Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:19:42 (3084265): wrapper (7.7.26015): starting
10:19:42 (3084265): wrapper: running run_atlas (--nthreads 4)
[2026-02-04 10:19:42] Arguments: --nthreads 4
[2026-02-04 10:19:42] Threads: 4
[2026-02-04 10:19:42] Checking for CVMFS
[2026-02-04 10:19:42] No cvmfs_config command found, will try listing directly
[2026-02-04 10:19:42] CVMFS is ok
[2026-02-04 10:19:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-04 10:19:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-04 10:19:42] Further information can be found at the LHC@home message board.
[2026-02-04 10:19:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 10:19:42] Checking for apptainer binary...
[2026-02-04 10:19:42] which: no apptainer in ((null))
[2026-02-04 10:19:42] apptainer is not installed, using version from CVMFS
[2026-02-04 10:19:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 10:19:42] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot84/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2026-02-04 10:19:42] apptainer works
[2026-02-04 10:19:42] Set ATHENA_PROC_NUMBER=4
[2026-02-04 10:19:42] Set ATHENA_CORE_NUMBER=4
[2026-02-04 10:19:42] Starting ATLAS job with PandaID=6999410294
[2026-02-04 10:19:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot84/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
11:51:12 (3313025): wrapper (7.7.26015): starting
11:51:12 (3313025): wrapper: running run_atlas (--nthreads 4)
[2026-02-04 11:51:12] Arguments: --nthreads 4
[2026-02-04 11:51:12] Threads: 4
[2026-02-04 11:51:12] This job has been restarted, cleaning up previous attempt
[2026-02-04 11:51:12] Checking for CVMFS
[2026-02-04 11:51:12] No cvmfs_config command found, will try listing directly
[2026-02-04 11:51:12] CVMFS is ok
[2026-02-04 11:51:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-04 11:51:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-04 11:51:12] Further information can be found at the LHC@home message board.
[2026-02-04 11:51:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 11:51:12] Checking for apptainer binary...
[2026-02-04 11:51:12] which: no apptainer in ((null))
[2026-02-04 11:51:12] apptainer is not installed, using version from CVMFS
[2026-02-04 11:51:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 11:51:12] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot84/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2026-02-04 11:51:12] apptainer works
[2026-02-04 11:51:12] Set ATHENA_PROC_NUMBER=4
[2026-02-04 11:51:12] Set ATHENA_CORE_NUMBER=4
[2026-02-04 11:51:12] Starting ATLAS job with PandaID=6999410294
[2026-02-04 11:51:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot84/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 15:01:21]  *** The last 200 lines of the pilot log: ***
[2026-02-04 15:01:21] 2026-02-04 13:54:37,682 | INFO     | log transfer has been attempted: DONE
[2026-02-04 15:01:21] 2026-02-04 13:54:37,682 | INFO     | job 6999410294 has finished - writing final server update
[2026-02-04 15:01:21] 2026-02-04 13:54:37,682 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3308134/.job.ad'
[2026-02-04 15:01:21] 2026-02-04 13:54:37,682 | INFO     | total number of processed events: 400 (read)
[2026-02-04 15:01:21] 2026-02-04 13:54:37,708 | INFO     | using path: /scratch/boinc/var/slot84/slots/0/PanDA_Pilot-6999410294/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 15:01:21] 2026-02-04 13:54:37,709 | INFO     | extracted standard info from prmon json
[2026-02-04 15:01:21] 2026-02-04 13:54:37,709 | INFO     | extracted standard memory fields from prmon json
[2026-02-04 15:01:21] 2026-02-04 13:54:37,709 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-04 15:01:21] 2026-02-04 13:54:37,709 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-04 15:01:21] 2026-02-04 13:54:37,709 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-04 15:01:21] 2026-02-04 13:54:37,714 | INFO     | fitting pss+swap vs Time
[2026-02-04 15:01:21] 2026-02-04 13:54:37,714 | INFO     | sum of square deviations: 1808350185.0
