Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:32:31 (27490): wrapper (7.7.26015): starting
09:32:31 (27490): wrapper: running run_atlas (--nthreads 8)
[2026-02-04 09:32:31] Arguments: --nthreads 8
[2026-02-04 09:32:31] Threads: 8
[2026-02-04 09:32:31] Checking for CVMFS
[2026-02-04 09:32:31] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-04 09:32:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-04 09:32:34] Running cvmfs_config stat atlas.cern.ch
[2026-02-04 09:32:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-04 09:32:35] 2.11.2.0 32469 72619 104652 155861 1 90 19787168 25165824 4313 130560 0 25960638 99.733 28563598 2592 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-02-04 09:32:35] CVMFS is ok
[2026-02-04 09:32:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 09:32:35] Checking for apptainer binary...
[2026-02-04 09:32:35] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-04 09:32:35] Running /usr/bin/apptainer --version
[2026-02-04 09:32:35] apptainer version 1.3.2-1.el7
[2026-02-04 09:32:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 09:32:42] cg-vwn363.simple-grid.lan
[2026-02-04 09:32:42] apptainer works
[2026-02-04 09:32:42] Set ATHENA_PROC_NUMBER=8
[2026-02-04 09:32:42] Set ATHENA_CORE_NUMBER=8
[2026-02-04 09:32:42] Starting ATLAS job with PandaID=6994196980
[2026-02-04 09:32:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 13:38:01]  *** The last 200 lines of the pilot log: ***
[2026-02-04 13:38:01] 2026-02-04 12:37:25,820 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-04 13:38:01] 2026-02-04 12:37:25,957 | INFO     | job 6994196980 has state=finished
[2026-02-04 13:38:01] 2026-02-04 12:37:25,958 | INFO     | preparing for final server update for job 6994196980 in state='finished'
[2026-02-04 13:38:01] 2026-02-04 12:37:25,958 | INFO     | reading metadata from: /var/lib/boinc/slots/9/PanDA_Pilot-6994196980/jobReport.json
[2026-02-04 13:38:01] 2026-02-04 12:37:25,961 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/9/workernode_map.json
[2026-02-04 13:38:01] 2026-02-04 12:37:25,961 | INFO     | this job has now completed (state=finished)
[2026-02-04 13:38:01] 2026-02-04 12:37:25,961 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-04 13:38:01] 2026-02-04 12:37:25,961 | INFO     | log transfer has been attempted: DONE
[2026-02-04 13:38:01] 2026-02-04 12:37:25,962 | INFO     | job 6994196980 has finished - writing final server update
[2026-02-04 13:38:01] 2026-02-04 12:37:25,962 | INFO     | total number of processed events: 400 (read)
[2026-02-04 13:38:01] 2026-02-04 12:37:25,964 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6994196980/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 13:38:01] 2026-02-04 12:37:25,965 | INFO     | extracted standard info from prmon json
[2026-02-04 13:38:01] 2026-02-04 12:37:25,968 | INFO     | extracted standard memory fields from prmon json
[2026-02-04 13:38:01] 2026-02-04 12:37:25,968 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-04 13:38:01] 2026-02-04 12:37:25,969 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-04 13:38:01] 2026-02-04 12:37:25,969 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-04 13:38:01] 2026-02-04 12:37:25,974 | INFO     | fitting pss+swap vs Time
[2026-02-04 13:38:01] 2026-02-04 12:37:25,975 | INFO     | sum of square deviations: 3871990738.0
