Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
21:37:32 (146683): wrapper (7.7.26015): starting
21:37:32 (146683): wrapper: running run_atlas (--nthreads 8)
[2026-02-06 21:37:32] Arguments: --nthreads 8
[2026-02-06 21:37:32] Threads: 8
[2026-02-06 21:37:32] Checking for CVMFS
[2026-02-06 21:37:32] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-06 21:37:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-06 21:37:34] Running cvmfs_config stat atlas.cern.ch
[2026-02-06 21:37:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-06 21:37:34] 2.13.0.0 3508 1206 48596 155959 0 50 5060928 6144000 0 130560 0 397868 99.980 47797 608 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-02-06 21:37:34] CVMFS is ok
[2026-02-06 21:37:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-06 21:37:34] Small home clusters do not require a local http proxy but it is suggested if
[2026-02-06 21:37:34] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-02-06 21:37:34] Further information can be found at the LHC@home message board.
[2026-02-06 21:37:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-06 21:37:34] Checking for apptainer binary...
[2026-02-06 21:37:34] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-06 21:37:34] Running /usr/bin/apptainer --version
[2026-02-06 21:37:34] apptainer version 1.4.5
[2026-02-06 21:37:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-06 21:37:34] oldie
[2026-02-06 21:37:34] apptainer works
[2026-02-06 21:37:34] Set ATHENA_PROC_NUMBER=8
[2026-02-06 21:37:34] Set ATHENA_CORE_NUMBER=8
[2026-02-06 21:37:34] Starting ATLAS job with PandaID=6994196099
[2026-02-06 21:37:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-06 23:32:27]  *** The last 200 lines of the pilot log: ***
[2026-02-06 23:32:27] 2026-02-06 22:31:54,913 | INFO     | reading metadata from: /var/lib/boinc-client/slots/0/PanDA_Pilot-6994196099/jobReport.json
[2026-02-06 23:32:27] 2026-02-06 22:31:54,916 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/0/workernode_map.json
[2026-02-06 23:32:27] 2026-02-06 22:31:54,916 | INFO     | this job has now completed (state=finished)
[2026-02-06 23:32:27] 2026-02-06 22:31:54,916 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-06 23:32:27] 2026-02-06 22:31:54,917 | INFO     | log transfer has been attempted: DONE
[2026-02-06 23:32:27] 2026-02-06 22:31:54,917 | INFO     | job 6994196099 has finished - writing final server update
[2026-02-06 23:32:27] 2026-02-06 22:31:54,917 | INFO     | total number of processed events: 400 (read)
[2026-02-06 23:32:27] 2026-02-06 22:31:54,919 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6994196099/memory_monitor_summary.json (trf name=prmon)
[2026-02-06 23:32:27] 2026-02-06 22:31:54,920 | INFO     | extracted standard info from prmon json
[2026-02-06 23:32:27] 2026-02-06 22:31:54,921 | INFO     | extracted standard memory fields from prmon json
[2026-02-06 23:32:27] 2026-02-06 22:31:54,921 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-06 23:32:27] 2026-02-06 22:31:54,921 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-06 23:32:27] 2026-02-06 22:31:54,921 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 23:32:27] 2026-02-06 22:31:54,924 | INFO     | fitting pss+swap vs Time
[2026-02-06 23:32:27] 2026-02-06 22:31:54,925 | INFO     | sum of square deviations: 435610028.0
