Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:54:47 (3904897): wrapper (7.7.26015): starting
21:54:47 (3904897): wrapper: running run_atlas (--nthreads 8)
[2026-02-03 21:54:47] Arguments: --nthreads 8
[2026-02-03 21:54:47] Threads: 8
[2026-02-03 21:54:47] Checking for CVMFS
[2026-02-03 21:54:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-03 21:54:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-03 21:54:49] Running cvmfs_config stat atlas.cern.ch
[2026-02-03 21:54:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-03 21:54:50] 2.13.3.0 9277 130232 340592 155851 2 336 26021123 32935936 25713 16776704 0 648563152 99.736 446379995 32832 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-03 21:54:50] CVMFS is ok
[2026-02-03 21:54:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-03 21:54:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-03 21:54:50] Further information can be found at the LHC@home message board.
[2026-02-03 21:54:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 21:54:50] Checking for apptainer binary...
[2026-02-03 21:54:50] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-03 21:54:50] Running /usr/bin/apptainer --version
[2026-02-03 21:54:50] apptainer version 1.4.5-2.el9
[2026-02-03 21:54:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 21:54:51] c-5-2.aglt2.org
[2026-02-03 21:54:51] apptainer works
[2026-02-03 21:54:51] Set ATHENA_PROC_NUMBER=8
[2026-02-03 21:54:51] Set ATHENA_CORE_NUMBER=8
[2026-02-03 21:54:51] Starting ATLAS job with PandaID=6999847213
[2026-02-03 21:54:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 11:49:07]  *** The last 200 lines of the pilot log: ***
[2026-02-04 11:49:07] 2026-02-04 16:48:26,345 | INFO     | job 6999847213 has state=finished
[2026-02-04 11:49:07] 2026-02-04 16:48:26,345 | INFO     | preparing for final server update for job 6999847213 in state='finished'
[2026-02-04 11:49:07] 2026-02-04 16:48:26,345 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6999847213/jobReport.json
[2026-02-04 11:49:07] 2026-02-04 16:48:26,378 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-02-04 11:49:07] 2026-02-04 16:48:26,379 | INFO     | this job has now completed (state=finished)
[2026-02-04 11:49:07] 2026-02-04 16:48:26,379 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-04 11:49:07] 2026-02-04 16:48:26,379 | INFO     | log transfer has been attempted: DONE
[2026-02-04 11:49:07] 2026-02-04 16:48:26,379 | INFO     | job 6999847213 has finished - writing final server update
[2026-02-04 11:49:07] 2026-02-04 16:48:26,380 | INFO     | total number of processed events: 400 (read)
[2026-02-04 11:49:07] 2026-02-04 16:48:26,387 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6999847213/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 11:49:07] 2026-02-04 16:48:26,387 | INFO     | extracted standard info from prmon json
[2026-02-04 11:49:07] 2026-02-04 16:48:26,387 | INFO     | extracted standard memory fields from prmon json
[2026-02-04 11:49:07] 2026-02-04 16:48:26,387 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-04 11:49:07] 2026-02-04 16:48:26,388 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-04 11:49:07] 2026-02-04 16:48:26,388 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-04 11:49:07] 2026-02-04 16:48:26,404 | INFO     | fitting pss+swap vs Time
[2026-02-04 11:49:07] 2026-02-04 16:48:26,405 | INFO     | sum of square deviations: 169099615683.76974
