Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:58:58 (1239470): wrapper (7.7.26015): starting
05:58:58 (1239470): wrapper: running run_atlas (--nthreads 4)
[2026-02-05 05:58:58] Arguments: --nthreads 4
[2026-02-05 05:58:58] Threads: 4
[2026-02-05 05:58:58] Checking for CVMFS
[2026-02-05 05:58:58] No cvmfs_config command found, will try listing directly
[2026-02-05 05:58:58] CVMFS is ok
[2026-02-05 05:58:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-05 05:58:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-05 05:58:58] Further information can be found at the LHC@home message board.
[2026-02-05 05:58:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-05 05:58:58] Checking for apptainer binary...
[2026-02-05 05:58:58] which: no apptainer in ((null))
[2026-02-05 05:58:58] apptainer is not installed, using version from CVMFS
[2026-02-05 05:58:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-05 05:58:58] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut33.grid.cesnet.cz
[2026-02-05 05:58:58] apptainer works
[2026-02-05 05:58:58] Set ATHENA_PROC_NUMBER=4
[2026-02-05 05:58:58] Set ATHENA_CORE_NUMBER=4
[2026-02-05 05:58:58] Starting ATLAS job with PandaID=7000017018
[2026-02-05 05:58:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-05 10:15:36]  *** The last 200 lines of the pilot log: ***
[2026-02-05 10:15:36] 2026-02-05 09:06:47,470 | INFO     | log transfer has been attempted: DONE
[2026-02-05 10:15:36] 2026-02-05 09:06:47,470 | INFO     | job 7000017018 has finished - writing final server update
[2026-02-05 10:15:36] 2026-02-05 09:06:47,470 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1707095/.job.ad'
[2026-02-05 10:15:36] 2026-02-05 09:06:47,470 | INFO     | total number of processed events: 400 (read)
[2026-02-05 10:15:36] 2026-02-05 09:06:47,478 | INFO     | using path: /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-7000017018/memory_monitor_summary.json (trf name=prmon)
[2026-02-05 10:15:36] 2026-02-05 09:06:47,479 | INFO     | extracted standard info from prmon json
[2026-02-05 10:15:36] 2026-02-05 09:06:47,479 | INFO     | extracted standard memory fields from prmon json
[2026-02-05 10:15:36] 2026-02-05 09:06:47,479 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-05 10:15:36] 2026-02-05 09:06:47,480 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-05 10:15:36] 2026-02-05 09:06:47,480 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-05 10:15:36] 2026-02-05 09:06:47,485 | INFO     | fitting pss+swap vs Time
[2026-02-05 10:15:36] 2026-02-05 09:06:47,485 | INFO     | sum of square deviations: 4504437945.0
[2026-02-05 10:15:36] 2026-02-05 09:06:47,487 | INFO     | sum of deviations: -10448714277.999989
[2026-02-05 10:15:36] 2026-02-05 09:06:47,488 | INFO     | mean x: 1770274986.5
[2026-02-05 10:15:36] 2026-02-05 09:06:47,488 | INFO     | mean y: 2341268.844262295
[2026-02-05 10:15:36] 2026-02-05 09:06:47,488 | INFO     | intersect: 4108757597.203468
[2026-02-05 10:15:36] 2026-02-05 09:06:47,488 | INFO     | chi2: 2.4309009168043976
[2026-02-05 10:15:36] 2026-02-05 09:06:47,489 | INFO     | sum of square deviations: 4233158440.0
[2026-02-05 10:15:36] 2026-02-05 09:06:47,491 | INFO     | sum of deviations: 6881346986.99999
[2026-02-05 10:15:36] 2026-02-05 09:06:47,491 | INFO     | mean x: 1770274834.0
