Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-04 00:56:40 (61033): vboxwrapper version 26210
2026-02-04 00:56:40 (61033): BOINC client version: 7.24.1
2026-02-04 00:56:40 (61033): Detected: VirtualBox VboxManage Interface (Version: 6.1.32)
2026-02-04 00:56:40 (61033): Detected: Sandbox Configuration Enabled
2026-02-04 00:56:40 (61033): Successfully copied 'init_data.xml' to the shared directory.
2026-02-04 00:56:40 (61033): Create VM. (boinc_d352a48d8fcd0270, slot#0)
2026-02-04 00:56:40 (61033): Setting Memory Size for VM. (4200MB)
2026-02-04 00:56:40 (61033): Setting CPU Count for VM. (2)
2026-02-04 00:56:40 (61033): Setting Chipset Options for VM.
2026-02-04 00:56:40 (61033): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-04 00:56:40 (61033): Setting Boot Options for VM.
2026-02-04 00:56:40 (61033): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-04 00:56:40 (61033): Enabling VM Network Access.
2026-02-04 00:56:40 (61033): Disabling USB Support for VM.
2026-02-04 00:56:40 (61033): Disabling COM Port Support for VM.
2026-02-04 00:56:40 (61033): Disabling Audio Support for VM.
2026-02-04 00:56:41 (61033): Disabling Clipboard Support for VM.
2026-02-04 00:56:41 (61033): Disabling Drag and Drop Support for VM.
2026-02-04 00:56:41 (61033): Adding storage controller(s) to VM.
2026-02-04 00:56:41 (61033): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-04 00:56:41 (61033): Adding VirtualBox Guest Additions to VM.
2026-02-04 00:56:41 (61033): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-04 00:56:41 (61033): forwarding host port 59822 to guest port 80
2026-02-04 00:56:41 (61033): Enabling remote desktop for VM.
2026-02-04 00:56:41 (61033): Required extension pack not installed, remote desktop not enabled.
2026-02-04 00:56:41 (61033): Enabling shared directory for VM.
2026-02-04 00:56:41 (61033): Starting VM using VBoxManage interface. (boinc_d352a48d8fcd0270, slot#0)
2026-02-04 00:56:42 (61033): Successfully started VM. (PID = '61100')
2026-02-04 00:56:42 (61033): Reporting VM Process ID to BOINC.
2026-02-04 00:56:42 (61033): Guest Log: BIOS: VirtualBox 6.1.32
2026-02-04 00:56:42 (61033): Guest Log: CPUID EDX: 0x178bfbff
2026-02-04 00:56:42 (61033): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-04 00:56:42 (61033): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-04 00:56:42 (61033): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-04 00:56:42 (61033): Detected: Web Application Enabled (http://localhost:59822)
2026-02-04 00:56:42 (61033): Preference change detected
2026-02-04 00:56:42 (61033): Setting CPU throttle for VM. (80%)
2026-02-04 00:56:42 (61033): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-04 00:56:44 (61033): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-04 00:56:44 (61033): Guest Log: BIOS: Booting from Hard Disk...
