Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:26:40 (1188853): wrapper (7.7.26015): starting
12:26:40 (1188853): wrapper: running run_atlas (--nthreads 12)
[2026-02-03 12:26:40] Arguments: --nthreads 12
[2026-02-03 12:26:40] Threads: 12
[2026-02-03 12:26:40] Checking for CVMFS
[2026-02-03 12:26:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-03 12:26:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-03 12:26:41] Running cvmfs_config stat atlas.cern.ch
[2026-02-03 12:26:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-03 12:26:42] 2.11.5.0 3294435 93029 222396 155843 1 271 27195863 45568001 18676 130560 0 572078123 99.789 350383299 18020 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-02-03 12:26:42] CVMFS is ok
[2026-02-03 12:26:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-03 12:26:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-03 12:26:42] Further information can be found at the LHC@home message board.
[2026-02-03 12:26:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 12:26:42] Checking for apptainer binary...
[2026-02-03 12:26:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-03 12:26:42] Running /usr/bin/apptainer --version
[2026-02-03 12:26:42] apptainer version 1.4.1-1.el9
[2026-02-03 12:26:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 12:26:43] wns0052.triumf.lcg
[2026-02-03 12:26:43] apptainer works
[2026-02-03 12:26:43] Set ATHENA_PROC_NUMBER=12
[2026-02-03 12:26:43] Set ATHENA_CORE_NUMBER=12
[2026-02-03 12:26:43] Starting ATLAS job with PandaID=6994197853
[2026-02-03 12:26:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-03 12:33:10]  *** The last 200 lines of the pilot log: ***
[2026-02-03 12:33:10] 2026-02-03 20:31:59,498 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-03 12:33:10] 2026-02-03 20:31:59,498 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-03 12:33:10] 2026-02-03 20:31:59,509 | WARNING  | wrong length of table data, x=[1770150542.0], y=[1440.0] (must be same and length>=4)
[2026-02-03 12:33:10] 2026-02-03 20:31:59,510 | INFO     | could have reported an average CPU frequency of 2099 MHz (4 samples)
[2026-02-03 12:33:10] 2026-02-03 20:31:59,510 | INFO     | ..............................
[2026-02-03 12:33:10] 2026-02-03 20:31:59,510 | INFO     | . Timing measurements:
[2026-02-03 12:33:10] 2026-02-03 20:31:59,510 | INFO     | . get job = 0 s
[2026-02-03 12:33:10] 2026-02-03 20:31:59,510 | INFO     | . initial setup = 33 s
[2026-02-03 12:33:10] 2026-02-03 20:31:59,510 | INFO     | . payload setup = 30 s
[2026-02-03 12:33:10] 2026-02-03 20:31:59,510 | INFO     | . stage-in = 0 s
[2026-02-03 12:33:10] 2026-02-03 20:31:59,510 | INFO     | . payload execution = 76 s
[2026-02-03 12:33:10] 2026-02-03 20:31:59,510 | INFO     | . stage-out = 1 s
[2026-02-03 12:33:10] 2026-02-03 20:31:59,510 | INFO     | . log creation = 0 s
[2026-02-03 12:33:10] 2026-02-03 20:31:59,511 | INFO     | ..............................
[2026-02-03 12:33:10] 2026-02-03 20:31:59,511 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-03 12:33:10] 2026-02-03 20:31:59,511 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6994197853/pilotlog.txt
[2026-02-03 12:33:10] 2026-02-03 20:31:59,665 | INFO     | time since job start (236s) is within the limit (349056.0s)
[2026-02-03 12:33:10] 2026-02-03 20:31:59,776 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-03 12:33:10] - Log from pilotlog.txt -
[2026-02-03 12:33:10] 2026-02-03 20:31:59,497 | INFO     | extracted standard info from prmon json
[2026-02-03 12:33:10] 2026-02-03 20:31:59,497 | INFO     | extracted standard memory fields from prmon json
[2026-02-03 12:33:10] 2026-02-03 20:31:59,497 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-03 12:33:10] 2026-02-03 20:31:59,498 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-03 12:33:10] 2026-02-03 20:31:59,498 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-03 12:33:10] 2026-02-03 20:31:59,509 | WARNING  | wrong length of table data, x=[1770150542.0], y=[1440.0] (must be same and length>=4)
[2026-02-03 12:33:10] 2026-02-03 20:31:59,510 | INFO     | could have reported an average CPU frequency of 2099 MHz (4 samples)
[2026-02-03 12:33:10] 2026-02-03 20:31:59,510 | INFO     | ..............................