[2026-02-04 11:49:07] 2026-02-04 16:48:26,448 | INFO     | sum of deviations: 273200648700.0538
[2026-02-04 11:49:07] 2026-02-04 16:48:26,448 | INFO     | mean x: 1770198766.1003673
[2026-02-04 11:49:07] 2026-02-04 16:48:26,448 | INFO     | mean y: 2515882.487148103
[2026-02-04 11:49:07] 2026-02-04 16:48:26,448 | INFO     | intersect: -2857451890.1839824
[2026-02-04 11:49:07] 2026-02-04 16:48:26,449 | INFO     | chi2: 3.004686899552826
[2026-02-04 11:49:07] 2026-02-04 16:48:26,451 | INFO     | sum of square deviations: 166013945628.7194
[2026-02-04 11:49:07] 2026-02-04 16:48:26,490 | INFO     | sum of deviations: 324401594313.81335
[2026-02-04 11:49:07] 2026-02-04 16:48:26,491 | INFO     | mean x: 1770198613.6009853
[2026-02-04 11:49:07] 2026-02-04 16:48:26,491 | INFO     | mean y: 2518399.7339901477
[2026-02-04 11:49:07] 2026-02-04 16:48:26,491 | INFO     | intersect: -3456559994.7314386
[2026-02-04 11:49:07] 2026-02-04 16:48:26,504 | INFO     | chi2: 2.2628081010067445
[2026-02-04 11:49:07] 2026-02-04 16:48:26,505 | INFO     | current chi2=2.2628081010067445 (change=24.69071897828995 %)
[2026-02-04 11:49:07] 2026-02-04 16:48:26,505 | INFO     | right removable region: 811
[2026-02-04 11:49:07] 2026-02-04 16:48:26,506 | INFO     | sum of square deviations: 166013895608.7193
[2026-02-04 11:49:07] 2026-02-04 16:48:26,544 | INFO     | sum of deviations: 89135067400.93085
[2026-02-04 11:49:07] 2026-02-04 16:48:26,544 | INFO     | mean x: 1770198918.6009853
[2026-02-04 11:49:07] 2026-02-04 16:48:26,544 | INFO     | mean y: 2524964.3362068967
[2026-02-04 11:49:07] 2026-02-04 16:48:26,545 | INFO     | intersect: -947918366.5910057
[2026-02-04 11:49:07] 2026-02-04 16:48:26,546 | INFO     | chi2: 0.8773090273785284
[2026-02-04 11:49:07] 2026-02-04 16:48:26,546 | INFO     | current chi2=0.8773090273785284 (change=70.8019818135096 %)
[2026-02-04 11:49:07] 2026-02-04 16:48:26,548 | INFO     | sum of square deviations: 162965993336.86966
[2026-02-04 11:49:07] 2026-02-04 16:48:26,565 | INFO     | sum of deviations: 47906426382.36821
[2026-02-04 11:49:07] 2026-02-04 16:48:26,565 | INFO     | mean x: 1770199071.1003718
[2026-02-04 11:49:07] 2026-02-04 16:48:26,565 | INFO     | mean y: 2527026.4399008676
[2026-02-04 11:49:07] 2026-02-04 16:48:26,565 | INFO     | intersect: -517850935.5224271
[2026-02-04 11:49:07] 2026-02-04 16:48:26,566 | INFO     | chi2: 0.780992792491425
[2026-02-04 11:49:07] 2026-02-04 16:48:26,567 | INFO     | current chi2=0.780992792491425 (change=10.978598405045977 %)
[2026-02-04 11:49:07] 2026-02-04 16:48:26,567 | INFO     | left removable region: 20
[2026-02-04 11:49:07] 2026-02-04 16:48:26,568 | INFO     | sum of square deviations: 153463700524.70557
[2026-02-04 11:49:07] 2026-02-04 16:48:26,589 | INFO     | sum of deviations: 95801022186.75613
[2026-02-04 11:49:07] 2026-02-04 16:48:26,589 | INFO     | mean x: 1770199193.102402
[2026-02-04 11:49:07] 2026-02-04 16:48:26,589 | INFO     | mean y: 2529773.4968394437
[2026-02-04 11:49:07] 2026-02-04 16:48:26,589 | INFO     | intersect: -1102532150.5513158
[2026-02-04 11:49:07] 2026-02-04 16:48:26,595 | INFO     | chi2: 0.010479600239452805
[2026-02-04 11:49:07] 2026-02-04 16:48:26,595 | INFO     | current memory leak: 0.62 B/s (using 791 data points, chi2=0.01)
[2026-02-04 11:49:07] 2026-02-04 16:48:26,596 | INFO     | could have reported an average CPU frequency of 2599 MHz (31 samples)
[2026-02-04 11:49:07] 2026-02-04 16:48:26,596 | INFO     | ..............................