[2026-02-05 10:15:36] 2026-02-05 09:06:47,491 | INFO     | mean y: 2350850.820083682
[2026-02-05 10:15:36] 2026-02-05 09:06:47,491 | INFO     | intersect: -2875376398.885176
[2026-02-05 10:15:36] 2026-02-05 09:06:47,492 | INFO     | chi2: 1.4374857345131904
[2026-02-05 10:15:36] 2026-02-05 09:06:47,492 | INFO     | current chi2=1.4374857345131904 (change=40.86613219913242 %)
[2026-02-05 10:15:36] 2026-02-05 09:06:47,492 | INFO     | sum of square deviations: 3972995422.5
[2026-02-05 10:15:36] 2026-02-05 09:06:47,494 | INFO     | sum of deviations: 6758433054.499999
[2026-02-05 10:15:36] 2026-02-05 09:06:47,494 | INFO     | mean x: 1770274681.5
[2026-02-05 10:15:36] 2026-02-05 09:06:47,495 | INFO     | mean y: 2350778.705128205
[2026-02-05 10:15:36] 2026-02-05 09:06:47,495 | INFO     | intersect: -3009050355.8739686
[2026-02-05 10:15:36] 2026-02-05 09:06:47,495 | INFO     | chi2: 1.4378506884733122
[2026-02-05 10:15:36] 2026-02-05 09:06:47,495 | INFO     | current chi2=1.4378506884733122 (change=-0.025388353523063623 %)
[2026-02-05 10:15:36] 2026-02-05 09:06:47,495 | INFO     | right removable region: 233
[2026-02-05 10:15:36] 2026-02-05 09:06:47,496 | INFO     | sum of square deviations: 4233158440.0
[2026-02-05 10:15:36] 2026-02-05 09:06:47,498 | INFO     | sum of deviations: -35603555423.0
[2026-02-05 10:15:36] 2026-02-05 09:06:47,498 | INFO     | mean x: 1770275139.0
[2026-02-05 10:15:36] 2026-02-05 09:06:47,498 | INFO     | mean y: 2355202.970711297
[2026-02-05 10:15:36] 2026-02-05 09:06:47,498 | INFO     | intersect: 14891495290.376823
[2026-02-05 10:15:36] 2026-02-05 09:06:47,499 | INFO     | chi2: 1.2162886369302803
[2026-02-05 10:15:36] 2026-02-05 09:06:47,499 | INFO     | current chi2=1.2162886369302803 (change=49.96551983989609 %)
[2026-02-05 10:15:36] 2026-02-05 09:06:47,499 | INFO     | sum of square deviations: 3972995422.5
[2026-02-05 10:15:36] 2026-02-05 09:06:47,501 | INFO     | sum of deviations: -22504376169.5
[2026-02-05 10:15:36] 2026-02-05 09:06:47,502 | INFO     | mean x: 1770275291.5
[2026-02-05 10:15:36] 2026-02-05 09:06:47,502 | INFO     | mean y: 2347519.876068376
[2026-02-05 10:15:36] 2026-02-05 09:06:47,502 | INFO     | intersect: 10029779431.292337
[2026-02-05 10:15:36] 2026-02-05 09:06:47,503 | INFO     | chi2: 1.1229900431098465
[2026-02-05 10:15:36] 2026-02-05 09:06:47,503 | INFO     | current chi2=1.1229900431098465 (change=7.670760951603123 %)
[2026-02-05 10:15:36] 2026-02-05 09:06:47,503 | INFO     | left removable region: 20
[2026-02-05 10:15:36] 2026-02-05 09:06:47,503 | INFO     | sum of square deviations: 2996454322.0
[2026-02-05 10:15:36] 2026-02-05 09:06:47,505 | INFO     | sum of deviations: 3926503753.999999
[2026-02-05 10:15:36] 2026-02-05 09:06:47,505 | INFO     | mean x: 1770275261.0
[2026-02-05 10:15:36] 2026-02-05 09:06:47,505 | INFO     | mean y: 2351439.469483568
[2026-02-05 10:15:36] 2026-02-05 09:06:47,505 | INFO     | intersect: -2317387729.2191787
[2026-02-05 10:15:36] 2026-02-05 09:06:47,506 | INFO     | chi2: 0.002475529096394179
[2026-02-05 10:15:36] 2026-02-05 09:06:47,506 | INFO     | current memory leak: 1.31 B/s (using 213 data points, chi2=0.00)
[2026-02-05 10:15:36] 2026-02-05 09:06:47,507 | INFO     | could have reported an average CPU frequency of 2559 MHz (12 samples)
[2026-02-05 10:15:36] 2026-02-05 09:06:47,507 | INFO     | ..............................