[2026-02-03 12:33:10] 2026-02-03 20:31:59,510 | INFO     | . Timing measurements:
[2026-02-03 12:33:10] 2026-02-03 20:31:59,510 | INFO     | . get job = 0 s
[2026-02-03 12:33:10] 2026-02-03 20:31:59,510 | INFO     | . initial setup = 33 s
[2026-02-03 12:33:10] 2026-02-03 20:31:59,510 | INFO     | . payload setup = 30 s
[2026-02-03 12:33:10] 2026-02-03 20:31:59,510 | INFO     | . stage-in = 0 s
[2026-02-03 12:33:10] 2026-02-03 20:31:59,510 | INFO     | . payload execution = 76 s
[2026-02-03 12:33:10] 2026-02-03 20:31:59,510 | INFO     | . stage-out = 1 s
[2026-02-03 12:33:10] 2026-02-03 20:31:59,510 | INFO     | . log creation = 0 s
[2026-02-03 12:33:10] 2026-02-03 20:31:59,511 | INFO     | ..............................
[2026-02-03 12:33:10] 2026-02-03 20:31:59,511 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-03 12:33:10] 2026-02-03 20:31:59,511 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6994197853/pilotlog.txt
[2026-02-03 12:33:10] 2026-02-03 20:31:59,665 | INFO     | time since job start (236s) is within the limit (349056.0s)
[2026-02-03 12:33:10] 2026-02-03 20:31:59,777 | WARNING  | 
[2026-02-03 12:33:10] [begin log extracts]
[2026-02-03 12:33:10] - Log from pilotlog.txt -
[2026-02-03 12:33:10] 2026-02-03 20:31:59,497 | INFO     | extracted standard info from prmon json
[2026-02-03 12:33:10] 2026-02-03 20:31:59,497 | INFO     | extracted standard memory fields from prmon json
[2026-02-03 12:33:10] 2026-02-03 20:31:59,497 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-03 12:33:10] 2026-02-03 20:31:59,498 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-03 12:33:10] 2026-02-03 20:31:59,498 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-03 12:33:10] 2026-02-03 20:31:59,509 | WARNING  | wrong length of table data, x=[1770150542.0], y=[1440.0] (must be same and length>=4)
[2026-02-03 12:33:10] 2026-02-03 20:31:59,510 | INFO     | could have reported an average CPU frequency of 2099 MHz (4 samples)
[2026-02-03 12:33:10] 2026-02-03 20:31:59,510 | INFO     | ..............................
[2026-02-03 12:33:10] 2026-02-03 20:31:59,510 | INFO     | . Timing measurements:
[2026-02-03 12:33:10] 2026-02-03 20:31:59,510 | INFO     | . get job = 0 s
[2026-02-03 12:33:10] 2026-02-03 20:31:59,510 | INFO     | . initial setup = 33 s
[2026-02-03 12:33:10] 2026-02-03 20:31:59,510 | INFO     | . payload setup = 30 s
[2026-02-03 12:33:10] 2026-02-03 20:31:59,510 | INFO     | . stage-in = 0 s
[2026-02-03 12:33:10] 2026-02-03 20:31:59,510 | INFO     | . payload execution = 76 s
[2026-02-03 12:33:10] 2026-02-03 20:31:59,510 | INFO     | . stage-out = 1 s
[2026-02-03 12:33:10] 2026-02-03 20:31:59,510 | INFO     | . log creation = 0 s
[2026-02-03 12:33:10] 2026-02-03 20:31:59,511 | INFO     | ..............................