[2026-02-04 11:49:07] 2026-02-04 16:48:26,597 | INFO     | . Timing measurements:
[2026-02-04 11:49:07] 2026-02-04 16:48:26,597 | INFO     | . get job = 0 s
[2026-02-04 11:49:07] 2026-02-04 16:48:26,597 | INFO     | . initial setup = 35 s
[2026-02-04 11:49:07] 2026-02-04 16:48:26,597 | INFO     | . payload setup = 41 s
[2026-02-04 11:49:07] 2026-02-04 16:48:26,597 | INFO     | . stage-in = 0 s
[2026-02-04 11:49:07] 2026-02-04 16:48:26,597 | INFO     | . payload execution = 49846 s
[2026-02-04 11:49:07] 2026-02-04 16:48:26,597 | INFO     | . stage-out = 4 s
[2026-02-04 11:49:07] 2026-02-04 16:48:26,597 | INFO     | . log creation = 0 s
[2026-02-04 11:49:07] 2026-02-04 16:48:26,597 | INFO     | ..............................
[2026-02-04 11:49:07] 2026-02-04 16:48:26,761 | INFO     | 
[2026-02-04 11:49:07] 2026-02-04 16:48:26,762 | INFO     | job summary report
[2026-02-04 11:49:07] 2026-02-04 16:48:26,763 | INFO     | --------------------------------------------------
[2026-02-04 11:49:07] 2026-02-04 16:48:26,763 | INFO     | PanDA job id: 6999847213
[2026-02-04 11:49:07] 2026-02-04 16:48:26,763 | INFO     | task id: 48317892
[2026-02-04 11:49:07] 2026-02-04 16:48:26,763 | INFO     | errors: (none)
[2026-02-04 11:49:07] 2026-02-04 16:48:26,763 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 11:49:07] 2026-02-04 16:48:26,763 | INFO     | pilot state: finished 
[2026-02-04 11:49:07] 2026-02-04 16:48:26,763 | INFO     | transexitcode: 0
[2026-02-04 11:49:07] 2026-02-04 16:48:26,763 | INFO     | exeerrorcode: 0
[2026-02-04 11:49:07] 2026-02-04 16:48:26,763 | INFO     | exeerrordiag: 
[2026-02-04 11:49:07] 2026-02-04 16:48:26,763 | INFO     | exitcode: 0
[2026-02-04 11:49:07] 2026-02-04 16:48:26,764 | INFO     | exitmsg: OK
[2026-02-04 11:49:07] 2026-02-04 16:48:26,764 | INFO     | cpuconsumptiontime: 53077 s
[2026-02-04 11:49:07] 2026-02-04 16:48:26,764 | INFO     | nevents: 400
[2026-02-04 11:49:07] 2026-02-04 16:48:26,764 | INFO     | neventsw: 0
[2026-02-04 11:49:07] 2026-02-04 16:48:26,764 | INFO     | pid: 3926359
[2026-02-04 11:49:07] 2026-02-04 16:48:26,764 | INFO     | pgrp: 3926359
[2026-02-04 11:49:07] 2026-02-04 16:48:26,764 | INFO     | corecount: 8
[2026-02-04 11:49:07] 2026-02-04 16:48:26,764 | INFO     | event service: False
[2026-02-04 11:49:07] 2026-02-04 16:48:26,764 | INFO     | sizes: {0: 2277792, 1: 2273887, 2: 2278253, 13: 2278281, 49892: 2325713, 49897: 2334711, 49900: 2335089}
[2026-02-04 11:49:07] 2026-02-04 16:48:26,764 | INFO     | --------------------------------------------------
[2026-02-04 11:49:07] 2026-02-04 16:48:26,765 | INFO     | 
[2026-02-04 11:49:07] 2026-02-04 16:48:26,765 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-04 11:49:07] 2026-02-04 16:48:26,812 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 11:49:07] 2026-02-04 16:48:26,812 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 11:49:07] 2026-02-04 16:48:26,812 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 11:49:07] 2026-02-04 16:48:26,812 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 11:49:07] 2026-02-04 16:48:26,812 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 11:49:07] 2026-02-04 16:48:26,813 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 11:49:07] 2026-02-04 16:48:26,813 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 11:49:07] 2026-02-04 16:48:26,813 