[2026-02-04 13:38:01] 2026-02-04 12:37:25,977 | INFO     | sum of deviations: 35831904958.0
[2026-02-04 13:38:01] 2026-02-04 12:37:25,977 | INFO     | mean x: 1770201572.5
[2026-02-04 13:38:01] 2026-02-04 12:37:25,977 | INFO     | mean y: 2461495.5
[2026-02-04 13:38:01] 2026-02-04 12:37:25,977 | INFO     | intersect: -16379213667.05101
[2026-02-04 13:38:01] 2026-02-04 12:37:25,978 | INFO     | chi2: 4.909491733085651
[2026-02-04 13:38:01] 2026-02-04 12:37:25,978 | INFO     | sum of square deviations: 3627000098.0
[2026-02-04 13:38:01] 2026-02-04 12:37:25,980 | INFO     | sum of deviations: 50148602518.00001
[2026-02-04 13:38:01] 2026-02-04 12:37:25,981 | INFO     | mean x: 1770201420.0
[2026-02-04 13:38:01] 2026-02-04 12:37:25,981 | INFO     | mean y: 2470240.3788546254
[2026-02-04 13:38:01] 2026-02-04 12:37:25,981 | INFO     | intersect: -24473163889.692017
[2026-02-04 13:38:01] 2026-02-04 12:37:25,981 | INFO     | chi2: 4.177637034603768
[2026-02-04 13:38:01] 2026-02-04 12:37:25,982 | INFO     | current chi2=4.177637034603768 (change=14.90693412415438 %)
[2026-02-04 13:38:01] 2026-02-04 12:37:25,982 | INFO     | right removable region: 226
[2026-02-04 13:38:01] 2026-02-04 12:37:25,982 | INFO     | sum of square deviations: 3627000098.0
[2026-02-04 13:38:01] 2026-02-04 12:37:25,984 | INFO     | sum of deviations: -36815610417.0
[2026-02-04 13:38:01] 2026-02-04 12:37:25,985 | INFO     | mean x: 1770201725.0
[2026-02-04 13:38:01] 2026-02-04 12:37:25,985 | INFO     | mean y: 2506620.8414096916
[2026-02-04 13:38:01] 2026-02-04 12:37:25,985 | INFO     | intersect: 17970815224.703316
[2026-02-04 13:38:01] 2026-02-04 12:37:25,985 | INFO     | chi2: 1.0613353103478171
[2026-02-04 13:38:01] 2026-02-04 12:37:25,986 | INFO     | current chi2=1.0613353103478171 (change=78.38197173863534 %)
[2026-02-04 13:38:01] 2026-02-04 12:37:25,986 | INFO     | sum of square deviations: 3392567795.5
[2026-02-04 13:38:01] 2026-02-04 12:37:25,988 | INFO     | sum of deviations: -44340940016.0
[2026-02-04 13:38:01] 2026-02-04 12:37:25,988 | INFO     | mean x: 1770201877.5
[2026-02-04 13:38:01] 2026-02-04 12:37:25,988 | INFO     | mean y: 2511448.5765765766
[2026-02-04 13:38:01] 2026-02-04 12:37:25,989 | INFO     | intersect: 23139091171.626675
[2026-02-04 13:38:01] 2026-02-04 12:37:25,989 | INFO     | chi2: 0.9556947383122887
[2026-02-04 13:38:01] 2026-02-04 12:37:25,989 | INFO     | current chi2=0.9556947383122887 (change=9.953552944630504 %)
[2026-02-04 13:38:01] 2026-02-04 12:37:25,989 | INFO     | left removable region: 20
[2026-02-04 13:38:01] 2026-02-04 12:37:25,990 | INFO     | sum of square deviations: 2710627567.5
[2026-02-04 13:38:01] 2026-02-04 12:37:25,991 | INFO     | sum of deviations: -14851170318.499998
[2026-02-04 13:38:01] 2026-02-04 12:37:25,992 | INFO     | mean x: 1770201999.5
[2026-02-04 13:38:01] 2026-02-04 12:37:25,992 | INFO     | mean y: 2511480.4029126214
[2026-02-04 13:38:01] 2026-02-04 12:37:25,992 | INFO     | intersect: 9701214359.371454
[2026-02-04 13:38:01] 2026-02-04 12:37:25,992 | INFO     | chi2: 0.12448261237259871
[2026-02-04 13:38:01] 2026-02-04 12:37:25,993 | INFO     | current memory leak: -5.48 B/s (using 206 data points, chi2=0.12)
[2026-02-04 13:38:01] 2026-02-04 12:37:25,993 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-02-04 13:38:01] 2026-02-04 12:37:25,993 | INFO     | ..............................