[2026-02-06 23:32:27] 2026-02-06 22:31:54,926 | INFO     | sum of deviations: -15944610141.5
[2026-02-06 23:32:27] 2026-02-06 22:31:54,926 | INFO     | mean x: 1770413668.5
[2026-02-06 23:32:27] 2026-02-06 22:31:54,926 | INFO     | mean y: 2632790.9910714286
[2026-02-06 23:32:27] 2026-02-06 22:31:54,926 | INFO     | intersect: 64804987922.75888
[2026-02-06 23:32:27] 2026-02-06 22:31:54,926 | INFO     | chi2: 1.3590466863576185
[2026-02-06 23:32:27] 2026-02-06 22:31:54,927 | INFO     | sum of square deviations: 379832238.0
[2026-02-06 23:32:27] 2026-02-06 22:31:54,927 | INFO     | sum of deviations: -14554723342.0
[2026-02-06 23:32:27] 2026-02-06 22:31:54,928 | INFO     | mean x: 1770413516.0
[2026-02-06 23:32:27] 2026-02-06 22:31:54,928 | INFO     | mean y: 2636593.570093458
[2026-02-06 23:32:27] 2026-02-06 22:31:54,928 | INFO     | intersect: 67842794295.81729
[2026-02-06 23:32:27] 2026-02-06 22:31:54,928 | INFO     | chi2: 1.3544278215891532
[2026-02-06 23:32:27] 2026-02-06 22:31:54,928 | INFO     | current chi2=1.3544278215891532 (change=0.3398606401700822 %)
[2026-02-06 23:32:27] 2026-02-06 22:31:54,929 | INFO     | right removable region: 106
[2026-02-06 23:32:27] 2026-02-06 22:31:54,929 | INFO     | sum of square deviations: 379832238.0
[2026-02-06 23:32:27] 2026-02-06 22:31:54,930 | INFO     | sum of deviations: -27797895749.0
[2026-02-06 23:32:27] 2026-02-06 22:31:54,930 | INFO     | mean x: 1770413821.0
[2026-02-06 23:32:27] 2026-02-06 22:31:54,930 | INFO     | mean y: 2664279.6261682245
[2026-02-06 23:32:27] 2026-02-06 22:31:54,930 | INFO     | intersect: 129569809732.79001
[2026-02-06 23:32:27] 2026-02-06 22:31:54,930 | INFO     | chi2: 0.1996171607141096
[2026-02-06 23:32:27] 2026-02-06 22:31:54,931 | INFO     | current chi2=0.1996171607141096 (change=85.311971787437 %)
[2026-02-06 23:32:27] 2026-02-06 22:31:54,931 | INFO     | sum of square deviations: 329031285.5
[2026-02-06 23:32:27] 2026-02-06 22:31:54,932 | INFO     | sum of deviations: -23958903113.499996
[2026-02-06 23:32:27] 2026-02-06 22:31:54,932 | INFO     | mean x: 1770413973.5
[2026-02-06 23:32:27] 2026-02-06 22:31:54,932 | INFO     | mean y: 2652723.8333333335
[2026-02-06 23:32:27] 2026-02-06 22:31:54,932 | INFO     | intersect: 128917983062.14868
[2026-02-06 23:32:27] 2026-02-06 22:31:54,932 | INFO     | chi2: 0.19918283629247943
[2026-02-06 23:32:27] 2026-02-06 22:31:54,933 | INFO     | current chi2=0.19918283629247943 (change=0.21757869918418377 %)
[2026-02-06 23:32:27] 2026-02-06 22:31:54,933 | INFO     | left removable region: 20
[2026-02-06 23:32:27] 2026-02-06 22:31:54,933 | INFO     | sum of square deviations: 197203697.5
[2026-02-06 23:32:27] 2026-02-06 22:31:54,933 | INFO     | sum of deviations: -13545531381.5
[2026-02-06 23:32:27] 2026-02-06 22:31:54,934 | INFO     | mean x: 1770414095.5
[2026-02-06 23:32:27] 2026-02-06 22:31:54,934 | INFO     | mean y: 2625155.1511627906
[2026-02-06 23:32:27] 2026-02-06 22:31:54,934 | INFO     | intersect: 121608862730.10936
[2026-02-06 23:32:27] 2026-02-06 22:31:54,934 | INFO     | chi2: 0.17274445145016012
[2026-02-06 23:32:27] 2026-02-06 22:31:54,934 | INFO     | current memory leak: -68.69 B/s (using 86 data points, chi2=0.17)
[2026-02-06 23:32:27] 2026-02-06 22:31:54,935 | INFO     | could have reported an average CPU frequency of 2364 MHz (7 samples)
[2026-02-06 23:32:27] 2026-02-06 22:31:54,935 | INFO     | ..............................
