Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:59:27 (28559): wrapper (7.7.26015): starting
19:59:27 (28559): wrapper: running run_atlas (--nthreads 6)
[2026-02-04 19:59:27] Arguments: --nthreads 6
[2026-02-04 19:59:27] Threads: 6
[2026-02-04 19:59:27] Checking for CVMFS
[2026-02-04 19:59:27] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-04 19:59:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-04 19:59:32] Running cvmfs_config stat atlas.cern.ch
[2026-02-04 19:59:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-04 19:59:33] 2.13.3.0 3026 115 50808 155864 0 50 41767526 52428800 0 130560 0 82355 99.976 6605 137 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-02-04 19:59:33] CVMFS is ok
[2026-02-04 19:59:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-04 19:59:33] Small home clusters do not require a local http proxy but it is suggested if
[2026-02-04 19:59:33] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-02-04 19:59:33] Further information can be found at the LHC@home message board.
[2026-02-04 19:59:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 19:59:33] Checking for apptainer binary...
[2026-02-04 19:59:33] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-04 19:59:33] Running /usr/bin/apptainer --version
[2026-02-04 19:59:33] apptainer version 1.4.5-2.el9
[2026-02-04 19:59:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 19:59:33] Atto003
[2026-02-04 19:59:33] apptainer works
[2026-02-04 19:59:33] Set ATHENA_PROC_NUMBER=6
[2026-02-04 19:59:33] Set ATHENA_CORE_NUMBER=6
[2026-02-04 19:59:33] Starting ATLAS job with PandaID=7000017237
[2026-02-04 19:59:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 21:46:26]  *** The last 200 lines of the pilot log: ***
[2026-02-04 21:46:26] 2026-02-04 12:45:54,051 | INFO     | current chi2=1.628769221278251 (change=-0.2620525332545949 %)
[2026-02-04 21:46:26] 2026-02-04 12:45:54,052 | INFO     | right removable region: 98
[2026-02-04 21:46:26] 2026-02-04 12:45:54,052 | INFO     | sum of square deviations: 300837726.98989975
[2026-02-04 21:46:26] 2026-02-04 12:45:54,052 | INFO     | sum of deviations: -5081029870.535352
[2026-02-04 21:46:26] 2026-02-04 12:45:54,052 | INFO     | mean x: 1770206122.010101
[2026-02-04 21:46:26] 2026-02-04 12:45:54,052 | INFO     | mean y: 2522552.5353535353
[2026-02-04 21:46:26] 2026-02-04 12:45:54,052 | INFO     | intersect: 29900601736.067574
[2026-02-04 21:46:26] 2026-02-04 12:45:54,052 | INFO     | chi2: 0.12231239041599727
[2026-02-04 21:46:26] 2026-02-04 12:45:54,052 | INFO     | current chi2=0.12231239041599727 (change=92.47082327370326 %)
[2026-02-04 21:46:26] 2026-02-04 12:45:54,053 | INFO     | sum of square deviations: 257515679.48936144
[2026-02-04 21:46:26] 2026-02-04 12:45:54,053 | INFO     | sum of deviations: -123405303.51063833
[2026-02-04 21:46:26] 2026-02-04 12:45:54,053 | INFO     | mean x: 1770206274.5106382
[2026-02-04 21:46:26] 2026-02-04 12:45:54,053 | INFO     | mean y: 2505052.510638298
[2026-02-04 21:46:26] 2026-02-04 12:45:54,053 | INFO     | intersect: 850813951.6642778
[2026-02-04 21:46:26] 2026-02-04 12:45:54,053 | INFO     | chi2: 0.0504855893942391
[2026-02-04 21:46:26] 2026-02-04 12:45:54,053 | INFO     | current chi2=0.0504855893942391 (change=58.724059580119146 %)
[2026-02-04 21:46:26] 2026-02-04 12:45:54,053 | INFO     | sum of square deviations: 218571540.0
[2026-02-04 21:46:26] 2026-02-04 12:45:54,054 | INFO     | sum of deviations: 1693204816.0