[2026-02-04 13:38:01] 2026-02-04 12:37:25,993 | INFO     | . Timing measurements:
[2026-02-04 13:38:01] 2026-02-04 12:37:25,994 | INFO     | . get job = 0 s
[2026-02-04 13:38:01] 2026-02-04 12:37:25,994 | INFO     | . initial setup = 102 s
[2026-02-04 13:38:01] 2026-02-04 12:37:25,994 | INFO     | . payload setup = 116 s
[2026-02-04 13:38:01] 2026-02-04 12:37:25,994 | INFO     | . stage-in = 0 s
[2026-02-04 13:38:01] 2026-02-04 12:37:25,994 | INFO     | . payload execution = 14220 s
[2026-02-04 13:38:01] 2026-02-04 12:37:25,994 | INFO     | . stage-out = 4 s
[2026-02-04 13:38:01] 2026-02-04 12:37:25,994 | INFO     | . log creation = 0 s
[2026-02-04 13:38:01] 2026-02-04 12:37:25,994 | INFO     | ..............................
[2026-02-04 13:38:01] 2026-02-04 12:37:26,118 | INFO     | 
[2026-02-04 13:38:01] 2026-02-04 12:37:26,118 | INFO     | job summary report
[2026-02-04 13:38:01] 2026-02-04 12:37:26,118 | INFO     | --------------------------------------------------
[2026-02-04 13:38:01] 2026-02-04 12:37:26,118 | INFO     | PanDA job id: 6994196980
[2026-02-04 13:38:01] 2026-02-04 12:37:26,119 | INFO     | task id: 48442098
[2026-02-04 13:38:01] 2026-02-04 12:37:26,119 | INFO     | errors: (none)
[2026-02-04 13:38:01] 2026-02-04 12:37:26,119 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 13:38:01] 2026-02-04 12:37:26,119 | INFO     | pilot state: finished 
[2026-02-04 13:38:01] 2026-02-04 12:37:26,119 | INFO     | transexitcode: 0
[2026-02-04 13:38:01] 2026-02-04 12:37:26,119 | INFO     | exeerrorcode: 0
[2026-02-04 13:38:01] 2026-02-04 12:37:26,119 | INFO     | exeerrordiag: 
[2026-02-04 13:38:01] 2026-02-04 12:37:26,119 | INFO     | exitcode: 0
[2026-02-04 13:38:01] 2026-02-04 12:37:26,120 | INFO     | exitmsg: OK
[2026-02-04 13:38:01] 2026-02-04 12:37:26,120 | INFO     | cpuconsumptiontime: 54970 s
[2026-02-04 13:38:01] 2026-02-04 12:37:26,120 | INFO     | nevents: 400
[2026-02-04 13:38:01] 2026-02-04 12:37:26,120 | INFO     | neventsw: 0
[2026-02-04 13:38:01] 2026-02-04 12:37:26,120 | INFO     | pid: 3785
[2026-02-04 13:38:01] 2026-02-04 12:37:26,120 | INFO     | pgrp: 3785
[2026-02-04 13:38:01] 2026-02-04 12:37:26,120 | INFO     | corecount: 8
[2026-02-04 13:38:01] 2026-02-04 12:37:26,120 | INFO     | event service: False
[2026-02-04 13:38:01] 2026-02-04 12:37:26,120 | INFO     | sizes: {0: 2277180, 1: 2277865, 2: 2278326, 13: 2278326, 14340: 2308793, 14345: 2317791, 14348: 2318169}
[2026-02-04 13:38:01] 2026-02-04 12:37:26,121 | INFO     | --------------------------------------------------
[2026-02-04 13:38:01] 2026-02-04 12:37:26,121 | INFO     | 
[2026-02-04 13:38:01] 2026-02-04 12:37:26,121 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-02-04 13:38:01] 2026-02-04 12:37:26,629 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 13:38:01] 2026-02-04 12:37:26,630 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 13:38:01] 2026-02-04 12:37:26,630 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 13:38:01] 2026-02-04 12:37:26,630 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 13:38:01] 2026-02-04 12:37:26,630 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 13:38:01] 2026-02-04 12:37:26,630 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 13:38:01] 2026-02-04 12:37:26,630 