10:41:05] 2026-02-04 01:40:14,988 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 10:41:05] 2026-02-04 01:40:14,989 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 10:41:05] 2026-02-04 01:40:14,989 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 10:41:05] 2026-02-04 01:40:14,989 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 10:41:05] 2026-02-04 01:40:14,989 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 10:41:05] 2026-02-04 01:40:14,989 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 10:41:05] 2026-02-04 01:40:14,989 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 10:41:05] 2026-02-04 01:40:14,989 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 10:41:05] 2026-02-04 01:40:14,989 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 10:41:05] 2026-02-04 01:40:14,989 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 10:41:05] 2026-02-04 01:40:14,989 | INFO     | job 6994197002 has completed (purged errors)
[2026-02-04 10:41:05] 2026-02-04 01:40:14,989 | INFO     | overall cleanup function is called
[2026-02-04 10:41:05] 2026-02-04 01:40:15,996 | INFO     | --- collectZombieJob: --- 10, [3941330]
[2026-02-04 10:41:05] 2026-02-04 01:40:15,996 | INFO     | zombie collector waiting for pid 3941330
[2026-02-04 10:41:05] 2026-02-04 01:40:15,996 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 10:41:05] 2026-02-04 01:40:15,996 | INFO     | collected zombie processes
[2026-02-04 10:41:05] 2026-02-04 01:40:15,996 | INFO     | will attempt to kill all subprocesses of pid=3941330
[2026-02-04 10:41:05] 2026-02-04 01:40:16,085 | INFO     | process IDs to be killed: [3941330] (in reverse order)
[2026-02-04 10:41:05] 2026-02-04 01:40:16,122 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 10:41:05] 2026-02-04 01:40:16,122 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 10:41:05] 2026-02-04 01:40:16,125 | INFO     | did not find any defunct processes belonging to 3941330
[2026-02-04 10:41:05] 2026-02-04 01:40:16,128 | INFO     | did not find any defunct processes belonging to 3941330
[2026-02-04 10:41:05] 2026-02-04 01:40:16,128 | INFO     | ready for new job
[2026-02-04 10:41:05] 2026-02-04 01:40:16,128 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 10:41:05] 2026-02-04 01:40:16,129 | INFO     | **************************************
[2026-02-04 10:41:05] 2026-02-04 01:40:16,130 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 10:41:05] 2026-02-04 01:40:16,130 | INFO     | **************************************
[2026-02-04 10:41:05] 2026-02-04 01:40:16,130 | INFO     | 
[2026-02-04 10:41:05] 2026-02-04 01:40:16,131 | INFO     | architecture information:
[2026-02-04 10:41:05] 2026-02-04 01:40:16,131 | INFO     | executing command: cat /etc/os-release
[2026-02-04 10:41:05] 2026-02-04 01:40:16,144 | INFO     | cat /etc/os-release:
[2026-02-04 10:41:05] NAME="CentOS Linux"
[2026-02-04 10:41:05] VERSION="7 (Core)"
[2026-02-04 10:41:05] ID="centos"
[2026-02-04 10:41:05] ID_LIKE="rhel fedora"
[2026-02-04 10:41:05] VERSION_ID="7"
[2026-02-04 10:41:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 10:41:05] ANSI_COLOR="0;31"
[2026-02-04 10:41:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 10:41:05] HOME_URL="https://www.centos.org/"
[2026-02-04 10:41:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 10:41:05] 
[2026-02-04 10:41:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 10:41:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 10:41:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 10:41:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 10:41:05] 
[2026-02-04 10:41:05] 2026-02-04 01:40:16,144 | INFO     | **************************************
[2026-02-04 10:41:05] 2026-02-04 01:40:16,647 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-02-04 10:41:05] 2026-02-04 01:40:16,664 | INFO     | sufficient remaining disk space (93249863680 B)
[2026-02-04 10:41:05] 2026-02-04 01:40:16,664 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 10:41:05] 2026-02-04 01:40:16,665 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 10:41:05] 2026-02-04 01:40:16,665 | INFO     | update_server=False