2026-02-04 00:56:48 (61033): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-04 00:56:48 (61033): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-04 00:56:48 (61033): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-04 00:56:48 (61033): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-04 00:56:48 (61033): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-04 00:56:48 (61033): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-04 00:56:48 (61033): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-04 00:56:48 (61033): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-04 00:56:48 (61033): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-04 00:56:48 (61033): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-04 00:56:48 (61033): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-04 00:56:48 (61033): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-04 00:56:48 (61033): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-04 00:56:48 (61033): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-04 00:56:48 (61033): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-04 00:56:48 (61033): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-04 00:56:48 (61033): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-04 00:56:48 (61033): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-04 00:56:48 (61033): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-04 00:56:48 (61033): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-04 00:56:48 (61033): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-04 00:56:48 (61033): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-04 00:56:48 (61033): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-04 00:56:48 (61033): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-04 00:56:48 (61033): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-04 00:56:48 (61033): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-04 00:56:48 (61033): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-04 00:56:48 (61033): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-04 00:56:48 (61033): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-04 00:56:48 (61033): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-04 00:56:48 (61033): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-04 00:56:48 (61033): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-04 00:56:58 (61033): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-04 00:56:58 (61033): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-02-04 00:57:09 (61033): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-04 00:57:09 (61033): Guest Log: 00:00:00.000322 main     Log opened 2026-02-03T23:57:06.974682000Z
2026-02-04 00:57:09 (61033): Guest Log: 00:00:00.000464 main     OS Product: Linux
2026-02-04 00:57:09 (61033): Guest Log: 00:00:00.000521 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-04 00:57:09 (61033): Guest Log: 00:00:00.000567 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-04 00:57:09 (61033): Guest Log: 00:00:00.000623 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-04 00:57:09 (61033): Guest Log: 00:00:00.000624 main     Process ID: 1270
2026-02-04 00:57:09 (61033): Guest Log: 00:00:00.000625 main     Package type: LINUX_64BITS_GENERIC
2026-02-04 00:57:09 (61033): Guest Log: 00:00:00.002554 main     5.2.32 r132073 started. Verbose level = 0
2026-02-04 00:57:09 (61033): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-04 00:57:09 (61033): Guest Log: [INFO] Mounting shared directory
2026-02-04 00:57:09 (61033): Guest Log: [INFO] Checking for init_data.xml
2026-02-04 00:57:13 (61033): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-04 00:57:13 (61033): Guest Log: [INFO] Detected branch: prod
2026-02-04 00:57:13 (61033): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-04 00:57:13 (61033): Guest Log: Copying input files
2026-02-04 00:57:17 (61033): Guest Log: Copied input files into RunAtlas.
2026-02-04 00:57:17 (61033): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-04 00:57:17 (61033): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-04 00:57:17 (61033): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-04 00:57:17 (61033): Guest Log: Further information can be found at the LHC@home message board.