[2026-02-04 21:46:26] 2026-02-04 12:45:54,054 | INFO     | mean x: 1770206427.0
[2026-02-04 21:46:26] 2026-02-04 12:45:54,054 | INFO     | mean y: 2498239.011235955
[2026-02-04 21:46:26] 2026-02-04 12:45:54,054 | INFO     | intersect: -13710732895.795027
[2026-02-04 21:46:26] 2026-02-04 12:45:54,054 | INFO     | chi2: 0.0006050608346986152
[2026-02-04 21:46:26] 2026-02-04 12:45:54,054 | INFO     | current chi2=0.0006050608346986152 (change=98.80151773613312 %)
[2026-02-04 21:46:26] 2026-02-04 12:45:54,054 | INFO     | sum of square deviations: 183761585.0
[2026-02-04 21:46:26] 2026-02-04 12:45:54,055 | INFO     | sum of deviations: 1240015167.5
[2026-02-04 21:46:26] 2026-02-04 12:45:54,055 | INFO     | mean x: 1770206579.5
[2026-02-04 21:46:26] 2026-02-04 12:45:54,055 | INFO     | mean y: 2500221.773809524
[2026-02-04 21:46:26] 2026-02-04 12:45:54,055 | INFO     | intersect: -11942776633.496536
[2026-02-04 21:46:26] 2026-02-04 12:45:54,055 | INFO     | chi2: 0.0004166779529081344
[2026-02-04 21:46:26] 2026-02-04 12:45:54,055 | INFO     | current chi2=0.0004166779529081344 (change=31.13453573380196 %)
[2026-02-04 21:46:26] 2026-02-04 12:45:54,055 | INFO     | sum of square deviations: 152858680.0
[2026-02-04 21:46:26] 2026-02-04 12:45:54,055 | INFO     | sum of deviations: 873528235.0000001
[2026-02-04 21:46:26] 2026-02-04 12:45:54,055 | INFO     | mean x: 1770206732.0
[2026-02-04 21:46:26] 2026-02-04 12:45:54,056 | INFO     | mean y: 2502027.7215189873
[2026-02-04 21:46:26] 2026-02-04 12:45:54,056 | INFO     | intersect: -10113544782.240978
[2026-02-04 21:46:26] 2026-02-04 12:45:54,056 | INFO     | chi2: 0.00025817286791539725
[2026-02-04 21:46:26] 2026-02-04 12:45:54,056 | INFO     | current chi2=0.00025817286791539725 (change=38.04019000440923 %)
[2026-02-04 21:46:26] 2026-02-04 12:45:54,056 | INFO     | sum of square deviations: 125630262.5
[2026-02-04 21:46:26] 2026-02-04 12:45:54,056 | INFO     | sum of deviations: 646182272.0
[2026-02-04 21:46:26] 2026-02-04 12:45:54,056 | INFO     | mean x: 1770206884.5
[2026-02-04 21:46:26] 2026-02-04 12:45:54,056 | INFO     | mean y: 2503287.6486486485
[2026-02-04 21:46:26] 2026-02-04 12:45:54,056 | INFO     | intersect: -9102598331.766113
[2026-02-04 21:46:26] 2026-02-04 12:45:54,056 | INFO     | chi2: 0.00019383786944050894
[2026-02-04 21:46:26] 2026-02-04 12:45:54,057 | INFO     | current chi2=0.00019383786944050894 (change=24.919349192019187 %)
[2026-02-04 21:46:26] 2026-02-04 12:45:54,057 | INFO     | left removable region: 60
[2026-02-04 21:46:26] 2026-02-04 12:45:54,057 | INFO     | sum of square deviations: 17003109.5
[2026-02-04 21:46:26] 2026-02-04 12:45:54,057 | INFO     | sum of deviations: 2101938.0
[2026-02-04 21:46:26] 2026-02-04 12:45:54,057 | INFO     | mean x: 1770207616.5
[2026-02-04 21:46:26] 2026-02-04 12:45:54,057 | INFO     | mean y: 2509315.5263157897
[2026-02-04 21:46:26] 2026-02-04 12:45:54,057 | INFO     | intersect: -216325166.30836138
[2026-02-04 21:46:26] 2026-02-04 12:45:54,057 | INFO     | chi2: 4.1591352548537866e-08
[2026-02-04 21:46:26] 2026-02-04 12:45:54,057 | INFO     | current memory leak: 0.12 B/s (using 38 data points, chi2=0.00)
[2026-02-04 21:46:26] 2026-02-04 12:45:54,058 | INFO     | could have reported an average CPU frequency of 3799 MHz (7 samples)
[2026-02-04 21:46:26] 2026-02-04 12:45:54,058 | INFO     | ..............................