[2026-02-04 15:01:21] 2026-02-04 13:54:37,715 | INFO     | sum of deviations: 4509599002.499998
[2026-02-04 15:01:21] 2026-02-04 13:54:37,715 | INFO     | mean x: 1770207783.5
[2026-02-04 15:01:21] 2026-02-04 13:54:37,715 | INFO     | mean y: 2301481.472222222
[2026-02-04 15:01:21] 2026-02-04 13:54:37,716 | INFO     | intersect: -4412179364.608666
[2026-02-04 15:01:21] 2026-02-04 13:54:37,716 | INFO     | chi2: 2.233391591936361
[2026-02-04 15:01:21] 2026-02-04 13:54:37,716 | INFO     | sum of square deviations: 1661798600.0
[2026-02-04 15:01:21] 2026-02-04 13:54:37,717 | INFO     | sum of deviations: 15860181658.0
[2026-02-04 15:01:21] 2026-02-04 13:54:37,717 | INFO     | mean x: 1770207631.0
[2026-02-04 15:01:21] 2026-02-04 13:54:37,718 | INFO     | mean y: 2313020.262857143
[2026-02-04 15:01:21] 2026-02-04 13:54:37,718 | INFO     | intersect: -16892522852.169477
[2026-02-04 15:01:21] 2026-02-04 13:54:37,718 | INFO     | chi2: 1.3762351846684029
[2026-02-04 15:01:21] 2026-02-04 13:54:37,718 | INFO     | current chi2=1.3762351846684029 (change=38.37913648294876 %)
[2026-02-04 15:01:21] 2026-02-04 13:54:37,718 | INFO     | sum of square deviations: 1523386702.5
[2026-02-04 15:01:21] 2026-02-04 13:54:37,719 | INFO     | sum of deviations: 15376478985.999996
[2026-02-04 15:01:21] 2026-02-04 13:54:37,720 | INFO     | mean x: 1770207478.5
[2026-02-04 15:01:21] 2026-02-04 13:54:37,720 | INFO     | mean y: 2312487.1764705884
[2026-02-04 15:01:21] 2026-02-04 13:54:37,720 | INFO     | intersect: -17865480404.37615
[2026-02-04 15:01:21] 2026-02-04 13:54:37,720 | INFO     | chi2: 1.3774051596378762
[2026-02-04 15:01:21] 2026-02-04 13:54:37,720 | INFO     | current chi2=1.3774051596378762 (change=-0.08501272039162788 %)
[2026-02-04 15:01:21] 2026-02-04 13:54:37,720 | INFO     | right removable region: 169
[2026-02-04 15:01:21] 2026-02-04 13:54:37,721 | INFO     | sum of square deviations: 1661798600.0
[2026-02-04 15:01:21] 2026-02-04 13:54:37,722 | INFO     | sum of deviations: -17357214256.0
[2026-02-04 15:01:21] 2026-02-04 13:54:37,722 | INFO     | mean x: 1770207936.0
[2026-02-04 15:01:21] 2026-02-04 13:54:37,722 | INFO     | mean y: 2323881.1428571427
[2026-02-04 15:01:21] 2026-02-04 13:54:37,722 | INFO     | intersect: 18491855899.537586
[2026-02-04 15:01:21] 2026-02-04 13:54:37,723 | INFO     | chi2: 0.9274180207580502
[2026-02-04 15:01:21] 2026-02-04 13:54:37,723 | INFO     | current chi2=0.9274180207580502 (change=58.47490318731009 %)
[2026-02-04 15:01:21] 2026-02-04 13:54:37,723 | INFO     | sum of square deviations: 1523386702.5
[2026-02-04 15:01:21] 2026-02-04 13:54:37,724 | INFO     | sum of deviations: -15095228573.5
[2026-02-04 15:01:21] 2026-02-04 13:54:37,724 | INFO     | mean x: 1770208088.5
[2026-02-04 15:01:21] 2026-02-04 13:54:37,725 | INFO     | mean y: 2321359.4294117647
[2026-02-04 15:01:21] 2026-02-04 13:54:37,725 | INFO     | intersect: 17543301384.20813
[2026-02-04 15:01:21] 2026-02-04 13:54:37,725 | INFO     | chi2: 0.9211027566434595
[2026-02-04 15:01:21] 2026-02-04 13:54:37,725 | INFO     | current chi2=0.9211027566434595 (change=0.680951197112685 %)
[2026-02-04 15:01:21] 2026-02-04 13:54:37,725 | INFO     | left removable region: 20
[2026-02-04 15:01:21] 2026-02-04 13:54:37,725 | INFO     | sum of square deviations: 1025693650.0
[2026-02-04 15:01:21] 2026-02-04 13:54:37,726 | INFO     | sum of deviations: 2176021951.0
[2026-02-04 15:01:21] 2026-02-04 13:54:37,727 | INFO     | mean x: 1770208058.0
[2026-02-04 15:01:21] 2026-02-04 13:54:37,727 | INFO     | mean y: 2326221.946308725
[2026-02-04 15:01:21] 2026-02-04 13:54:37,727 | INFO     | intersect: -3753192389.3320994
[2026-02-04 15:01:21] 2026-02-04 13:54:37,727 | INFO     | chi2: 0.0001438951826398736
[2026-02-04 15:01:21] 2026-02-04 13:54:37,727 | INFO     | current memory leak: 2.12 B/s (using 149 data points, chi2=0.00)
[2026-02-04 15:01:21] 2026-02-04 13:54:37,728 | INFO     | could have reported an average CPU frequency of 2769 MHz (10 samples)
[2026-02-04 15:01:21] 2026-02-04 13:54:37,728 | INFO     | ..............................