[2026-02-03 12:33:10] 2026-02-03 20:31:59,511 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-03 12:33:10] 2026-02-03 20:31:59,511 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6994197853/pilotlog.txt
[2026-02-03 12:33:10] 2026-02-03 20:31:59,665 | INFO     | time since job start (236s) is within the limit (349056.0s)
[2026-02-03 12:33:10] [end log extracts]
[2026-02-03 12:33:10] 2026-02-03 20:31:59,777 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-03 12:33:10] 2026-02-03 20:31:59,778 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-03 12:33:10] 2026-02-03 20:32:00,112 | INFO     | 
[2026-02-03 12:33:10] 2026-02-03 20:32:00,113 | INFO     | job summary report
[2026-02-03 12:33:10] 2026-02-03 20:32:00,113 | INFO     | --------------------------------------------------
[2026-02-03 12:33:10] 2026-02-03 20:32:00,113 | INFO     | PanDA job id: 6994197853
[2026-02-03 12:33:10] 2026-02-03 20:32:00,113 | INFO     | task id: 48442098
[2026-02-03 12:33:10] 2026-02-03 20:32:00,113 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-03 12:29:48,696 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-03 12:33:10] 2026-02-03 20:32:00,113 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-03 12:33:10] 2026-02-03 20:32:00,113 | INFO     | pilot state: failed 
[2026-02-03 12:33:10] 2026-02-03 20:32:00,113 | INFO     | transexitcode: 65
[2026-02-03 12:33:10] 2026-02-03 20:32:00,113 | INFO     | exeerrorcode: 65
[2026-02-03 12:33:10] 2026-02-03 20:32:00,113 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-03 12:33:10] 2026-02-03 20:32:00,113 | INFO     | exitcode: 65
[2026-02-03 12:33:10] 2026-02-03 20:32:00,113 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-03 12:33:10] 2026-02-03 20:32:00,113 | INFO     | cpuconsumptiontime: 17 s
[2026-02-03 12:33:10] 2026-02-03 20:32:00,113 | INFO     | nevents: 0
[2026-02-03 12:33:10] 2026-02-03 20:32:00,113 | INFO     | neventsw: 0
[2026-02-03 12:33:10] 2026-02-03 20:32:00,114 | INFO     | pid: 1197714
[2026-02-03 12:33:10] 2026-02-03 20:32:00,114 | INFO     | pgrp: 1197714
[2026-02-03 12:33:10] 2026-02-03 20:32:00,114 | INFO     | corecount: 12
[2026-02-03 12:33:10] 2026-02-03 20:32:00,114 | INFO     | event service: False
[2026-02-03 12:33:10] 2026-02-03 20:32:00,114 | INFO     | sizes: {0: 2277784, 1: 2277868, 2: 2278329, 3: 2278329, 110: 2301618, 113: 2305910, 117: 2306066, 233: 2306232}
[2026-02-03 12:33:10] 2026-02-03 20:32:00,114 | INFO     | --------------------------------------------------
[2026-02-03 12:33:10] 2026-02-03 20:32:00,114 | INFO     | 
[2026-02-03 12:33:10] 2026-02-03 20:32:00,114 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-03 12:33:10] 2026-02-03 20:32:00,300 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-03 12:33:10] 2026-02-03 20:32:00,300 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-03 12:33:10] 2026-02-03 20:32:00,300 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-03 12:33:10] 2026-02-03 20:32:00,300 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-03 12:33:10] 2026-02-03 20:32:00,300 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-03 12:33:10] 2026-02-03 20:32:00,300 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-03 12:33:10] 2026-02-03 20:32:00,300 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-03 12:33:10] 2026-02-03 20:32:00,300 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-03 12:33:10] 2026-02-03 20:32:00,301 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-03 12:33:10] 2026-02-03 20:32:00,301 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-03 12:33:10] 2026-02-03 20:32:00,301 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-03 12:33:10] 2026-02-03 20:32:00,301 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-03 12:33:10] 2026-02-03 20:32:00,301 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-03 12:33:10] 2026-02-03 20:32:00,301 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-03 12:33:10] 2026-02-03 20:32:00,301 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-03 12:33:10] 2026-02-03 20:32:00,301 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-03 12:33:10] 2026-02-03 20:32:00,301 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-03 12:33:10] 2026-02-03 20:32:00,301 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-03 12:33:10] 2026-02-03 20:32:00,301 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-03 12:33:10] 2026-02-03 20:32:00,301 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-03 12:33:10] 2026-02-03 20:32:00,301 | INFO     | job 6994197853 has completed (purged errors)