[2026-02-04 21:46:26] 2026-02-04 12:45:54,058 | INFO     | . Timing measurements:
[2026-02-04 21:46:26] 2026-02-04 12:45:54,058 | INFO     | . get job = 0 s
[2026-02-04 21:46:26] 2026-02-04 12:45:54,058 | INFO     | . initial setup = 10 s
[2026-02-04 21:46:26] 2026-02-04 12:45:54,058 | INFO     | . payload setup = 6 s
[2026-02-04 21:46:26] 2026-02-04 12:45:54,058 | INFO     | . stage-in = 0 s
[2026-02-04 21:46:26] 2026-02-04 12:45:54,058 | INFO     | . payload execution = 6324 s
[2026-02-04 21:46:26] 2026-02-04 12:45:54,058 | INFO     | . stage-out = 0 s
[2026-02-04 21:46:26] 2026-02-04 12:45:54,058 | INFO     | . log creation = 0 s
[2026-02-04 21:46:26] 2026-02-04 12:45:54,058 | INFO     | ..............................
[2026-02-04 21:46:26] 2026-02-04 12:45:54,123 | INFO     | 
[2026-02-04 21:46:26] 2026-02-04 12:45:54,123 | INFO     | job summary report
[2026-02-04 21:46:26] 2026-02-04 12:45:54,123 | INFO     | --------------------------------------------------
[2026-02-04 21:46:26] 2026-02-04 12:45:54,123 | INFO     | PanDA job id: 7000017237
[2026-02-04 21:46:26] 2026-02-04 12:45:54,124 | INFO     | task id: 48317892
[2026-02-04 21:46:26] 2026-02-04 12:45:54,124 | INFO     | errors: (none)
[2026-02-04 21:46:26] 2026-02-04 12:45:54,124 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 21:46:26] 2026-02-04 12:45:54,124 | INFO     | pilot state: finished 
[2026-02-04 21:46:26] 2026-02-04 12:45:54,124 | INFO     | transexitcode: 0
[2026-02-04 21:46:26] 2026-02-04 12:45:54,124 | INFO     | exeerrorcode: 0
[2026-02-04 21:46:26] 2026-02-04 12:45:54,124 | INFO     | exeerrordiag: 
[2026-02-04 21:46:26] 2026-02-04 12:45:54,124 | INFO     | exitcode: 0
[2026-02-04 21:46:26] 2026-02-04 12:45:54,124 | INFO     | exitmsg: OK
[2026-02-04 21:46:26] 2026-02-04 12:45:54,124 | INFO     | cpuconsumptiontime: 35916 s
[2026-02-04 21:46:26] 2026-02-04 12:45:54,124 | INFO     | nevents: 400
[2026-02-04 21:46:26] 2026-02-04 12:45:54,124 | INFO     | neventsw: 0
[2026-02-04 21:46:26] 2026-02-04 12:45:54,124 | INFO     | pid: 37361
[2026-02-04 21:46:26] 2026-02-04 12:45:54,124 | INFO     | pgrp: 37361
[2026-02-04 21:46:26] 2026-02-04 12:45:54,124 | INFO     | corecount: 6
[2026-02-04 21:46:26] 2026-02-04 12:45:54,124 | INFO     | event service: False
[2026-02-04 21:46:26] 2026-02-04 12:45:54,125 | INFO     | sizes: {0: 2278223, 11: 2278223, 6334: 2305305, 6335: 2314303, 6337: 2314553}
[2026-02-04 21:46:26] 2026-02-04 12:45:54,125 | INFO     | --------------------------------------------------
[2026-02-04 21:46:26] 2026-02-04 12:45:54,125 | INFO     | 
[2026-02-04 21:46:26] 2026-02-04 12:45:54,125 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-02-04 21:46:26] 2026-02-04 12:45:54,137 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 21:46:26] 2026-02-04 12:45:54,138 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 21:46:26] 2026-02-04 12:45:54,138 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 21:46:26] 2026-02-04 12:45:54,138 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 21:46:26] 2026-02-04 12:45:54,138 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 21:46:26] 2026-02-04 12:45:54,138 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 21:46:26] 2026-02-04 12:45:54,138 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 