Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:44:22 (3051138): wrapper (7.7.26015): starting
05:44:22 (3051138): wrapper: running run_atlas (--nthreads 3)
[2026-02-04 05:44:22] Arguments: --nthreads 3
[2026-02-04 05:44:22] Threads: 3
[2026-02-04 05:44:22] Checking for CVMFS
[2026-02-04 05:44:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-04 05:44:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-04 05:44:23] Running cvmfs_config stat atlas.cern.ch
[2026-02-04 05:44:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-04 05:44:23] 2.9.2.0 443122 9394 86080 155855 1 50 26873273 36864001 0 130560 0 4048911 99.984 322425 7283 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-04 05:44:23] CVMFS is ok
[2026-02-04 05:44:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-04 05:44:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-04 05:44:23] Further information can be found at the LHC@home message board.
[2026-02-04 05:44:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 05:44:23] Checking for apptainer binary...
[2026-02-04 05:44:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-04 05:44:23] Running /usr/bin/apptainer --version
[2026-02-04 05:44:23] apptainer version 1.4.1-1.1
[2026-02-04 05:44:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 05:44:23] legendA163
[2026-02-04 05:44:23] apptainer works
[2026-02-04 05:44:23] Set ATHENA_PROC_NUMBER=3
[2026-02-04 05:44:23] Set ATHENA_CORE_NUMBER=3
[2026-02-04 05:44:23] Starting ATLAS job with PandaID=6997218745
[2026-02-04 05:44:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 07:10:03]  *** The last 200 lines of the pilot log: ***
[2026-02-04 07:10:03]  is_altstaged=None
[2026-02-04 07:10:03]  is_tar=False
[2026-02-04 07:10:03]  lfn=log.48317931._015314.job.log.tgz.1
[2026-02-04 07:10:03]  mtime=0
[2026-02-04 07:10:03]  protocol_id=None
[2026-02-04 07:10:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-04 07:10:03]  replicas=None
[2026-02-04 07:10:03]  scope=mc23_13p6TeV
[2026-02-04 07:10:03]  status=None
[2026-02-04 07:10:03]  status_code=0
[2026-02-04 07:10:03]  storage_token=
[2026-02-04 07:10:03]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6997218745/log.48317931._015314.job.log.tgz.1
[2026-02-04 07:10:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ed/a7/log.48317931._015314.job.log.tgz.1
[2026-02-04 07:10:03]  workdir=None
[2026-02-04 07:10:03] ]
[2026-02-04 07:10:03] 2026-02-04 06:09:26,683 | INFO     | transferring file log.48317931._015314.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6997218745/log.48317931._015314.job.log.tgz.1 to /local/data/boinc/
[2026-02-04 07:10:03] 2026-02-04 06:09:26,683 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6997218745/log.48317931._015314.job.log.tgz.1 /local/data/boinc/slots/0/log.48317931._0153
[2026-02-04 07:10:03] 2026-02-04 06:09:26,696 | INFO     | adding to output.list: log.48317931._015314.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ed/a7/log.48317931._015314.job.log.tg
[2026-02-04 07:10:03] 2026-02-04 06:09:26,697 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-04 07:10:03] 2026-02-04 06:09:26,697 | INFO     | summary of transferred files:
[2026-02-04 07:10:03] 2026-02-04 06:09:26,697 | INFO     |  -- lfn=log.48317931._015314.job.log.tgz.1, status_code=0, status=transferred
[2026-02-04 07:10:03] 2026-02-04 06:09:26,697 | INFO     | stage-out finished correctly
[2026-02-04 07:10:03] 2026-02-04 06:09:27,874 | INFO     | monitor loop #393: job 0:6997218745 is in state 'finished'
[2026-02-04 07:10:03] 2026-02-04 06:09:27,874 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-04 07:10:03] 2026-02-04 06:09:28,216 | INFO     | time since job start (5094s) is within the limit (349056.0s)