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 13:38:01] 2026-02-04 12:37:26,630 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 13:38:01] 2026-02-04 12:37:26,631 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 13:38:01] 2026-02-04 12:37:26,631 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 13:38:01] 2026-02-04 12:37:26,631 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 13:38:01] 2026-02-04 12:37:26,631 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 13:38:01] 2026-02-04 12:37:26,631 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 13:38:01] 2026-02-04 12:37:26,631 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 13:38:01] 2026-02-04 12:37:26,631 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 13:38:01] 2026-02-04 12:37:26,631 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 13:38:01] 2026-02-04 12:37:26,632 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 13:38:01] 2026-02-04 12:37:26,632 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 13:38:01] 2026-02-04 12:37:26,632 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 13:38:01] 2026-02-04 12:37:26,632 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 13:38:01] 2026-02-04 12:37:26,632 | INFO     | job 6994196980 has completed (purged errors)
[2026-02-04 13:38:01] 2026-02-04 12:37:26,632 | INFO     | overall cleanup function is called
[2026-02-04 13:38:01] 2026-02-04 12:37:27,641 | INFO     | --- collectZombieJob: --- 10, [3785]
[2026-02-04 13:38:01] 2026-02-04 12:37:27,641 | INFO     | zombie collector waiting for pid 3785
[2026-02-04 13:38:01] 2026-02-04 12:37:27,641 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 13:38:01] 2026-02-04 12:37:27,641 | INFO     | collected zombie processes
[2026-02-04 13:38:01] 2026-02-04 12:37:27,642 | INFO     | will attempt to kill all subprocesses of pid=3785
[2026-02-04 13:38:01] 2026-02-04 12:37:27,756 | INFO     | process IDs to be killed: [3785] (in reverse order)
[2026-02-04 13:38:01] 2026-02-04 12:37:28,556 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 13:38:01] 2026-02-04 12:37:28,557 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 13:38:01] 2026-02-04 12:37:28,560 | INFO     | did not find any defunct processes belonging to 3785
[2026-02-04 13:38:01] 2026-02-04 12:37:28,563 | INFO     | did not find any defunct processes belonging to 3785
[2026-02-04 13:38:01] 2026-02-04 12:37:28,563 | INFO     | ready for new job
[2026-02-04 13:38:01] 2026-02-04 12:37:28,563 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 13:38:01] 2026-02-04 12:37:28,565 | INFO     | **************************************
[2026-02-04 13:38:01] 2026-02-04 12:37:28,566 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 13:38:01] 2026-02-04 12:37:28,566 | INFO     | **************************************
[2026-02-04 13:38:01] 2026-02-04 12:37:28,566 | INFO     | 
[2026-02-04 13:38:01] 2026-02-04 12:37:28,566 | INFO     | pilot is running in a VM
[2026-02-04 13:38:01] 2026-02-04 12:37:28,567 | INFO     | architecture information:
[2026-02-04 13:38:01] 2026-02-04 12:37:28,575 | INFO     | executing command: cat /etc/os-release
[2026-02-04 13:38:01] 2026-02-04 12:37:28,873 | INFO     | cat /etc/os-release:
[2026-02-04 13:38:01] NAME="CentOS Linux"
[2026-02-04 13:38:01] VERSION="7 (Core)"