21:46:26] 2026-02-04 12:45:54,138 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 21:46:26] 2026-02-04 12:45:54,138 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 21:46:26] 2026-02-04 12:45:54,138 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 21:46:26] 2026-02-04 12:45:54,138 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 21:46:26] 2026-02-04 12:45:54,138 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 21:46:26] 2026-02-04 12:45:54,139 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 21:46:26] 2026-02-04 12:45:54,139 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 21:46:26] 2026-02-04 12:45:54,139 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 21:46:26] 2026-02-04 12:45:54,139 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 21:46:26] 2026-02-04 12:45:54,139 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 21:46:26] 2026-02-04 12:45:54,139 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 21:46:26] 2026-02-04 12:45:54,139 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 21:46:26] 2026-02-04 12:45:54,139 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 21:46:26] 2026-02-04 12:45:54,139 | INFO     | job 7000017237 has completed (purged errors)
[2026-02-04 21:46:26] 2026-02-04 12:45:54,139 | INFO     | overall cleanup function is called
[2026-02-04 21:46:26] 2026-02-04 12:45:55,144 | INFO     | --- collectZombieJob: --- 10, [37361]
[2026-02-04 21:46:26] 2026-02-04 12:45:55,145 | INFO     | zombie collector waiting for pid 37361
[2026-02-04 21:46:26] 2026-02-04 12:45:55,145 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 21:46:26] 2026-02-04 12:45:55,145 | INFO     | collected zombie processes
[2026-02-04 21:46:26] 2026-02-04 12:45:55,145 | INFO     | will attempt to kill all subprocesses of pid=37361
[2026-02-04 21:46:26] 2026-02-04 12:45:55,220 | INFO     | process IDs to be killed: [37361] (in reverse order)
[2026-02-04 21:46:26] 2026-02-04 12:45:55,248 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 21:46:26] 2026-02-04 12:45:55,248 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 21:46:26] 2026-02-04 12:45:55,250 | INFO     | did not find any defunct processes belonging to 37361
[2026-02-04 21:46:26] 2026-02-04 12:45:55,253 | INFO     | did not find any defunct processes belonging to 37361
[2026-02-04 21:46:26] 2026-02-04 12:45:55,253 | INFO     | ready for new job
[2026-02-04 21:46:26] 2026-02-04 12:45:55,253 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 21:46:26] 2026-02-04 12:45:55,254 | INFO     | **************************************
[2026-02-04 21:46:26] 2026-02-04 12:45:55,254 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 21:46:26] 2026-02-04 12:45:55,254 | INFO     | **************************************
[2026-02-04 21:46:26] 2026-02-04 12:45:55,254 | INFO     | 
[2026-02-04 21:46:26] 2026-02-04 12:45:55,255 | INFO     | architecture information:
[2026-02-04 21:46:26] 2026-02-04 12:45:55,255 | INFO     | executing command: cat /etc/os-release
[2026-02-04 21:46:26] 2026-02-04 12:45:55,265 | INFO     | cat /etc/os-release:
[2026-02-04 21:46:26] NAME="CentOS Linux"
[2026-02-04 21:46:26] VERSION="7 (Core)"
[2026-02-04 21:46:26] ID="centos"
[2026-02-04 21:46:26] ID_LIKE="rhel fedora"
[2026-02-04 21:46:26] VERSION_ID="7"