[2026-02-04 15:01:21] 2026-02-04 13:54:37,728 | INFO     | . Timing measurements:
[2026-02-04 15:01:21] 2026-02-04 13:54:37,728 | INFO     | . get job = 0 s
[2026-02-04 15:01:21] 2026-02-04 13:54:37,728 | INFO     | . initial setup = 1 s
[2026-02-04 15:01:21] 2026-02-04 13:54:37,728 | INFO     | . payload setup = 11 s
[2026-02-04 15:01:21] 2026-02-04 13:54:37,728 | INFO     | . stage-in = 0 s
[2026-02-04 15:01:21] 2026-02-04 13:54:37,729 | INFO     | . payload execution = 10955 s
[2026-02-04 15:01:21] 2026-02-04 13:54:37,729 | INFO     | . stage-out = 1 s
[2026-02-04 15:01:21] 2026-02-04 13:54:37,729 | INFO     | . log creation = 0 s
[2026-02-04 15:01:21] 2026-02-04 13:54:37,729 | INFO     | ..............................
[2026-02-04 15:01:21] 2026-02-04 13:54:37,827 | INFO     | 
[2026-02-04 15:01:21] 2026-02-04 13:54:37,827 | INFO     | job summary report
[2026-02-04 15:01:21] 2026-02-04 13:54:37,827 | INFO     | --------------------------------------------------
[2026-02-04 15:01:21] 2026-02-04 13:54:37,827 | INFO     | PanDA job id: 6999410294
[2026-02-04 15:01:21] 2026-02-04 13:54:37,827 | INFO     | task id: 48317892
[2026-02-04 15:01:21] 2026-02-04 13:54:37,827 | INFO     | errors: (none)
[2026-02-04 15:01:21] 2026-02-04 13:54:37,827 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 15:01:21] 2026-02-04 13:54:37,827 | INFO     | pilot state: finished 
[2026-02-04 15:01:21] 2026-02-04 13:54:37,827 | INFO     | transexitcode: 0
[2026-02-04 15:01:21] 2026-02-04 13:54:37,828 | INFO     | exeerrorcode: 0
[2026-02-04 15:01:21] 2026-02-04 13:54:37,828 | INFO     | exeerrordiag: 
[2026-02-04 15:01:21] 2026-02-04 13:54:37,828 | INFO     | exitcode: 0
[2026-02-04 15:01:21] 2026-02-04 13:54:37,828 | INFO     | exitmsg: OK
[2026-02-04 15:01:21] 2026-02-04 13:54:37,828 | INFO     | cpuconsumptiontime: 41191 s
[2026-02-04 15:01:21] 2026-02-04 13:54:37,828 | INFO     | nevents: 400
[2026-02-04 15:01:21] 2026-02-04 13:54:37,828 | INFO     | neventsw: 0
[2026-02-04 15:01:21] 2026-02-04 13:54:37,828 | INFO     | pid: 3320678
[2026-02-04 15:01:21] 2026-02-04 13:54:37,828 | INFO     | pgrp: 3320678
[2026-02-04 15:01:21] 2026-02-04 13:54:37,828 | INFO     | corecount: 4
[2026-02-04 15:01:21] 2026-02-04 13:54:37,828 | INFO     | event service: False
[2026-02-04 15:01:21] 2026-02-04 13:54:37,829 | INFO     | sizes: {0: 2277918, 1: 2278180, 11: 2278208, 10971: 2307671, 10972: 2316691, 10974: 2316747, 10976: 2317069}
[2026-02-04 15:01:21] 2026-02-04 13:54:37,829 | INFO     | --------------------------------------------------
[2026-02-04 15:01:21] 2026-02-04 13:54:37,829 | INFO     | 
[2026-02-04 15:01:21] 2026-02-04 13:54:37,829 | INFO     | executing command: ls -lF /scratch/boinc/var/slot84/slots/0
[2026-02-04 15:01:21] 2026-02-04 13:54:37,861 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 15:01:21] 2026-02-04 13:54:37,862 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 15:01:21] 2026-02-04 13:54:37,862 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 15:01:21] 2026-02-04 13:54:37,862 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 15:01:21] 2026-02-04 13:54:37,862 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 15:01:21] 2026-02-04 13:54:37,862 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 15:01:21] 2026-02-04 