[2026-02-04 13:38:01] ID="centos"
[2026-02-04 13:38:01] ID_LIKE="rhel fedora"
[2026-02-04 13:38:01] VERSION_ID="7"
[2026-02-04 13:38:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 13:38:01] ANSI_COLOR="0;31"
[2026-02-04 13:38:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 13:38:01] HOME_URL="https://www.centos.org/"
[2026-02-04 13:38:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 13:38:01] 
[2026-02-04 13:38:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 13:38:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 13:38:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 13:38:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 13:38:01] 
[2026-02-04 13:38:01] 2026-02-04 12:37:28,873 | INFO     | **************************************
[2026-02-04 13:38:01] 2026-02-04 12:37:29,376 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-02-04 13:38:01] 2026-02-04 12:37:29,524 | INFO     | sufficient remaining disk space (492699648000 B)
[2026-02-04 13:38:01] 2026-02-04 12:37:29,524 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 13:38:01] 2026-02-04 12:37:29,524 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 13:38:01] 2026-02-04 12:37:29,524 | INFO     | update_server=False
[2026-02-04 13:38:01] 2026-02-04 12:37:29,525 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 13:38:01] 2026-02-04 12:37:29,525 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 13:38:01] 2026-02-04 12:37:29,525 | INFO     | aborting loop
[2026-02-04 13:38:01] 2026-02-04 12:37:29,525 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 13:38:01] 2026-02-04 12:37:29,550 | INFO     | [monitor] cgroup control has ended
[2026-02-04 13:38:01] 2026-02-04 12:37:29,736 | INFO     | all job control threads have been joined
[2026-02-04 13:38:01] 2026-02-04 12:37:30,404 | INFO     | all payload control threads have been joined
[2026-02-04 13:38:01] 2026-02-04 12:37:30,530 | INFO     | [job] retrieve thread has finished
[2026-02-04 13:38:01] 2026-02-04 12:37:30,531 | INFO     | [job] job monitor thread has finished
[2026-02-04 13:38:01] 2026-02-04 12:37:30,621 | INFO     | all data control threads have been joined
[2026-02-04 13:38:01] 2026-02-04 12:37:30,742 | INFO     | [job] control thread has finished
[2026-02-04 13:38:01] 2026-02-04 12:37:31,021 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 13:38:01] 2026-02-04 12:37:31,040 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 13:38:01] 2026-02-04 12:37:31,136 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 13:38:01] 2026-02-04 12:37:31,140 | INFO     | [payload] failed_post thread has finished
[2026-02-04 13:38:01] 2026-02-04 12:37:31,196 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 13:38:01] 2026-02-04 12:37:31,399 | INFO     | [job] validate thread has finished
[2026-02-04 13:38:01] 2026-02-04 12:37:31,410 | INFO     | [payload] control thread has finished
[2026-02-04 13:38:01] 2026-02-04 12:37:31,532 | INFO     | [data] copytool_out thread has finished
[2026-02-04 13:38:01] 2026-02-04 12:37:31,627 | INFO     | [data] control thread has finished
[2026-02-04 13:38:01] 2026-02-04 12:37:31,647 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 13:38:01] 2026-02-04 12:37:31,710 | INFO     | [data] copytool_in thread has finished
