Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
23:11:18 (335340): wrapper (7.7.26015): starting
23:11:18 (335340): wrapper: running run_atlas (--nthreads 3)
[2026-02-03 23:11:18] Arguments: --nthreads 3
[2026-02-03 23:11:18] Threads: 3
[2026-02-03 23:11:18] Checking for CVMFS
[2026-02-03 23:11:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-03 23:11:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-03 23:11:21] Running cvmfs_config stat atlas.cern.ch
[2026-02-03 23:11:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-03 23:11:22] 2.13.3.0 335550 0 29768 155845 4 1 6633232 8388608 0 130560 0 0 0.000 1336 884 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-02-03 23:11:22] CVMFS is ok
[2026-02-03 23:11:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-03 23:11:22] Small home clusters do not require a local http proxy but it is suggested if
[2026-02-03 23:11:22] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-02-03 23:11:22] Further information can be found at the LHC@home message board.
[2026-02-03 23:11:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 23:11:22] Checking for apptainer binary...
[2026-02-03 23:11:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-03 23:11:22] Running /usr/bin/apptainer --version
[2026-02-03 23:11:22] apptainer version 1.4.3
[2026-02-03 23:11:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 23:11:22] debian-e15
[2026-02-03 23:11:22] apptainer works
[2026-02-03 23:11:22] Set ATHENA_PROC_NUMBER=3
[2026-02-03 23:11:22] Set ATHENA_CORE_NUMBER=3
[2026-02-03 23:11:22] Starting ATLAS job with PandaID=6999842506
[2026-02-03 23:11:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 00:58:58]  *** The last 200 lines of the pilot log: ***
[2026-02-04 00:58:58] 2026-02-03 23:58:11,835 | INFO     | mean y: 2331275.019047619
[2026-02-04 00:58:58] 2026-02-03 23:58:11,835 | INFO     | intersect: -35954169524.32675
[2026-02-04 00:58:58] 2026-02-03 23:58:11,835 | INFO     | chi2: 1.0870799587642093
[2026-02-04 00:58:58] 2026-02-03 23:58:11,835 | INFO     | sum of square deviations: 310052325.0
[2026-02-04 00:58:58] 2026-02-03 23:58:11,836 | INFO     | sum of deviations: 6855416893.499999
[2026-02-04 00:58:58] 2026-02-03 23:58:11,836 | INFO     | mean x: 1770159742.5
[2026-02-04 00:58:58] 2026-02-03 23:58:11,836 | INFO     | mean y: 2329915.77
[2026-02-04 00:58:58] 2026-02-03 23:58:11,836 | INFO     | intersect: -39136815397.61576
[2026-02-04 00:58:58] 2026-02-03 23:58:11,836 | INFO     | chi2: 1.0890558031157849
[2026-02-04 00:58:58] 2026-02-03 23:58:11,836 | INFO     | current chi2=1.0890558031157849 (change=-0.18175703964055626 %)
[2026-02-04 00:58:58] 2026-02-03 23:58:11,836 | INFO     | right removable region: 99
[2026-02-04 00:58:58] 2026-02-03 23:58:11,836 | INFO     | sum of square deviations: 310052325.0
[2026-02-04 00:58:58] 2026-02-03 23:58:11,836 | INFO     | sum of deviations: 830119110.0
[2026-02-04 00:58:58] 2026-02-03 23:58:11,836 | INFO     | mean x: 1770160047.5
[2026-02-04 00:58:58] 2026-02-03 23:58:11,836 | INFO     | mean y: 2350482.72
[2026-02-04 00:58:58] 2026-02-03 23:58:11,836 | INFO     | intersect: -4736990475.901283