[2026-02-05 10:15:36] 2026-02-05 09:06:47,507 | INFO     | . Timing measurements:
[2026-02-05 10:15:36] 2026-02-05 09:06:47,507 | INFO     | . get job = 0 s
[2026-02-05 10:15:36] 2026-02-05 09:06:47,507 | INFO     | . initial setup = 5 s
[2026-02-05 10:15:36] 2026-02-05 09:06:47,507 | INFO     | . payload setup = 5 s
[2026-02-05 10:15:36] 2026-02-05 09:06:47,508 | INFO     | . stage-in = 0 s
[2026-02-05 10:15:36] 2026-02-05 09:06:47,508 | INFO     | . payload execution = 14827 s
[2026-02-05 10:15:36] 2026-02-05 09:06:47,508 | INFO     | . stage-out = 1 s
[2026-02-05 10:15:36] 2026-02-05 09:06:47,508 | INFO     | . log creation = 0 s
[2026-02-05 10:15:36] 2026-02-05 09:06:47,508 | INFO     | ..............................
[2026-02-05 10:15:36] 2026-02-05 09:06:47,613 | INFO     | 
[2026-02-05 10:15:36] 2026-02-05 09:06:47,613 | INFO     | job summary report
[2026-02-05 10:15:36] 2026-02-05 09:06:47,614 | INFO     | --------------------------------------------------
[2026-02-05 10:15:36] 2026-02-05 09:06:47,614 | INFO     | PanDA job id: 7000017018
[2026-02-05 10:15:36] 2026-02-05 09:06:47,614 | INFO     | task id: 48317892
[2026-02-05 10:15:36] 2026-02-05 09:06:47,614 | INFO     | errors: (none)
[2026-02-05 10:15:36] 2026-02-05 09:06:47,614 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-05 10:15:36] 2026-02-05 09:06:47,614 | INFO     | pilot state: finished 
[2026-02-05 10:15:36] 2026-02-05 09:06:47,614 | INFO     | transexitcode: 0
[2026-02-05 10:15:36] 2026-02-05 09:06:47,614 | INFO     | exeerrorcode: 0
[2026-02-05 10:15:36] 2026-02-05 09:06:47,614 | INFO     | exeerrordiag: 
[2026-02-05 10:15:36] 2026-02-05 09:06:47,614 | INFO     | exitcode: 0
[2026-02-05 10:15:36] 2026-02-05 09:06:47,614 | INFO     | exitmsg: OK
[2026-02-05 10:15:36] 2026-02-05 09:06:47,615 | INFO     | cpuconsumptiontime: 57112 s
[2026-02-05 10:15:36] 2026-02-05 09:06:47,615 | INFO     | nevents: 400
[2026-02-05 10:15:36] 2026-02-05 09:06:47,615 | INFO     | neventsw: 0
[2026-02-05 10:15:36] 2026-02-05 09:06:47,615 | INFO     | pid: 1248573
[2026-02-05 10:15:36] 2026-02-05 09:06:47,615 | INFO     | pgrp: 1248573
[2026-02-05 10:15:36] 2026-02-05 09:06:47,615 | INFO     | corecount: 4
[2026-02-05 10:15:36] 2026-02-05 09:06:47,615 | INFO     | event service: False
[2026-02-05 10:15:36] 2026-02-05 09:06:47,615 | INFO     | sizes: {0: 2277747, 1: 2278264, 12: 2278264, 14836: 2309235, 14838: 2318255, 14841: 2318633}
[2026-02-05 10:15:36] 2026-02-05 09:06:47,615 | INFO     | --------------------------------------------------
[2026-02-05 10:15:36] 2026-02-05 09:06:47,615 | INFO     | 
[2026-02-05 10:15:36] 2026-02-05 09:06:47,615 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2026-02-05 10:15:36] 2026-02-05 09:06:47,635 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-05 10:15:36] 2026-02-05 09:06:47,635 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-05 10:15:36] 2026-02-05 09:06:47,635 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-05 10:15:36] 2026-02-05 09:06:47,635 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-05 10:15:36] 2026-02-05 09:06:47,636 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-05 10:15:36] 2026-02-05 09:06:47,636 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-05 10:15:36] 2026-02-05 09:06:47,636 