[2026-02-04 13:38:01] 2026-02-04 12:37:31,968 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 13:38:01] 2026-02-04 12:37:32,064 | INFO     | [payload] validate_post thread has finished
[2026-02-04 13:38:01] 2026-02-04 12:37:32,142 | INFO     | [job] queue monitor thread has finished
[2026-02-04 13:38:01] 2026-02-04 12:37:35,977 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 13:38:01] 2026-02-04 12:37:36,905 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140618039793472)>', '<ExcThread(monitor, started 140617589958400)>']
[2026-02-04 13:38:01] 2026-02-04 12:37:41,932 | INFO     | all workflow threads have been joined
[2026-02-04 13:38:01] 2026-02-04 12:37:41,932 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 13:38:01] 2026-02-04 12:37:41,932 | INFO     | traces error code: 0
[2026-02-04 13:38:01] 2026-02-04 12:37:41,933 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 13:38:01] 2026-02-04 12:37:57,848 | INFO     | PID=31678 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-04 13:38:01] 2026-02-04 12:37:57,849 | INFO     | .. there are 9 such processes running
[2026-02-04 13:38:01] 2026-02-04 12:37:57,850 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 13:38:01] 2026-02-04 12:37:57,850 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 13:38:01] 2026-02-04 12:37:57,850 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 13:38:01] 2026-02-04 12:37:57,850 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 13:38:01] 2026-02-04 12:37:57,850 | INFO     | [monitor] control thread has ended
[2026-02-04 13:38:01] 2026-02-04 12:37:58,041 [wrapper] ==== pilot stdout END ====
[2026-02-04 13:38:01] 2026-02-04 12:37:58,096 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 13:38:01] 2026-02-04 12:37:58,139 [wrapper] pilotpid: 31678
[2026-02-04 13:38:01] 2026-02-04 12:37:58,213 [wrapper] Pilot exit status: 0
[2026-02-04 13:38:01] 2026-02-04 12:37:58,528 [wrapper] pandaids: 6994196980
[2026-02-04 13:38:01] 2026-02-04 12:37:59,194 [wrapper] cleanup supervisor_pilot  8467 31679
[2026-02-04 13:38:01] 2026-02-04 12:37:59,277 [wrapper] Test setup, not cleaning
[2026-02-04 13:38:01] 2026-02-04 12:37:59,393 [wrapper] apfmon messages muted
[2026-02-04 13:38:01] 2026-02-04 12:37:59,515 [wrapper] ==== wrapper stdout END ====
[2026-02-04 13:38:01] 2026-02-04 12:37:59,628 [wrapper] ==== wrapper stderr END ====
[2026-02-04 13:38:01]  *** Error codes and diagnostics ***
[2026-02-04 13:38:01]     "exeErrorCode": 0,
[2026-02-04 13:38:01]     "exeErrorDiag": "",
[2026-02-04 13:38:01]     "pilotErrorCode": 0,
[2026-02-04 13:38:01]     "pilotErrorDiag": "",
[2026-02-04 13:38:01]  *** Listing of results directory ***
[2026-02-04 13:38:01] total 676992
[2026-02-04 13:38:01] -rw-r--r--. 1 boinc boinc    584422 Feb  3 16:10 pilot3.tar.gz
[2026-02-04 13:38:01] -rwx------. 1 boinc boinc     36322 Feb  3 16:11 runpilot2-wrapper.sh
[2026-02-04 13:38:01] -rw-r--r--. 1 boinc boinc      5111 Feb  3 16:12 queuedata.json
[2026-02-04 13:38:01] -rw-r--r--. 1 boinc boinc       100 Feb  4 09:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 13:38:01] -rwxr-xr-x. 1 boinc boinc      7986 Feb  4 09:32 run_atlas
[2026-02-04 13:38:01] -rw-r--r--. 1 boinc boinc       105 Feb  4 09:32 job.xml
