Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:32:08 (4164110): wrapper (7.7.26015): starting
11:32:08 (4164110): wrapper: running run_atlas (--nthreads 8)
[2026-02-03 11:32:08] Arguments: --nthreads 8
[2026-02-03 11:32:08] Threads: 8
[2026-02-03 11:32:08] Checking for CVMFS
[2026-02-03 11:32:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-03 11:32:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-03 11:32:09] Running cvmfs_config stat atlas.cern.ch
[2026-02-03 11:32:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-03 11:32:09] 2.13.3.0 7236 59122 211352 155837 2 690 26902289 40960001 23218 16776704 0 211208299 99.693 169343993 37304 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-03 11:32:09] CVMFS is ok
[2026-02-03 11:32:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-03 11:32:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-03 11:32:09] Further information can be found at the LHC@home message board.
[2026-02-03 11:32:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 11:32:09] Checking for apptainer binary...
[2026-02-03 11:32:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-03 11:32:09] Running /usr/bin/apptainer --version
[2026-02-03 11:32:09] apptainer version 1.4.5-2.el9
[2026-02-03 11:32:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 11:32:09] c-212-11.aglt2.org
[2026-02-03 11:32:09] apptainer works
[2026-02-03 11:32:10] Set ATHENA_PROC_NUMBER=8
[2026-02-03 11:32:10] Set ATHENA_CORE_NUMBER=8
[2026-02-03 11:32:10] Starting ATLAS job with PandaID=6994862163
[2026-02-03 11:32:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
13:20:11 (4164110): BOINC client no longer exists - exiting
13:20:11 (4164110): timer handler: client dead, exiting
13:30:20 (551284): wrapper (7.7.26015): starting
13:30:20 (551284): wrapper: running run_atlas (--nthreads 9)
[2026-02-03 13:30:20] Arguments: --nthreads 9
[2026-02-03 13:30:20] Threads: 9
[2026-02-03 13:30:20] This job has been restarted, cleaning up previous attempt
[2026-02-03 13:30:20] Checking for CVMFS
[2026-02-03 13:30:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-03 13:30:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-03 13:30:20] Running cvmfs_config stat atlas.cern.ch
[2026-02-03 13:30:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-03 13:30:20] 2.13.3.0 7236 59240 193908 155840 0 185 29981175 40960000 11742 16776704 0 212010053 99.691 170050738 37290 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-03 13:30:20] CVMFS is ok
[2026-02-03 13:30:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-03 13:30:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-03 13:30:20] Further information can be found at the LHC@home message board.
[2026-02-03 13:30:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 13:30:20] Checking for apptainer binary...
[2026-02-03 13:30:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-03 13:30:20] Running /usr/bin/apptainer --version
[2026-02-03 13:30:20] apptainer version 1.4.5-2.el9
[2026-02-03 13:30:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 13:30:20] c-212-11.aglt2.org
[2026-02-03 13:30:20] apptainer works
[2026-02-03 13:30:21] Set ATHENA_PROC_NUMBER=9
[2026-02-03 13:30:21] Set ATHENA_CORE_NUMBER=9
[2026-02-03 13:30:21] Starting ATLAS job with PandaID=6994862163
[2026-02-03 13:30:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-03 17:52:07]  *** The last 200 lines of the pilot log: ***
[2026-02-03 17:52:07] 2026-02-03 22:51:12,016 | INFO     | monitor loop #947: job 0:6994862163 is in state 'finished'
[2026-02-03 17:52:07] 2026-02-03 22:51:12,017 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-03 17:52:07] 2026-02-03 22:51:12,060 | INFO     | job 6994862163 has state=finished