[2026-02-04 21:46:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 21:46:26] ANSI_COLOR="0;31"
[2026-02-04 21:46:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 21:46:26] HOME_URL="https://www.centos.org/"
[2026-02-04 21:46:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 21:46:26] 
[2026-02-04 21:46:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 21:46:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 21:46:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 21:46:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 21:46:26] 
[2026-02-04 21:46:26] 2026-02-04 12:45:55,265 | INFO     | **************************************
[2026-02-04 21:46:26] 2026-02-04 12:45:55,768 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-02-04 21:46:26] 2026-02-04 12:45:55,776 | INFO     | sufficient remaining disk space (114853675008 B)
[2026-02-04 21:46:26] 2026-02-04 12:45:55,776 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 21:46:26] 2026-02-04 12:45:55,777 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 21:46:26] 2026-02-04 12:45:55,777 | INFO     | update_server=False
[2026-02-04 21:46:26] 2026-02-04 12:45:55,777 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 21:46:26] 2026-02-04 12:45:55,777 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 21:46:26] 2026-02-04 12:45:55,777 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 21:46:26] 2026-02-04 12:45:55,781 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-04 21:46:26] 2026-02-04 12:45:55,781 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-04 21:46:26] 2026-02-04 12:45:55,781 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 21:46:26] 2026-02-04 12:45:55,781 | INFO     | will abort loop
[2026-02-04 21:46:26] 2026-02-04 12:45:56,017 | INFO     | all payload control threads have been joined
[2026-02-04 21:46:26] 2026-02-04 12:45:56,782 | INFO     | [job] queue monitor thread has finished
[2026-02-04 21:46:26] 2026-02-04 12:45:56,782 | INFO     | [job] retrieve thread has finished
[2026-02-04 21:46:26] 2026-02-04 12:45:56,786 | INFO     | [job] job monitor thread has finished
[2026-02-04 21:46:26] 2026-02-04 12:45:56,813 | INFO     | [data] copytool_in thread has finished
[2026-02-04 21:46:26] 2026-02-04 12:45:56,838 | INFO     | all data control threads have been joined
[2026-02-04 21:46:26] 2026-02-04 12:45:56,899 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 21:46:26] 2026-02-04 12:45:57,022 | INFO     | [payload] control thread has finished
[2026-02-04 21:46:26] 2026-02-04 12:45:57,106 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 21:46:26] 2026-02-04 12:45:57,265 | INFO     | [payload] failed_post thread has finished
[2026-02-04 21:46:26] 2026-02-04 12:45:57,339 | INFO     | all job control threads have been joined
[2026-02-04 21:46:26] 2026-02-04 12:45:57,418 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 21:46:26] 2026-02-04 12:45:57,844 | INFO     | [data] control thread has finished
[2026-02-04 21:46:26] 2026-02-04 12:45:58,032 | INFO     | [job] validate thread has finished
[2026-02-04 21:46:26] 2026-02-04 12:45:58,054 | INFO     | [payload] validate_post thread has finished
[2026-02-04 21:46:26] 2026-02-04 12:45:58,263 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 21:46:26] 2026-02-04 12:45:58,344 | INFO     | [job] control thread has finished