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 11:49:07] 2026-02-04 16:48:26,813 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 11:49:07] 2026-02-04 16:48:26,813 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 11:49:07] 2026-02-04 16:48:26,813 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 11:49:07] 2026-02-04 16:48:26,813 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 11:49:07] 2026-02-04 16:48:26,813 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 11:49:07] 2026-02-04 16:48:26,813 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 11:49:07] 2026-02-04 16:48:26,814 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 11:49:07] 2026-02-04 16:48:26,814 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 11:49:07] 2026-02-04 16:48:26,814 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 11:49:07] 2026-02-04 16:48:26,814 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 11:49:07] 2026-02-04 16:48:26,814 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 11:49:07] 2026-02-04 16:48:26,814 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 11:49:07] 2026-02-04 16:48:26,814 | INFO     | job 6999847213 has completed (purged errors)
[2026-02-04 11:49:07] 2026-02-04 16:48:26,814 | INFO     | overall cleanup function is called
[2026-02-04 11:49:07] 2026-02-04 16:48:27,824 | INFO     | --- collectZombieJob: --- 10, [3926359]
[2026-02-04 11:49:07] 2026-02-04 16:48:27,824 | INFO     | zombie collector waiting for pid 3926359
[2026-02-04 11:49:07] 2026-02-04 16:48:27,824 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 11:49:07] 2026-02-04 16:48:27,824 | INFO     | collected zombie processes
[2026-02-04 11:49:07] 2026-02-04 16:48:27,824 | INFO     | will attempt to kill all subprocesses of pid=3926359
[2026-02-04 11:49:07] 2026-02-04 16:48:28,823 | INFO     | process IDs to be killed: [3926359] (in reverse order)
[2026-02-04 11:49:07] 2026-02-04 16:48:29,100 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 11:49:07] 2026-02-04 16:48:29,100 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 11:49:07] 2026-02-04 16:48:29,293 | INFO     | did not find any defunct processes belonging to 3926359
[2026-02-04 11:49:07] 2026-02-04 16:48:29,342 | INFO     | did not find any defunct processes belonging to 3926359
[2026-02-04 11:49:07] 2026-02-04 16:48:29,342 | INFO     | ready for new job
[2026-02-04 11:49:07] 2026-02-04 16:48:29,343 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 11:49:07] 2026-02-04 16:48:29,361 | INFO     | **************************************
[2026-02-04 11:49:07] 2026-02-04 16:48:29,361 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 11:49:07] 2026-02-04 16:48:29,361 | INFO     | **************************************
[2026-02-04 11:49:07] 2026-02-04 16:48:29,361 | INFO     | 
[2026-02-04 11:49:07] 2026-02-04 16:48:29,363 | INFO     | architecture information:
[2026-02-04 11:49:07] 2026-02-04 16:48:29,392 | INFO     | executing command: cat /etc/os-release
[2026-02-04 11:49:07] 2026-02-04 16:48:29,440 | INFO     | cat /etc/os-release:
[2026-02-04 11:49:07] NAME="CentOS Linux"
[2026-02-04 11:49:07] VERSION="7 (Core)"
[2026-02-04 11:49:07] ID="centos"
[2026-02-04 11:49:07] ID_LIKE="rhel fedora"
[2026-02-04 11:49:07] VERSION_ID="7"
[2026-02-04 11:49:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 11:49:07] ANSI_COLOR="0;31"