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-05 10:15:36] 2026-02-05 09:06:47,636 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-05 10:15:36] 2026-02-05 09:06:47,636 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-05 10:15:36] 2026-02-05 09:06:47,636 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-05 10:15:36] 2026-02-05 09:06:47,636 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-05 10:15:36] 2026-02-05 09:06:47,637 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-05 10:15:36] 2026-02-05 09:06:47,637 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-05 10:15:36] 2026-02-05 09:06:47,637 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-05 10:15:36] 2026-02-05 09:06:47,637 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-05 10:15:36] 2026-02-05 09:06:47,637 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-05 10:15:36] 2026-02-05 09:06:47,637 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-05 10:15:36] 2026-02-05 09:06:47,637 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-05 10:15:36] 2026-02-05 09:06:47,638 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-05 10:15:36] 2026-02-05 09:06:47,638 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-05 10:15:36] 2026-02-05 09:06:47,638 | INFO     | job 7000017018 has completed (purged errors)
[2026-02-05 10:15:36] 2026-02-05 09:06:47,638 | INFO     | overall cleanup function is called
[2026-02-05 10:15:36] 2026-02-05 09:06:48,646 | INFO     | --- collectZombieJob: --- 10, [1248573]
[2026-02-05 10:15:36] 2026-02-05 09:06:48,647 | INFO     | zombie collector waiting for pid 1248573
[2026-02-05 10:15:36] 2026-02-05 09:06:48,647 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-05 10:15:36] 2026-02-05 09:06:48,647 | INFO     | collected zombie processes
[2026-02-05 10:15:36] 2026-02-05 09:06:48,647 | INFO     | will attempt to kill all subprocesses of pid=1248573
[2026-02-05 10:15:36] 2026-02-05 09:06:48,997 | INFO     | process IDs to be killed: [1248573] (in reverse order)
[2026-02-05 10:15:36] 2026-02-05 09:06:49,075 | WARNING  | found no corresponding commands to process id(s)
[2026-02-05 10:15:36] 2026-02-05 09:06:49,076 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-05 10:15:36] 2026-02-05 09:06:49,086 | INFO     | did not find any defunct processes belonging to 1248573
[2026-02-05 10:15:36] 2026-02-05 09:06:49,096 | INFO     | did not find any defunct processes belonging to 1248573
[2026-02-05 10:15:36] 2026-02-05 09:06:49,096 | INFO     | ready for new job
[2026-02-05 10:15:36] 2026-02-05 09:06:49,096 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-05 10:15:36] 2026-02-05 09:06:49,099 | INFO     | **************************************
[2026-02-05 10:15:36] 2026-02-05 09:06:49,099 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-05 10:15:36] 2026-02-05 09:06:49,099 | INFO     | **************************************
[2026-02-05 10:15:36] 2026-02-05 09:06:49,099 | INFO     | 
[2026-02-05 10:15:36] 2026-02-05 09:06:49,102 | INFO     | architecture information:
[2026-02-05 10:15:36] 2026-02-05 09:06:49,102 | INFO     | executing command: cat /etc/os-release
[2026-02-05 10:15:36] 2026-02-05 09:06:49,116 | INFO     | cat /etc/os-release:
[2026-02-05 10:15:36] NAME="CentOS Linux"
[2026-02-05 10:15:36] VERSION="7 (Core)"
[2026-02-05 10:15:36] ID="centos"