13:54:37,863 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 15:01:21] 2026-02-04 13:54:37,863 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 15:01:21] 2026-02-04 13:54:37,863 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 15:01:21] 2026-02-04 13:54:37,863 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 15:01:21] 2026-02-04 13:54:37,863 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 15:01:21] 2026-02-04 13:54:37,863 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 15:01:21] 2026-02-04 13:54:37,863 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 15:01:21] 2026-02-04 13:54:37,863 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 15:01:21] 2026-02-04 13:54:37,863 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 15:01:21] 2026-02-04 13:54:37,864 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 15:01:21] 2026-02-04 13:54:37,864 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 15:01:21] 2026-02-04 13:54:37,864 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 15:01:21] 2026-02-04 13:54:37,864 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 15:01:21] 2026-02-04 13:54:37,864 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 15:01:21] 2026-02-04 13:54:37,864 | INFO     | job 6999410294 has completed (purged errors)
[2026-02-04 15:01:21] 2026-02-04 13:54:37,864 | INFO     | overall cleanup function is called
[2026-02-04 15:01:21] 2026-02-04 13:54:38,874 | INFO     | --- collectZombieJob: --- 10, [3320678]
[2026-02-04 15:01:21] 2026-02-04 13:54:38,874 | INFO     | zombie collector waiting for pid 3320678
[2026-02-04 15:01:21] 2026-02-04 13:54:38,874 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 15:01:21] 2026-02-04 13:54:38,874 | INFO     | collected zombie processes
[2026-02-04 15:01:21] 2026-02-04 13:54:38,874 | INFO     | will attempt to kill all subprocesses of pid=3320678
[2026-02-04 15:01:21] 2026-02-04 13:54:39,720 | INFO     | process IDs to be killed: [3320678] (in reverse order)
[2026-02-04 15:01:21] 2026-02-04 13:54:39,975 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 15:01:21] 2026-02-04 13:54:39,976 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 15:01:21] 2026-02-04 13:54:40,011 | INFO     | did not find any defunct processes belonging to 3320678
[2026-02-04 15:01:21] 2026-02-04 13:54:40,042 | INFO     | did not find any defunct processes belonging to 3320678
[2026-02-04 15:01:21] 2026-02-04 13:54:40,043 | INFO     | ready for new job
[2026-02-04 15:01:21] 2026-02-04 13:54:40,043 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 15:01:21] 2026-02-04 13:54:40,045 | INFO     | **************************************
[2026-02-04 15:01:21] 2026-02-04 13:54:40,045 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 15:01:21] 2026-02-04 13:54:40,046 | INFO     | **************************************
[2026-02-04 15:01:21] 2026-02-04 13:54:40,046 | INFO     | 
[2026-02-04 15:01:21] 2026-02-04 13:54:40,054 | INFO     | architecture information:
[2026-02-04 15:01:21] 2026-02-04 13:54:40,054 | INFO     | executing command: cat /etc/os-release
[2026-02-04 15:01:21] 2026-02-04 13:54:40,075 | INFO     | cat /etc/os-release:
[2026-02-04 15:01:21] NAME="CentOS Linux"
[2026-02-04 15:01:21] VERSION="7 (Core)"
[2026-02-04 15:01:21] ID="centos"