2026-02-04 00:57:49 (61033): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-04 00:57:49 (61033): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-04 00:57:49 (61033): Guest Log: 2.6.3.0 1543 0 30128 155848 4 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-02-04 00:57:50 (61033): Guest Log: copied the webapp to /var/www
2026-02-04 00:57:50 (61033): Guest Log: ATHENA_PROC_NUMBER=2
2026-02-04 00:57:50 (61033): Guest Log: ATHENA_CORE_NUMBER=2
2026-02-04 00:57:50 (61033): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-04 00:57:50 (61033): Guest Log:  *** Starting ATLAS job. (PandaID=6984226761 taskID=48317931) ***
2026-02-04 02:36:17 (61033): Status Report: Elapsed Time: '6000.000000'
2026-02-04 02:36:17 (61033): Status Report: CPU Time: '8834.350000'
2026-02-04 04:15:52 (61033): Status Report: Elapsed Time: '12000.000000'
2026-02-04 04:15:52 (61033): Status Report: CPU Time: '18103.380000'
2026-02-04 05:55:26 (61033): Status Report: Elapsed Time: '18000.000000'
2026-02-04 05:55:26 (61033): Status Report: CPU Time: '27373.500000'
2026-02-04 06:23:16 (61033): Guest Log:  *** Job finished ***
2026-02-04 06:23:16 (61033): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-04 06:23:16 (61033): Guest Log: 2026-02-04 05:22:53,794 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-02-04 06:23:16 (61033): Guest Log: 2026-02-04 05:22:53,794 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-04 06:23:16 (61033): Guest Log: 2026-02-04 05:23:04,941 | INFO     | [monitor] cgroup control has ended
2026-02-04 06:23:16 (61033): Guest Log: 2026-02-04 05:23:05,954 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140605519742784)>', '<ExcThread(monitor, started 140604923168512)>']
2026-02-04 06:23:16 (61033): Guest Log: 2026-02-04 05:23:06,836 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-04 06:23:16 (61033): Guest Log: 2026-02-04 05:23:06,836 | INFO     | [monitor] control thread has ended
2026-02-04 06:23:16 (61033): Guest Log: 2026-02-04 05:23:10,962 | INFO     | all workflow threads have been joined
2026-02-04 06:23:16 (61033): Guest Log: 2026-02-04 05:23:10,962 | INFO     | end of generic workflow (traces error code: 0)
2026-02-04 06:23:16 (61033): Guest Log: 2026-02-04 05:23:10,963 | INFO     | traces error code: 0
2026-02-04 06:23:16 (61033): Guest Log: 2026-02-04 05:23:10,963 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-04 06:23:16 (61033): Guest Log: 2026-02-04 05:23:11,277 [wrapper] ==== pilot stdout END ====
2026-02-04 06:23:16 (61033): Guest Log: 2026-02-04 05:23:11,283 [wrapper] ==== wrapper stdout RESUME ====
2026-02-04 06:23:16 (61033): Guest Log: 2026-02-04 05:23:11,289 [wrapper] pilotpid: 5921
2026-02-04 06:23:16 (61033): Guest Log: 2026-02-04 05:23:11,295 [wrapper] Pilot exit status: 0
2026-02-04 06:23:16 (61033): Guest Log: 2026-02-04 05:23:11,360 [wrapper] pandaids: 6984226761
2026-02-04 06:23:16 (61033): Guest Log: 2026-02-04 05:23:11,398 [wrapper] cleanup supervisor_pilot 29636 5922
2026-02-04 06:23:16 (61033): Guest Log: 2026-02-04 05:23:11,405 [wrapper] Test setup, not cleaning
2026-02-04 06:23:16 (61033): Guest Log: 2026-02-04 05:23:11,410 [wrapper] apfmon messages muted
2026-02-04 06:23:16 (61033): Guest Log: 2026-02-04 05:23:11,416 [wrapper] ==== wrapper stdout END ====
2026-02-04 06:23:16 (61033): Guest Log: 2026-02-04 05:23:11,422 [wrapper] ==== wrapper stderr END ====
2026-02-04 06:23:16 (61033): Guest Log:  *** Error codes and diagnostics ***
2026-02-04 06:23:16 (61033): Guest Log:     "exeErrorCode": 0,
2026-02-04 06:23:16 (61033): Guest Log:     "exeErrorDiag": "",
2026-02-04 06:23:16 (61033): Guest Log:     "pilotErrorCode": 0,
2026-02-04 06:23:16 (61033): Guest Log:     "pilotErrorDiag": "",
2026-02-04 06:23:16 (61033): Guest Log:  *** Listing of results directory ***
2026-02-04 06:23:16 (61033): Guest Log: total 191624
2026-02-04 06:23:16 (61033): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Jan 26 09:48 pilot3.tar.gz
2026-02-04 06:23:16 (61033): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 26 09:51 runpilot2-wrapper.sh
