Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:00:43 (103117): wrapper (7.7.26015): starting
23:00:43 (103117): wrapper: running run_atlas (--nthreads 4)
[2026-02-03 23:00:43] Arguments: --nthreads 4
[2026-02-03 23:00:43] Threads: 4
[2026-02-03 23:00:43] Checking for CVMFS
[2026-02-03 23:00:43] No cvmfs_config command found, will try listing directly
[2026-02-03 23:00:43] CVMFS is ok
[2026-02-03 23:00:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-03 23:00:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-03 23:00:43] Further information can be found at the LHC@home message board.
[2026-02-03 23:00:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 23:00:43] Checking for apptainer binary...
[2026-02-03 23:00:43] which: no apptainer in ((null))
[2026-02-03 23:00:43] apptainer is not installed, using version from CVMFS
[2026-02-03 23:00:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 23:00:43] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot20/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut33.grid.cesnet.cz
[2026-02-03 23:00:43] apptainer works
[2026-02-03 23:00:43] Set ATHENA_PROC_NUMBER=4
[2026-02-03 23:00:43] Set ATHENA_CORE_NUMBER=4
[2026-02-03 23:00:43] Starting ATLAS job with PandaID=7000017065
[2026-02-03 23:00:43] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot20/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 02:08:20]  *** The last 200 lines of the pilot log: ***
[2026-02-04 02:08:20] 2026-02-04 01:07:43,518 | INFO     | job 7000017065 has finished - writing final server update
[2026-02-04 02:08:20] 2026-02-04 01:07:43,518 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_69520/.job.ad'
[2026-02-04 02:08:20] 2026-02-04 01:07:43,518 | INFO     | total number of processed events: 400 (read)
[2026-02-04 02:08:20] 2026-02-04 01:07:43,526 | INFO     | using path: /scratch/boinc/var/slot20/slots/0/PanDA_Pilot-7000017065/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 02:08:20] 2026-02-04 01:07:43,527 | INFO     | extracted standard info from prmon json
[2026-02-04 02:08:20] 2026-02-04 01:07:43,527 | INFO     | extracted standard memory fields from prmon json
[2026-02-04 02:08:20] 2026-02-04 01:07:43,527 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-04 02:08:20] 2026-02-04 01:07:43,528 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-04 02:08:20] 2026-02-04 01:07:43,528 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-04 02:08:20] 2026-02-04 01:07:43,532 | INFO     | fitting pss+swap vs Time
[2026-02-04 02:08:20] 2026-02-04 01:07:43,532 | INFO     | sum of square deviations: 1931608310.0
[2026-02-04 02:08:20] 2026-02-04 01:07:43,533 | INFO     | sum of deviations: 11808826520.0
[2026-02-04 02:08:20] 2026-02-04 01:07:43,533 | INFO     | mean x: 1770161660.5
[2026-02-04 02:08:20] 2026-02-04 01:07:43,534 | INFO     | mean y: 2301020.8260869565
[2026-02-04 02:08:20] 2026-02-04 01:07:43,534 | INFO     | intersect: -10819526496.16137
[2026-02-04 02:08:20] 2026-02-04 01:07:43,534 | INFO     | chi2: 2.1620872085891043
[2026-02-04 02:08:20] 2026-02-04 01:07:43,535 | INFO     | sum of square deviations: 1778377530.0
[2026-02-04 02:08:20] 2026-02-04 01:07:43,536 | INFO     | sum of deviations: 22943588339.0
[2026-02-04 02:08:20] 2026-02-04 01:07:43,536 | INFO     | mean x: 1770161508.0