[2026-02-04 11:49:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 11:49:07] HOME_URL="https://www.centos.org/"
[2026-02-04 11:49:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 11:49:07] 
[2026-02-04 11:49:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 11:49:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 11:49:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 11:49:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 11:49:07] 
[2026-02-04 11:49:07] 2026-02-04 16:48:29,441 | INFO     | **************************************
[2026-02-04 11:49:07] 2026-02-04 16:48:29,944 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-04 11:49:07] 2026-02-04 16:48:30,013 | INFO     | sufficient remaining disk space (74814849024 B)
[2026-02-04 11:49:07] 2026-02-04 16:48:30,013 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 11:49:07] 2026-02-04 16:48:30,013 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 11:49:07] 2026-02-04 16:48:30,013 | INFO     | update_server=False
[2026-02-04 11:49:07] 2026-02-04 16:48:30,014 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 11:49:07] 2026-02-04 16:48:30,338 | INFO     | all job control threads have been joined
[2026-02-04 11:49:07] 2026-02-04 16:48:30,371 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-04 11:49:07] 2026-02-04 16:48:30,371 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-04 11:49:07] 2026-02-04 16:48:30,371 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 11:49:07] 2026-02-04 16:48:30,371 | INFO     | will abort loop
[2026-02-04 11:49:07] 2026-02-04 16:48:30,688 | INFO     | all payload control threads have been joined
[2026-02-04 11:49:07] 2026-02-04 16:48:31,020 | INFO     | [job] retrieve thread has finished
[2026-02-04 11:49:07] 2026-02-04 16:48:31,035 | INFO     | all data control threads have been joined
[2026-02-04 11:49:07] 2026-02-04 16:48:31,099 | INFO     | [data] copytool_in thread has finished
[2026-02-04 11:49:07] 2026-02-04 16:48:31,115 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 11:49:07] 2026-02-04 16:48:31,344 | INFO     | [job] control thread has finished
[2026-02-04 11:49:07] 2026-02-04 16:48:31,366 | INFO     | [payload] failed_post thread has finished
[2026-02-04 11:49:07] 2026-02-04 16:48:31,377 | INFO     | [job] job monitor thread has finished
[2026-02-04 11:49:07] 2026-02-04 16:48:31,399 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 11:49:07] 2026-02-04 16:48:31,514 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 11:49:07] 2026-02-04 16:48:31,705 | INFO     | [payload] control thread has finished
[2026-02-04 11:49:07] 2026-02-04 16:48:31,727 | INFO     | [job] validate thread has finished
[2026-02-04 11:49:07] 2026-02-04 16:48:31,818 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 11:49:07] 2026-02-04 16:48:32,044 | INFO     | [data] control thread has finished
[2026-02-04 11:49:07] 2026-02-04 16:48:32,114 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 11:49:07] 2026-02-04 16:48:32,121 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 11:49:07] 2026-02-04 16:48:32,158 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 11:49:07] 2026-02-04 16:48:32,524 | INFO     | [payload] validate_post thread has finished
[2026-02-04 11:49:07] 2026-02-04 16:48:32,830 | INFO     | [job] queue monitor thread has finished