[2026-02-04 10:41:05] 2026-02-04 01:40:16,665 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 10:41:05] 2026-02-04 01:40:16,665 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-02-04 10:41:05] 2026-02-04 01:40:16,665 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 10:41:05] 2026-02-04 01:40:16,665 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 10:41:05] 2026-02-04 01:40:16,666 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 10:41:05] 2026-02-04 01:40:16,666 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 10:41:05] 2026-02-04 01:40:17,022 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-04 10:41:05] 2026-02-04 01:40:17,022 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-04 10:41:05] 2026-02-04 01:40:17,022 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 10:41:05] 2026-02-04 01:40:17,022 | INFO     | will abort loop
[2026-02-04 10:41:05] 2026-02-04 01:40:17,536 | INFO     | all payload control threads have been joined
[2026-02-04 10:41:05] 2026-02-04 01:40:17,664 | INFO     | all data control threads have been joined
[2026-02-04 10:41:05] 2026-02-04 01:40:17,670 | INFO     | [job] retrieve thread has finished
[2026-02-04 10:41:05] 2026-02-04 01:40:17,671 | INFO     | [job] queue monitor thread has finished
[2026-02-04 10:41:05] 2026-02-04 01:40:18,027 | INFO     | [job] job monitor thread has finished
[2026-02-04 10:41:05] 2026-02-04 01:40:18,114 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 10:41:05] 2026-02-04 01:40:18,137 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 10:41:05] 2026-02-04 01:40:18,157 | INFO     | all job control threads have been joined
[2026-02-04 10:41:05] 2026-02-04 01:40:18,192 | INFO     | job.realtimelogging is not enabled
[2026-02-04 10:41:05] 2026-02-04 01:40:18,255 | INFO     | [job] validate thread has finished
[2026-02-04 10:41:05] 2026-02-04 01:40:18,511 | INFO     | [data] copytool_in thread has finished
[2026-02-04 10:41:05] 2026-02-04 01:40:18,541 | INFO     | [payload] control thread has finished
[2026-02-04 10:41:05] 2026-02-04 01:40:18,667 | INFO     | [payload] failed_post thread has finished
[2026-02-04 10:41:05] 2026-02-04 01:40:18,670 | INFO     | [data] control thread has finished
[2026-02-04 10:41:05] 2026-02-04 01:40:18,715 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 10:41:05] 2026-02-04 01:40:19,035 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 10:41:05] 2026-02-04 01:40:19,162 | INFO     | [job] control thread has finished
[2026-02-04 10:41:05] 2026-02-04 01:40:19,179 | INFO     | [payload] validate_post thread has finished
[2026-02-04 10:41:05] 2026-02-04 01:40:19,197 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 10:41:05] 2026-02-04 01:40:19,493 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 10:41:05] 2026-02-04 01:40:20,142 | INFO     | [data] copytool_out thread has finished
[2026-02-04 10:41:05] 2026-02-04 01:40:23,498 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 10:41:05] 2026-02-04 01:40:59,881 | INFO     | [monitor] cgroup control has ended
[2026-02-04 10:41:05] 2026-02-04 01:41:00,344 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140543627155264)>', '<ExcThread(monitor, started 140543275300608)>']
[2026-02-04 10:41:05] 2026-02-04 01:41:00,881 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 10:41:05] 2026-02-04 01:41:00,881 | INFO     | [monitor] control thread has ended
[2026-02-04 10:41:05] 2026-02-04 01:41:05,369 | INFO     | all workflow threads have been joined
[2026-02-04 10:41:05] 2026-02-04 01:41:05,369 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 10:41:05] 2026-02-04 01:41:05,369 | INFO     | traces error code: 0
[2026-02-04 10:41:05] 2026-02-04 01:41:05,369 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 10:41:05] 2026-02-04 01:41:05,467 [wrapper] ==== pilot stdout END ====
[2026-02-04 10:41:05] 2026-02-04 01:41:05,469 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 10:41:05] 2026-02-04 01:41:05,473 [wrapper] pilotpid: 3936741
[2026-02-04 10:41:05] 2026-02-04 01:41:05,476 [wrapper] Pilot exit status: 0
[2026-02-04 10:41:05] 2026-02-04 01:41:05,490 [wrapper] pandaids: 6994197002
[2026-02-04 10:41:05] 2026-02-04 01:41:05,526 [wrapper] cleanup supervisor_pilot 3946485 3936742
[2026-02-04 10:41:05] 2026-02-04 01:41:05,528 [wrapper] Test setup, not cleaning
[2026-02-04 10:41:05] 2026-02-04 01:41:05,532 [wrapper] apfmon messages muted
[2026-02-04 10:41:05] 2026-02-04 01:41:05,534 [wrapper] ==== wrapper stdout END ====