[2026-02-05 10:15:36] ID_LIKE="rhel fedora"
[2026-02-05 10:15:36] VERSION_ID="7"
[2026-02-05 10:15:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-05 10:15:36] ANSI_COLOR="0;31"
[2026-02-05 10:15:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-05 10:15:36] HOME_URL="https://www.centos.org/"
[2026-02-05 10:15:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-05 10:15:36] 
[2026-02-05 10:15:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-05 10:15:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-05 10:15:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-05 10:15:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-05 10:15:36] 
[2026-02-05 10:15:36] 2026-02-05 09:06:49,116 | INFO     | **************************************
[2026-02-05 10:15:36] 2026-02-05 09:06:49,619 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2026-02-05 10:15:36] 2026-02-05 09:06:49,634 | INFO     | sufficient remaining disk space (1653789949952 B)
[2026-02-05 10:15:36] 2026-02-05 09:06:49,634 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-05 10:15:36] 2026-02-05 09:06:49,634 | INFO     | current server update state: UPDATING_FINAL
[2026-02-05 10:15:36] 2026-02-05 09:06:49,635 | INFO     | update_server=False
[2026-02-05 10:15:36] 2026-02-05 09:06:49,635 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-05 10:15:36] 2026-02-05 09:06:49,635 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-05 10:15:36] 2026-02-05 09:06:49,699 | INFO     | all job control threads have been joined
[2026-02-05 10:15:36] 2026-02-05 09:06:49,797 | INFO     | all data control threads have been joined
[2026-02-05 10:15:36] 2026-02-05 09:06:50,389 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-05 10:15:36] 2026-02-05 09:06:50,390 | INFO     | aborting loop
[2026-02-05 10:15:36] 2026-02-05 09:06:50,637 | INFO     | [job] retrieve thread has finished
[2026-02-05 10:15:36] 2026-02-05 09:06:50,702 | INFO     | all payload control threads have been joined
[2026-02-05 10:15:36] 2026-02-05 09:06:50,704 | INFO     | [job] control thread has finished
[2026-02-05 10:15:36] 2026-02-05 09:06:50,803 | INFO     | [data] control thread has finished
[2026-02-05 10:15:36] 2026-02-05 09:06:50,826 | INFO     | [data] copytool_in thread has finished
[2026-02-05 10:15:36] 2026-02-05 09:06:51,131 | INFO     | [payload] validate_post thread has finished
[2026-02-05 10:15:36] 2026-02-05 09:06:51,211 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-05 10:15:36] 2026-02-05 09:06:51,393 | INFO     | [job] job monitor thread has finished
[2026-02-05 10:15:36] 2026-02-05 09:06:51,641 | INFO     | [data] copytool_out thread has finished
[2026-02-05 10:15:36] 2026-02-05 09:06:51,699 | INFO     | [job] validate thread has finished
[2026-02-05 10:15:36] 2026-02-05 09:06:51,707 | INFO     | [payload] control thread has finished
[2026-02-05 10:15:36] 2026-02-05 09:06:51,761 | INFO     | [payload] validate_pre thread has finished
[2026-02-05 10:15:36] 2026-02-05 09:06:51,983 | INFO     | [job] create_data_payload thread has finished
[2026-02-05 10:15:36] 2026-02-05 09:06:51,983 | INFO     | [payload] execute_payloads thread has finished
[2026-02-05 10:15:36] 2026-02-05 09:06:52,233 | INFO     | [payload] failed_post thread has finished