2026-02-04 06:23:16 (61033): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jan 26 09:54 queuedata.json
2026-02-04 06:23:16 (61033): Guest Log: -rw-r-----. 1 atlas atlas     15845 Feb  3 23:57 start_atlas.sh
2026-02-04 06:23:16 (61033): Guest Log: -rw-r-----. 1 atlas atlas    597754 Feb  3 23:57 input.tar.gz
2026-02-04 06:23:16 (61033): Guest Log: -rw-r--r--. 1 atlas atlas      7960 Feb  3 23:57 init_data.xml
2026-02-04 06:23:16 (61033): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb  3 23:57 EVNT.48317929._000067.pool.root.1 -> /data/./ATLAS.root_0
2026-02-04 06:23:16 (61033): Guest Log: -rw-r--r--. 1 atlas atlas      2508 Feb  3 23:57 pandaJob.out
2026-02-04 06:23:16 (61033): Guest Log: -rw-------. 1 atlas atlas   1009236 Feb  3 23:58 agis_schedconf.cvmfs.json
2026-02-04 06:23:16 (61033): Guest Log: -rw-------. 1 atlas atlas       425 Feb  3 23:58 workernode_map.json
2026-02-04 06:23:16 (61033): Guest Log: drwx------. 5 atlas atlas      4096 Feb  3 23:58 pilot3
2026-02-04 06:23:16 (61033): Guest Log: -rw-------. 1 atlas atlas 186040329 Feb  4 05:21 HITS.48317931._002136.pool.root.1
2026-02-04 06:23:16 (61033): Guest Log: -rw-------. 1 atlas atlas      1029 Feb  4 05:22 memory_monitor_summary.json
2026-02-04 06:23:16 (61033): Guest Log: -rw-------. 1 atlas atlas   1511668 Feb  4 05:22 agis_ddmendpoints.agis.ALL.json
2026-02-04 06:23:16 (61033): Guest Log: -rw-------. 1 atlas atlas    468413 Feb  4 05:22 log.48317931._002136.job.log.tgz.1
2026-02-04 06:23:16 (61033): Guest Log: -rw-------. 1 atlas atlas      6371 Feb  4 05:22 heartbeat.json
2026-02-04 06:23:16 (61033): Guest Log: -rw-------. 1 atlas atlas        95 Feb  4 05:22 pilot_heartbeat.json
2026-02-04 06:23:16 (61033): Guest Log: -rw-------. 1 atlas atlas      4801 Feb  4 05:23 pilotlog.txt
2026-02-04 06:23:16 (61033): Guest Log: -rw-------. 1 atlas atlas   2690398 Feb  4 05:23 log.48317931._002136.job.log.1
2026-02-04 06:23:16 (61033): Guest Log: -rw-------. 1 atlas atlas       357 Feb  4 05:23 output.list
2026-02-04 06:23:16 (61033): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb  4 05:23 runtime_log
2026-02-04 06:23:16 (61033): Guest Log: -rw-------. 1 atlas atlas   3174400 Feb  4 05:23 result.tar.gz
2026-02-04 06:23:16 (61033): Guest Log: -rw-------. 1 atlas atlas       657 Feb  4 05:23 SiOKDmRRY48nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmdh9KDmiFwdHm.diag
2026-02-04 06:23:16 (61033): Guest Log: -rw-r--r--. 1 atlas atlas      8749 Feb  4 05:23 runtime_log.err
2026-02-04 06:23:16 (61033): Guest Log: Looking for outputfile HITS.48317931._002136.pool.root.1
2026-02-04 06:23:16 (61033): Guest Log: HITS file was successfully produced
2026-02-04 06:23:16 (61033): Guest Log: -rw-------. 1 atlas atlas 186040329 Feb  4 05:21 /home/atlas/RunAtlas/HITS.48317931._002136.pool.root.1
2026-02-04 06:23:16 (61033): Guest Log: Successfully finished the ATLAS job!
2026-02-04 06:23:16 (61033): Guest Log: Copying the results back to the shared directory!
2026-02-04 06:23:16 (61033): Guest Log:  *** Contents of shared directory: ***
2026-02-04 06:23:16 (61033): Guest Log: total 485420
2026-02-04 06:23:16 (61033): Guest Log: -rw-rw----. 1 root root 492682922 Feb  3 23:56 ATLAS.root_0
2026-02-04 06:23:16 (61033): Guest Log: -rw-rw-r--. 1 root root      7960 Feb  3 23:56 init_data.xml
2026-02-04 06:23:16 (61033): Guest Log: -rw-rw----. 1 root root    597754 Feb  3 23:56 input.tar.gz
2026-02-04 06:23:16 (61033): Guest Log: -rw-r--r--. 1 root root   3174400 Feb  4 05:23 result.tar.gz
2026-02-04 06:23:16 (61033): Guest Log: -rw-rw----. 1 root root     15845 Feb  3 23:56 start_atlas.sh
2026-02-04 06:23:16 (61033): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-04 06:23:16 (61033): VM Completion File Detected.
2026-02-04 06:23:16 (61033): Powering off VM.
2026-02-04 06:23:17 (61033): Successfully stopped VM.
2026-02-04 06:23:17 (61033): Deregistering VM. (boinc_d352a48d8fcd0270, slot#0)
2026-02-04 06:23:17 (61033): Removing network bandwidth throttle group from VM.
2026-02-04 06:23:17 (61033): Removing VM from VirtualBox.
2026-02-04 06:23:22 (61033): called boinc_finish(0)

</stderr_txt>
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