[2026-02-03 12:33:10] 2026-02-03 20:32:00,301 | INFO     | overall cleanup function is called
[2026-02-03 12:33:10] 2026-02-03 20:32:01,308 | INFO     | --- collectZombieJob: --- 10, [1197714]
[2026-02-03 12:33:10] 2026-02-03 20:32:01,309 | INFO     | zombie collector waiting for pid 1197714
[2026-02-03 12:33:10] 2026-02-03 20:32:01,309 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-03 12:33:10] 2026-02-03 20:32:01,309 | INFO     | collected zombie processes
[2026-02-03 12:33:10] 2026-02-03 20:32:01,309 | INFO     | will attempt to kill all subprocesses of pid=1197714
[2026-02-03 12:33:10] 2026-02-03 20:32:02,473 | INFO     | process IDs to be killed: [1197714] (in reverse order)
[2026-02-03 12:33:10] 2026-02-03 20:32:02,563 | WARNING  | found no corresponding commands to process id(s)
[2026-02-03 12:33:10] 2026-02-03 20:32:02,564 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-03 12:33:10] 2026-02-03 20:32:02,628 | INFO     | did not find any defunct processes belonging to 1197714
[2026-02-03 12:33:10] 2026-02-03 20:32:02,675 | INFO     | did not find any defunct processes belonging to 1197714
[2026-02-03 12:33:10] 2026-02-03 20:32:02,676 | INFO     | ready for new job
[2026-02-03 12:33:10] 2026-02-03 20:32:02,676 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-03 12:33:10] 2026-02-03 20:32:02,677 | INFO     | **************************************
[2026-02-03 12:33:10] 2026-02-03 20:32:02,677 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-03 12:33:10] 2026-02-03 20:32:02,696 | INFO     | **************************************
[2026-02-03 12:33:10] 2026-02-03 20:32:02,697 | INFO     | 
[2026-02-03 12:33:10] 2026-02-03 20:32:02,699 | INFO     | architecture information:
[2026-02-03 12:33:10] 2026-02-03 20:32:02,705 | INFO     | executing command: cat /etc/os-release
[2026-02-03 12:33:10] 2026-02-03 20:32:02,885 | INFO     | cat /etc/os-release:
[2026-02-03 12:33:10] NAME="CentOS Linux"
[2026-02-03 12:33:10] VERSION="7 (Core)"
[2026-02-03 12:33:10] ID="centos"
[2026-02-03 12:33:10] ID_LIKE="rhel fedora"
[2026-02-03 12:33:10] VERSION_ID="7"
[2026-02-03 12:33:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-03 12:33:10] ANSI_COLOR="0;31"
[2026-02-03 12:33:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-03 12:33:10] HOME_URL="https://www.centos.org/"
[2026-02-03 12:33:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-03 12:33:10] 
[2026-02-03 12:33:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-03 12:33:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-03 12:33:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-03 12:33:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-03 12:33:10] 
[2026-02-03 12:33:10] 2026-02-03 20:32:02,885 | INFO     | **************************************
[2026-02-03 12:33:10] 2026-02-03 20:32:03,389 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-03 12:33:10] 2026-02-03 20:32:03,427 | INFO     | sufficient remaining disk space (2013805936640 B)
[2026-02-03 12:33:10] 2026-02-03 20:32:03,427 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-03 12:33:10] 2026-02-03 20:32:03,427 | INFO     | current server update state: UPDATING_FINAL
[2026-02-03 12:33:10] 2026-02-03 20:32:03,435 | INFO     | update_server=False
[2026-02-03 12:33:10] 2026-02-03 20:32:03,435 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-03 12:33:10] 2026-02-03 20:32:03,436 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-03 12:33:10] 2026-02-03 20:32:03,725 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-03 12:33:10] 2026-02-03 20:32:04,036 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-03 12:33:10] 2026-02-03 20:32:04,037 | INFO     | aborting loop
[2026-02-03 12:33:10] 2026-02-03 20:32:04,041 | INFO     | all job control threads have been joined
[2026-02-03 12:33:10] 2026-02-03 20:32:04,158 | INFO     | all data control threads have been joined
[2026-02-03 12:33:10] 2026-02-03 20:32:04,444 | INFO     | [job] retrieve thread has finished