[2026-02-04 02:08:20] 2026-02-04 01:07:43,536 | INFO     | mean y: 2311849.899441341
[2026-02-04 02:08:20] 2026-02-04 01:07:43,536 | INFO     | intersect: -22835278171.3237
[2026-02-04 02:08:20] 2026-02-04 01:07:43,537 | INFO     | chi2: 1.358365825075199
[2026-02-04 02:08:20] 2026-02-04 01:07:43,537 | INFO     | current chi2=1.358365825075199 (change=37.17340264171782 %)
[2026-02-04 02:08:20] 2026-02-04 01:07:43,537 | INFO     | sum of square deviations: 1633472487.5
[2026-02-04 02:08:20] 2026-02-04 01:07:43,539 | INFO     | sum of deviations: 22346166478.0
[2026-02-04 02:08:20] 2026-02-04 01:07:43,539 | INFO     | mean x: 1770161355.5
[2026-02-04 02:08:20] 2026-02-04 01:07:43,539 | INFO     | mean y: 2311221.0
[2026-02-04 02:08:20] 2026-02-04 01:07:43,539 | INFO     | intersect: -24213780966.42666
[2026-02-04 02:08:20] 2026-02-04 01:07:43,539 | INFO     | chi2: 1.3591717866755522
[2026-02-04 02:08:20] 2026-02-04 01:07:43,540 | INFO     | current chi2=1.3591717866755522 (change=-0.059333177077570305 %)
[2026-02-04 02:08:20] 2026-02-04 01:07:43,540 | INFO     | right removable region: 173
[2026-02-04 02:08:20] 2026-02-04 01:07:43,540 | INFO     | sum of square deviations: 1778377530.0
[2026-02-04 02:08:20] 2026-02-04 01:07:43,541 | INFO     | sum of deviations: -11871529640.0
[2026-02-04 02:08:20] 2026-02-04 01:07:43,541 | INFO     | mean x: 1770161813.0
[2026-02-04 02:08:20] 2026-02-04 01:07:43,542 | INFO     | mean y: 2324260.446927374
[2026-02-04 02:08:20] 2026-02-04 01:07:43,542 | INFO     | intersect: 11819010018.18119
[2026-02-04 02:08:20] 2026-02-04 01:07:43,542 | INFO     | chi2: 0.8345932302176429
[2026-02-04 02:08:20] 2026-02-04 01:07:43,542 | INFO     | current chi2=0.8345932302176429 (change=61.398724949570074 %)
[2026-02-04 02:08:20] 2026-02-04 01:07:43,543 | INFO     | sum of square deviations: 1633472487.5
[2026-02-04 02:08:20] 2026-02-04 01:07:43,544 | INFO     | sum of deviations: -10095014623.0
[2026-02-04 02:08:20] 2026-02-04 01:07:43,544 | INFO     | mean x: 1770161965.5
[2026-02-04 02:08:20] 2026-02-04 01:07:43,544 | INFO     | mean y: 2322370.264367816
[2026-02-04 02:08:20] 2026-02-04 01:07:43,544 | INFO     | intersect: 10942090908.48465
[2026-02-04 02:08:20] 2026-02-04 01:07:43,545 | INFO     | chi2: 0.8295067808299253
[2026-02-04 02:08:20] 2026-02-04 01:07:43,545 | INFO     | current chi2=0.8295067808299253 (change=0.6094525097443083 %)
[2026-02-04 02:08:20] 2026-02-04 01:07:43,545 | INFO     | left removable region: 20
[2026-02-04 02:08:20] 2026-02-04 01:07:43,545 | INFO     | sum of square deviations: 1110539892.0
[2026-02-04 02:08:20] 2026-02-04 01:07:43,546 | INFO     | sum of deviations: 734734813.0
[2026-02-04 02:08:20] 2026-02-04 01:07:43,546 | INFO     | mean x: 1770161935.0
[2026-02-04 02:08:20] 2026-02-04 01:07:43,547 | INFO     | mean y: 2334913.3529411764
[2026-02-04 02:08:20] 2026-02-04 01:07:43,547 | INFO     | intersect: -1168806805.7884214
[2026-02-04 02:08:20] 2026-02-04 01:07:43,547 | INFO     | chi2: 0.0003313445547044877
[2026-02-04 02:08:20] 2026-02-04 01:07:43,547 | INFO     | current memory leak: 0.66 B/s (using 153 data points, chi2=0.00)
[2026-02-04 02:08:20] 2026-02-04 01:07:43,548 | INFO     | could have reported an average CPU frequency of 2624 MHz (10 samples)
[2026-02-04 02:08:20] 2026-02-04 01:07:43,548 | INFO     | ..............................