[2026-02-04 13:38:01] -rw-r--r--. 1 boinc boinc      6391 Feb  4 09:32 init_data.xml
[2026-02-04 13:38:01] -rw-r--r--. 2 boinc boinc 499910643 Feb  4 09:32 EVNT.48442096._000019.pool.root.1
[2026-02-04 13:38:01] -rw-r--r--. 2 boinc boinc     15845 Feb  4 09:32 start_atlas.sh
[2026-02-04 13:38:01] drwxrwx--x. 2 boinc boinc        68 Feb  4 09:32 shared
[2026-02-04 13:38:01] -rw-r--r--. 2 boinc boinc    597759 Feb  4 09:32 input.tar.gz
[2026-02-04 13:38:01] -rw-r--r--. 1 boinc boinc         0 Feb  4 09:32 boinc_lockfile
[2026-02-04 13:38:01] -rw-r--r--. 1 boinc boinc      2525 Feb  4 09:32 pandaJob.out
[2026-02-04 13:38:01] -rw-------. 1 boinc boinc       415 Feb  4 09:38 workernode_map.json
[2026-02-04 13:38:01] -rw-------. 1 boinc boinc   1009244 Feb  4 09:38 agis_schedconf.cvmfs.json
[2026-02-04 13:38:01] drwx------. 5 boinc boinc      4096 Feb  4 09:38 pilot3
[2026-02-04 13:38:01] -rw-------. 1 boinc boinc 184501184 Feb  4 13:36 HITS.48442098._000903.pool.root.1
[2026-02-04 13:38:01] -rw-r--r--. 1 boinc boinc       532 Feb  4 13:36 boinc_task_state.xml
[2026-02-04 13:38:01] -rw-------. 1 boinc boinc      1034 Feb  4 13:37 memory_monitor_summary.json
[2026-02-04 13:38:01] -rw-------. 1 boinc boinc   1511668 Feb  4 13:37 agis_ddmendpoints.agis.ALL.json
[2026-02-04 13:38:01] -rw-------. 1 boinc boinc    452191 Feb  4 13:37 log.48442098._000903.job.log.tgz.1
[2026-02-04 13:38:01] -rw-------. 1 boinc boinc      6318 Feb  4 13:37 heartbeat.json
[2026-02-04 13:38:01] -rw-r--r--. 1 boinc boinc        28 Feb  4 13:37 wrapper_checkpoint.txt
[2026-02-04 13:38:01] -rw-r--r--. 1 boinc boinc      8192 Feb  4 13:37 boinc_mmap_file
[2026-02-04 13:38:01] -rw-------. 1 boinc boinc        95 Feb  4 13:37 pilot_heartbeat.json
[2026-02-04 13:38:01] -rw-------. 1 boinc boinc       820 Feb  4 13:37 pilotlog.txt
[2026-02-04 13:38:01] -rw-------. 1 boinc boinc   1999626 Feb  4 13:37 log.48442098._000903.job.log.1
[2026-02-04 13:38:01] -rw-------. 1 boinc boinc       357 Feb  4 13:38 output.list
[2026-02-04 13:38:01] -rw-r--r--. 1 boinc boinc       620 Feb  4 13:38 runtime_log
[2026-02-04 13:38:01] -rw-------. 1 boinc boinc   2467840 Feb  4 13:38 result.tar.gz
[2026-02-04 13:38:01] -rw-------. 1 boinc boinc       655 Feb  4 13:38 XnPKDmoEX78n9Rq4apOajLDm4fhM0noT9bVooX4SDmurUKDmWUuxPm.diag
[2026-02-04 13:38:01] -rw-r--r--. 1 boinc boinc      8816 Feb  4 13:38 runtime_log.err
[2026-02-04 13:38:01] -rw-r--r--. 1 boinc boinc     20898 Feb  4 13:38 stderr.txt
[2026-02-04 13:38:01] HITS file was successfully produced:
[2026-02-04 13:38:01] -rw-------. 1 boinc boinc 184501184 Feb  4 13:36 shared/HITS.pool.root.1
[2026-02-04 13:38:01]  *** Contents of shared directory: ***
[2026-02-04 13:38:01] total 671388
[2026-02-04 13:38:01] -rw-r--r--. 2 boinc boinc 499910643 Feb  4 09:32 ATLAS.root_0
[2026-02-04 13:38:01] -rw-r--r--. 2 boinc boinc     15845 Feb  4 09:32 start_atlas.sh
[2026-02-04 13:38:01] -rw-r--r--. 2 boinc boinc    597759 Feb  4 09:32 input.tar.gz
[2026-02-04 13:38:01] -rw-------. 1 boinc boinc 184501184 Feb  4 13:36 HITS.pool.root.1
[2026-02-04 13:38:01] -rw-------. 1 boinc boinc   2467840 Feb  4 13:38 result.tar.gz
13:38:03 (27490): run_atlas exited; CPU time 55187.306994
13:38:03 (27490): called boinc_finish(0)

</stderr_txt>
]]>

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