[2026-02-04 00:58:58] 2026-02-03 23:58:11,836 | INFO     | chi2: 0.002240136591668332
[2026-02-04 00:58:58] 2026-02-03 23:58:11,836 | INFO     | current chi2=0.002240136591668332 (change=99.79393083520598 %)
[2026-02-04 00:58:58] 2026-02-03 23:58:11,836 | INFO     | sum of square deviations: 265828240.0
[2026-02-04 00:58:58] 2026-02-03 23:58:11,837 | INFO     | sum of deviations: 308771142.00000024
[2026-02-04 00:58:58] 2026-02-03 23:58:11,837 | INFO     | mean x: 1770160200.0
[2026-02-04 00:58:58] 2026-02-03 23:58:11,837 | INFO     | mean y: 2352275.2421052633
[2026-02-04 00:58:58] 2026-02-03 23:58:11,837 | INFO     | intersect: -2053766316.510783
[2026-02-04 00:58:58] 2026-02-03 23:58:11,837 | INFO     | chi2: 0.0014459327313586557
[2026-02-04 00:58:58] 2026-02-03 23:58:11,837 | INFO     | current chi2=0.0014459327313586557 (change=35.45336758765217 %)
[2026-02-04 00:58:58] 2026-02-03 23:58:11,837 | INFO     | sum of square deviations: 226022842.5
[2026-02-04 00:58:58] 2026-02-03 23:58:11,837 | INFO     | sum of deviations: 24473688.000000004
[2026-02-04 00:58:58] 2026-02-03 23:58:11,837 | INFO     | mean x: 1770160352.5
[2026-02-04 00:58:58] 2026-02-03 23:58:11,837 | INFO     | mean y: 2353357.111111111
[2026-02-04 00:58:58] 2026-02-03 23:58:11,837 | INFO     | intersect: -189319093.76984367
[2026-02-04 00:58:58] 2026-02-03 23:58:11,837 | INFO     | chi2: 0.001118360541251576
[2026-02-04 00:58:58] 2026-02-03 23:58:11,837 | INFO     | current chi2=0.001118360541251576 (change=22.65473234009164 %)
[2026-02-04 00:58:58] 2026-02-03 23:58:11,837 | INFO     | left removable region: 30
[2026-02-04 00:58:58] 2026-02-03 23:58:11,837 | INFO     | sum of square deviations: 101843770.0
[2026-02-04 00:58:58] 2026-02-03 23:58:11,838 | INFO     | sum of deviations: -401849273.0
[2026-02-04 00:58:58] 2026-02-03 23:58:11,838 | INFO     | mean x: 1770160627.0
[2026-02-04 00:58:58] 2026-02-03 23:58:11,838 | INFO     | mean y: 2354823.434782609
[2026-02-04 00:58:58] 2026-02-03 23:58:11,838 | INFO     | intersect: 6986952517.070576
[2026-02-04 00:58:58] 2026-02-03 23:58:11,838 | INFO     | chi2: 0.0004782853169741731
[2026-02-04 00:58:58] 2026-02-03 23:58:11,838 | INFO     | current memory leak: -3.95 B/s (using 69 data points, chi2=0.00)
[2026-02-04 00:58:58] 2026-02-03 23:58:11,838 | INFO     | could have reported an average CPU frequency of 2004 MHz (7 samples)
[2026-02-04 00:58:58] 2026-02-03 23:58:11,838 | INFO     | ..............................
[2026-02-04 00:58:58] 2026-02-03 23:58:11,838 | INFO     | . Timing measurements:
[2026-02-04 00:58:58] 2026-02-03 23:58:11,838 | INFO     | . get job = 0 s
[2026-02-04 00:58:58] 2026-02-03 23:58:11,838 | INFO     | . initial setup = 4 s
[2026-02-04 00:58:58] 2026-02-03 23:58:11,838 | INFO     | . payload setup = 4 s
[2026-02-04 00:58:58] 2026-02-03 23:58:11,838 | INFO     | . stage-in = 0 s
[2026-02-04 00:58:58] 2026-02-03 23:58:11,838 | INFO     | . payload execution = 6366 s
[2026-02-04 00:58:58] 2026-02-03 23:58:11,838 | INFO     | . stage-out = 0 s
[2026-02-04 00:58:58] 2026-02-03 23:58:11,838 | INFO     | . log creation = 0 s
[2026-02-04 00:58:58] 2026-02-03 23:58:11,838 | INFO     | ..............................