[2026-02-04 15:01:21] ID_LIKE="rhel fedora"
[2026-02-04 15:01:21] VERSION_ID="7"
[2026-02-04 15:01:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 15:01:21] ANSI_COLOR="0;31"
[2026-02-04 15:01:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 15:01:21] HOME_URL="https://www.centos.org/"
[2026-02-04 15:01:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 15:01:21] 
[2026-02-04 15:01:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 15:01:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 15:01:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 15:01:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 15:01:21] 
[2026-02-04 15:01:21] 2026-02-04 13:54:40,075 | INFO     | **************************************
[2026-02-04 15:01:21] 2026-02-04 13:54:40,578 | INFO     | executing command: df -mP /scratch/boinc/var/slot84/slots/0
[2026-02-04 15:01:21] 2026-02-04 13:54:40,603 | INFO     | sufficient remaining disk space (3193652117504 B)
[2026-02-04 15:01:21] 2026-02-04 13:54:40,604 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 15:01:21] 2026-02-04 13:54:40,604 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 15:01:21] 2026-02-04 13:54:40,604 | INFO     | update_server=False
[2026-02-04 15:01:21] 2026-02-04 13:54:40,604 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 15:01:21] 2026-02-04 13:54:40,605 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 15:01:21] 2026-02-04 13:54:40,605 | INFO     | aborting loop
[2026-02-04 15:01:21] 2026-02-04 13:54:40,721 | INFO     | all job control threads have been joined
[2026-02-04 15:01:21] 2026-02-04 13:54:40,944 | INFO     | all payload control threads have been joined
[2026-02-04 15:01:21] 2026-02-04 13:54:41,509 | INFO     | all data control threads have been joined
[2026-02-04 15:01:21] 2026-02-04 13:54:41,608 | INFO     | [job] job monitor thread has finished
[2026-02-04 15:01:21] 2026-02-04 13:54:41,610 | INFO     | [job] retrieve thread has finished
[2026-02-04 15:01:21] 2026-02-04 13:54:41,726 | INFO     | [job] control thread has finished
[2026-02-04 15:01:21] 2026-02-04 13:54:41,782 | INFO     | [payload] validate_post thread has finished
[2026-02-04 15:01:21] 2026-02-04 13:54:41,790 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 15:01:21] 2026-02-04 13:54:41,868 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 15:01:21] 2026-02-04 13:54:41,950 | INFO     | [payload] control thread has finished
[2026-02-04 15:01:21] 2026-02-04 13:54:42,132 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 15:01:21] 2026-02-04 13:54:42,271 | INFO     | [data] copytool_in thread has finished
[2026-02-04 15:01:21] 2026-02-04 13:54:42,424 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 15:01:21] 2026-02-04 13:54:42,515 | INFO     | [data] control thread has finished
[2026-02-04 15:01:21] 2026-02-04 13:54:42,671 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 15:01:21] 2026-02-04 13:54:42,754 | INFO     | [payload] failed_post thread has finished
[2026-02-04 15:01:21] 2026-02-04 13:54:42,834 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 15:01:21] 2026-02-04 13:54:42,877 | INFO     | [job] validate thread has finished
[2026-02-04 15:01:21] 2026-02-04 13:54:42,955 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 15:01:21] 2026-02-04 13:54:43,840 | INFO     | [job] queue monitor thread has finished