[2026-02-04 07:10:03] 2026-02-04 06:09:28,823 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-04 07:10:03] 2026-02-04 06:09:30,222 | INFO     | time since job start (5096s) is within the limit (349056.0s)
[2026-02-04 07:10:03] 2026-02-04 06:09:30,378 | INFO     | monitor loop #394: job 0:6997218745 is in state 'finished'
[2026-02-04 07:10:03] 2026-02-04 06:09:30,378 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-04 07:10:03] 2026-02-04 06:09:30,801 | INFO     | job 6997218745 has state=finished
[2026-02-04 07:10:03] 2026-02-04 06:09:30,801 | INFO     | preparing for final server update for job 6997218745 in state='finished'
[2026-02-04 07:10:03] 2026-02-04 06:09:30,802 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-6997218745/jobReport.json
[2026-02-04 07:10:03] 2026-02-04 06:09:30,803 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-02-04 07:10:03] 2026-02-04 06:09:30,803 | INFO     | this job has now completed (state=finished)
[2026-02-04 07:10:03] 2026-02-04 06:09:30,803 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-04 07:10:03] 2026-02-04 06:09:30,803 | INFO     | log transfer has been attempted: DONE
[2026-02-04 07:10:03] 2026-02-04 06:09:30,803 | INFO     | job 6997218745 has finished - writing final server update
[2026-02-04 07:10:03] 2026-02-04 06:09:30,803 | INFO     | total number of processed events: 400 (read)
[2026-02-04 07:10:03] 2026-02-04 06:09:30,805 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6997218745/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 07:10:03] 2026-02-04 06:09:30,805 | INFO     | extracted standard info from prmon json
[2026-02-04 07:10:03] 2026-02-04 06:09:30,805 | INFO     | extracted standard memory fields from prmon json
[2026-02-04 07:10:03] 2026-02-04 06:09:30,805 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-04 07:10:03] 2026-02-04 06:09:30,805 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-04 07:10:03] 2026-02-04 06:09:30,805 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-04 07:10:03] 2026-02-04 06:09:30,806 | INFO     | fitting pss+swap vs Time
[2026-02-04 07:10:03] 2026-02-04 06:09:30,806 | INFO     | sum of square deviations: 141539398.0
[2026-02-04 07:10:03] 2026-02-04 06:09:30,806 | INFO     | sum of deviations: -13221098154.000002
[2026-02-04 07:10:03] 2026-02-04 06:09:30,806 | INFO     | mean x: 1770182914.0
[2026-02-04 07:10:03] 2026-02-04 06:09:30,806 | INFO     | mean y: 2440389.7922077924
[2026-02-04 07:10:03] 2026-02-04 06:09:30,807 | INFO     | intersect: 165354013077.19153
[2026-02-04 07:10:03] 2026-02-04 06:09:30,807 | INFO     | chi2: 0.18267228770715468
[2026-02-04 07:10:03] 2026-02-04 06:09:30,807 | INFO     | current memory leak: -93.41 B/s (using 77 data points, chi2=0.18)
[2026-02-04 07:10:03] 2026-02-04 06:09:30,807 | INFO     | could have reported an average CPU frequency of 3747 MHz (6 samples)
[2026-02-04 07:10:03] 2026-02-04 06:09:30,807 | INFO     | ..............................
[2026-02-04 07:10:03] 2026-02-04 06:09:30,807 | INFO     | . Timing measurements:
[2026-02-04 07:10:03] 2026-02-04 06:09:30,807 | INFO     | . get job = 0 s
[2026-02-04 07:10:03] 2026-02-04 06:09:30,807 | INFO     | . initial setup = 3 s
[2026-02-04 07:10:03] 2026-02-04 06:09:30,807 | INFO     | . payload setup = 3 s
[2026-02-04 07:10:03] 2026-02-04 06:09:30,807 | INFO     | . stage-in = 0 s
[2026-02-04 07:10:03] 2026-02-04 06:09:30,807 | INFO     | . payload execution = 5075 s
[2026-02-04 07:10:03] 2026-02-04 06:09:30,807 | INFO     | . stage-out = 0 s
[2026-02-04 07:10:03] 2026-02-04 06:09:30,807 | INFO     | . log creation = 0 s
[2026-02-04 07:10:03] 2026-02-04 06:09:30,807 | INFO     | ..............................
[2026-02-04 07:10:03] 2026-02-04 06:09:30,845 | INFO     | 
[2026-02-04 07:10:03] 2026-02-04 06:09:30,845 | INFO     | job summary report
[2026-02-04 07:10:03] 2026-02-04 06:09:30,845 | INFO     | --------------------------------------------------
[2026-02-04 07:10:03] 2026-02-04 06:09:30,845 | INFO     | PanDA job id: 6997218745
[2026-02-04 07:10:03] 2026-02-04 06:09:30,845 | INFO     | task id: 48317931
[2026-02-04 07:10:03] 2026-02-04 06:09:30,845 | INFO     | errors: (none)
[2026-02-04 07:10:03] 2026-02-04 06:09:30,845 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 07:10:03] 2026-02-04 06:09:30,845 | INFO     | pilot state: finished 
[2026-02-04 07:10:03] 2026-02-04 06:09:30,845 | INFO     | transexitcode: 0
[2026-02-04 07:10:03] 2026-02-04 06:09:30,845 | INFO     | exeerrorcode: 0
[2026-02-04 07:10:03] 2026-02-04 06:09:30,845 | INFO     | exeerrordiag: 
[2026-02-04 07:10:03] 2026-02-04 06:09:30,845 | INFO     | exitcode: 0
[2026-02-04 07:10:03] 2026-02-04 06:09:30,845 | INFO     | exitmsg: OK
[2026-02-04 07:10:03] 2026-02-04 06:09:30,845 | INFO     | cpuconsumptiontime: 14569 s
[2026-02-04 07:10:03] 2026-02-04 06:09:30,845 | INFO     | nevents: 400
[2026-02-04 07:10:03] 2026-02-04 06:09:30,845 | INFO     | neventsw: 0
[2026-02-04 07:10:03] 2026-02-04 06:09:30,845 | INFO     | pid: 3059720
[2026-02-04 07:10:03] 2026-02-04 06:09:30,845 | INFO     | pgrp: 3059720
[2026-02-04 07:10:03] 2026-02-04 06:09:30,845 | INFO     | corecount: 3
[2026-02-04 07:10:03] 2026-02-04 06:09:30,845 | INFO     | event service: False
[2026-02-04 07:10:03] 2026-02-04 06:09:30,846 | INFO     | sizes: {0: 2278218, 11: 2278218, 5082: 2313681, 5084: 2313681, 5086: 2313875}
[2026-02-04 07:10:03] 2026-02-04 06:09:30,846 | INFO     | --------------------------------------------------
[2026-02-04 07:10:03] 2026-02-04 06:09:30,846 | INFO     | 
[2026-02-04 07:10:03] 2026-02-04 06:09:30,846 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-02-04 07:10:03] 2026-02-04 06:09:30,858 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 07:10:03] 2026-02-04 06:09:30,858 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 07:10:03] 2026-02-04 06:09:30,858 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 07:10:03] 2026-02-04 06:09:30,858 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 07:10:03] 2026-02-04 06:09:30,858 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 07:10:03] 2026-02-04 06:09:30,858 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 07:10:03] 2026-02-04 06:09:30,858 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 07:10:03] 2026-02-04 06:09:30,858 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 07:10:03] 2026-02-04 06:09:30,858 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 07:10:03] 2026-02-04 06:09:30,859 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 07:10:03] 2026-02-04 06:09:30,859 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 07:10:03] 2026-02-04 06:09:30,859 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 07:10:03] 2026-02-04 06:09:30,859 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 07:10:03] 2026-02-04 06:09:30,859 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 07:10:03] 2026-02-04 06:09:30,859 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 07:10:03] 2026-02-04 06:09:30,859 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 07:10:03] 2026-02-04 06:09:30,859 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 07:10:03] 2026-02-04 06:09:30,859 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 07:10:03] 2026-02-04 06:09:30,859 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 07:10:03] 2026-02-04 06:09:30,859 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 07:10:03] 2026-02-04 06:09:30,859 | INFO     | job 6997218745 has completed (purged errors)
[2026-02-04 07:10:03] 2026-02-04 06:09:30,859 | INFO     | overall cleanup function is called
[2026-02-04 07:10:03] 2026-02-04 06:09:31,866 | INFO     | --- collectZombieJob: --- 10, [3059720]
[2026-02-04 07:10:03] 2026-02-04 06:09:31,866 | INFO     | zombie collector waiting for pid 3059720
[2026-02-04 07:10:03] 2026-02-04 06:09:31,866 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 07:10:03] 2026-02-04 06:09:31,866 | INFO     | collected zombie processes
[2026-02-04 07:10:03] 2026-02-04 06:09:31,866 | INFO     | will attempt to kill all subprocesses of pid=3059720
[2026-02-04 07:10:03] 2026-02-04 06:09:31,921 | INFO     | process IDs to be killed: [3059720] (in reverse order)
[2026-02-04 07:10:03] 2026-02-04 06:09:31,950 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 07:10:03] 2026-02-04 06:09:31,950 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 07:10:03] 2026-02-04 06:09:31,952 | INFO     | did not find any defunct processes belonging to 3059720
[2026-02-04 07:10:03] 2026-02-04 06:09:31,953 | INFO     | did not find any defunct processes belonging to 3059720
[2026-02-04 07:10:03] 2026-02-04 06:09:31,953 | INFO     | ready for new job
[2026-02-04 07:10:03] 2026-02-04 06:09:31,953 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 07:10:03] 2026-02-04 06:09:31,954 | INFO     | **************************************
[2026-02-04 07:10:03] 2026-02-04 06:09:31,954 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 07:10:03] 2026-02-04 06:09:31,954 | INFO     | **************************************
[2026-02-04 07:10:03] 2026-02-04 06:09:31,954 | INFO     | 
[2026-02-04 07:10:03] 2026-02-04 06:09:31,955 | INFO     | architecture information:
[2026-02-04 07:10:03] 2026-02-04 06:09:31,955 | INFO     | executing command: cat /etc/os-release
[2026-02-04 07:10:03] 2026-02-04 06:09:31,964 | INFO     | cat /etc/os-release:
[2026-02-04 07:10:03] NAME="CentOS Linux"
[2026-02-04 07:10:03] VERSION="7 (Core)"
[2026-02-04 07:10:03] ID="centos"
[2026-02-04 07:10:03] ID_LIKE="rhel fedora"
[2026-02-04 07:10:03] VERSION_ID="7"
[2026-02-04 07:10:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 07:10:03] ANSI_COLOR="0;31"
[2026-02-04 07:10:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 07:10:03] HOME_URL="https://www.centos.org/"
[2026-02-04 07:10:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 07:10:03] 
[2026-02-04 07:10:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 07:10:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 07:10:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 07:10:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 07:10:03] 
[2026-02-04 07:10:03] 2026-02-04 06:09:31,964 | INFO     | **************************************
[2026-02-04 07:10:03] 2026-02-04 06:09:32,467 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-04 07:10:03] 2026-02-04 06:09:32,481 | INFO     | sufficient remaining disk space (374898425856 B)
[2026-02-04 07:10:03] 2026-02-04 06:09:32,481 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 07:10:03] 2026-02-04 06:09:32,481 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 07:10:03] 2026-02-04 06:09:32,481 | INFO     | update_server=False
[2026-02-04 07:10:03] 2026-02-04 06:09:32,481 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 07:10:03] 2026-02-04 06:09:32,481 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 07:10:03] 2026-02-04 06:09:32,482 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 07:10:03] 2026-02-04 06:09:32,610 | INFO     | all data control threads have been joined
[2026-02-04 07:10:03] 2026-02-04 06:09:32,882 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-04 07:10:03] 2026-02-04 06:09:32,882 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-04 07:10:03] 2026-02-04 06:09:32,882 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 07:10:03] 2026-02-04 06:09:32,882 | INFO     | will abort loop
[2026-02-04 07:10:03] 2026-02-04 06:09:33,487 | INFO     | [job] queue monitor thread has finished
[2026-02-04 07:10:03] 2026-02-04 06:09:33,487 | INFO     | [job] retrieve thread has finished
[2026-02-04 07:10:03] 2026-02-04 06:09:33,499 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 07:10:03] 2026-02-04 06:09:33,567 | INFO     | all payload control threads have been joined
[2026-02-04 07:10:03] 2026-02-04 06:09:33,615 | INFO     | all job control threads have been joined
[2026-02-04 07:10:03] 2026-02-04 06:09:33,616 | INFO     | [data] control thread has finished
[2026-02-04 07:10:03] 2026-02-04 06:09:33,669 | INFO     | [data] copytool_in thread has finished
[2026-02-04 07:10:03] 2026-02-04 06:09:33,837 | INFO     | [payload] validate_post thread has finished
[2026-02-04 07:10:03] 2026-02-04 06:09:33,888 | INFO     | [job] job monitor thread has finished
[2026-02-04 07:10:03] 2026-02-04 06:09:33,998 | INFO     | [payload] failed_post thread has finished
[2026-02-04 07:10:03] 2026-02-04 06:09:34,488 | INFO     | [data] copytool_out thread has finished
[2026-02-04 07:10:03] 2026-02-04 06:09:34,573 | INFO     | [payload] control thread has finished
[2026-02-04 07:10:03] 2026-02-04 06:09:34,621 | INFO     | [job] control thread has finished
[2026-02-04 07:10:03] 2026-02-04 06:09:34,862 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 07:10:03] 2026-02-04 06:09:34,914 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 07:10:03] 2026-02-04 06:09:34,915 | INFO     | [job] validate thread has finished
[2026-02-04 07:10:03] 2026-02-04 06:09:34,975 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 07:10:03] 2026-02-04 06:09:38,868 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 07:10:03] 2026-02-04 06:09:39,571 | INFO     | [monitor] cgroup control has ended
[2026-02-04 07:10:03] 2026-02-04 06:09:42,562 | INFO     | job.realtimelogging is not enabled
[2026-02-04 07:10:03] 2026-02-04 06:09:43,568 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 07:10:03] 2026-02-04 06:09:44,494 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140422992348992)>', '<ExcThread(monitor, started 140422647101184)>']
[2026-02-04 07:10:03] 2026-02-04 06:09:49,511 | INFO     | all workflow threads have been joined
[2026-02-04 07:10:03] 2026-02-04 06:09:49,511 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 07:10:03] 2026-02-04 06:09:49,512 | INFO     | traces error code: 0
[2026-02-04 07:10:03] 2026-02-04 06:09:49,512 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 07:10:03] 2026-02-04 06:10:03,344 | INFO     | PID=3055212 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-04 07:10:03] 2026-02-04 06:10:03,344 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 07:10:03] 2026-02-04 06:10:03,345 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 07:10:03] 2026-02-04 06:10:03,345 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 07:10:03] 2026-02-04 06:10:03,345 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 07:10:03] 2026-02-04 06:10:03,345 | INFO     | [monitor] control thread has ended
[2026-02-04 07:10:03] 2026-02-04 06:10:03,393 [wrapper] ==== pilot stdout END ====
[2026-02-04 07:10:03] 2026-02-04 06:10:03,395 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 07:10:03] 2026-02-04 06:10:03,398 [wrapper] pilotpid: 3055212
[2026-02-04 07:10:03] 2026-02-04 06:10:03,400 [wrapper] Pilot exit status: 0
[2026-02-04 07:10:03] 2026-02-04 06:10:03,408 [wrapper] pandaids: 6997218745
[2026-02-04 07:10:03] 2026-02-04 06:10:03,427 [wrapper] cleanup supervisor_pilot 3085023 3055213
[2026-02-04 07:10:03] 2026-02-04 06:10:03,430 [wrapper] Test setup, not cleaning
[2026-02-04 07:10:03] 2026-02-04 06:10:03,432 [wrapper] apfmon messages muted
[2026-02-04 07:10:03] 2026-02-04 06:10:03,435 [wrapper] ==== wrapper stdout END ====
[2026-02-04 07:10:03] 2026-02-04 06:10:03,437 [wrapper] ==== wrapper stderr END ====
[2026-02-04 07:10:03]  *** Error codes and diagnostics ***
[2026-02-04 07:10:03]     "exeErrorCode": 0,
[2026-02-04 07:10:03]     "exeErrorDiag": "",
[2026-02-04 07:10:03]     "pilotErrorCode": 0,
[2026-02-04 07:10:03]     "pilotErrorDiag": "",
[2026-02-04 07:10:03]  *** Listing of results directory ***