[2026-02-04 00:58:58] 2026-02-03 23:58:11,839 | INFO     | time since job start (6387s) is within the limit (349056.0s)
[2026-02-04 00:58:58] 2026-02-03 23:58:11,919 | INFO     | 
[2026-02-04 00:58:58] 2026-02-03 23:58:11,919 | INFO     | job summary report
[2026-02-04 00:58:58] 2026-02-03 23:58:11,919 | INFO     | --------------------------------------------------
[2026-02-04 00:58:58] 2026-02-03 23:58:11,919 | INFO     | PanDA job id: 6999842506
[2026-02-04 00:58:58] 2026-02-03 23:58:11,919 | INFO     | task id: 48317892
[2026-02-04 00:58:58] 2026-02-03 23:58:11,919 | INFO     | errors: (none)
[2026-02-04 00:58:58] 2026-02-03 23:58:11,919 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 00:58:58] 2026-02-03 23:58:11,920 | INFO     | pilot state: finished 
[2026-02-04 00:58:58] 2026-02-03 23:58:11,920 | INFO     | transexitcode: 0
[2026-02-04 00:58:58] 2026-02-03 23:58:11,920 | INFO     | exeerrorcode: 0
[2026-02-04 00:58:58] 2026-02-03 23:58:11,920 | INFO     | exeerrordiag: 
[2026-02-04 00:58:58] 2026-02-03 23:58:11,920 | INFO     | exitcode: 0
[2026-02-04 00:58:58] 2026-02-03 23:58:11,920 | INFO     | exitmsg: OK
[2026-02-04 00:58:58] 2026-02-03 23:58:11,920 | INFO     | cpuconsumptiontime: 18676 s
[2026-02-04 00:58:58] 2026-02-03 23:58:11,920 | INFO     | nevents: 400
[2026-02-04 00:58:58] 2026-02-03 23:58:11,920 | INFO     | neventsw: 0
[2026-02-04 00:58:58] 2026-02-03 23:58:11,920 | INFO     | pid: 344200
[2026-02-04 00:58:58] 2026-02-03 23:58:11,920 | INFO     | pgrp: 344200
[2026-02-04 00:58:58] 2026-02-03 23:58:11,920 | INFO     | corecount: 3
[2026-02-04 00:58:58] 2026-02-03 23:58:11,920 | INFO     | event service: False
[2026-02-04 00:58:58] 2026-02-03 23:58:11,920 | INFO     | sizes: {0: 2278230, 11: 2278230, 6374: 2305419, 6375: 2314431, 6376: 2314681}
[2026-02-04 00:58:58] 2026-02-03 23:58:11,920 | INFO     | --------------------------------------------------
[2026-02-04 00:58:58] 2026-02-03 23:58:11,920 | INFO     | 
[2026-02-04 00:58:58] 2026-02-03 23:58:11,920 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2026-02-04 00:58:58] 2026-02-03 23:58:11,934 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 00:58:58] 2026-02-03 23:58:11,935 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 00:58:58] 2026-02-03 23:58:11,935 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 00:58:58] 2026-02-03 23:58:11,935 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 00:58:58] 2026-02-03 23:58:11,935 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 00:58:58] 2026-02-03 23:58:11,935 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 00:58:58] 2026-02-03 23:58:11,935 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 00:58:58] 2026-02-03 23:58:11,935 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 00:58:58] 2026-02-03 23:58:11,935 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 00:58:58] 2026-02-03 23:58:11,935 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 00:58:58] 2026-02-03 23:58:11,935 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 00:58:58] 2026-02-03 23:58:11,936 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 00:58:58] 2026-02-03 23:58:11,936 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 00:58:58] 2026-02-03 23:58:11,936 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 00:58:58] 2026-02-03 23:58:11,936 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 00:58:58] 2026-02-03 23:58:11,936 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 00:58:58] 2026-02-03 23:58:11,936 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 00:58:58] 2026-02-03 23:58:11,936 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 00:58:58] 2026-02-03 23:58:11,936 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 00:58:58] 2026-02-03 23:58:11,936 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 00:58:58] 2026-02-03 23:58:11,936 | INFO     | job 6999842506 has completed (purged errors)