[2026-02-05 10:15:36] 2026-02-05 09:06:52,624 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-05 10:15:36] 2026-02-05 09:06:53,077 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-05 10:15:36] 2026-02-05 09:06:53,629 | INFO     | [job] queue monitor thread has finished
[2026-02-05 10:15:36] 2026-02-05 09:06:57,082 | INFO     | [data] queue_monitor thread has finished
[2026-02-05 10:15:36] 2026-02-05 09:07:21,196 | INFO     | PID=1243898 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-05 10:15:36] 2026-02-05 09:07:21,196 | INFO     | .. there are 2 such processes running
[2026-02-05 10:15:36] 2026-02-05 09:07:21,197 | INFO     | found 0 job(s) in 20 queues
[2026-02-05 10:15:36] 2026-02-05 09:07:21,197 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-05 10:15:36] 2026-02-05 09:07:21,197 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-05 10:15:36] 2026-02-05 09:07:37,837 | INFO     | [monitor] cgroup control has ended
[2026-02-05 10:15:36] 2026-02-05 09:07:37,979 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23368345474880)>', '<ExcThread(monitor, started 23367902017280)>']
[2026-02-05 10:15:36] 2026-02-05 09:07:38,261 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-05 10:15:36] 2026-02-05 09:07:38,262 | INFO     | [monitor] control thread has ended
[2026-02-05 10:15:36] 2026-02-05 09:07:43,004 | INFO     | all workflow threads have been joined
[2026-02-05 10:15:36] 2026-02-05 09:07:43,005 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-05 10:15:36] 2026-02-05 09:07:43,005 | INFO     | traces error code: 0
[2026-02-05 10:15:36] 2026-02-05 09:07:43,005 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-05 10:15:36] 2026-02-05 09:07:43,136 [wrapper] ==== pilot stdout END ====
[2026-02-05 10:15:36] 2026-02-05 09:07:43,139 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-05 10:15:36] 2026-02-05 09:07:43,141 [wrapper] pilotpid: 1243898
[2026-02-05 10:15:36] 2026-02-05 09:07:43,144 [wrapper] Pilot exit status: 0
[2026-02-05 10:15:36] 2026-02-05 09:07:43,154 [wrapper] pandaids: 7000017018
[2026-02-05 10:15:36] 2026-02-05 09:07:43,213 [wrapper] cleanup supervisor_pilot 1374288 1243899
[2026-02-05 10:15:36] 2026-02-05 09:07:43,216 [wrapper] Test setup, not cleaning
[2026-02-05 10:15:36] 2026-02-05 09:07:43,219 [wrapper] apfmon messages muted
[2026-02-05 10:15:36] 2026-02-05 09:07:43,221 [wrapper] ==== wrapper stdout END ====
[2026-02-05 10:15:36] 2026-02-05 09:07:43,223 [wrapper] ==== wrapper stderr END ====
[2026-02-05 10:15:36]  *** Error codes and diagnostics ***
[2026-02-05 10:15:36]     "exeErrorCode": 0,
[2026-02-05 10:15:36]     "exeErrorDiag": "",
[2026-02-05 10:15:36]     "pilotErrorCode": 0,
[2026-02-05 10:15:36]     "pilotErrorDiag": "",
[2026-02-05 10:15:36]  *** Listing of results directory ***
[2026-02-05 10:15:36] total 684668
[2026-02-05 10:15:36] -rw-r--r-- 1 boinc boinc    584422 Feb  3 18:17 pilot3.tar.gz
[2026-02-05 10:15:36] -rwx------ 1 boinc boinc     36322 Feb  3 18:19 runpilot2-wrapper.sh
[2026-02-05 10:15:36] -rw-r--r-- 1 boinc boinc      5111 Feb  3 18:23 queuedata.json
[2026-02-05 10:15:36] -rw-r--r-- 1 boinc boinc       100 Feb  5 05:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-05 10:15:36] -rwxr-xr-x 1 boinc boinc      7986 Feb  5 05:58 run_atlas
[2026-02-05 10:15:36] -rw-r--r-- 1 boinc boinc       105 Feb  5 05:58 job.xml