[2026-02-04 07:10:03] total 663256
[2026-02-04 07:10:03] -rw-r--r-- 1 boinc boinc      5111 Feb  2 18:56 queuedata.json
[2026-02-04 07:10:03] -rw-r--r-- 1 boinc boinc    584422 Feb  2 18:56 pilot3.tar.gz
[2026-02-04 07:10:03] -rwx------ 1 boinc boinc     36322 Feb  2 18:57 runpilot2-wrapper.sh
[2026-02-04 07:10:03] -rw-r--r-- 1 boinc boinc       100 Feb  4 05:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 07:10:03] -rwxr-xr-x 1 boinc boinc      7986 Feb  4 05:44 run_atlas
[2026-02-04 07:10:03] -rw-r--r-- 1 boinc boinc       105 Feb  4 05:44 job.xml
[2026-02-04 07:10:03] -rw-r--r-- 2 boinc boinc 492205073 Feb  4 05:44 EVNT.48317929._000280.pool.root.1
[2026-02-04 07:10:03] -rw-r--r-- 2 boinc boinc    597755 Feb  4 05:44 input.tar.gz
[2026-02-04 07:10:03] -rw-r--r-- 2 boinc boinc     15845 Feb  4 05:44 start_atlas.sh
[2026-02-04 07:10:03] drwxrwx--x 2 boinc boinc      4096 Feb  4 05:44 shared
[2026-02-04 07:10:03] -rw-r--r-- 1 boinc boinc         0 Feb  4 05:44 boinc_setup_complete
[2026-02-04 07:10:03] -rw-r--r-- 1 boinc boinc      6449 Feb  4 05:44 init_data.xml
[2026-02-04 07:10:03] -rw-r--r-- 1 boinc boinc         0 Feb  4 05:44 boinc_lockfile
[2026-02-04 07:10:03] -rw-r--r-- 1 boinc boinc      2513 Feb  4 05:44 pandaJob.out
[2026-02-04 07:10:03] -rw------- 1 boinc boinc   1009236 Feb  4 05:44 agis_schedconf.cvmfs.json
[2026-02-04 07:10:03] -rw------- 1 boinc boinc   1511668 Feb  4 05:44 agis_ddmendpoints.agis.ALL.json
[2026-02-04 07:10:03] -rw------- 1 boinc boinc       426 Feb  4 05:44 workernode_map.json
[2026-02-04 07:10:03] drwx------ 5 boinc boinc      4096 Feb  4 05:44 pilot3
[2026-02-04 07:10:03] -rw------- 1 boinc boinc 181000215 Feb  4 07:09 HITS.48317931._015314.pool.root.1
[2026-02-04 07:10:03] -rw-r--r-- 1 boinc boinc       530 Feb  4 07:09 boinc_task_state.xml
[2026-02-04 07:10:03] -rw------- 1 boinc boinc      1028 Feb  4 07:09 memory_monitor_summary.json
[2026-02-04 07:10:03] -rw------- 1 boinc boinc    269452 Feb  4 07:09 log.48317931._015314.job.log.tgz.1
[2026-02-04 07:10:03] -rw------- 1 boinc boinc      6314 Feb  4 07:09 heartbeat.json
[2026-02-04 07:10:03] -rw-r--r-- 1 boinc boinc        27 Feb  4 07:09 wrapper_checkpoint.txt
[2026-02-04 07:10:03] -rw-r--r-- 1 boinc boinc      8192 Feb  4 07:09 boinc_mmap_file
[2026-02-04 07:10:03] -rw------- 1 boinc boinc       747 Feb  4 07:10 pilotlog.txt
[2026-02-04 07:10:03] -rw------- 1 boinc boinc        95 Feb  4 07:10 pilot_heartbeat.json
[2026-02-04 07:10:03] -rw------- 1 boinc boinc    744659 Feb  4 07:10 log.48317931._015314.job.log.1
[2026-02-04 07:10:03] -rw------- 1 boinc boinc       357 Feb  4 07:10 output.list
[2026-02-04 07:10:03] -rw-r--r-- 1 boinc boinc       620 Feb  4 07:10 runtime_log
[2026-02-04 07:10:03] -rw------- 1 boinc boinc   1034240 Feb  4 07:10 result.tar.gz
[2026-02-04 07:10:03] -rw-r--r-- 1 boinc boinc      8916 Feb  4 07:10 runtime_log.err
[2026-02-04 07:10:03] -rw------- 1 boinc boinc       661 Feb  4 07:10 1BgLDmhLD78nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmGETKDmm2n6To.diag
[2026-02-04 07:10:03] -rw-r--r-- 1 boinc boinc     21463 Feb  4 07:10 stderr.txt
[2026-02-04 07:10:03] HITS file was successfully produced:
[2026-02-04 07:10:03] -rw------- 1 boinc boinc 181000215 Feb  4 07:09 shared/HITS.pool.root.1
[2026-02-04 07:10:03]  *** Contents of shared directory: ***
[2026-02-04 07:10:03] total 659052
[2026-02-04 07:10:03] -rw-r--r-- 2 boinc boinc 492205073 Feb  4 05:44 ATLAS.root_0
[2026-02-04 07:10:03] -rw-r--r-- 2 boinc boinc    597755 Feb  4 05:44 input.tar.gz
[2026-02-04 07:10:03] -rw-r--r-- 2 boinc boinc     15845 Feb  4 05:44 start_atlas.sh
[2026-02-04 07:10:03] -rw------- 1 boinc boinc 181000215 Feb  4 07:09 HITS.pool.root.1
[2026-02-04 07:10:03] -rw------- 1 boinc boinc   1034240 Feb  4 07:10 result.tar.gz
07:10:05 (3051138): run_atlas exited; CPU time 14599.351954
07:10:05 (3051138): called boinc_finish(0)

</stderr_txt>
]]>

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