[2026-02-04 00:58:58] 2026-02-03 23:58:11,936 | INFO     | overall cleanup function is called
[2026-02-04 00:58:58] 2026-02-03 23:58:12,939 | INFO     | --- collectZombieJob: --- 10, [344200]
[2026-02-04 00:58:58] 2026-02-03 23:58:12,939 | INFO     | zombie collector waiting for pid 344200
[2026-02-04 00:58:58] 2026-02-03 23:58:12,940 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 00:58:58] 2026-02-03 23:58:12,940 | INFO     | collected zombie processes
[2026-02-04 00:58:58] 2026-02-03 23:58:12,940 | INFO     | will attempt to kill all subprocesses of pid=344200
[2026-02-04 00:58:58] 2026-02-03 23:58:12,983 | INFO     | process IDs to be killed: [344200] (in reverse order)
[2026-02-04 00:58:58] 2026-02-03 23:58:13,014 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 00:58:58] 2026-02-03 23:58:13,014 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 00:58:58] 2026-02-03 23:58:13,016 | INFO     | did not find any defunct processes belonging to 344200
[2026-02-04 00:58:58] 2026-02-03 23:58:13,017 | INFO     | did not find any defunct processes belonging to 344200
[2026-02-04 00:58:58] 2026-02-03 23:58:13,017 | INFO     | ready for new job
[2026-02-04 00:58:58] 2026-02-03 23:58:13,017 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 00:58:58] 2026-02-03 23:58:13,018 | INFO     | **************************************
[2026-02-04 00:58:58] 2026-02-03 23:58:13,018 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 00:58:58] 2026-02-03 23:58:13,018 | INFO     | **************************************
[2026-02-04 00:58:58] 2026-02-03 23:58:13,018 | INFO     | 
[2026-02-04 00:58:58] 2026-02-03 23:58:13,019 | INFO     | architecture information:
[2026-02-04 00:58:58] 2026-02-03 23:58:13,019 | INFO     | executing command: cat /etc/os-release
[2026-02-04 00:58:58] 2026-02-03 23:58:13,029 | INFO     | cat /etc/os-release:
[2026-02-04 00:58:58] NAME="CentOS Linux"
[2026-02-04 00:58:58] VERSION="7 (Core)"
[2026-02-04 00:58:58] ID="centos"
[2026-02-04 00:58:58] ID_LIKE="rhel fedora"
[2026-02-04 00:58:58] VERSION_ID="7"
[2026-02-04 00:58:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 00:58:58] ANSI_COLOR="0;31"
[2026-02-04 00:58:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 00:58:58] HOME_URL="https://www.centos.org/"
[2026-02-04 00:58:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 00:58:58] 
[2026-02-04 00:58:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 00:58:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 00:58:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 00:58:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 00:58:58] 
[2026-02-04 00:58:58] 2026-02-03 23:58:13,029 | INFO     | **************************************
[2026-02-04 00:58:58] 2026-02-03 23:58:13,532 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2026-02-04 00:58:58] 2026-02-03 23:58:13,543 | INFO     | sufficient remaining disk space (125919297536 B)