[2026-02-04 15:01:21] 2026-02-04 13:54:43,873 | INFO     | [data] copytool_out thread has finished
[2026-02-04 15:01:21] 2026-02-04 13:54:46,138 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 15:01:21] 2026-02-04 13:54:48,306 | INFO     | [monitor] cgroup control has ended
[2026-02-04 15:01:21] 2026-02-04 13:54:48,458 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23056964134720)>', '<ExcThread(monitor, started 23056252655360)>']
[2026-02-04 15:01:21] 2026-02-04 13:54:53,484 | INFO     | all workflow threads have been joined
[2026-02-04 15:01:21] 2026-02-04 13:54:53,484 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 15:01:21] 2026-02-04 13:54:53,484 | INFO     | traces error code: 0
[2026-02-04 15:01:21] 2026-02-04 13:54:53,484 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 15:01:21] 2026-02-04 13:55:11,477 | INFO     | PID=3317426 has CPU usage=9.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-04 15:01:21] 2026-02-04 13:55:11,477 | INFO     | .. there are 12 such processes running
[2026-02-04 15:01:21] 2026-02-04 13:55:11,478 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 15:01:21] 2026-02-04 13:55:11,478 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 15:01:21] 2026-02-04 13:55:11,478 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 15:01:21] 2026-02-04 13:55:11,478 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 15:01:21] 2026-02-04 13:55:11,478 | INFO     | [monitor] control thread has ended
[2026-02-04 15:01:21] 2026-02-04 13:55:11,693 [wrapper] ==== pilot stdout END ====
[2026-02-04 15:01:21] 2026-02-04 13:55:11,698 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 15:01:21] 2026-02-04 13:55:11,702 [wrapper] pilotpid: 3317426
[2026-02-04 15:01:21] 2026-02-04 13:55:11,705 [wrapper] Pilot exit status: 0
[2026-02-04 15:01:21] 2026-02-04 13:55:11,720 [wrapper] pandaids: 6999410294 6999410294
[2026-02-04 15:01:21] 2026-02-04 13:55:11,901 [wrapper] cleanup supervisor_pilot 3538013 3317427
[2026-02-04 15:01:21] 2026-02-04 13:55:11,905 [wrapper] Test setup, not cleaning
[2026-02-04 15:01:21] 2026-02-04 13:55:11,910 [wrapper] apfmon messages muted
[2026-02-04 15:01:21] 2026-02-04 13:55:11,914 [wrapper] ==== wrapper stdout END ====
[2026-02-04 15:01:21] 2026-02-04 13:55:11,918 [wrapper] ==== wrapper stderr END ====
[2026-02-04 15:01:21]  *** Error codes and diagnostics ***
[2026-02-04 15:01:21]     "exeErrorCode": 0,
[2026-02-04 15:01:21]     "exeErrorDiag": "",
[2026-02-04 15:01:21]     "pilotErrorCode": 0,
[2026-02-04 15:01:21]     "pilotErrorDiag": "",
[2026-02-04 15:01:21]  *** Listing of results directory ***
[2026-02-04 15:01:21] total 1165580
[2026-02-04 15:01:21] drwx------ 5 boinc boinc      4096 Jan 14 11:00 pilot3
[2026-02-04 15:01:21] -rw-r--r-- 1 boinc boinc    584422 Feb  3 14:23 pilot3.tar.gz
[2026-02-04 15:01:21] -rwx------ 1 boinc boinc     36322 Feb  3 14:24 runpilot2-wrapper.sh
[2026-02-04 15:01:21] -rw-r--r-- 1 boinc boinc      5111 Feb  3 14:26 queuedata.json
[2026-02-04 15:01:21] -rw-r--r-- 1 boinc boinc       100 Feb  4 10:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 15:01:21] -rwxr-xr-x 1 boinc boinc      7986 Feb  4 10:19 run_atlas
[2026-02-04 15:01:21] -rw-r--r-- 1 boinc boinc       105 Feb  4 10:19 job.xml