[2026-02-05 10:15:36] -rw-r--r-- 2 boinc boinc 501530670 Feb  5 05:58 EVNT.48317889._000239.pool.root.1
[2026-02-05 10:15:36] -rw-r--r-- 1 boinc boinc      6426 Feb  5 05:58 init_data.xml
[2026-02-05 10:15:36] drwxrwx--x 2 boinc boinc      4096 Feb  5 05:58 shared
[2026-02-05 10:15:36] -rw-r--r-- 2 boinc boinc    597758 Feb  5 05:58 input.tar.gz
[2026-02-05 10:15:36] -rw-r--r-- 2 boinc boinc     15845 Feb  5 05:58 start_atlas.sh
[2026-02-05 10:15:36] -rw-r--r-- 1 boinc boinc         0 Feb  5 05:58 boinc_lockfile
[2026-02-05 10:15:36] -rw-r--r-- 1 boinc boinc      2523 Feb  5 05:58 pandaJob.out
[2026-02-05 10:15:36] -rw------- 1 boinc boinc   1009544 Feb  5 05:59 agis_schedconf.cvmfs.json
[2026-02-05 10:15:36] -rw------- 1 boinc boinc       454 Feb  5 05:59 workernode_map.json
[2026-02-05 10:15:36] drwx------ 5 boinc boinc      4096 Feb  5 05:59 pilot3
[2026-02-05 10:15:36] -rw------- 1 boinc boinc 190543766 Feb  5 10:06 HITS.48317892._012556.pool.root.1
[2026-02-05 10:15:36] -rw-r--r-- 1 boinc boinc       529 Feb  5 10:06 boinc_task_state.xml
[2026-02-05 10:15:36] -rw------- 1 boinc boinc      1037 Feb  5 10:06 memory_monitor_summary.json
[2026-02-05 10:15:36] -rw------- 1 boinc boinc   1511668 Feb  5 10:06 agis_ddmendpoints.agis.ALL.json
[2026-02-05 10:15:36] -rw------- 1 boinc boinc    441822 Feb  5 10:06 log.48317892._012556.job.log.tgz.1
[2026-02-05 10:15:36] -rw------- 1 boinc boinc        95 Feb  5 10:06 pilot_heartbeat.json
[2026-02-05 10:15:36] -rw------- 1 boinc boinc      6407 Feb  5 10:06 heartbeat.json
[2026-02-05 10:15:36] -rw------- 1 boinc boinc      4830 Feb  5 10:07 pilotlog.txt
[2026-02-05 10:15:36] -rw------- 1 boinc boinc   2104372 Feb  5 10:07 log.48317892._012556.job.log.1
[2026-02-05 10:15:36] -rw------- 1 boinc boinc       357 Feb  5 10:07 output.list
[2026-02-05 10:15:36] -rw-r--r-- 1 boinc boinc       620 Feb  5 10:07 runtime_log
[2026-02-05 10:15:36] -rw------- 1 boinc boinc   2560000 Feb  5 10:07 result.tar.gz
[2026-02-05 10:15:36] -rw-r--r-- 1 boinc boinc      9205 Feb  5 10:07 runtime_log.err
[2026-02-05 10:15:36] -rw------- 1 boinc boinc       666 Feb  5 10:07 31ONDmSEZ78n9Rq4apOajLDm4fhM0noT9bVooX4SDm8DVKDmcsZAin.diag
[2026-02-05 10:15:36] -rw-r--r-- 1 boinc boinc        26 Feb  5 10:15 wrapper_checkpoint.txt
[2026-02-05 10:15:36] -rw-r--r-- 1 boinc boinc      8192 Feb  5 10:15 boinc_mmap_file
[2026-02-05 10:15:36] -rw-r--r-- 1 boinc boinc     20883 Feb  5 10:15 stderr.txt
[2026-02-05 10:15:36] HITS file was successfully produced:
[2026-02-05 10:15:36] -rw------- 1 boinc boinc 190543766 Feb  5 10:06 shared/HITS.pool.root.1
[2026-02-05 10:15:36]  *** Contents of shared directory: ***
[2026-02-05 10:15:36] total 678964
[2026-02-05 10:15:36] -rw-r--r-- 2 boinc boinc 501530670 Feb  5 05:58 ATLAS.root_0
[2026-02-05 10:15:36] -rw-r--r-- 2 boinc boinc    597758 Feb  5 05:58 input.tar.gz
[2026-02-05 10:15:36] -rw-r--r-- 2 boinc boinc     15845 Feb  5 05:58 start_atlas.sh
[2026-02-05 10:15:36] -rw------- 1 boinc boinc 190543766 Feb  5 10:06 HITS.pool.root.1
[2026-02-05 10:15:36] -rw------- 1 boinc boinc   2560000 Feb  5 10:07 result.tar.gz
10:15:37 (1239470): run_atlas exited; CPU time 57707.710394
10:15:37 (1239470): called boinc_finish(0)

</stderr_txt>
]]>

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