[2026-02-04 21:46:26] 2026-02-04 12:45:59,111 | INFO     | [data] copytool_out thread has finished
[2026-02-04 21:46:26] 2026-02-04 12:45:59,783 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 21:46:26] 2026-02-04 12:46:06,583 | INFO     | job.realtimelogging is not enabled
[2026-02-04 21:46:26] 2026-02-04 12:46:07,588 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 21:46:26] 2026-02-04 12:46:15,324 | INFO     | [monitor] cgroup control has ended
[2026-02-04 21:46:26] 2026-02-04 12:46:15,413 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140335103063872)>', '<ExcThread(monitor, started 140334734489344)>']
[2026-02-04 21:46:26] 2026-02-04 12:46:20,438 | INFO     | all workflow threads have been joined
[2026-02-04 21:46:26] 2026-02-04 12:46:20,438 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 21:46:26] 2026-02-04 12:46:20,438 | INFO     | traces error code: 0
[2026-02-04 21:46:26] 2026-02-04 12:46:20,438 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 21:46:26] 2026-02-04 12:46:26,204 | INFO     | PID=32731 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-04 21:46:26] 2026-02-04 12:46:26,204 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 21:46:26] 2026-02-04 12:46:26,204 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 21:46:26] 2026-02-04 12:46:26,205 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 21:46:26] 2026-02-04 12:46:26,205 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 21:46:26] 2026-02-04 12:46:26,205 | INFO     | [monitor] control thread has ended
[2026-02-04 21:46:26] 2026-02-04 12:46:26,292 [wrapper] ==== pilot stdout END ====
[2026-02-04 21:46:26] 2026-02-04 12:46:26,301 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 21:46:26] 2026-02-04 12:46:26,305 [wrapper] pilotpid: 32731
[2026-02-04 21:46:26] 2026-02-04 12:46:26,307 [wrapper] Pilot exit status: 0
[2026-02-04 21:46:26] 2026-02-04 12:46:26,312 [wrapper] pandaids: 7000017237
[2026-02-04 21:46:26] 2026-02-04 12:46:26,330 [wrapper] cleanup supervisor_pilot   42369 32732
[2026-02-04 21:46:26] 2026-02-04 12:46:26,332 [wrapper] Test setup, not cleaning
[2026-02-04 21:46:26] 2026-02-04 12:46:26,333 [wrapper] apfmon messages muted
[2026-02-04 21:46:26] 2026-02-04 12:46:26,335 [wrapper] ==== wrapper stdout END ====
[2026-02-04 21:46:26] 2026-02-04 12:46:26,336 [wrapper] ==== wrapper stderr END ====
[2026-02-04 21:46:26]  *** Error codes and diagnostics ***
[2026-02-04 21:46:26]     "exeErrorCode": 0,
[2026-02-04 21:46:26]     "exeErrorDiag": "",
[2026-02-04 21:46:26]     "pilotErrorCode": 0,
[2026-02-04 21:46:26]     "pilotErrorDiag": "",
[2026-02-04 21:46:26]  *** Listing of results directory ***
[2026-02-04 21:46:26] total 671672
[2026-02-04 21:46:26] -rwx------. 1 boinc boinc     36322 Feb  4 02:16 runpilot2-wrapper.sh
[2026-02-04 21:46:26] -rw-r--r--. 1 boinc boinc    584422 Feb  4 02:17 pilot3.tar.gz
[2026-02-04 21:46:26] -rw-r--r--. 1 boinc boinc      5111 Feb  4 02:19 queuedata.json
[2026-02-04 21:46:26] -rw-r--r--. 1 boinc boinc       100 Feb  4 19:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 21:46:26] -rwxr-xr-x. 1 boinc boinc      7986 Feb  4 19:59 run_atlas
[2026-02-04 21:46:26] -rw-r--r--. 1 boinc boinc       105 Feb  4 19:59 job.xml