[2026-02-04 02:08:20] 2026-02-04 01:07:43,549 | INFO     | . Timing measurements:
[2026-02-04 02:08:20] 2026-02-04 01:07:43,549 | INFO     | . get job = 0 s
[2026-02-04 02:08:20] 2026-02-04 01:07:43,549 | INFO     | . initial setup = 5 s
[2026-02-04 02:08:20] 2026-02-04 01:07:43,549 | INFO     | . payload setup = 5 s
[2026-02-04 02:08:20] 2026-02-04 01:07:43,549 | INFO     | . stage-in = 0 s
[2026-02-04 02:08:20] 2026-02-04 01:07:43,549 | INFO     | . payload execution = 11180 s
[2026-02-04 02:08:20] 2026-02-04 01:07:43,549 | INFO     | . stage-out = 1 s
[2026-02-04 02:08:20] 2026-02-04 01:07:43,549 | INFO     | . log creation = 0 s
[2026-02-04 02:08:20] 2026-02-04 01:07:43,550 | INFO     | ..............................
[2026-02-04 02:08:20] 2026-02-04 01:07:43,653 | INFO     | 
[2026-02-04 02:08:20] 2026-02-04 01:07:43,654 | INFO     | job summary report
[2026-02-04 02:08:20] 2026-02-04 01:07:43,654 | INFO     | --------------------------------------------------
[2026-02-04 02:08:20] 2026-02-04 01:07:43,654 | INFO     | PanDA job id: 7000017065
[2026-02-04 02:08:20] 2026-02-04 01:07:43,654 | INFO     | task id: 48317892
[2026-02-04 02:08:20] 2026-02-04 01:07:43,654 | INFO     | errors: (none)
[2026-02-04 02:08:20] 2026-02-04 01:07:43,654 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 02:08:20] 2026-02-04 01:07:43,654 | INFO     | pilot state: finished 
[2026-02-04 02:08:20] 2026-02-04 01:07:43,654 | INFO     | transexitcode: 0
[2026-02-04 02:08:20] 2026-02-04 01:07:43,655 | INFO     | exeerrorcode: 0
[2026-02-04 02:08:20] 2026-02-04 01:07:43,655 | INFO     | exeerrordiag: 
[2026-02-04 02:08:20] 2026-02-04 01:07:43,655 | INFO     | exitcode: 0
[2026-02-04 02:08:20] 2026-02-04 01:07:43,655 | INFO     | exitmsg: OK
[2026-02-04 02:08:20] 2026-02-04 01:07:43,655 | INFO     | cpuconsumptiontime: 43285 s
[2026-02-04 02:08:20] 2026-02-04 01:07:43,655 | INFO     | nevents: 400
[2026-02-04 02:08:20] 2026-02-04 01:07:43,655 | INFO     | neventsw: 0
[2026-02-04 02:08:20] 2026-02-04 01:07:43,655 | INFO     | pid: 111965
[2026-02-04 02:08:20] 2026-02-04 01:07:43,655 | INFO     | pgrp: 111965
[2026-02-04 02:08:20] 2026-02-04 01:07:43,656 | INFO     | corecount: 4
[2026-02-04 02:08:20] 2026-02-04 01:07:43,656 | INFO     | event service: False
[2026-02-04 02:08:20] 2026-02-04 01:07:43,656 | INFO     | sizes: {0: 2278030, 1: 2278264, 11: 2278264, 11189: 2307566, 11190: 2316642, 11194: 2316780}
[2026-02-04 02:08:20] 2026-02-04 01:07:43,656 | INFO     | --------------------------------------------------
[2026-02-04 02:08:20] 2026-02-04 01:07:43,656 | INFO     | 
[2026-02-04 02:08:20] 2026-02-04 01:07:43,656 | INFO     | executing command: ls -lF /scratch/boinc/var/slot20/slots/0
[2026-02-04 02:08:20] 2026-02-04 01:07:43,677 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 02:08:20] 2026-02-04 01:07:43,677 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 02:08:20] 2026-02-04 01:07:43,677 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 02:08:20] 2026-02-04 01:07:43,678 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 02:08:20] 2026-02-04 01:07:43,678 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 02:08:20] 2026-02-04 01:07:43,678 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 02:08:20] 2026-02-04 01:07:43,678 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 02:08:20] 2026-02-04 01:07:43,678 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 02:08:20] 2026-02-04 01:07:43,678 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 02:08:20] 2026-02-04 01:07:43,678 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 02:08:20] 2026-02-04 01:07:43,678 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 02:08:20] 2026-02-04 01:07:43,679 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 02:08:20] 2026-02-04 01:07:43,679 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 02:08:20] 2026-02-04 01:07:43,679 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 02:08:20] 2026-02-04 01:07:43,679 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 02:08:20] 2026-02-04 01:07:43,679 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 02:08:20] 2026-02-04 01:07:43,679 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 02:08:20] 2026-02-04 01:07:43,679 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 02:08:20] 2026-02-04 01:07:43,680 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 02:08:20] 2026-02-04 01:07:43,680 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 02:08:20] 2026-02-04 01:07:43,680 | INFO     | job 7000017065 has completed (purged errors)
[2026-02-04 02:08:20] 2026-02-04 01:07:43,680 | INFO     | overall cleanup function is called
[2026-02-04 02:08:20] 2026-02-04 01:07:44,688 | INFO     | --- collectZombieJob: --- 10, [111965]
[2026-02-04 02:08:20] 2026-02-04 01:07:44,688 | INFO     | zombie collector waiting for pid 111965
[2026-02-04 02:08:20] 2026-02-04 01:07:44,689 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 02:08:20] 2026-02-04 01:07:44,689 | INFO     | collected zombie processes
[2026-02-04 02:08:20] 2026-02-04 01:07:44,689 | INFO     | will attempt to kill all subprocesses of pid=111965
[2026-02-04 02:08:20] 2026-02-04 01:07:44,980 | INFO     | process IDs to be killed: [111965] (in reverse order)
[2026-02-04 02:08:20] 2026-02-04 01:07:45,058 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 02:08:20] 2026-02-04 01:07:45,058 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 02:08:20] 2026-02-04 01:07:45,066 | INFO     | did not find any defunct processes belonging to 111965
[2026-02-04 02:08:20] 2026-02-04 01:07:45,072 | INFO     | did not find any defunct processes belonging to 111965
[2026-02-04 02:08:20] 2026-02-04 01:07:45,072 | INFO     | ready for new job
[2026-02-04 02:08:20] 2026-02-04 01:07:45,072 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 02:08:20] 2026-02-04 01:07:45,074 | INFO     | **************************************
[2026-02-04 02:08:20] 2026-02-04 01:07:45,074 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 02:08:20] 2026-02-04 01:07:45,075 | INFO     | **************************************
[2026-02-04 02:08:20] 2026-02-04 01:07:45,075 | INFO     | 
[2026-02-04 02:08:20] 2026-02-04 01:07:45,077 | INFO     | architecture information:
[2026-02-04 02:08:20] 2026-02-04 01:07:45,078 | INFO     | executing command: cat /etc/os-release
[2026-02-04 02:08:20] 2026-02-04 01:07:45,090 | INFO     | cat /etc/os-release:
[2026-02-04 02:08:20] NAME="CentOS Linux"
[2026-02-04 02:08:20] VERSION="7 (Core)"
[2026-02-04 02:08:20] ID="centos"
[2026-02-04 02:08:20] ID_LIKE="rhel fedora"
[2026-02-04 02:08:20] VERSION_ID="7"
[2026-02-04 02:08:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 02:08:20] ANSI_COLOR="0;31"
[2026-02-04 02:08:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 02:08:20] HOME_URL="https://www.centos.org/"
[2026-02-04 02:08:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 02:08:20] 
[2026-02-04 02:08:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 02:08:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 02:08:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 02:08:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 02:08:20] 
[2026-02-04 02:08:20] 2026-02-04 01:07:45,091 | INFO     | **************************************
[2026-02-04 02:08:20] 2026-02-04 01:07:45,594 | INFO     | executing command: df -mP /scratch/boinc/var/slot20/slots/0
[2026-02-04 02:08:20] 2026-02-04 01:07:45,609 | INFO     | sufficient remaining disk space (1616683991040 B)
[2026-02-04 02:08:20] 2026-02-04 01:07:45,609 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 02:08:20] 2026-02-04 01:07:45,609 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 02:08:20] 2026-02-04 01:07:45,610 | INFO     | update_server=False
[2026-02-04 02:08:20] 2026-02-04 01:07:45,610 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 02:08:20] 2026-02-04 01:07:45,610 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 02:08:20] 2026-02-04 01:07:45,846 | INFO     | all payload control threads have been joined
[2026-02-04 02:08:20] 2026-02-04 01:07:45,901 | INFO     | job.realtimelogging is not enabled
[2026-02-04 02:08:20] 2026-02-04 01:07:45,967 | INFO     | all data control threads have been joined
[2026-02-04 02:08:20] 2026-02-04 01:07:45,983 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 02:08:20] 2026-02-04 01:07:46,441 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 02:08:20] 2026-02-04 01:07:46,441 | INFO     | aborting loop
[2026-02-04 02:08:20] 2026-02-04 01:07:46,594 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 02:08:20] 2026-02-04 01:07:46,615 | INFO     | [job] retrieve thread has finished
[2026-02-04 02:08:20] 2026-02-04 01:07:46,616 | INFO     | [job] queue monitor thread has finished
[2026-02-04 02:08:20] 2026-02-04 01:07:46,640 | INFO     | [payload] validate_post thread has finished
[2026-02-04 02:08:20] 2026-02-04 01:07:46,749 | INFO     | all job control threads have been joined
[2026-02-04 02:08:20] 2026-02-04 01:07:46,824 | INFO     | [job] validate thread has finished
[2026-02-04 02:08:20] 2026-02-04 01:07:46,852 | INFO     | [payload] control thread has finished
[2026-02-04 02:08:20] 2026-02-04 01:07:46,904 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 02:08:20] 2026-02-04 01:07:46,972 | INFO     | [data] control thread has finished
[2026-02-04 02:08:20] 2026-02-04 01:07:47,327 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 02:08:20] 2026-02-04 01:07:47,445 | INFO     | [job] job monitor thread has finished
[2026-02-04 02:08:20] 2026-02-04 01:07:47,564 | INFO     | [payload] failed_post thread has finished
[2026-02-04 02:08:20] 2026-02-04 01:07:47,640 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 02:08:20] 2026-02-04 01:07:47,671 | INFO     | [data] copytool_in thread has finished
[2026-02-04 02:08:20] 2026-02-04 01:07:47,679 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 02:08:20] 2026-02-04 01:07:47,753 | INFO     | [job] control thread has finished
[2026-02-04 02:08:20] 2026-02-04 01:07:47,988 | INFO     | [data] copytool_out thread has finished
[2026-02-04 02:08:20] 2026-02-04 01:07:50,597 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 02:08:20] 2026-02-04 01:08:15,358 | INFO     | [monitor] cgroup control has ended
[2026-02-04 02:08:20] 2026-02-04 01:08:15,644 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22467935045440)>', '<ExcThread(monitor, started 22467696670464)>']
[2026-02-04 02:08:20] 2026-02-04 01:08:15,795 | INFO     | PID=107274 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-04 02:08:20] 2026-02-04 01:08:15,795 | INFO     | .. there are 7 such processes running
[2026-02-04 02:08:20] 2026-02-04 01:08:15,796 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 02:08:20] 2026-02-04 01:08:15,796 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 02:08:20] 2026-02-04 01:08:15,796 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 02:08:20] 2026-02-04 01:08:15,796 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 02:08:20] 2026-02-04 01:08:15,796 | INFO     | [monitor] control thread has ended
[2026-02-04 02:08:20] 2026-02-04 01:08:20,668 | INFO     | all workflow threads have been joined
[2026-02-04 02:08:20] 2026-02-04 01:08:20,669 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 02:08:20] 2026-02-04 01:08:20,669 | INFO     | traces error code: 0
[2026-02-04 02:08:20] 2026-02-04 01:08:20,669 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 02:08:20] 2026-02-04 01:08:20,799 [wrapper] ==== pilot stdout END ====
[2026-02-04 02:08:20] 2026-02-04 01:08:20,802 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 02:08:20] 2026-02-04 01:08:20,804 [wrapper] pilotpid: 107274
[2026-02-04 02:08:20] 2026-02-04 01:08:20,806 [wrapper] Pilot exit status: 0
[2026-02-04 02:08:20] 2026-02-04 01:08:20,816 [wrapper] pandaids: 7000017065
[2026-02-04 02:08:20] 2026-02-04 01:08:20,865 [wrapper] cleanup supervisor_pilot  267535 107275
[2026-02-04 02:08:20] 2026-02-04 01:08:20,867 [wrapper] Test setup, not cleaning
[2026-02-04 02:08:20] 2026-02-04 01:08:20,870 [wrapper] apfmon messages muted
[2026-02-04 02:08:20] 2026-02-04 01:08:20,872 [wrapper] ==== wrapper stdout END ====
[2026-02-04 02:08:20] 2026-02-04 01:08:20,874 [wrapper] ==== wrapper stderr END ====
[2026-02-04 02:08:20]  *** Error codes and diagnostics ***
[2026-02-04 02:08:20]     "exeErrorCode": 0,
[2026-02-04 02:08:20]     "exeErrorDiag": "",
[2026-02-04 02:08:20]     "pilotErrorCode": 0,
[2026-02-04 02:08:20]     "pilotErrorDiag": "",
[2026-02-04 02:08:20]  *** Listing of results directory ***
[2026-02-04 02:08:20] total 675548
[2026-02-04 02:08:20] -rw-r--r-- 1 boinc boinc      5111 Feb  3 18:16 queuedata.json
[2026-02-04 02:08:20] -rwx------ 1 boinc boinc     36322 Feb  3 18:16 runpilot2-wrapper.sh
[2026-02-04 02:08:20] -rw-r--r-- 1 boinc boinc    584422 Feb  3 18:17 pilot3.tar.gz
[2026-02-04 02:08:20] -rw-r--r-- 1 boinc boinc       100 Feb  3 23:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 02:08:20] -rwxr-xr-x 1 boinc boinc      7986 Feb  3 23:00 run_atlas
[2026-02-04 02:08:20] -rw-r--r-- 1 boinc boinc       105 Feb  3 23:00 job.xml