[2026-02-06 23:32:27] 2026-02-06 22:31:54,935 | INFO     | . Timing measurements:
[2026-02-06 23:32:27] 2026-02-06 22:31:54,935 | INFO     | . get job = 0 s
[2026-02-06 23:32:27] 2026-02-06 22:31:54,935 | INFO     | . initial setup = 3 s
[2026-02-06 23:32:27] 2026-02-06 22:31:54,936 | INFO     | . payload setup = 2 s
[2026-02-06 23:32:27] 2026-02-06 22:31:54,936 | INFO     | . stage-in = 0 s
[2026-02-06 23:32:27] 2026-02-06 22:31:54,936 | INFO     | . payload execution = 6824 s
[2026-02-06 23:32:27] 2026-02-06 22:31:54,936 | INFO     | . stage-out = 0 s
[2026-02-06 23:32:27] 2026-02-06 22:31:54,936 | INFO     | . log creation = 0 s
[2026-02-06 23:32:27] 2026-02-06 22:31:54,936 | INFO     | ..............................
[2026-02-06 23:32:27] 2026-02-06 22:31:55,029 | INFO     | 
[2026-02-06 23:32:27] 2026-02-06 22:31:55,029 | INFO     | job summary report
[2026-02-06 23:32:27] 2026-02-06 22:31:55,029 | INFO     | --------------------------------------------------
[2026-02-06 23:32:27] 2026-02-06 22:31:55,029 | INFO     | PanDA job id: 6994196099
[2026-02-06 23:32:27] 2026-02-06 22:31:55,029 | INFO     | task id: 48318042
[2026-02-06 23:32:27] 2026-02-06 22:31:55,029 | INFO     | errors: (none)
[2026-02-06 23:32:27] 2026-02-06 22:31:55,030 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-06 23:32:27] 2026-02-06 22:31:55,030 | INFO     | pilot state: finished 
[2026-02-06 23:32:27] 2026-02-06 22:31:55,030 | INFO     | transexitcode: 0
[2026-02-06 23:32:27] 2026-02-06 22:31:55,030 | INFO     | exeerrorcode: 0
[2026-02-06 23:32:27] 2026-02-06 22:31:55,030 | INFO     | exeerrordiag: 
[2026-02-06 23:32:27] 2026-02-06 22:31:55,030 | INFO     | exitcode: 0
[2026-02-06 23:32:27] 2026-02-06 22:31:55,030 | INFO     | exitmsg: OK
[2026-02-06 23:32:27] 2026-02-06 22:31:55,030 | INFO     | cpuconsumptiontime: 52225 s
[2026-02-06 23:32:27] 2026-02-06 22:31:55,031 | INFO     | nevents: 400
[2026-02-06 23:32:27] 2026-02-06 22:31:55,031 | INFO     | neventsw: 0
[2026-02-06 23:32:27] 2026-02-06 22:31:55,031 | INFO     | pid: 155169
[2026-02-06 23:32:27] 2026-02-06 22:31:55,031 | INFO     | pgrp: 155169
[2026-02-06 23:32:27] 2026-02-06 22:31:55,031 | INFO     | corecount: 8
[2026-02-06 23:32:27] 2026-02-06 22:31:55,031 | INFO     | event service: False
[2026-02-06 23:32:27] 2026-02-06 22:31:55,031 | INFO     | sizes: {0: 2282008, 1: 2283133, 12: 2283133, 6830: 2310326, 6831: 2319393, 6834: 2319393, 6836: 2319715}
[2026-02-06 23:32:27] 2026-02-06 22:31:55,031 | INFO     | --------------------------------------------------
[2026-02-06 23:32:27] 2026-02-06 22:31:55,032 | INFO     | 
[2026-02-06 23:32:27] 2026-02-06 22:31:55,032 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2026-02-06 23:32:27] 2026-02-06 22:31:55,049 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-06 23:32:27] 2026-02-06 22:31:55,049 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-06 23:32:27] 2026-02-06 22:31:55,049 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-06 23:32:27] 2026-02-06 22:31:55,049 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-06 23:32:27] 2026-02-06 22:31:55,049 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-06 23:32:27] 2026-02-06 22:31:55,050 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-06 23:32:27] 2026-02-06 22:31:55,050 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-06 23:32:27] 2026-02-06 22:31:55,050 