[2026-02-04 10:41:05] 2026-02-04 01:41:05,536 [wrapper] ==== wrapper stderr END ====
[2026-02-04 10:41:05]  *** Error codes and diagnostics ***
[2026-02-04 10:41:05]     "exeErrorCode": 0,
[2026-02-04 10:41:05]     "exeErrorDiag": "",
[2026-02-04 10:41:05]     "pilotErrorCode": 0,
[2026-02-04 10:41:05]     "pilotErrorDiag": "",
[2026-02-04 10:41:05]  *** Listing of results directory ***
[2026-02-04 10:41:05] total 670424
[2026-02-04 10:41:05] -rw-r--r--. 1 boinc boinc    584422 Feb  4 00:10 pilot3.tar.gz
[2026-02-04 10:41:05] -rwx------. 1 boinc boinc     36322 Feb  4 00:11 runpilot2-wrapper.sh
[2026-02-04 10:41:05] -rw-r--r--. 1 boinc boinc      5111 Feb  4 00:12 queuedata.json
[2026-02-04 10:41:05] -rw-r--r--. 1 boinc boinc       100 Feb  4 08:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 10:41:05] -rwxr-xr-x. 1 boinc boinc      7986 Feb  4 08:57 run_atlas
[2026-02-04 10:41:05] -rw-r--r--. 1 boinc boinc       105 Feb  4 08:57 job.xml
[2026-02-04 10:41:05] -rw-r--r--. 1 boinc boinc      9356 Feb  4 08:57 init_data.xml
[2026-02-04 10:41:05] -rw-r--r--. 2 boinc boinc 499910643 Feb  4 08:57 EVNT.48442096._000019.pool.root.1
[2026-02-04 10:41:05] -rw-r--r--. 2 boinc boinc     15845 Feb  4 08:57 start_atlas.sh
[2026-02-04 10:41:05] drwxrwx--x. 2 boinc boinc        68 Feb  4 08:57 shared
[2026-02-04 10:41:05] -rw-r--r--. 2 boinc boinc    597757 Feb  4 08:57 input.tar.gz
[2026-02-04 10:41:05] -rw-r--r--. 1 boinc boinc         0 Feb  4 08:57 boinc_lockfile
[2026-02-04 10:41:05] -rw-r--r--. 1 boinc boinc      2526 Feb  4 08:57 pandaJob.out
[2026-02-04 10:41:05] -rw-------. 1 boinc boinc   1009236 Feb  4 08:58 agis_schedconf.cvmfs.json
[2026-02-04 10:41:05] -rw-------. 1 boinc boinc   1511668 Feb  4 08:58 agis_ddmendpoints.agis.ALL.json
[2026-02-04 10:41:05] -rw-------. 1 boinc boinc       424 Feb  4 08:58 workernode_map.json
[2026-02-04 10:41:05] drwx------. 5 boinc boinc      4096 Feb  4 08:58 pilot3
[2026-02-04 10:41:05] -rw-------. 1 boinc boinc        95 Feb  4 10:39 pilot_heartbeat.json
[2026-02-04 10:41:05] -rw-------. 1 boinc boinc 180228337 Feb  4 10:39 HITS.48442098._000925.pool.root.1
[2026-02-04 10:41:05] -rw-r--r--. 1 boinc boinc       530 Feb  4 10:40 boinc_task_state.xml
[2026-02-04 10:41:05] -rw-------. 1 boinc boinc      1014 Feb  4 10:40 memory_monitor_summary.json
[2026-02-04 10:41:05] -rw-------. 1 boinc boinc    329236 Feb  4 10:40 log.48442098._000925.job.log.tgz.1
[2026-02-04 10:41:05] -rw-------. 1 boinc boinc      6293 Feb  4 10:40 heartbeat.json
[2026-02-04 10:41:05] -rw-r--r--. 1 boinc boinc      8192 Feb  4 10:41 boinc_mmap_file
[2026-02-04 10:41:05] -rw-r--r--. 1 boinc boinc        27 Feb  4 10:41 wrapper_checkpoint.txt
[2026-02-04 10:41:05] -rw-------. 1 boinc boinc      4806 Feb  4 10:41 pilotlog.txt
[2026-02-04 10:41:05] -rw-------. 1 boinc boinc    889229 Feb  4 10:41 log.48442098._000925.job.log.1
[2026-02-04 10:41:05] -rw-------. 1 boinc boinc       357 Feb  4 10:41 output.list
[2026-02-04 10:41:05] -rw-r--r--. 1 boinc boinc       620 Feb  4 10:41 runtime_log
[2026-02-04 10:41:05] -rw-------. 1 boinc boinc   1239040 Feb  4 10:41 result.tar.gz
[2026-02-04 10:41:05] -rw-r--r--. 1 boinc boinc      8774 Feb  4 10:41 runtime_log.err
[2026-02-04 10:41:05] -rw-------. 1 boinc boinc       642 Feb  4 10:41 7PpKDmoEX78n9Rq4apOajLDm4fhM0noT9bVooX4SDm8rUKDmj3TOkn.diag
[2026-02-04 10:41:05] -rw-r--r--. 1 boinc boinc     20641 Feb  4 10:41 stderr.txt
[2026-02-04 10:41:05] HITS file was successfully produced:
[2026-02-04 10:41:05] -rw-------. 1 boinc boinc 180228337 Feb  4 10:39 shared/HITS.pool.root.1
[2026-02-04 10:41:05]  *** Contents of shared directory: ***
[2026-02-04 10:41:05] total 666016
[2026-02-04 10:41:05] -rw-r--r--. 2 boinc boinc 499910643 Feb  4 08:57 ATLAS.root_0
[2026-02-04 10:41:05] -rw-r--r--. 2 boinc boinc     15845 Feb  4 08:57 start_atlas.sh
[2026-02-04 10:41:05] -rw-r--r--. 2 boinc boinc    597757 Feb  4 08:57 input.tar.gz
[2026-02-04 10:41:05] -rw-------. 1 boinc boinc 180228337 Feb  4 10:39 HITS.pool.root.1
[2026-02-04 10:41:05] -rw-------. 1 boinc boinc   1239040 Feb  4 10:41 result.tar.gz
10:41:06 (3932611): run_atlas exited; CPU time 33804.933373
10:41:06 (3932611): called boinc_finish(0)

</stderr_txt>
]]>

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