[2026-02-04 15:01:21] -rw-r--r-- 3 boinc boinc 500832684 Feb  4 10:19 EVNT.48317889._000154.pool.root.1
[2026-02-04 15:01:21] -rw-r--r-- 3 boinc boinc 500832684 Feb  4 10:19 ATLAS.root_0
[2026-02-04 15:01:21] -rw-r--r-- 2 boinc boinc     15845 Feb  4 10:19 start_atlas.sh
[2026-02-04 15:01:21] drwxrwx--x 2 boinc boinc      4096 Feb  4 10:19 shared
[2026-02-04 15:01:21] -rw-r--r-- 2 boinc boinc    597760 Feb  4 10:19 input.tar.gz
[2026-02-04 15:01:21] -rw-r--r-- 1 boinc boinc         0 Feb  4 10:19 boinc_lockfile
[2026-02-04 15:01:21] -rw-r--r-- 1 boinc boinc      6694 Feb  4 11:51 init_data.xml
[2026-02-04 15:01:21] -rw-r--r-- 1 boinc boinc      2520 Feb  4 11:51 pandaJob.out
[2026-02-04 15:01:21] -rw------- 1 boinc boinc   1009236 Feb  4 11:51 agis_schedconf.cvmfs.json
[2026-02-04 15:01:21] -rw------- 1 boinc boinc       437 Feb  4 11:51 workernode_map.json
[2026-02-04 15:01:21] -rw------- 1 boinc boinc 184211621 Feb  4 14:53 HITS.48317892._010648.pool.root.1
[2026-02-04 15:01:21] -rw-r--r-- 1 boinc boinc       530 Feb  4 14:54 boinc_task_state.xml
[2026-02-04 15:01:21] -rw------- 1 boinc boinc      1025 Feb  4 14:54 memory_monitor_summary.json
[2026-02-04 15:01:21] -rw------- 1 boinc boinc   1511668 Feb  4 14:54 agis_ddmendpoints.agis.ALL.json
[2026-02-04 15:01:21] -rw------- 1 boinc boinc    360111 Feb  4 14:54 log.48317892._010648.job.log.tgz.1
[2026-02-04 15:01:21] -rw------- 1 boinc boinc      6340 Feb  4 14:54 heartbeat.json
[2026-02-04 15:01:21] -rw------- 1 boinc boinc       823 Feb  4 14:55 pilotlog.txt
[2026-02-04 15:01:21] -rw------- 1 boinc boinc        97 Feb  4 14:55 pilot_heartbeat.json
[2026-02-04 15:01:21] -rw------- 1 boinc boinc   1510013 Feb  4 14:55 log.48317892._010648.job.log.1
[2026-02-04 15:01:21] -rw------- 1 boinc boinc       357 Feb  4 14:55 output.list
[2026-02-04 15:01:21] -rw-r--r-- 1 boinc boinc       620 Feb  4 14:55 runtime_log
[2026-02-04 15:01:21] -rw------- 1 boinc boinc   1884160 Feb  4 14:55 result.tar.gz
[2026-02-04 15:01:21] -rw------- 1 boinc boinc       790 Feb  4 14:55 tBPNDmKZV78n9Rq4apOajLDm4fhM0noT9bVooX4SDmFhUKDmzj0HYo.diag
[2026-02-04 15:01:21] -rw-r--r-- 1 boinc boinc      9282 Feb  4 14:55 runtime_log.err
[2026-02-04 15:01:21] -rw-r--r-- 1 boinc boinc        26 Feb  4 15:01 wrapper_checkpoint.txt
[2026-02-04 15:01:21] -rw-r--r-- 1 boinc boinc      8192 Feb  4 15:01 boinc_mmap_file
[2026-02-04 15:01:21] -rw-r--r-- 1 boinc boinc     22810 Feb  4 15:01 stderr.txt
[2026-02-04 15:01:21] HITS file was successfully produced:
[2026-02-04 15:01:21] -rw------- 1 boinc boinc 184211621 Feb  4 14:53 shared/HITS.pool.root.1
[2026-02-04 15:01:21]  *** Contents of shared directory: ***
[2026-02-04 15:01:21] total 671440
[2026-02-04 15:01:21] -rw-r--r-- 3 boinc boinc 500832684 Feb  4 10:19 ATLAS.root_0
[2026-02-04 15:01:21] -rw-r--r-- 2 boinc boinc     15845 Feb  4 10:19 start_atlas.sh
[2026-02-04 15:01:21] -rw-r--r-- 2 boinc boinc    597760 Feb  4 10:19 input.tar.gz
[2026-02-04 15:01:21] -rw------- 1 boinc boinc 184211621 Feb  4 14:53 HITS.pool.root.1
[2026-02-04 15:01:21] -rw------- 1 boinc boinc   1884160 Feb  4 14:55 result.tar.gz
15:01:22 (3313025): run_atlas exited; CPU time 42023.058445
15:01:22 (3313025): called boinc_finish(0)

</stderr_txt>
]]>

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