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-06 23:32:27] 2026-02-06 22:31:55,050 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-06 23:32:27] 2026-02-06 22:31:55,050 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-06 23:32:27] 2026-02-06 22:31:55,050 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-06 23:32:27] 2026-02-06 22:31:55,050 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-06 23:32:27] 2026-02-06 22:31:55,050 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-06 23:32:27] 2026-02-06 22:31:55,050 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-06 23:32:27] 2026-02-06 22:31:55,050 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-06 23:32:27] 2026-02-06 22:31:55,050 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-06 23:32:27] 2026-02-06 22:31:55,050 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-06 23:32:27] 2026-02-06 22:31:55,051 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-06 23:32:27] 2026-02-06 22:31:55,051 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-06 23:32:27] 2026-02-06 22:31:55,051 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-06 23:32:27] 2026-02-06 22:31:55,051 | INFO     | job 6994196099 has completed (purged errors)
[2026-02-06 23:32:27] 2026-02-06 22:31:55,051 | INFO     | overall cleanup function is called
[2026-02-06 23:32:27] 2026-02-06 22:31:55,268 | INFO     | PID=150762 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-06 23:32:27] 2026-02-06 22:31:56,058 | INFO     | --- collectZombieJob: --- 10, [155169]
[2026-02-06 23:32:27] 2026-02-06 22:31:56,058 | INFO     | zombie collector waiting for pid 155169
[2026-02-06 23:32:27] 2026-02-06 22:31:56,058 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-06 23:32:27] 2026-02-06 22:31:56,058 | INFO     | collected zombie processes
[2026-02-06 23:32:27] 2026-02-06 22:31:56,059 | INFO     | will attempt to kill all subprocesses of pid=155169
[2026-02-06 23:32:27] 2026-02-06 22:31:56,168 | INFO     | process IDs to be killed: [155169] (in reverse order)
[2026-02-06 23:32:27] 2026-02-06 22:31:56,200 | WARNING  | found no corresponding commands to process id(s)
[2026-02-06 23:32:27] 2026-02-06 22:31:56,201 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-06 23:32:27] 2026-02-06 22:31:56,203 | INFO     | did not find any defunct processes belonging to 155169
[2026-02-06 23:32:27] 2026-02-06 22:31:56,204 | INFO     | did not find any defunct processes belonging to 155169
[2026-02-06 23:32:27] 2026-02-06 22:31:56,205 | INFO     | ready for new job
[2026-02-06 23:32:27] 2026-02-06 22:31:56,205 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-06 23:32:27] 2026-02-06 22:31:56,205 | INFO     | **************************************
[2026-02-06 23:32:27] 2026-02-06 22:31:56,206 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-06 23:32:27] 2026-02-06 22:31:56,206 | INFO     | **************************************
[2026-02-06 23:32:27] 2026-02-06 22:31:56,206 | INFO     | 
[2026-02-06 23:32:27] 2026-02-06 22:31:56,206 | INFO     | architecture information:
[2026-02-06 23:32:27] 2026-02-06 22:31:56,206 | INFO     | executing command: cat /etc/os-release
[2026-02-06 23:32:27] 2026-02-06 22:31:56,214 | INFO     | cat /etc/os-release:
[2026-02-06 23:32:27] NAME="CentOS Linux"
[2026-02-06 23:32:27] VERSION="7 (Core)"
[2026-02-06 23:32:27] ID="centos"
[2026-02-06 23:32:27] ID_LIKE="rhel fedora"
[2026-02-06 23:32:27] VERSION_ID="7"
[2026-02-06 23:32:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-06 23:32:27] ANSI_COLOR="0;31"
[2026-02-06 23:32:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-06 23:32:27] HOME_URL="https://www.centos.org/"
[2026-02-06 23:32:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-06 23:32:27] 
[2026-02-06 23:32:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-06 23:32:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-06 23:32:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-06 23:32:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-06 23:32:27] 
[2026-02-06 23:32:27] 2026-02-06 22:31:56,214 | INFO     | **************************************
[2026-02-06 23:32:27] 2026-02-06 22:31:56,717 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2026-02-06 23:32:27] 2026-02-06 22:31:56,728 | INFO     | sufficient remaining disk space (195754459136 B)
[2026-02-06 23:32:27] 2026-02-06 22:31:56,728 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-06 23:32:27] 2026-02-06 22:31:56,728 | INFO     | current server update state: UPDATING_FINAL
[2026-02-06 23:32:27] 2026-02-06 22:31:56,729 | INFO     | update_server=False
[2026-02-06 23:32:27] 2026-02-06 22:31:56,729 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-06 23:32:27] 2026-02-06 22:31:56,729 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-06 23:32:27] 2026-02-06 22:31:57,122 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-06 23:32:27] 2026-02-06 22:31:57,123 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-06 23:32:27] 2026-02-06 22:31:57,123 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-06 23:32:27] 2026-02-06 22:31:57,123 | INFO     | will abort loop
[2026-02-06 23:32:27] 2026-02-06 22:31:57,403 | INFO     | all data control threads have been joined
[2026-02-06 23:32:27] 2026-02-06 22:31:57,678 | INFO     | all payload control threads have been joined
[2026-02-06 23:32:27] 2026-02-06 22:31:57,730 | INFO     | [job] retrieve thread has finished
[2026-02-06 23:32:27] 2026-02-06 22:31:57,734 | INFO     | [job] queue monitor thread has finished
[2026-02-06 23:32:27] 2026-02-06 22:31:57,883 | INFO     | all job control threads have been joined
[2026-02-06 23:32:27] 2026-02-06 22:31:57,979 | INFO     | [monitor] cgroup control has ended
[2026-02-06 23:32:27] 2026-02-06 22:31:58,102 | INFO     | [payload] failed_post thread has finished
[2026-02-06 23:32:27] 2026-02-06 22:31:58,128 | INFO     | [job] job monitor thread has finished
[2026-02-06 23:32:27] 2026-02-06 22:31:58,208 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-06 23:32:27] 2026-02-06 22:31:58,375 | INFO     | [job] validate thread has finished
[2026-02-06 23:32:27] 2026-02-06 22:31:58,409 | INFO     | [data] control thread has finished
[2026-02-06 23:32:27] 2026-02-06 22:31:58,590 | INFO     | [job] create_data_payload thread has finished
[2026-02-06 23:32:27] 2026-02-06 22:31:58,680 | INFO     | [payload] validate_post thread has finished
[2026-02-06 23:32:27] 2026-02-06 22:31:58,683 | INFO     | [payload] control thread has finished
[2026-02-06 23:32:27] 2026-02-06 22:31:58,705 | INFO     | [payload] validate_pre thread has finished
[2026-02-06 23:32:27] 2026-02-06 22:31:58,888 | INFO     | [job] control thread has finished
[2026-02-06 23:32:27] 2026-02-06 22:31:59,018 | INFO     | [payload] execute_payloads thread has finished
[2026-02-06 23:32:27] 2026-02-06 22:31:59,029 | INFO     | [data] copytool_in thread has finished
[2026-02-06 23:32:27] 2026-02-06 22:31:59,174 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-06 23:32:27] 2026-02-06 22:32:00,213 | INFO     | [data] copytool_out thread has finished
[2026-02-06 23:32:27] 2026-02-06 22:32:03,180 | INFO     | [data] queue_monitor thread has finished
[2026-02-06 23:32:27] 2026-02-06 22:32:07,483 | INFO     | job.realtimelogging is not enabled
[2026-02-06 23:32:27] 2026-02-06 22:32:08,489 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-06 23:32:27] 2026-02-06 22:32:10,290 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 123212224829248)>', '<ExcThread(monitor, started 123211605866240)>']
[2026-02-06 23:32:27] 2026-02-06 22:32:15,315 | INFO     | all workflow threads have been joined
[2026-02-06 23:32:27] 2026-02-06 22:32:15,316 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-06 23:32:27] 2026-02-06 22:32:15,316 | INFO     | traces error code: 0
[2026-02-06 23:32:27] 2026-02-06 22:32:15,316 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-06 23:32:27] 2026-02-06 22:32:27,473 | INFO     | PID=150762 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-06 23:32:27] 2026-02-06 22:32:27,474 | INFO     | found 0 job(s) in 20 queues
[2026-02-06 23:32:27] 2026-02-06 22:32:27,474 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-06 23:32:27] 2026-02-06 22:32:27,474 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-06 23:32:27] 2026-02-06 22:32:27,474 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-06 23:32:27] 2026-02-06 22:32:27,474 | CRITICAL | thread 'MainThread' is not alive
[2026-02-06 23:32:27] 2026-02-06 22:32:27,475 | INFO     | [monitor] control thread has ended
[2026-02-06 23:32:27] 2026-02-06 22:32:27,561 [wrapper] ==== pilot stdout END ====
[2026-02-06 23:32:27] 2026-02-06 22:32:27,562 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-06 23:32:27] 2026-02-06 22:32:27,563 [wrapper] pilotpid: 150762
[2026-02-06 23:32:27] 2026-02-06 22:32:27,565 [wrapper] Pilot exit status: 0
[2026-02-06 23:32:27] 2026-02-06 22:32:27,570 [wrapper] pandaids: 6994196099
[2026-02-06 23:32:27] 2026-02-06 22:32:27,587 [wrapper] cleanup supervisor_pilot  160851 150763
[2026-02-06 23:32:27] 2026-02-06 22:32:27,588 [wrapper] Test setup, not cleaning
[2026-02-06 23:32:27] 2026-02-06 22:32:27,589 [wrapper] apfmon messages muted
[2026-02-06 23:32:27] 2026-02-06 22:32:27,590 [wrapper] ==== wrapper stdout END ====
[2026-02-06 23:32:27] 2026-02-06 22:32:27,591 [wrapper] ==== wrapper stderr END ====
[2026-02-06 23:32:27]  *** Error codes and diagnostics ***
[2026-02-06 23:32:27]     "exeErrorCode": 0,
[2026-02-06 23:32:27]     "exeErrorDiag": "",
[2026-02-06 23:32:27]     "pilotErrorCode": 0,
[2026-02-06 23:32:27]     "pilotErrorDiag": "",
[2026-02-06 23:32:27]  *** Listing of results directory ***
[2026-02-06 23:32:27] totale 668176
[2026-02-06 23:32:27] -rw-r--r-- 1 boinc boinc    584422 feb  3 12:11 pilot3.tar.gz
[2026-02-06 23:32:27] -rwx------ 1 boinc boinc     36322 feb  3 12:12 runpilot2-wrapper.sh
[2026-02-06 23:32:27] -rw-r--r-- 1 boinc boinc      5111 feb  3 12:12 queuedata.json
[2026-02-06 23:32:27] -rw-r--r-- 1 boinc boinc       100 feb  6 21:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-06 23:32:27] -rwxr-xr-x 1 boinc boinc      7986 feb  6 21:37 run_atlas