[2026-02-03 17:52:07] 2026-02-03 22:51:12,060 | INFO     | preparing for final server update for job 6994862163 in state='finished'
[2026-02-03 17:52:07] 2026-02-03 22:51:12,060 | INFO     | reading metadata from: /tmp/boinchome/slots/6/PanDA_Pilot-6994862163/jobReport.json
[2026-02-03 17:52:07] 2026-02-03 22:51:12,064 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/6/workernode_map.json
[2026-02-03 17:52:07] 2026-02-03 22:51:12,065 | INFO     | this job has now completed (state=finished)
[2026-02-03 17:52:07] 2026-02-03 22:51:12,065 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-03 17:52:07] 2026-02-03 22:51:12,065 | INFO     | log transfer has been attempted: DONE
[2026-02-03 17:52:07] 2026-02-03 22:51:12,065 | INFO     | job 6994862163 has finished - writing final server update
[2026-02-03 17:52:07] 2026-02-03 22:51:12,065 | INFO     | total number of processed events: 400 (read)
[2026-02-03 17:52:07] 2026-02-03 22:51:12,177 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6994862163/memory_monitor_summary.json (trf name=prmon)
[2026-02-03 17:52:07] 2026-02-03 22:51:12,177 | INFO     | extracted standard info from prmon json
[2026-02-03 17:52:07] 2026-02-03 22:51:12,177 | INFO     | extracted standard memory fields from prmon json
[2026-02-03 17:52:07] 2026-02-03 22:51:12,178 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-03 17:52:07] 2026-02-03 22:51:12,178 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-03 17:52:07] 2026-02-03 22:51:12,178 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-03 17:52:07] 2026-02-03 22:51:12,185 | INFO     | fitting pss+swap vs Time
[2026-02-03 17:52:07] 2026-02-03 22:51:12,186 | INFO     | sum of square deviations: 5202676763.4375
[2026-02-03 17:52:07] 2026-02-03 22:51:12,187 | INFO     | sum of deviations: 26891497530.703125
[2026-02-03 17:52:07] 2026-02-03 22:51:12,187 | INFO     | mean x: 1770151234.703125
[2026-02-03 17:52:07] 2026-02-03 22:51:12,191 | INFO     | mean y: 2551709.99609375
[2026-02-03 17:52:07] 2026-02-03 22:51:12,191 | INFO     | intersect: -9146972606.31732
[2026-02-03 17:52:07] 2026-02-03 22:51:12,192 | INFO     | chi2: 1.1500694829720843
[2026-02-03 17:52:07] 2026-02-03 22:51:12,192 | INFO     | sum of square deviations: 4903784693.227125
[2026-02-03 17:52:07] 2026-02-03 22:51:12,197 | INFO     | sum of deviations: 26385466029.18725
[2026-02-03 17:52:07] 2026-02-03 22:51:12,198 | INFO     | mean x: 1770151082.2071712
[2026-02-03 17:52:07] 2026-02-03 22:51:12,198 | INFO     | mean y: 2551451.784860558
[2026-02-03 17:52:07] 2026-02-03 22:51:12,198 | INFO     | intersect: -9521981978.611223
[2026-02-03 17:52:07] 2026-02-03 22:51:12,198 | INFO     | chi2: 1.15043405954935
[2026-02-03 17:52:07] 2026-02-03 22:51:12,198 | INFO     | current chi2=1.15043405954935 (change=-0.03170039572944567 %)
[2026-02-03 17:52:07] 2026-02-03 22:51:12,198 | INFO     | right removable region: 250
[2026-02-03 17:52:07] 2026-02-03 22:51:12,198 | INFO     | sum of square deviations: 4903752973.227126
[2026-02-03 17:52:07] 2026-02-03 22:51:12,200 | INFO     | sum of deviations: -3512810829.095617
[2026-02-03 17:52:07] 2026-02-03 22:51:12,200 | INFO     | mean x: 1770151387.2071712
[2026-02-03 17:52:07] 2026-02-03 22:51:12,200 | INFO     | mean y: 2567043.386454183
[2026-02-03 17:52:07] 2026-02-03 22:51:12,200 | INFO     | intersect: 1270617656.0639968
[2026-02-03 17:52:07] 2026-02-03 22:51:12,200 | INFO     | chi2: 0.010000508345017416
[2026-02-03 17:52:07] 2026-02-03 22:51:12,200 | INFO     | current chi2=0.010000508345017416 (change=99.13044311729988 %)
[2026-02-03 17:52:07] 2026-02-03 22:51:12,201 | INFO     | sum of square deviations: 4616503820.50811
[2026-02-03 17:52:07] 2026-02-03 22:51:12,202 | INFO     | sum of deviations: -3474849679.451222
[2026-02-03 17:52:07] 2026-02-03 22:51:12,202 | INFO     | mean x: 1770151539.7113822
[2026-02-03 17:52:07] 2026-02-03 22:51:12,202 | INFO     | mean y: 2567021.7682926827
[2026-02-03 17:52:07] 2026-02-03 22:51:12,202 | INFO     | intersect: 1334962867.0877013
[2026-02-03 17:52:07] 2026-02-03 22:51:12,203 | INFO     | chi2: 0.00994615733351712
[2026-02-03 17:52:07] 2026-02-03 22:51:12,203 | INFO     | current chi2=0.00994615733351712 (change=0.5434824873414994 %)
[2026-02-03 17:52:07] 2026-02-03 22:51:12,203 | INFO     | left removable region: 20
[2026-02-03 17:52:07] 2026-02-03 22:51:12,203 | INFO     | sum of square deviations: 3773089271.7434797
[2026-02-03 17:52:07] 2026-02-03 22:51:12,208 | INFO     | sum of deviations: -1303126216.1347828
[2026-02-03 17:52:07] 2026-02-03 22:51:12,208 | INFO     | mean x: 1770151661.7260869
[2026-02-03 17:52:07] 2026-02-03 22:51:12,208 | INFO     | mean y: 2565842.8391304347
[2026-02-03 17:52:07] 2026-02-03 22:51:12,209 | INFO     | intersect: 613929866.0030755
[2026-02-03 17:52:07] 2026-02-03 22:51:12,209 | INFO     | chi2: 0.008847233328975985
[2026-02-03 17:52:07] 2026-02-03 22:51:12,209 | INFO     | current memory leak: -0.35 B/s (using 230 data points, chi2=0.01)
[2026-02-03 17:52:07] 2026-02-03 22:51:12,209 | INFO     | could have reported an average CPU frequency of 3091 MHz (12 samples)
[2026-02-03 17:52:07] 2026-02-03 22:51:12,210 | INFO     | ..............................
[2026-02-03 17:52:07] 2026-02-03 22:51:12,210 | INFO     | . Timing measurements:
[2026-02-03 17:52:07] 2026-02-03 22:51:12,210 | INFO     | . get job = 0 s
[2026-02-03 17:52:07] 2026-02-03 22:51:12,210 | INFO     | . initial setup = 1 s
[2026-02-03 17:52:07] 2026-02-03 22:51:12,210 | INFO     | . payload setup = 7 s
[2026-02-03 17:52:07] 2026-02-03 22:51:12,210 | INFO     | . stage-in = 0 s
[2026-02-03 17:52:07] 2026-02-03 22:51:12,210 | INFO     | . payload execution = 15610 s
[2026-02-03 17:52:07] 2026-02-03 22:51:12,210 | INFO     | . stage-out = 3 s
[2026-02-03 17:52:07] 2026-02-03 22:51:12,210 | INFO     | . log creation = 0 s
[2026-02-03 17:52:07] 2026-02-03 22:51:12,210 | INFO     | ..............................
[2026-02-03 17:52:07] 2026-02-03 22:51:12,583 | INFO     | 
[2026-02-03 17:52:07] 2026-02-03 22:51:12,584 | INFO     | job summary report
[2026-02-03 17:52:07] 2026-02-03 22:51:12,584 | INFO     | --------------------------------------------------
[2026-02-03 17:52:07] 2026-02-03 22:51:12,584 | INFO     | PanDA job id: 6994862163
[2026-02-03 17:52:07] 2026-02-03 22:51:12,584 | INFO     | task id: 48317931
[2026-02-03 17:52:07] 2026-02-03 22:51:12,584 | INFO     | errors: (none)
[2026-02-03 17:52:07] 2026-02-03 22:51:12,585 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-03 17:52:07] 2026-02-03 22:51:12,585 | INFO     | pilot state: finished 
[2026-02-03 17:52:07] 2026-02-03 22:51:12,585 | INFO     | transexitcode: 0
[2026-02-03 17:52:07] 2026-02-03 22:51:12,585 | INFO     | exeerrorcode: 0
[2026-02-03 17:52:07] 2026-02-03 22:51:12,585 | INFO     | exeerrordiag: 
[2026-02-03 17:52:07] 2026-02-03 22:51:12,585 | INFO     | exitcode: 0
[2026-02-03 17:52:07] 2026-02-03 22:51:12,585 | INFO     | exitmsg: OK
[2026-02-03 17:52:07] 2026-02-03 22:51:12,585 | INFO     | cpuconsumptiontime: 31566 s
[2026-02-03 17:52:07] 2026-02-03 22:51:12,585 | INFO     | nevents: 400
[2026-02-03 17:52:07] 2026-02-03 22:51:12,585 | INFO     | neventsw: 0
[2026-02-03 17:52:07] 2026-02-03 22:51:12,585 | INFO     | pid: 581833
[2026-02-03 17:52:07] 2026-02-03 22:51:12,585 | INFO     | pgrp: 581833
[2026-02-03 17:52:07] 2026-02-03 22:51:12,585 | INFO     | corecount: 9
[2026-02-03 17:52:07] 2026-02-03 22:51:12,586 | INFO     | event service: False
[2026-02-03 17:52:07] 2026-02-03 22:51:12,586 | INFO     | sizes: {0: 2278209, 11: 2278209, 15621: 2309589, 15622: 2309588, 15626: 2318698, 15629: 2318836}
[2026-02-03 17:52:07] 2026-02-03 22:51:12,586 | INFO     | --------------------------------------------------
[2026-02-03 17:52:07] 2026-02-03 22:51:12,586 | INFO     | 
[2026-02-03 17:52:07] 2026-02-03 22:51:12,586 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2026-02-03 17:52:07] 2026-02-03 22:51:12,631 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-03 17:52:07] 2026-02-03 22:51:12,631 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-03 17:52:07] 2026-02-03 22:51:12,631 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-03 17:52:07] 2026-02-03 22:51:12,631 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-03 17:52:07] 2026-02-03 22:51:12,631 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-03 17:52:07] 2026-02-03 22:51:12,631 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-03 17:52:07] 2026-02-03 22:51:12,631 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-03 17:52:07] 2026-02-03 22:51:12,631 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-03 17:52:07] 2026-02-03 22:51:12,631 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-03 17:52:07] 2026-02-03 22:51:12,631 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-03 17:52:07] 2026-02-03 22:51:12,631 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-03 17:52:07] 2026-02-03 22:51:12,632 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-03 17:52:07] 2026-02-03 22:51:12,632 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-03 17:52:07] 2026-02-03 22:51:12,632 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-03 17:52:07] 2026-02-03 22:51:12,632 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-03 17:52:07] 2026-02-03 22:51:12,632 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-03 17:52:07] 2026-02-03 22:51:12,632 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-03 17:52:07] 2026-02-03 22:51:12,632 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-03 17:52:07] 2026-02-03 22:51:12,632 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-03 17:52:07] 2026-02-03 22:51:12,632 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-03 17:52:07] 2026-02-03 22:51:12,632 | INFO     | job 6994862163 has completed (purged errors)
[2026-02-03 17:52:07] 2026-02-03 22:51:12,632 | INFO     | overall cleanup function is called
[2026-02-03 17:52:07] 2026-02-03 22:51:13,645 | INFO     | --- collectZombieJob: --- 10, [581833]
[2026-02-03 17:52:07] 2026-02-03 22:51:13,646 | INFO     | zombie collector waiting for pid 581833
[2026-02-03 17:52:07] 2026-02-03 22:51:13,646 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-03 17:52:07] 2026-02-03 22:51:13,646 | INFO     | collected zombie processes
[2026-02-03 17:52:07] 2026-02-03 22:51:13,646 | INFO     | will attempt to kill all subprocesses of pid=581833
[2026-02-03 17:52:07] 2026-02-03 22:51:14,802 | INFO     | process IDs to be killed: [581833] (in reverse order)
[2026-02-03 17:52:07] 2026-02-03 22:51:15,285 | WARNING  | found no corresponding commands to process id(s)
[2026-02-03 17:52:07] 2026-02-03 22:51:15,286 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-03 17:52:07] 2026-02-03 22:51:15,341 | INFO     | did not find any defunct processes belonging to 581833
[2026-02-03 17:52:07] 2026-02-03 22:51:15,388 | INFO     | did not find any defunct processes belonging to 581833
[2026-02-03 17:52:07] 2026-02-03 22:51:15,388 | INFO     | ready for new job
[2026-02-03 17:52:07] 2026-02-03 22:51:15,388 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-03 17:52:07] 2026-02-03 22:51:15,395 | INFO     | **************************************
[2026-02-03 17:52:07] 2026-02-03 22:51:15,395 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-03 17:52:07] 2026-02-03 22:51:15,395 | INFO     | **************************************
[2026-02-03 17:52:07] 2026-02-03 22:51:15,395 | INFO     | 
[2026-02-03 17:52:07] 2026-02-03 22:51:15,404 | INFO     | architecture information:
[2026-02-03 17:52:07] 2026-02-03 22:51:15,407 | INFO     | executing command: cat /etc/os-release
[2026-02-03 17:52:07] 2026-02-03 22:51:15,569 | INFO     | cat /etc/os-release:
[2026-02-03 17:52:07] NAME="CentOS Linux"
[2026-02-03 17:52:07] VERSION="7 (Core)"
[2026-02-03 17:52:07] ID="centos"
[2026-02-03 17:52:07] ID_LIKE="rhel fedora"
[2026-02-03 17:52:07] VERSION_ID="7"
[2026-02-03 17:52:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-03 17:52:07] ANSI_COLOR="0;31"
[2026-02-03 17:52:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-03 17:52:07] HOME_URL="https://www.centos.org/"
[2026-02-03 17:52:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-03 17:52:07] 
[2026-02-03 17:52:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-03 17:52:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-03 17:52:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-03 17:52:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-03 17:52:07] 
[2026-02-03 17:52:07] 2026-02-03 22:51:15,569 | INFO     | **************************************
[2026-02-03 17:52:07] 2026-02-03 22:51:16,075 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2026-02-03 17:52:07] 2026-02-03 22:51:16,218 | INFO     | sufficient remaining disk space (122901495808 B)
[2026-02-03 17:52:07] 2026-02-03 22:51:16,218 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-03 17:52:07] 2026-02-03 22:51:16,218 | INFO     | current server update state: UPDATING_FINAL
[2026-02-03 17:52:07] 2026-02-03 22:51:16,218 | INFO     | update_server=False
[2026-02-03 17:52:07] 2026-02-03 22:51:16,218 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-03 17:52:07] 2026-02-03 22:51:16,219 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-03 17:52:07] 2026-02-03 22:51:16,219 | INFO     | aborting loop
[2026-02-03 17:52:07] 2026-02-03 22:51:16,219 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-03 17:52:07] 2026-02-03 22:51:17,224 | INFO     | [job] retrieve thread has finished
[2026-02-03 17:52:07] 2026-02-03 22:51:17,228 | INFO     | [job] job monitor thread has finished
[2026-02-03 17:52:07] 2026-02-03 22:51:17,256 | INFO     | all data control threads have been joined
[2026-02-03 17:52:07] 2026-02-03 22:51:17,330 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-03 17:52:07] 2026-02-03 22:51:17,354 | INFO     | all payload control threads have been joined
[2026-02-03 17:52:07] 2026-02-03 22:51:17,384 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-03 17:52:07] 2026-02-03 22:51:17,622 | INFO     | [data] copytool_in thread has finished
[2026-02-03 17:52:07] 2026-02-03 22:51:17,695 | INFO     | [payload] validate_pre thread has finished
[2026-02-03 17:52:07] 2026-02-03 22:51:17,706 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-03 17:52:07] 2026-02-03 22:51:17,804 | INFO     | [payload] validate_post thread has finished
[2026-02-03 17:52:07] 2026-02-03 22:51:17,876 | INFO     | all job control threads have been joined
[2026-02-03 17:52:07] 2026-02-03 22:51:17,941 | INFO     | [job] create_data_payload thread has finished
[2026-02-03 17:52:07] 2026-02-03 22:51:18,146 | INFO     | [job] validate thread has finished
[2026-02-03 17:52:07] 2026-02-03 22:51:18,263 | INFO     | [data] control thread has finished
[2026-02-03 17:52:07] 2026-02-03 22:51:18,305 | INFO     | [payload] failed_post thread has finished
[2026-02-03 17:52:07] 2026-02-03 22:51:18,348 | INFO     | [payload] execute_payloads thread has finished
[2026-02-03 17:52:07] 2026-02-03 22:51:18,360 | INFO     | [payload] control thread has finished
[2026-02-03 17:52:07] 2026-02-03 22:51:18,390 | INFO     | [job] queue monitor thread has finished
[2026-02-03 17:52:07] 2026-02-03 22:51:18,882 | INFO     | [job] control thread has finished
[2026-02-03 17:52:07] 2026-02-03 22:51:19,724 | INFO     | [data] copytool_out thread has finished
[2026-02-03 17:52:07] 2026-02-03 22:51:20,227 | INFO     | [data] queue_monitor thread has finished
[2026-02-03 17:52:07] 2026-02-03 22:51:45,715 | INFO     | PID=569968 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-03 17:52:07] 2026-02-03 22:51:45,716 | INFO     | .. there are 23 such processes running
[2026-02-03 17:52:07] 2026-02-03 22:51:45,720 | INFO     | found 0 job(s) in 20 queues
[2026-02-03 17:52:07] 2026-02-03 22:51:45,720 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-03 17:52:07] 2026-02-03 22:51:45,721 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-03 17:52:07] 2026-02-03 22:51:59,492 | INFO     | [monitor] cgroup control has ended
[2026-02-03 17:52:07] 2026-02-03 22:52:01,245 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140582170036032)>', '<ExcThread(monitor, started 140581829326592)>']
[2026-02-03 17:52:07] 2026-02-03 22:52:01,833 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-03 17:52:07] 2026-02-03 22:52:01,834 | INFO     | [monitor] control thread has ended
[2026-02-03 17:52:07] 2026-02-03 22:52:06,279 | INFO     | all workflow threads have been joined
[2026-02-03 17:52:07] 2026-02-03 22:52:06,284 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-03 17:52:07] 2026-02-03 22:52:06,293 | INFO     | traces error code: 0
[2026-02-03 17:52:07] 2026-02-03 22:52:06,294 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-03 17:52:07] 2026-02-03 22:52:06,564 [wrapper] ==== pilot stdout END ====
[2026-02-03 17:52:07] 2026-02-03 22:52:06,568 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-03 17:52:07] 2026-02-03 22:52:06,571 [wrapper] pilotpid: 569968
[2026-02-03 17:52:07] 2026-02-03 22:52:06,574 [wrapper] Pilot exit status: 0
[2026-02-03 17:52:07] 2026-02-03 22:52:06,603 [wrapper] pandaids: 6994862163 6994862163
[2026-02-03 17:52:07] 2026-02-03 22:52:06,793 [wrapper] cleanup supervisor_pilot 1448504 569970
[2026-02-03 17:52:07] 2026-02-03 22:52:06,860 [wrapper] Test setup, not cleaning
[2026-02-03 17:52:07] 2026-02-03 22:52:06,923 [wrapper] apfmon messages muted
[2026-02-03 17:52:07] 2026-02-03 22:52:06,943 [wrapper] ==== wrapper stdout END ====
[2026-02-03 17:52:07] 2026-02-03 22:52:06,968 [wrapper] ==== wrapper stderr END ====
[2026-02-03 17:52:07]  *** Error codes and diagnostics ***
[2026-02-03 17:52:07]     "exeErrorCode": 0,
[2026-02-03 17:52:07]     "exeErrorDiag": "",
[2026-02-03 17:52:07]     "pilotErrorCode": 0,
[2026-02-03 17:52:07]     "pilotErrorDiag": "",
[2026-02-03 17:52:07]  *** Listing of results directory ***
[2026-02-03 17:52:07] total 1155892
[2026-02-03 17:52:07] drwx------. 5 boincer umatlas      4096 Jan 14 05:00 pilot3
[2026-02-03 17:52:07] -rw-r--r--. 1 boincer umatlas    584422 Jan 31 13:13 pilot3.tar.gz
[2026-02-03 17:52:07] -rwx------. 1 boincer umatlas     36322 Jan 31 13:17 runpilot2-wrapper.sh
[2026-02-03 17:52:07] -rw-r--r--. 1 boincer umatlas      5111 Jan 31 13:21 queuedata.json
[2026-02-03 17:52:07] -rw-r--r--. 1 boincer umatlas       100 Feb  3 11:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-03 17:52:07] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  3 11:32 run_atlas