[2026-02-04 11:49:07] 2026-02-04 16:48:33,122 | INFO     | [data] copytool_out thread has finished
[2026-02-04 11:49:07] 2026-02-04 16:48:36,123 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 11:49:07] 2026-02-04 16:48:59,103 | INFO     | PID=3912693 has CPU usage=4.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-04 11:49:07] 2026-02-04 16:48:59,103 | INFO     | .. there are 32 such processes running
[2026-02-04 11:49:07] 2026-02-04 16:48:59,104 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 11:49:07] 2026-02-04 16:48:59,104 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 11:49:07] 2026-02-04 16:48:59,105 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 11:49:07] 2026-02-04 16:49:00,723 | INFO     | [monitor] cgroup control has ended
[2026-02-04 11:49:07] 2026-02-04 16:49:01,742 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140457512437568)>', '<ExcThread(monitor, started 140457023624960)>']
[2026-02-04 11:49:07] 2026-02-04 16:49:02,132 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 11:49:07] 2026-02-04 16:49:02,132 | INFO     | [monitor] control thread has ended
[2026-02-04 11:49:07] 2026-02-04 16:49:06,768 | INFO     | all workflow threads have been joined
[2026-02-04 11:49:07] 2026-02-04 16:49:06,769 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 11:49:07] 2026-02-04 16:49:06,769 | INFO     | traces error code: 0
[2026-02-04 11:49:07] 2026-02-04 16:49:06,769 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 11:49:07] 2026-02-04 16:49:06,964 [wrapper] ==== pilot stdout END ====
[2026-02-04 11:49:07] 2026-02-04 16:49:06,971 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 11:49:07] 2026-02-04 16:49:06,974 [wrapper] pilotpid: 3912693
[2026-02-04 11:49:07] 2026-02-04 16:49:06,977 [wrapper] Pilot exit status: 0
[2026-02-04 11:49:07] 2026-02-04 16:49:06,990 [wrapper] pandaids: 6999847213
[2026-02-04 11:49:07] 2026-02-04 16:49:07,076 [wrapper] cleanup supervisor_pilot 3520343 3912694
[2026-02-04 11:49:07] 2026-02-04 16:49:07,080 [wrapper] Test setup, not cleaning
[2026-02-04 11:49:07] 2026-02-04 16:49:07,085 [wrapper] apfmon messages muted
[2026-02-04 11:49:07] 2026-02-04 16:49:07,088 [wrapper] ==== wrapper stdout END ====
[2026-02-04 11:49:07] 2026-02-04 16:49:07,091 [wrapper] ==== wrapper stderr END ====
[2026-02-04 11:49:07]  *** Error codes and diagnostics ***
[2026-02-04 11:49:07]     "exeErrorCode": 0,
[2026-02-04 11:49:07]     "exeErrorDiag": "",
[2026-02-04 11:49:07]     "pilotErrorCode": 0,
[2026-02-04 11:49:07]     "pilotErrorDiag": "",
[2026-02-04 11:49:07]  *** Listing of results directory ***
[2026-02-04 11:49:07] total 685488
[2026-02-04 11:49:07] -rw-r--r--. 1 boincer umatlas      5111 Feb  3 12:16 queuedata.json
[2026-02-04 11:49:07] -rwx------. 1 boincer umatlas     36322 Feb  3 12:16 runpilot2-wrapper.sh
[2026-02-04 11:49:07] -rw-r--r--. 1 boincer umatlas    584422 Feb  3 12:17 pilot3.tar.gz
[2026-02-04 11:49:07] -rw-r--r--. 1 boincer umatlas       100 Feb  3 21:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 11:49:07] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  3 21:54 run_atlas
[2026-02-04 11:49:07] -rw-r--r--. 1 boincer umatlas       105 Feb  3 21:54 job.xml
[2026-02-04 11:49:07] -rw-r--r--. 2 boincer umatlas 495358912 Feb  3 21:54 EVNT.48317889._000228.pool.root.1
[2026-02-04 11:49:07] -rw-r--r--. 2 boincer umatlas     15845 Feb  3 21:54 start_atlas.sh