[2026-02-04 00:58:58] 2026-02-03 23:58:13,543 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 00:58:58] 2026-02-03 23:58:13,543 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 00:58:58] 2026-02-03 23:58:13,543 | INFO     | update_server=False
[2026-02-04 00:58:58] 2026-02-03 23:58:13,543 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 00:58:58] 2026-02-03 23:58:13,543 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 00:58:58] 2026-02-03 23:58:13,544 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 00:58:58] 2026-02-03 23:58:13,544 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-02-04 00:58:58] 2026-02-03 23:58:13,544 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 00:58:58] 2026-02-03 23:58:13,544 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 00:58:58] 2026-02-03 23:58:13,545 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 00:58:58] 2026-02-03 23:58:13,545 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 00:58:58] 2026-02-03 23:58:14,093 | INFO     | all payload control threads have been joined
[2026-02-04 00:58:58] 2026-02-03 23:58:14,314 | INFO     | all job control threads have been joined
[2026-02-04 00:58:58] 2026-02-03 23:58:14,548 | INFO     | [job] retrieve thread has finished
[2026-02-04 00:58:58] 2026-02-03 23:58:14,548 | INFO     | [job] queue monitor thread has finished
[2026-02-04 00:58:58] 2026-02-03 23:58:14,641 | INFO     | all data control threads have been joined
[2026-02-04 00:58:58] 2026-02-03 23:58:14,657 | INFO     | [payload] failed_post thread has finished
[2026-02-04 00:58:58] 2026-02-03 23:58:14,798 | INFO     | job.realtimelogging is not enabled
[2026-02-04 00:58:58] 2026-02-03 23:58:14,821 | INFO     | [data] copytool_in thread has finished
[2026-02-04 00:58:58] 2026-02-03 23:58:15,099 | INFO     | [payload] control thread has finished
[2026-02-04 00:58:58] 2026-02-03 23:58:15,317 | INFO     | [job] control thread has finished
[2026-02-04 00:58:58] 2026-02-03 23:58:15,551 | INFO     | [data] copytool_out thread has finished
[2026-02-04 00:58:58] 2026-02-03 23:58:15,551 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 00:58:58] 2026-02-03 23:58:15,647 | INFO     | [data] control thread has finished
[2026-02-04 00:58:58] 2026-02-03 23:58:15,663 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 00:58:58] 2026-02-03 23:58:15,803 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 00:58:58] 2026-02-03 23:58:15,845 | WARNING  | process 344200 can no longer be monitored (due to stat problems) - aborting
[2026-02-04 00:58:58] 2026-02-03 23:58:15,879 | INFO     | using path: /var/lib/boinc-client/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 00:58:58] 2026-02-03 23:58:15,880 | INFO     | using path: /var/lib/boinc-client/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 00:58:58] 2026-02-03 23:58:15,880 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-02-04 00:58:58] 2026-02-03 23:58:15,880 | WARNING  | maxPSS not found in memory monitor output
[2026-02-04 00:58:58] 2026-02-03 23:58:15,880 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc-client/slots/0/PanDA_Pilot-6999842506/payload.stdout) since it has not been created yet
[2026-02-04 00:58:58] 2026-02-03 23:58:15,880 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2026-02-04 00:58:58] 2026-02-03 23:58:15,887 | INFO     | [payload] validate_post thread has finished
[2026-02-04 00:58:58] 2026-02-03 23:58:15,891 | INFO     | sufficient remaining disk space (125919297536 B)