[2026-02-04 21:46:26] -rw-r--r--. 1 boinc boinc      6559 Feb  4 19:59 init_data.xml
[2026-02-04 21:46:26] -rw-r--r--. 2 boinc boinc 492093413 Feb  4 19:59 EVNT.48317889._000241.pool.root.1
[2026-02-04 21:46:26] -rw-r--r--. 2 boinc boinc     15845 Feb  4 19:59 start_atlas.sh
[2026-02-04 21:46:26] drwxrwx--x. 2 boinc boinc        68 Feb  4 19:59 shared
[2026-02-04 21:46:26] -rw-r--r--. 2 boinc boinc    597754 Feb  4 19:59 input.tar.gz
[2026-02-04 21:46:26] -rw-r--r--. 1 boinc boinc         0 Feb  4 19:59 boinc_lockfile
[2026-02-04 21:46:26] -rw-r--r--. 1 boinc boinc      2522 Feb  4 19:59 pandaJob.out
[2026-02-04 21:46:26] -rw-------. 1 boinc boinc   1009236 Feb  4 19:59 agis_schedconf.cvmfs.json
[2026-02-04 21:46:26] -rw-------. 1 boinc boinc   1511668 Feb  4 19:59 agis_ddmendpoints.agis.ALL.json
[2026-02-04 21:46:26] -rw-------. 1 boinc boinc       426 Feb  4 20:00 workernode_map.json
[2026-02-04 21:46:26] drwx------. 5 boinc boinc      4096 Feb  4 20:00 pilot3
[2026-02-04 21:46:26] -rw-------. 1 boinc boinc 189317928 Feb  4 21:45 HITS.48317892._012635.pool.root.1
[2026-02-04 21:46:26] -rw-r--r--. 1 boinc boinc       530 Feb  4 21:45 boinc_task_state.xml
[2026-02-04 21:46:26] -rw-------. 1 boinc boinc        95 Feb  4 21:45 pilot_heartbeat.json
[2026-02-04 21:46:26] -rw-------. 1 boinc boinc      1013 Feb  4 21:45 memory_monitor_summary.json
[2026-02-04 21:46:26] -rw-------. 1 boinc boinc    317648 Feb  4 21:45 log.48317892._012635.job.log.tgz.1
[2026-02-04 21:46:26] -rw-------. 1 boinc boinc      6310 Feb  4 21:45 heartbeat.json
[2026-02-04 21:46:26] -rw-r--r--. 1 boinc boinc        27 Feb  4 21:45 wrapper_checkpoint.txt
[2026-02-04 21:46:26] -rw-r--r--. 1 boinc boinc      8192 Feb  4 21:45 boinc_mmap_file
[2026-02-04 21:46:26] -rw-------. 1 boinc boinc       745 Feb  4 21:46 pilotlog.txt
[2026-02-04 21:46:26] -rw-------. 1 boinc boinc    913053 Feb  4 21:46 log.48317892._012635.job.log.1
[2026-02-04 21:46:26] -rw-------. 1 boinc boinc       357 Feb  4 21:46 output.list
[2026-02-04 21:46:26] -rw-r--r--. 1 boinc boinc       620 Feb  4 21:46 runtime_log
[2026-02-04 21:46:26] -rw-------. 1 boinc boinc   1249280 Feb  4 21:46 result.tar.gz
[2026-02-04 21:46:26] -rw-r--r--. 1 boinc boinc      8764 Feb  4 21:46 runtime_log.err
[2026-02-04 21:46:26] -rw-------. 1 boinc boinc       639 Feb  4 21:46 pNJMDm5BZ78nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmHZVKDm491Wrn.diag
[2026-02-04 21:46:26] -rw-r--r--. 1 boinc boinc     21007 Feb  4 21:46 stderr.txt
[2026-02-04 21:46:26] HITS file was successfully produced:
[2026-02-04 21:46:26] -rw-------. 1 boinc boinc 189317928 Feb  4 21:45 shared/HITS.pool.root.1
[2026-02-04 21:46:26]  *** Contents of shared directory: ***
[2026-02-04 21:46:26] total 667264
[2026-02-04 21:46:26] -rw-r--r--. 2 boinc boinc 492093413 Feb  4 19:59 ATLAS.root_0
[2026-02-04 21:46:26] -rw-r--r--. 2 boinc boinc     15845 Feb  4 19:59 start_atlas.sh
[2026-02-04 21:46:26] -rw-r--r--. 2 boinc boinc    597754 Feb  4 19:59 input.tar.gz
[2026-02-04 21:46:26] -rw-------. 1 boinc boinc 189317928 Feb  4 21:45 HITS.pool.root.1
[2026-02-04 21:46:26] -rw-------. 1 boinc boinc   1249280 Feb  4 21:46 result.tar.gz
21:46:27 (28559): run_atlas exited; CPU time 35994.413033
21:46:27 (28559): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN