Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:00:04 (1041036): wrapper (7.7.26015): starting
13:00:04 (1041036): wrapper: running run_atlas (--nthreads 12)
[2026-02-03 13:00:04] Arguments: --nthreads 12
[2026-02-03 13:00:04] Threads: 12
[2026-02-03 13:00:04] Checking for CVMFS
[2026-02-03 13:00:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-03 13:00:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-03 13:00:04] Running cvmfs_config stat atlas.cern.ch
[2026-02-03 13:00:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-03 13:00:04] 2.13.3.0 8492 58501 384208 155839 3 324 20355803 39288833 11014 16776704 0 96924261 99.453 157426252 30309 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-03 13:00:04] CVMFS is ok
[2026-02-03 13:00:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-03 13:00:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-03 13:00:04] Further information can be found at the LHC@home message board.
[2026-02-03 13:00:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 13:00:04] Checking for apptainer binary...
[2026-02-03 13:00:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-03 13:00:04] Running /usr/bin/apptainer --version
[2026-02-03 13:00:04] apptainer version 1.4.5-2.el9
[2026-02-03 13:00:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 13:00:05] c-211-22.aglt2.org
[2026-02-03 13:00:05] apptainer works
[2026-02-03 13:00:05] Set ATHENA_PROC_NUMBER=12
[2026-02-03 13:00:05] Set ATHENA_CORE_NUMBER=12
[2026-02-03 13:00:05] Starting ATLAS job with PandaID=6994196644
[2026-02-03 13:00:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
13:00:14 (1041036): BOINC client no longer exists - exiting
13:00:14 (1041036): timer handler: client dead, exiting
13:07:58 (1137128): wrapper (7.7.26015): starting
13:07:58 (1137128): wrapper: running run_atlas (--nthreads 12)
[2026-02-03 13:07:58] Arguments: --nthreads 12
[2026-02-03 13:07:58] Threads: 12
[2026-02-03 13:07:58] This job has been restarted, cleaning up previous attempt
[2026-02-03 13:07:58] Checking for CVMFS
[2026-02-03 13:07:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-03 13:07:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-03 13:07:58] Running cvmfs_config stat atlas.cern.ch
[2026-02-03 13:07:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-03 13:07:59] 2.13.3.0 8492 58509 393980 155839 3 587 20644470 39288832 9668 16776704 0 97048588 99.454 157535304 30292 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-03 13:07:59] CVMFS is ok
[2026-02-03 13:07:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-03 13:07:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-03 13:07:59] Further information can be found at the LHC@home message board.
[2026-02-03 13:07:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 13:07:59] Checking for apptainer binary...
[2026-02-03 13:07:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-03 13:07:59] Running /usr/bin/apptainer --version
[2026-02-03 13:07:59] apptainer version 1.4.5-2.el9
[2026-02-03 13:07:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 13:07:59] c-211-22.aglt2.org
[2026-02-03 13:07:59] apptainer works
[2026-02-03 13:07:59] Set ATHENA_PROC_NUMBER=12
[2026-02-03 13:07:59] Set ATHENA_CORE_NUMBER=12
[2026-02-03 13:07:59] Starting ATLAS job with PandaID=6994196644
[2026-02-03 13:07:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-03 18:51:58]  *** The last 200 lines of the pilot log: ***
[2026-02-03 18:51:58] 2026-02-03 23:51:03,223 | INFO     | job 6994196644 has finished - writing final server update
[2026-02-03 18:51:58] 2026-02-03 23:51:03,223 | INFO     | total number of processed events: 400 (read)
[2026-02-03 18:51:58] 2026-02-03 23:51:03,258 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6994196644/memory_monitor_summary.json (trf name=prmon)
[2026-02-03 18:51:58] 2026-02-03 23:51:03,259 | INFO     | extracted standard info from prmon json
[2026-02-03 18:51:58] 2026-02-03 23:51:03,260 | INFO     | extracted standard memory fields from prmon json
[2026-02-03 18:51:58] 2026-02-03 23:51:03,260 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-03 18:51:58] 2026-02-03 23:51:03,261 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-03 18:51:58] 2026-02-03 23:51:03,261 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-03 18:51:58] 2026-02-03 23:51:03,270 | INFO     | fitting pss+swap vs Time
[2026-02-03 18:51:58] 2026-02-03 23:51:03,271 | INFO     | sum of square deviations: 11868090447.85756
[2026-02-03 18:51:58] 2026-02-03 23:51:03,276 | INFO     | sum of deviations: 23653696159.047466
[2026-02-03 18:51:58] 2026-02-03 23:51:03,276 | INFO     | mean x: 1770152358.4658754
[2026-02-03 18:51:58] 2026-02-03 23:51:03,276 | INFO     | mean y: 2685800.178041543
[2026-02-03 18:51:58] 2026-02-03 23:51:03,277 | INFO     | intersect: -3525316132.9325733
[2026-02-03 18:51:58] 2026-02-03 23:51:03,277 | INFO     | chi2: 2.293042515827599
[2026-02-03 18:51:58] 2026-02-03 23:51:03,278 | INFO     | sum of square deviations: 11347680353.698744
[2026-02-03 18:51:58] 2026-02-03 23:51:03,282 | INFO     | sum of deviations: 46470963714.65657
[2026-02-03 18:51:58] 2026-02-03 23:51:03,282 | INFO     | mean x: 1770152205.9698796
[2026-02-03 18:51:58] 2026-02-03 23:51:03,282 | INFO     | mean y: 2692405.1656626505
[2026-02-03 18:51:58] 2026-02-03 23:51:03,283 | INFO     | intersect: -7246426037.462388
[2026-02-03 18:51:58] 2026-02-03 23:51:03,283 | INFO     | chi2: 1.5846302356726176
[2026-02-03 18:51:58] 2026-02-03 23:51:03,283 | INFO     | current chi2=1.5846302356726176 (change=30.893988020946182 %)
[2026-02-03 18:51:58] 2026-02-03 23:51:03,284 | INFO     | sum of square deviations: 10842711921.529041
[2026-02-03 18:51:58] 2026-02-03 23:51:03,287 | INFO     | sum of deviations: 45849343534.63916
[2026-02-03 18:51:58] 2026-02-03 23:51:03,288 | INFO     | mean x: 1770152053.4740062
[2026-02-03 18:51:58] 2026-02-03 23:51:03,288 | INFO     | mean y: 2692217.4281345564
[2026-02-03 18:51:58] 2026-02-03 23:51:03,288 | INFO     | intersect: -7482548578.015909
[2026-02-03 18:51:58] 2026-02-03 23:51:03,290 | INFO     | chi2: 1.5850294470432116
[2026-02-03 18:51:58] 2026-02-03 23:51:03,290 | INFO     | current chi2=1.5850294470432116 (change=-0.025192714464677888 %)
[2026-02-03 18:51:58] 2026-02-03 23:51:03,290 | INFO     | right removable region: 326
[2026-02-03 18:51:58] 2026-02-03 23:51:03,290 | INFO     | sum of square deviations: 11347604896.756063
[2026-02-03 18:51:58] 2026-02-03 23:51:03,294 | INFO     | sum of deviations: -32763762528.75905
[2026-02-03 18:51:58] 2026-02-03 23:51:03,294 | INFO     | mean x: 1770152510.9728916
[2026-02-03 18:51:58] 2026-02-03 23:51:03,294 | INFO     | mean y: 2702223.9156626505
[2026-02-03 18:51:58] 2026-02-03 23:51:03,295 | INFO     | intersect: 5113635944.0156555
[2026-02-03 18:51:58] 2026-02-03 23:51:03,295 | INFO     | chi2: 0.8426860370545247
[2026-02-03 18:51:58] 2026-02-03 23:51:03,295 | INFO     | current chi2=0.8426860370545247 (change=63.250309087688905 %)
[2026-02-03 18:51:58] 2026-02-03 23:51:03,296 | INFO     | sum of square deviations: 10842561495.620838
[2026-02-03 18:51:58] 2026-02-03 23:51:03,300 | INFO     | sum of deviations: -46440763031.596306
[2026-02-03 18:51:58] 2026-02-03 23:51:03,300 | INFO     | mean x: 1770152663.4801223
[2026-02-03 18:51:58] 2026-02-03 23:51:03,301 | INFO     | mean y: 2706378.908256881
[2026-02-03 18:51:58] 2026-02-03 23:51:03,301 | INFO     | intersect: 7584608534.375097
[2026-02-03 18:51:58] 2026-02-03 23:51:03,302 | INFO     | chi2: 0.7505986684402091
[2026-02-03 18:51:58] 2026-02-03 23:51:03,302 | INFO     | current chi2=0.7505986684402091 (change=10.927838431522188 %)
[2026-02-03 18:51:58] 2026-02-03 23:51:03,302 | INFO     | left removable region: 20
[2026-02-03 18:51:58] 2026-02-03 23:51:03,302 | INFO     | sum of square deviations: 8885085731.88237
[2026-02-03 18:51:58] 2026-02-03 23:51:03,306 | INFO     | sum of deviations: -22325008718.764698
[2026-02-03 18:51:58] 2026-02-03 23:51:03,307 | INFO     | mean x: 1770152632.9803922
[2026-02-03 18:51:58] 2026-02-03 23:51:03,307 | INFO     | mean y: 2713518.3725490198
[2026-02-03 18:51:58] 2026-02-03 23:51:03,307 | INFO     | intersect: 4450467221.302687
[2026-02-03 18:51:58] 2026-02-03 23:51:03,308 | INFO     | chi2: 0.028733386526021962
[2026-02-03 18:51:58] 2026-02-03 23:51:03,308 | INFO     | current memory leak: -2.51 B/s (using 306 data points, chi2=0.03)
[2026-02-03 18:51:58] 2026-02-03 23:51:03,309 | INFO     | could have reported an average CPU frequency of 2899 MHz (15 samples)
[2026-02-03 18:51:58] 2026-02-03 23:51:03,309 | INFO     | ..............................
[2026-02-03 18:51:58] 2026-02-03 23:51:03,309 | INFO     | . Timing measurements:
[2026-02-03 18:51:58] 2026-02-03 23:51:03,310 | INFO     | . get job = 0 s
[2026-02-03 18:51:58] 2026-02-03 23:51:03,310 | INFO     | . initial setup = 1 s
[2026-02-03 18:51:58] 2026-02-03 23:51:03,310 | INFO     | . payload setup = 8 s
[2026-02-03 18:51:58] 2026-02-03 23:51:03,310 | INFO     | . stage-in = 0 s
[2026-02-03 18:51:58] 2026-02-03 23:51:03,310 | INFO     | . payload execution = 20549 s
[2026-02-03 18:51:58] 2026-02-03 23:51:03,310 | INFO     | . stage-out = 4 s
[2026-02-03 18:51:58] 2026-02-03 23:51:03,310 | INFO     | . log creation = 1 s
[2026-02-03 18:51:58] 2026-02-03 23:51:03,311 | INFO     | ..............................
[2026-02-03 18:51:58] 2026-02-03 23:51:05,231 | INFO     | 
[2026-02-03 18:51:58] 2026-02-03 23:51:05,231 | INFO     | job summary report
[2026-02-03 18:51:58] 2026-02-03 23:51:05,231 | INFO     | --------------------------------------------------
[2026-02-03 18:51:58] 2026-02-03 23:51:05,231 | INFO     | PanDA job id: 6994196644
[2026-02-03 18:51:58] 2026-02-03 23:51:05,232 | INFO     | task id: 48442098
[2026-02-03 18:51:58] 2026-02-03 23:51:05,232 | INFO     | errors: (none)
[2026-02-03 18:51:58] 2026-02-03 23:51:05,232 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-03 18:51:58] 2026-02-03 23:51:05,232 | INFO     | pilot state: finished 
[2026-02-03 18:51:58] 2026-02-03 23:51:05,232 | INFO     | transexitcode: 0
[2026-02-03 18:51:58] 2026-02-03 23:51:05,232 | INFO     | exeerrorcode: 0
[2026-02-03 18:51:58] 2026-02-03 23:51:05,233 | INFO     | exeerrordiag: 
[2026-02-03 18:51:58] 2026-02-03 23:51:05,233 | INFO     | exitcode: 0
[2026-02-03 18:51:58] 2026-02-03 23:51:05,233 | INFO     | exitmsg: OK
[2026-02-03 18:51:58] 2026-02-03 23:51:05,233 | INFO     | cpuconsumptiontime: 76361 s
[2026-02-03 18:51:58] 2026-02-03 23:51:05,233 | INFO     | nevents: 400
[2026-02-03 18:51:58] 2026-02-03 23:51:05,233 | INFO     | neventsw: 0
[2026-02-03 18:51:58] 2026-02-03 23:51:05,233 | INFO     | pid: 1147521
[2026-02-03 18:51:58] 2026-02-03 23:51:05,233 | INFO     | pgrp: 1147521
[2026-02-03 18:51:58] 2026-02-03 23:51:05,234 | INFO     | corecount: 12
[2026-02-03 18:51:58] 2026-02-03 23:51:05,234 | INFO     | event service: False
[2026-02-03 18:51:58] 2026-02-03 23:51:05,234 | INFO     | sizes: {0: 2277839, 1: 2278300, 20562: 2311543, 20567: 2320541, 20568: 2320597, 20570: 2320791}
[2026-02-03 18:51:58] 2026-02-03 23:51:05,234 | INFO     | --------------------------------------------------
[2026-02-03 18:51:58] 2026-02-03 23:51:05,234 | INFO     | 
[2026-02-03 18:51:58] 2026-02-03 23:51:05,234 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-03 18:51:58] 2026-02-03 23:51:05,333 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-03 18:51:58] 2026-02-03 23:51:05,333 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-03 18:51:58] 2026-02-03 23:51:05,333 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-03 18:51:58] 2026-02-03 23:51:05,334 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-03 18:51:58] 2026-02-03 23:51:05,334 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-03 18:51:58] 2026-02-03 23:51:05,334 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-03 18:51:58] 2026-02-03 23:51:05,334 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-03 18:51:58] 2026-02-03 23:51:05,334 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-03 18:51:58] 2026-02-03 23:51:05,334 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-03 18:51:58] 2026-02-03 23:51:05,335 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-03 18:51:58] 2026-02-03 23:51:05,335 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-03 18:51:58] 2026-02-03 23:51:05,335 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-03 18:51:58] 2026-02-03 23:51:05,335 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-03 18:51:58] 2026-02-03 23:51:05,335 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-03 18:51:58] 2026-02-03 23:51:05,335 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-03 18:51:58] 2026-02-03 23:51:05,335 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-03 18:51:58] 2026-02-03 23:51:05,336 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-03 18:51:58] 2026-02-03 23:51:05,336 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-03 18:51:58] 2026-02-03 23:51:05,336 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-03 18:51:58] 2026-02-03 23:51:05,336 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-03 18:51:58] 2026-02-03 23:51:05,336 | INFO     | job 6994196644 has completed (purged errors)
[2026-02-03 18:51:58] 2026-02-03 23:51:05,375 | INFO     | overall cleanup function is called
[2026-02-03 18:51:58] 2026-02-03 23:51:06,419 | INFO     | --- collectZombieJob: --- 10, [1147521]
[2026-02-03 18:51:58] 2026-02-03 23:51:06,420 | INFO     | zombie collector waiting for pid 1147521
[2026-02-03 18:51:58] 2026-02-03 23:51:06,420 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-03 18:51:58] 2026-02-03 23:51:06,420 | INFO     | collected zombie processes
[2026-02-03 18:51:58] 2026-02-03 23:51:06,420 | INFO     | will attempt to kill all subprocesses of pid=1147521
[2026-02-03 18:51:58] 2026-02-03 23:51:09,063 | INFO     | PID=1143486 has CPU usage=17.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-03 18:51:58] 2026-02-03 23:51:09,200 | INFO     | .. there are 19 such processes running
[2026-02-03 18:51:58] 2026-02-03 23:51:09,321 | INFO     | process IDs to be killed: [1147521] (in reverse order)
[2026-02-03 18:51:58] 2026-02-03 23:51:10,195 | WARNING  | found no corresponding commands to process id(s)
[2026-02-03 18:51:58] 2026-02-03 23:51:10,195 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-03 18:51:58] 2026-02-03 23:51:10,226 | INFO     | did not find any defunct processes belonging to 1147521
[2026-02-03 18:51:58] 2026-02-03 23:51:10,266 | INFO     | did not find any defunct processes belonging to 1147521
[2026-02-03 18:51:58] 2026-02-03 23:51:10,266 | INFO     | ready for new job
[2026-02-03 18:51:58] 2026-02-03 23:51:10,266 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-03 18:51:58] 2026-02-03 23:51:10,273 | INFO     | **************************************
[2026-02-03 18:51:58] 2026-02-03 23:51:10,273 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-03 18:51:58] 2026-02-03 23:51:10,273 | INFO     | **************************************
[2026-02-03 18:51:58] 2026-02-03 23:51:10,274 | INFO     | 
[2026-02-03 18:51:58] 2026-02-03 23:51:10,276 | INFO     | architecture information:
[2026-02-03 18:51:58] 2026-02-03 23:51:10,280 | INFO     | executing command: cat /etc/os-release
[2026-02-03 18:51:58] 2026-02-03 23:51:10,308 | INFO     | cat /etc/os-release:
[2026-02-03 18:51:58] NAME="CentOS Linux"
[2026-02-03 18:51:58] VERSION="7 (Core)"
[2026-02-03 18:51:58] ID="centos"
[2026-02-03 18:51:58] ID_LIKE="rhel fedora"
[2026-02-03 18:51:58] VERSION_ID="7"
[2026-02-03 18:51:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-03 18:51:58] ANSI_COLOR="0;31"
[2026-02-03 18:51:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-03 18:51:58] HOME_URL="https://www.centos.org/"
[2026-02-03 18:51:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-03 18:51:58] 
[2026-02-03 18:51:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-03 18:51:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-03 18:51:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-03 18:51:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-03 18:51:58] 
[2026-02-03 18:51:58] 2026-02-03 23:51:10,308 | INFO     | **************************************
[2026-02-03 18:51:58] 2026-02-03 23:51:10,812 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-03 18:51:58] 2026-02-03 23:51:10,870 | INFO     | sufficient remaining disk space (51090817024 B)
[2026-02-03 18:51:58] 2026-02-03 23:51:10,871 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-03 18:51:58] 2026-02-03 23:51:10,871 | INFO     | current server update state: UPDATING_FINAL
[2026-02-03 18:51:58] 2026-02-03 23:51:10,871 | INFO     | update_server=False
[2026-02-03 18:51:58] 2026-02-03 23:51:10,871 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-03 18:51:58] 2026-02-03 23:51:10,872 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-03 18:51:58] 2026-02-03 23:51:10,872 | INFO     | aborting loop
[2026-02-03 18:51:58] 2026-02-03 23:51:11,240 | INFO     | all payload control threads have been joined
[2026-02-03 18:51:58] 2026-02-03 23:51:11,548 | INFO     | all job control threads have been joined
[2026-02-03 18:51:58] 2026-02-03 23:51:11,878 | INFO     | [job] retrieve thread has finished
[2026-02-03 18:51:58] 2026-02-03 23:51:11,895 | INFO     | [job] job monitor thread has finished
[2026-02-03 18:51:58] 2026-02-03 23:51:11,899 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-03 18:51:58] 2026-02-03 23:51:11,960 | INFO     | all data control threads have been joined
[2026-02-03 18:51:58] 2026-02-03 23:51:12,246 | INFO     | [payload] control thread has finished
[2026-02-03 18:51:58] 2026-02-03 23:51:12,287 | INFO     | [job] validate thread has finished
[2026-02-03 18:51:58] 2026-02-03 23:51:12,287 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-03 18:51:58] 2026-02-03 23:51:12,461 | INFO     | [job] create_data_payload thread has finished
[2026-02-03 18:51:58] 2026-02-03 23:51:12,554 | INFO     | [job] control thread has finished
[2026-02-03 18:51:58] 2026-02-03 23:51:12,818 | INFO     | [payload] validate_pre thread has finished
[2026-02-03 18:51:58] 2026-02-03 23:51:12,818 | INFO     | [payload] execute_payloads thread has finished
[2026-02-03 18:51:58] 2026-02-03 23:51:12,819 | INFO     | [data] copytool_in thread has finished
[2026-02-03 18:51:58] 2026-02-03 23:51:12,966 | INFO     | [data] control thread has finished
[2026-02-03 18:51:58] 2026-02-03 23:51:13,014 | INFO     | [payload] validate_post thread has finished
[2026-02-03 18:51:58] 2026-02-03 23:51:13,447 | INFO     | [payload] failed_post thread has finished
[2026-02-03 18:51:58] 2026-02-03 23:51:13,573 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-03 18:51:58] 2026-02-03 23:51:13,808 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-03 18:51:58] 2026-02-03 23:51:14,296 | INFO     | [data] copytool_out thread has finished
[2026-02-03 18:51:58] 2026-02-03 23:51:14,579 | INFO     | [job] queue monitor thread has finished
[2026-02-03 18:51:58] 2026-02-03 23:51:17,818 | INFO     | [data] queue_monitor thread has finished
[2026-02-03 18:51:58] 2026-02-03 23:51:42,029 | INFO     | PID=1143486 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-03 18:51:58] 2026-02-03 23:51:42,029 | INFO     | .. there are 18 such processes running
[2026-02-03 18:51:58] 2026-02-03 23:51:42,030 | INFO     | found 0 job(s) in 20 queues
[2026-02-03 18:51:58] 2026-02-03 23:51:42,030 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-03 18:51:58] 2026-02-03 23:51:42,030 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-03 18:51:58] 2026-02-03 23:51:51,897 | INFO     | [monitor] cgroup control has ended
[2026-02-03 18:51:58] 2026-02-03 23:51:52,099 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140381364164416)>', '<ExcThread(monitor, started 140381006067456)>']
[2026-02-03 18:51:58] 2026-02-03 23:51:52,102 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-03 18:51:58] 2026-02-03 23:51:52,103 | INFO     | [monitor] control thread has ended
[2026-02-03 18:51:58] 2026-02-03 23:51:57,125 | INFO     | all workflow threads have been joined
[2026-02-03 18:51:58] 2026-02-03 23:51:57,125 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-03 18:51:58] 2026-02-03 23:51:57,125 | INFO     | traces error code: 0
[2026-02-03 18:51:58] 2026-02-03 23:51:57,126 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-03 18:51:58] 2026-02-03 23:51:57,302 [wrapper] ==== pilot stdout END ====
[2026-02-03 18:51:58] 2026-02-03 23:51:57,323 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-03 18:51:58] 2026-02-03 23:51:57,337 [wrapper] pilotpid: 1143486
[2026-02-03 18:51:58] 2026-02-03 23:51:57,349 [wrapper] Pilot exit status: 0
[2026-02-03 18:51:58] 2026-02-03 23:51:57,493 [wrapper] pandaids: 6994196644 6994196644
[2026-02-03 18:51:58] 2026-02-03 23:51:57,639 [wrapper] cleanup supervisor_pilot 3706674 1143487
[2026-02-03 18:51:58] 2026-02-03 23:51:57,642 [wrapper] Test setup, not cleaning
[2026-02-03 18:51:58] 2026-02-03 23:51:57,645 [wrapper] apfmon messages muted
[2026-02-03 18:51:58] 2026-02-03 23:51:57,703 [wrapper] ==== wrapper stdout END ====
[2026-02-03 18:51:58] 2026-02-03 23:51:57,767 [wrapper] ==== wrapper stderr END ====
[2026-02-03 18:51:58]  *** Error codes and diagnostics ***
[2026-02-03 18:51:59]     "exeErrorCode": 0,
[2026-02-03 18:51:59]     "exeErrorDiag": "",
[2026-02-03 18:51:59]     "pilotErrorCode": 0,
[2026-02-03 18:51:59]     "pilotErrorDiag": "",
[2026-02-03 18:51:59]  *** Listing of results directory ***
[2026-02-03 18:51:59] total 1158852
[2026-02-03 18:51:59] drwx------. 5 boincer umatlas      4096 Jan 14 05:00 pilot3
[2026-02-03 18:51:59] -rw-r--r--. 1 boincer umatlas    584422 Feb  3 06:11 pilot3.tar.gz
[2026-02-03 18:51:59] -rwx------. 1 boincer umatlas     36322 Feb  3 06:13 runpilot2-wrapper.sh
[2026-02-03 18:51:59] -rw-r--r--. 1 boincer umatlas      5111 Feb  3 06:14 queuedata.json
[2026-02-03 18:51:59] -rw-r--r--. 1 boincer umatlas       100 Feb  3 13:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-03 18:51:59] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  3 13:00 run_atlas
[2026-02-03 18:51:59] -rw-r--r--. 1 boincer umatlas       105 Feb  3 13:00 job.xml
[2026-02-03 18:51:59] -rw-r--r--. 3 boincer umatlas 496969623 Feb  3 13:00 EVNT.48442096._000017.pool.root.1
[2026-02-03 18:51:59] -rw-r--r--. 3 boincer umatlas 496969623 Feb  3 13:00 ATLAS.root_0
[2026-02-03 18:51:59] -rw-r--r--. 2 boincer umatlas    597756 Feb  3 13:00 input.tar.gz
[2026-02-03 18:51:59] -rw-r--r--. 2 boincer umatlas     15845 Feb  3 13:00 start_atlas.sh
[2026-02-03 18:51:59] drwxrwx--x. 2 boincer umatlas      4096 Feb  3 13:00 shared
[2026-02-03 18:51:59] -rw-r--r--. 1 boincer umatlas         0 Feb  3 13:00 boinc_lockfile
[2026-02-03 18:51:59] -rw-r--r--. 1 boincer umatlas      2526 Feb  3 13:07 pandaJob.out
[2026-02-03 18:51:59] -rw-------. 1 boincer umatlas        57 Feb  3 13:07 setup.sh.local
[2026-02-03 18:51:59] -rw-------. 1 boincer umatlas   1009268 Feb  3 13:08 agis_schedconf.cvmfs.json
[2026-02-03 18:51:59] -rw-------. 1 boincer umatlas       442 Feb  3 13:08 workernode_map.json
[2026-02-03 18:51:59] -rw-------. 1 boincer umatlas 182673764 Feb  3 18:49 HITS.48442098._000814.pool.root.1
[2026-02-03 18:51:59] -rw-r--r--. 1 boincer umatlas      6524 Feb  3 18:49 init_data.xml
[2026-02-03 18:51:59] -rw-r--r--. 1 boincer umatlas       531 Feb  3 18:49 boinc_task_state.xml
[2026-02-03 18:51:59] -rw-------. 1 boincer umatlas      1045 Feb  3 18:50 memory_monitor_summary.json
[2026-02-03 18:51:59] -rw-------. 1 boincer umatlas   1511668 Feb  3 18:50 agis_ddmendpoints.agis.ALL.json
[2026-02-03 18:51:59] -rw-------. 1 boincer umatlas    588793 Feb  3 18:51 log.48442098._000814.job.log.tgz.1
[2026-02-03 18:51:59] -rw-------. 1 boincer umatlas      6382 Feb  3 18:51 heartbeat.json
[2026-02-03 18:51:59] -rw-r--r--. 1 boincer umatlas      8192 Feb  3 18:51 boinc_mmap_file
[2026-02-03 18:51:59] -rw-r--r--. 1 boincer umatlas        28 Feb  3 18:51 wrapper_checkpoint.txt
[2026-02-03 18:51:59] -rw-------. 1 boincer umatlas        96 Feb  3 18:51 pilot_heartbeat.json
[2026-02-03 18:51:59] -rw-------. 1 boincer umatlas      4820 Feb  3 18:51 pilotlog.txt
[2026-02-03 18:51:59] -rw-------. 1 boincer umatlas   2461708 Feb  3 18:51 log.48442098._000814.job.log.1
[2026-02-03 18:51:59] -rw-------. 1 boincer umatlas       357 Feb  3 18:51 output.list
[2026-02-03 18:51:59] -rw-r--r--. 1 boincer umatlas       620 Feb  3 18:51 runtime_log
[2026-02-03 18:51:59] -rw-------. 1 boincer umatlas   3072000 Feb  3 18:51 result.tar.gz
[2026-02-03 18:51:59] -rw-------. 1 boincer umatlas       782 Feb  3 18:51 YFJMDmIWT78nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmcxUKDm9nnHKn.diag
[2026-02-03 18:51:59] -rw-r--r--. 1 boincer umatlas      9429 Feb  3 18:51 runtime_log.err
[2026-02-03 18:51:59] -rw-r--r--. 1 boincer umatlas     23524 Feb  3 18:51 stderr.txt
[2026-02-03 18:51:59] HITS file was successfully produced:
[2026-02-03 18:51:59] -rw-------. 1 boincer umatlas 182673764 Feb  3 18:49 shared/HITS.pool.root.1
[2026-02-03 18:51:59]  *** Contents of shared directory: ***
[2026-02-03 18:51:59] total 667324
[2026-02-03 18:51:59] -rw-r--r--. 3 boincer umatlas 496969623 Feb  3 13:00 ATLAS.root_0
[2026-02-03 18:51:59] -rw-r--r--. 2 boincer umatlas    597756 Feb  3 13:00 input.tar.gz
[2026-02-03 18:51:59] -rw-r--r--. 2 boincer umatlas     15845 Feb  3 13:00 start_atlas.sh
[2026-02-03 18:51:59] -rw-------. 1 boincer umatlas 182673764 Feb  3 18:49 HITS.pool.root.1
[2026-02-03 18:51:59] -rw-------. 1 boincer umatlas   3072000 Feb  3 18:51 result.tar.gz
18:52:00 (1137128): run_atlas exited; CPU time 77394.252035
18:52:00 (1137128): called boinc_finish(0)

</stderr_txt>
]]>

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