[2026-02-04 00:58:58] 2026-02-03 23:58:15,891 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-02-04 00:58:58] 2026-02-03 23:58:15,891 | INFO     | output file size check: skipping output file /var/lib/boinc-client/slots/0/PanDA_Pilot-6999842506/HITS.48317892._011120.pool.root.1 since it does not exist
[2026-02-04 00:58:58] 2026-02-03 23:58:15,925 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 00:58:58] 2026-02-03 23:58:15,935 | INFO     | number of running child processes to parent process 344200: 1
[2026-02-04 00:58:58] 2026-02-03 23:58:15,936 | INFO     | maximum number of monitored processes: 6
[2026-02-04 00:58:58] 2026-02-03 23:58:15,936 | INFO     | aborting job monitoring since job object (job id=6999842506) has expired
[2026-02-04 00:58:58] 2026-02-03 23:58:15,936 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 00:58:58] 2026-02-03 23:58:15,936 | INFO     | will abort loop
[2026-02-04 00:58:58] 2026-02-03 23:58:15,961 | INFO     | [job] validate thread has finished
[2026-02-04 00:58:58] 2026-02-03 23:58:16,939 | INFO     | [job] job monitor thread has finished
[2026-02-04 00:58:58] 2026-02-03 23:58:17,547 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 00:58:58] 2026-02-03 23:58:52,396 | INFO     | [monitor] cgroup control has ended
[2026-02-04 00:58:58] 2026-02-03 23:58:53,493 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139802515101504)>', '<ExcThread(monitor, started 139801630066432)>']
[2026-02-04 00:58:58] 2026-02-03 23:58:53,746 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 00:58:58] 2026-02-03 23:58:53,746 | INFO     | [monitor] control thread has ended
[2026-02-04 00:58:58] 2026-02-03 23:58:58,519 | INFO     | all workflow threads have been joined
[2026-02-04 00:58:58] 2026-02-03 23:58:58,519 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 00:58:58] 2026-02-03 23:58:58,520 | INFO     | traces error code: 0
[2026-02-04 00:58:58] 2026-02-03 23:58:58,520 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 00:58:58] 2026-02-03 23:58:58,592 [wrapper] ==== pilot stdout END ====
[2026-02-04 00:58:58] 2026-02-03 23:58:58,595 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 00:58:58] 2026-02-03 23:58:58,599 [wrapper] pilotpid: 339704
[2026-02-04 00:58:58] 2026-02-03 23:58:58,601 [wrapper] Pilot exit status: 0
[2026-02-04 00:58:58] 2026-02-03 23:58:58,608 [wrapper] pandaids: 6999842506
[2026-02-04 00:58:58] 2026-02-03 23:58:58,628 [wrapper] cleanup supervisor_pilot  350165 339705
[2026-02-04 00:58:58] 2026-02-03 23:58:58,630 [wrapper] Test setup, not cleaning
[2026-02-04 00:58:58] 2026-02-03 23:58:58,633 [wrapper] apfmon messages muted
[2026-02-04 00:58:58] 2026-02-03 23:58:58,635 [wrapper] ==== wrapper stdout END ====
[2026-02-04 00:58:58] 2026-02-03 23:58:58,637 [wrapper] ==== wrapper stderr END ====
[2026-02-04 00:58:58]  *** Error codes and diagnostics ***
[2026-02-04 00:58:58]     "exeErrorCode": 0,
[2026-02-04 00:58:58]     "exeErrorDiag": "",
[2026-02-04 00:58:58]     "pilotErrorCode": 0,
[2026-02-04 00:58:58]     "pilotErrorDiag": "",
[2026-02-04 00:58:58]  *** Listing of results directory ***
[2026-02-04 00:58:58] total 668028
[2026-02-04 00:58:58] -rw-r--r-- 1 boinc boinc    584422 Feb  3 18:17 pilot3.tar.gz
[2026-02-04 00:58:58] -rwx------ 1 boinc boinc     36322 Feb  3 18:18 runpilot2-wrapper.sh
[2026-02-04 00:58:58] -rw-r--r-- 1 boinc boinc      5111 Feb  3 18:21 queuedata.json
[2026-02-04 00:58:58] -rw-r--r-- 1 boinc boinc       100 Feb  3 23:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 00:58:58] -rwxr-xr-x 1 boinc boinc      7986 Feb  3 23:11 run_atlas