[2026-02-04 02:08:20] -rw-r--r-- 2 boinc boinc 496166520 Feb  3 23:00 EVNT.48317889._000240.pool.root.1
[2026-02-04 02:08:20] -rw-r--r-- 1 boinc boinc      6421 Feb  3 23:00 init_data.xml
[2026-02-04 02:08:20] drwxrwx--x 2 boinc boinc      4096 Feb  3 23:00 shared
[2026-02-04 02:08:20] -rw-r--r-- 2 boinc boinc    597752 Feb  3 23:00 input.tar.gz
[2026-02-04 02:08:20] -rw-r--r-- 2 boinc boinc     15845 Feb  3 23:00 start_atlas.sh
[2026-02-04 02:08:20] -rw-r--r-- 1 boinc boinc         0 Feb  3 23:00 boinc_lockfile
[2026-02-04 02:08:20] -rw-r--r-- 1 boinc boinc      2523 Feb  3 23:00 pandaJob.out
[2026-02-04 02:08:20] -rw------- 1 boinc boinc   1009252 Feb  3 23:00 agis_schedconf.cvmfs.json
[2026-02-04 02:08:20] -rw------- 1 boinc boinc       454 Feb  3 23:00 workernode_map.json
[2026-02-04 02:08:20] drwx------ 5 boinc boinc      4096 Feb  3 23:00 pilot3
[2026-02-04 02:08:20] -rw------- 1 boinc boinc 187677818 Feb  4 02:07 HITS.48317892._012603.pool.root.1
[2026-02-04 02:08:20] -rw-r--r-- 1 boinc boinc       531 Feb  4 02:07 boinc_task_state.xml
[2026-02-04 02:08:20] -rw------- 1 boinc boinc        95 Feb  4 02:07 pilot_heartbeat.json
[2026-02-04 02:08:20] -rw------- 1 boinc boinc      1045 Feb  4 02:07 memory_monitor_summary.json
[2026-02-04 02:08:20] -rw------- 1 boinc boinc   1511668 Feb  4 02:07 agis_ddmendpoints.agis.ALL.json
[2026-02-04 02:08:20] -rw------- 1 boinc boinc    387696 Feb  4 02:07 log.48317892._012603.job.log.tgz.1
[2026-02-04 02:08:20] -rw------- 1 boinc boinc      6410 Feb  4 02:07 heartbeat.json
[2026-02-04 02:08:20] -rw-r--r-- 1 boinc boinc      8192 Feb  4 02:08 boinc_mmap_file
[2026-02-04 02:08:20] -rw-r--r-- 1 boinc boinc        28 Feb  4 02:08 wrapper_checkpoint.txt
[2026-02-04 02:08:20] -rw------- 1 boinc boinc      4901 Feb  4 02:08 pilotlog.txt
[2026-02-04 02:08:20] -rw------- 1 boinc boinc   1599570 Feb  4 02:08 log.48317892._012603.job.log.1
[2026-02-04 02:08:20] -rw------- 1 boinc boinc       357 Feb  4 02:08 output.list
[2026-02-04 02:08:20] -rw-r--r-- 1 boinc boinc       620 Feb  4 02:08 runtime_log
[2026-02-04 02:08:20] -rw------- 1 boinc boinc   2007040 Feb  4 02:08 result.tar.gz
[2026-02-04 02:08:20] -rw-r--r-- 1 boinc boinc      9205 Feb  4 02:08 runtime_log.err
[2026-02-04 02:08:20] -rw------- 1 boinc boinc       664 Feb  4 02:08 KawLDm5BZ78nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmyYVKDmqXWoJn.diag
[2026-02-04 02:08:20] -rw-r--r-- 1 boinc boinc     20839 Feb  4 02:08 stderr.txt
[2026-02-04 02:08:20] HITS file was successfully produced:
[2026-02-04 02:08:20] -rw------- 1 boinc boinc 187677818 Feb  4 02:07 shared/HITS.pool.root.1
[2026-02-04 02:08:20]  *** Contents of shared directory: ***
[2026-02-04 02:08:20] total 670388
[2026-02-04 02:08:20] -rw-r--r-- 2 boinc boinc 496166520 Feb  3 23:00 ATLAS.root_0
[2026-02-04 02:08:20] -rw-r--r-- 2 boinc boinc    597752 Feb  3 23:00 input.tar.gz
[2026-02-04 02:08:20] -rw-r--r-- 2 boinc boinc     15845 Feb  3 23:00 start_atlas.sh
[2026-02-04 02:08:20] -rw------- 1 boinc boinc 187677818 Feb  4 02:07 HITS.pool.root.1
[2026-02-04 02:08:20] -rw------- 1 boinc boinc   2007040 Feb  4 02:08 result.tar.gz
02:08:22 (103117): run_atlas exited; CPU time 43705.019993
02:08:22 (103117): called boinc_finish(0)

</stderr_txt>
]]>

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