[2026-02-03 17:52:07] -rw-r--r--. 1 boincer umatlas       105 Feb  3 11:32 job.xml
[2026-02-03 17:52:07] -rw-r--r--. 3 boincer umatlas 496815112 Feb  3 11:32 EVNT.48317929._000167.pool.root.1
[2026-02-03 17:52:07] -rw-r--r--. 3 boincer umatlas 496815112 Feb  3 11:32 ATLAS.root_0
[2026-02-03 17:52:07] -rw-r--r--. 2 boincer umatlas     15845 Feb  3 11:32 start_atlas.sh
[2026-02-03 17:52:07] drwxrwx--x. 2 boincer umatlas      4096 Feb  3 11:32 shared
[2026-02-03 17:52:07] -rw-r--r--. 2 boincer umatlas    597757 Feb  3 11:32 input.tar.gz
[2026-02-03 17:52:07] -rw-r--r--. 1 boincer umatlas         0 Feb  3 11:32 boinc_lockfile
[2026-02-03 17:52:07] -rw-r--r--. 1 boincer umatlas      2510 Feb  3 13:30 pandaJob.out
[2026-02-03 17:52:07] -rw-------. 1 boincer umatlas        57 Feb  3 13:30 setup.sh.local
[2026-02-03 17:52:07] -rw-------. 1 boincer umatlas   1009252 Feb  3 13:30 agis_schedconf.cvmfs.json
[2026-02-03 17:52:07] -rw-------. 1 boincer umatlas       429 Feb  3 13:30 workernode_map.json
[2026-02-03 17:52:07] -rw-r--r--. 1 boincer umatlas      6958 Feb  3 17:49 init_data.xml
[2026-02-03 17:52:07] -rw-------. 1 boincer umatlas 181134143 Feb  3 17:50 HITS.48317931._009338.pool.root.1
[2026-02-03 17:52:07] -rw-r--r--. 1 boincer umatlas       531 Feb  3 17:50 boinc_task_state.xml
[2026-02-03 17:52:07] -rw-------. 1 boincer umatlas      1060 Feb  3 17:51 memory_monitor_summary.json
[2026-02-03 17:52:07] -rw-------. 1 boincer umatlas   1511668 Feb  3 17:51 agis_ddmendpoints.agis.ALL.json
[2026-02-03 17:52:07] -rw-------. 1 boincer umatlas    480441 Feb  3 17:51 log.48317931._009338.job.log.tgz.1
[2026-02-03 17:52:07] -rw-------. 1 boincer umatlas      6347 Feb  3 17:51 heartbeat.json
[2026-02-03 17:52:07] -rw-------. 1 boincer umatlas        96 Feb  3 17:51 pilot_heartbeat.json
[2026-02-03 17:52:07] -rw-r--r--. 1 boincer umatlas        28 Feb  3 17:52 wrapper_checkpoint.txt
[2026-02-03 17:52:07] -rw-------. 1 boincer umatlas      4820 Feb  3 17:52 pilotlog.txt
[2026-02-03 17:52:07] -rw-------. 1 boincer umatlas   1975066 Feb  3 17:52 log.48317931._009338.job.log.1
[2026-02-03 17:52:07] -rw-------. 1 boincer umatlas       357 Feb  3 17:52 output.list
[2026-02-03 17:52:07] -rw-r--r--. 1 boincer umatlas       620 Feb  3 17:52 runtime_log
[2026-02-03 17:52:07] -rw-------. 1 boincer umatlas   2478080 Feb  3 17:52 result.tar.gz
[2026-02-03 17:52:07] -rw-r--r--. 1 boincer umatlas      9427 Feb  3 17:52 runtime_log.err
[2026-02-03 17:52:07] -rw-------. 1 boincer umatlas       784 Feb  3 17:52 OLqMDmNiU68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmOZOKDmyYAiqn.diag
[2026-02-03 17:52:07] -rw-r--r--. 1 boincer umatlas      8192 Feb  3 17:52 boinc_mmap_file
[2026-02-03 17:52:07] -rw-r--r--. 1 boincer umatlas     23609 Feb  3 17:52 stderr.txt
[2026-02-03 17:52:07] HITS file was successfully produced:
[2026-02-03 17:52:07] -rw-------. 1 boincer umatlas 181134143 Feb  3 17:50 shared/HITS.pool.root.1
[2026-02-03 17:52:07]  *** Contents of shared directory: ***
[2026-02-03 17:52:07] total 665092
[2026-02-03 17:52:07] -rw-r--r--. 3 boincer umatlas 496815112 Feb  3 11:32 ATLAS.root_0
[2026-02-03 17:52:07] -rw-r--r--. 2 boincer umatlas     15845 Feb  3 11:32 start_atlas.sh
[2026-02-03 17:52:07] -rw-r--r--. 2 boincer umatlas    597757 Feb  3 11:32 input.tar.gz
[2026-02-03 17:52:07] -rw-------. 1 boincer umatlas 181134143 Feb  3 17:50 HITS.pool.root.1
[2026-02-03 17:52:07] -rw-------. 1 boincer umatlas   2478080 Feb  3 17:52 result.tar.gz
17:52:29 (551284): run_atlas exited; CPU time 32144.819018
17:52:29 (551284): called boinc_finish(0)

</stderr_txt>
]]>

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