[2026-02-04 00:58:58] -rw-r--r-- 1 boinc boinc       105 Feb  3 23:11 job.xml
[2026-02-04 00:58:58] -rw-r--r-- 2 boinc boinc     15845 Feb  3 23:11 start_atlas.sh
[2026-02-04 00:58:58] drwxrwx--x 2 boinc boinc      4096 Feb  3 23:11 shared
[2026-02-04 00:58:58] -rw-r--r-- 2 boinc boinc    597761 Feb  3 23:11 input.tar.gz
[2026-02-04 00:58:58] -rw-r--r-- 1 boinc boinc      6671 Feb  3 23:11 init_data.xml
[2026-02-04 00:58:58] -rw-r--r-- 2 boinc boinc 492398663 Feb  3 23:11 EVNT.48317889._000211.pool.root.1
[2026-02-04 00:58:58] -rw-r--r-- 1 boinc boinc         0 Feb  3 23:11 boinc_setup_complete
[2026-02-04 00:58:58] -rw-r--r-- 1 boinc boinc         0 Feb  3 23:11 boinc_lockfile
[2026-02-04 00:58:58] -rw-r--r-- 1 boinc boinc      2522 Feb  3 23:11 pandaJob.out
[2026-02-04 00:58:58] -rw------- 1 boinc boinc   1009252 Feb  3 23:11 agis_schedconf.cvmfs.json
[2026-02-04 00:58:58] -rw------- 1 boinc boinc   1511668 Feb  3 23:11 agis_ddmendpoints.agis.ALL.json
[2026-02-04 00:58:58] -rw------- 1 boinc boinc       427 Feb  3 23:11 workernode_map.json
[2026-02-04 00:58:58] drwx------ 5 boinc boinc      4096 Feb  3 23:11 pilot3
[2026-02-04 00:58:58] -rw------- 1 boinc boinc        95 Feb  4 00:57 pilot_heartbeat.json
[2026-02-04 00:58:58] -rw------- 1 boinc boinc 185342490 Feb  4 00:57 HITS.48317892._011120.pool.root.1
[2026-02-04 00:58:58] -rw-r--r-- 1 boinc boinc       530 Feb  4 00:58 boinc_task_state.xml
[2026-02-04 00:58:58] -rw------- 1 boinc boinc      1029 Feb  4 00:58 memory_monitor_summary.json
[2026-02-04 00:58:58] -rw------- 1 boinc boinc    263819 Feb  4 00:58 log.48317892._011120.job.log.tgz.1
[2026-02-04 00:58:58] -rw------- 1 boinc boinc      6328 Feb  4 00:58 heartbeat.json
[2026-02-04 00:58:58] -rw-r--r-- 1 boinc boinc      8192 Feb  4 00:58 boinc_mmap_file
[2026-02-04 00:58:58] -rw-r--r-- 1 boinc boinc        27 Feb  4 00:58 wrapper_checkpoint.txt
[2026-02-04 00:58:58] -rw------- 1 boinc boinc      6147 Feb  4 00:58 pilotlog.txt
[2026-02-04 00:58:58] -rw------- 1 boinc boinc    924975 Feb  4 00:58 log.48317892._011120.job.log.1
[2026-02-04 00:58:58] -rw------- 1 boinc boinc       357 Feb  4 00:58 output.list
[2026-02-04 00:58:58] -rw-r--r-- 1 boinc boinc       620 Feb  4 00:58 runtime_log
[2026-02-04 00:58:58] -rw------- 1 boinc boinc   1208320 Feb  4 00:58 result.tar.gz
[2026-02-04 00:58:58] -rw-r--r-- 1 boinc boinc      8900 Feb  4 00:58 runtime_log.err
[2026-02-04 00:58:58] -rw------- 1 boinc boinc       645 Feb  4 00:58 IhvNDmnDZ78nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmTZVKDmKGYJcn.diag
[2026-02-04 00:58:58] -rw-r--r-- 1 boinc boinc     21427 Feb  4 00:58 stderr.txt
[2026-02-04 00:58:58] HITS file was successfully produced:
[2026-02-04 00:58:58] -rw------- 1 boinc boinc 185342490 Feb  4 00:57 shared/HITS.pool.root.1
[2026-02-04 00:58:58]  *** Contents of shared directory: ***
[2026-02-04 00:58:58] total 663648
[2026-02-04 00:58:58] -rw-r--r-- 2 boinc boinc     15845 Feb  3 23:11 start_atlas.sh
[2026-02-04 00:58:58] -rw-r--r-- 2 boinc boinc    597761 Feb  3 23:11 input.tar.gz
[2026-02-04 00:58:58] -rw-r--r-- 2 boinc boinc 492398663 Feb  3 23:11 ATLAS.root_0
[2026-02-04 00:58:58] -rw------- 1 boinc boinc 185342490 Feb  4 00:57 HITS.pool.root.1
[2026-02-04 00:58:58] -rw------- 1 boinc boinc   1208320 Feb  4 00:58 result.tar.gz
00:59:00 (335340): run_atlas exited; CPU time 18717.068209
00:59:00 (335340): called boinc_finish(0)

</stderr_txt>
]]>

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