[2026-02-04 11:49:07] drwxrwx--x. 2 boincer umatlas      4096 Feb  3 21:54 shared
[2026-02-04 11:49:07] -rw-r--r--. 2 boincer umatlas    597762 Feb  3 21:54 input.tar.gz
[2026-02-04 11:49:07] -rw-r--r--. 1 boincer umatlas         0 Feb  3 21:54 boinc_lockfile
[2026-02-04 11:49:07] -rw-r--r--. 1 boincer umatlas      2523 Feb  3 21:54 pandaJob.out
[2026-02-04 11:49:07] -rw-------. 1 boincer umatlas        57 Feb  3 21:54 setup.sh.local
[2026-02-04 11:49:07] -rw-------. 1 boincer umatlas   1009244 Feb  3 21:55 agis_schedconf.cvmfs.json
[2026-02-04 11:49:07] -rw-------. 1 boincer umatlas       439 Feb  3 21:56 workernode_map.json
[2026-02-04 11:49:07] drwx------. 5 boincer umatlas      4096 Feb  3 21:56 pilot3
[2026-02-04 11:49:07] -rw-r--r--. 1 boincer umatlas      6658 Feb  4 11:38 init_data.xml
[2026-02-04 11:49:07] -rw-------. 1 boincer umatlas 188175653 Feb  4 11:47 HITS.48317892._011998.pool.root.1
[2026-02-04 11:49:07] -rw-r--r--. 1 boincer umatlas       532 Feb  4 11:47 boinc_task_state.xml
[2026-02-04 11:49:07] -rw-------. 1 boincer umatlas      1046 Feb  4 11:48 memory_monitor_summary.json
[2026-02-04 11:49:07] -rw-------. 1 boincer umatlas   1511668 Feb  4 11:48 agis_ddmendpoints.agis.ALL.json
[2026-02-04 11:49:07] -rw-------. 1 boincer umatlas    945533 Feb  4 11:48 log.48317892._011998.job.log.tgz.1
[2026-02-04 11:49:07] -rw-------. 1 boincer umatlas        95 Feb  4 11:48 pilot_heartbeat.json
[2026-02-04 11:49:07] -rw-------. 1 boincer umatlas      6389 Feb  4 11:48 heartbeat.json
[2026-02-04 11:49:07] -rw-r--r--. 1 boincer umatlas      8192 Feb  4 11:48 boinc_mmap_file
[2026-02-04 11:49:07] -rw-r--r--. 1 boincer umatlas        28 Feb  4 11:48 wrapper_checkpoint.txt
[2026-02-04 11:49:07] -rw-------. 1 boincer umatlas      5006 Feb  4 11:49 pilotlog.txt
[2026-02-04 11:49:07] -rw-------. 1 boincer umatlas   6285984 Feb  4 11:49 log.48317892._011998.job.log.1
[2026-02-04 11:49:07] -rw-------. 1 boincer umatlas       357 Feb  4 11:49 output.list
[2026-02-04 11:49:07] -rw-r--r--. 1 boincer umatlas       620 Feb  4 11:49 runtime_log
[2026-02-04 11:49:07] -rw-------. 1 boincer umatlas   7249920 Feb  4 11:49 result.tar.gz
[2026-02-04 11:49:07] -rw-r--r--. 1 boincer umatlas      9327 Feb  4 11:49 runtime_log.err
[2026-02-04 11:49:07] -rw-------. 1 boincer umatlas       655 Feb  4 11:49 Qo4NDmpBZ78n9Rq4apOajLDm4fhM0noT9bVooX4SDmf6UKDmzELeAo.diag
[2026-02-04 11:49:07] -rw-r--r--. 1 boincer umatlas     21318 Feb  4 11:49 stderr.txt
[2026-02-04 11:49:07] HITS file was successfully produced:
[2026-02-04 11:49:07] -rw-------. 1 boincer umatlas 188175653 Feb  4 11:47 shared/HITS.pool.root.1
[2026-02-04 11:49:07]  *** Contents of shared directory: ***
[2026-02-04 11:49:07] total 675204
[2026-02-04 11:49:07] -rw-r--r--. 2 boincer umatlas 495358912 Feb  3 21:54 ATLAS.root_0
[2026-02-04 11:49:07] -rw-r--r--. 2 boincer umatlas     15845 Feb  3 21:54 start_atlas.sh
[2026-02-04 11:49:07] -rw-r--r--. 2 boincer umatlas    597762 Feb  3 21:54 input.tar.gz
[2026-02-04 11:49:07] -rw-------. 1 boincer umatlas 188175653 Feb  4 11:47 HITS.pool.root.1
[2026-02-04 11:49:07] -rw-------. 1 boincer umatlas   7249920 Feb  4 11:49 result.tar.gz
11:49:08 (3904897): run_atlas exited; CPU time 55793.858442
11:49:08 (3904897): called boinc_finish(0)

</stderr_txt>
]]>

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