[2026-02-06 23:32:27] -rw-r--r-- 1 boinc boinc       105 feb  6 21:37 job.xml
[2026-02-06 23:32:27] -rw-r--r-- 2 boinc boinc 492280226 feb  6 21:37 EVNT.48318040._000141.pool.root.1
[2026-02-06 23:32:27] -rw-r--r-- 1 boinc boinc      6514 feb  6 21:37 init_data.xml
[2026-02-06 23:32:27] -rw-r--r-- 2 boinc boinc     15845 feb  6 21:37 start_atlas.sh
[2026-02-06 23:32:27] drwxrwx--x 2 boinc boinc      4096 feb  6 21:37 shared
[2026-02-06 23:32:27] -rw-r--r-- 2 boinc boinc    597762 feb  6 21:37 input.tar.gz
[2026-02-06 23:32:27] -rw-r--r-- 1 boinc boinc         0 feb  6 21:37 boinc_lockfile
[2026-02-06 23:32:27] -rw-r--r-- 1 boinc boinc      2534 feb  6 21:37 pandaJob.out
[2026-02-06 23:32:27] -rw------- 1 boinc boinc   1009520 feb  6 21:37 agis_schedconf.cvmfs.json
[2026-02-06 23:32:27] -rw------- 1 boinc boinc   1513088 feb  6 21:37 agis_ddmendpoints.agis.ALL.json
[2026-02-06 23:32:27] -rw------- 1 boinc boinc       416 feb  6 21:37 workernode_map.json
[2026-02-06 23:32:27] drwx------ 5 boinc boinc      4096 feb  6 21:37 pilot3
[2026-02-06 23:32:27] -rw-r--r-- 1 boinc boinc       530 feb  6 23:31 boinc_task_state.xml
[2026-02-06 23:32:27] -rw------- 1 boinc boinc 185347722 feb  6 23:31 HITS.48318042._007267.pool.root.1
[2026-02-06 23:32:27] -rw------- 1 boinc boinc      1009 feb  6 23:31 memory_monitor_summary.json
[2026-02-06 23:32:27] -rw------- 1 boinc boinc    343700 feb  6 23:31 log.48318042._007267.job.log.tgz.1
[2026-02-06 23:32:27] -rw------- 1 boinc boinc      6284 feb  6 23:31 heartbeat.json
[2026-02-06 23:32:27] -rw-r--r-- 1 boinc boinc        27 feb  6 23:32 wrapper_checkpoint.txt
[2026-02-06 23:32:27] -rw-r--r-- 1 boinc boinc      8192 feb  6 23:32 boinc_mmap_file
[2026-02-06 23:32:27] -rw------- 1 boinc boinc       816 feb  6 23:32 pilotlog.txt
[2026-02-06 23:32:27] -rw------- 1 boinc boinc        95 feb  6 23:32 pilot_heartbeat.json
[2026-02-06 23:32:27] -rw------- 1 boinc boinc    982973 feb  6 23:32 log.48318042._007267.job.log.1
[2026-02-06 23:32:27] -rw------- 1 boinc boinc       357 feb  6 23:32 output.list
[2026-02-06 23:32:27] -rw-r--r-- 1 boinc boinc       620 feb  6 23:32 runtime_log
[2026-02-06 23:32:27] -rw------- 1 boinc boinc   1341440 feb  6 23:32 result.tar.gz
[2026-02-06 23:32:27] -rw-r--r-- 1 boinc boinc      8890 feb  6 23:32 runtime_log.err
[2026-02-06 23:32:27] -rw------- 1 boinc boinc       646 feb  6 23:32 f18LDmjVT78n9Rq4apOajLDm4fhM0noT9bVooX4SDmCTUKDmJckE0m.diag
[2026-02-06 23:32:27] -rw-r--r-- 1 boinc boinc     21391 feb  6 23:32 stderr.txt
[2026-02-06 23:32:27] HITS file was successfully produced:
[2026-02-06 23:32:27] -rw------- 1 boinc boinc 185347722 feb  6 23:31 shared/HITS.pool.root.1
[2026-02-06 23:32:27]  *** Contents of shared directory: ***
[2026-02-06 23:32:27] totale 663668
[2026-02-06 23:32:27] -rw-r--r-- 2 boinc boinc 492280226 feb  6 21:37 ATLAS.root_0
[2026-02-06 23:32:27] -rw-r--r-- 2 boinc boinc     15845 feb  6 21:37 start_atlas.sh
[2026-02-06 23:32:27] -rw-r--r-- 2 boinc boinc    597762 feb  6 21:37 input.tar.gz
[2026-02-06 23:32:27] -rw------- 1 boinc boinc 185347722 feb  6 23:31 HITS.pool.root.1
[2026-02-06 23:32:27] -rw------- 1 boinc boinc   1341440 feb  6 23:32 result.tar.gz
23:32:29 (146683): run_atlas exited; CPU time 52299.334612
23:32:29 (146683): called boinc_finish(0)

</stderr_txt>
]]>

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