[2026-02-03 12:33:10] 2026-02-03 20:32:04,461 | INFO     | [payload] validate_post thread has finished
[2026-02-03 12:33:10] 2026-02-03 20:32:04,557 | INFO     | [job] create_data_payload thread has finished
[2026-02-03 12:33:10] 2026-02-03 20:32:04,908 | INFO     | all payload control threads have been joined
[2026-02-03 12:33:10] 2026-02-03 20:32:04,971 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-03 12:33:10] 2026-02-03 20:32:05,032 | INFO     | [payload] execute_payloads thread has finished
[2026-02-03 12:33:10] 2026-02-03 20:32:05,042 | INFO     | [job] job monitor thread has finished
[2026-02-03 12:33:10] 2026-02-03 20:32:05,047 | INFO     | [job] control thread has finished
[2026-02-03 12:33:10] 2026-02-03 20:32:05,165 | INFO     | [data] control thread has finished
[2026-02-03 12:33:10] 2026-02-03 20:32:05,176 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-03 12:33:10] 2026-02-03 20:32:05,589 | INFO     | [payload] failed_post thread has finished
[2026-02-03 12:33:10] 2026-02-03 20:32:05,607 | INFO     | [job] validate thread has finished
[2026-02-03 12:33:10] 2026-02-03 20:32:05,620 | INFO     | [payload] validate_pre thread has finished
[2026-02-03 12:33:10] 2026-02-03 20:32:05,742 | INFO     | [data] copytool_out thread has finished
[2026-02-03 12:33:10] 2026-02-03 20:32:05,894 | INFO     | [data] copytool_in thread has finished
[2026-02-03 12:33:10] 2026-02-03 20:32:05,913 | INFO     | [payload] control thread has finished
[2026-02-03 12:33:10] 2026-02-03 20:32:06,182 | INFO     | [job] queue monitor thread has finished
[2026-02-03 12:33:10] 2026-02-03 20:32:07,445 | INFO     | [data] queue_monitor thread has finished
[2026-02-03 12:33:10] 2026-02-03 20:32:33,303 | INFO     | PID=1192742 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-03 12:33:10] 2026-02-03 20:32:33,304 | INFO     | .. there are 35 such processes running
[2026-02-03 12:33:10] 2026-02-03 20:32:33,304 | INFO     | found 0 job(s) in 20 queues
[2026-02-03 12:33:10] 2026-02-03 20:32:33,304 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-03 12:33:10] 2026-02-03 20:32:33,304 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-03 12:33:10] 2026-02-03 20:33:03,446 | INFO     | [monitor] cgroup control has ended
[2026-02-03 12:33:10] 2026-02-03 20:33:03,851 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140500829550400)>', '<ExcThread(monitor, started 140499990083328)>']
[2026-02-03 12:33:10] 2026-02-03 20:33:04,504 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-03 12:33:10] 2026-02-03 20:33:04,504 | INFO     | [monitor] control thread has ended
[2026-02-03 12:33:10] 2026-02-03 20:33:08,877 | INFO     | all workflow threads have been joined
[2026-02-03 12:33:10] 2026-02-03 20:33:08,878 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-03 12:33:10] 2026-02-03 20:33:08,878 | INFO     | traces error code: 0
[2026-02-03 12:33:10] 2026-02-03 20:33:08,878 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-03 12:33:10] 2026-02-03 20:33:09,154 [wrapper] ==== pilot stdout END ====
[2026-02-03 12:33:10] 2026-02-03 20:33:09,191 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-03 12:33:10] 2026-02-03 20:33:09,208 [wrapper] pilotpid: 1192742
[2026-02-03 12:33:10] 2026-02-03 20:33:09,226 [wrapper] Pilot exit status: 0
[2026-02-03 12:33:10] 2026-02-03 20:33:09,362 [wrapper] pandaids: 6994197853
[2026-02-03 12:33:10] 2026-02-03 20:33:09,639 [wrapper] cleanup supervisor_pilot 1192748 1192743
[2026-02-03 12:33:10] 2026-02-03 20:33:09,683 [wrapper] Test setup, not cleaning
[2026-02-03 12:33:10] 2026-02-03 20:33:09,707 [wrapper] apfmon messages muted
[2026-02-03 12:33:10] 2026-02-03 20:33:09,739 [wrapper] ==== wrapper stdout END ====
[2026-02-03 12:33:10] 2026-02-03 20:33:09,757 [wrapper] ==== wrapper stderr END ====
[2026-02-03 12:33:10]  *** Error codes and diagnostics ***
[2026-02-03 12:33:10]     "exeErrorCode": 65,
[2026-02-03 12:33:10]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-03 12:33:10]     "pilotErrorCode": 1305,
[2026-02-03 12:33:10]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-03 12:33:10]  *** Listing of results directory ***
[2026-02-03 12:33:10] total 490352
[2026-02-03 12:33:10] -rwx------. 1 boinc boinc     36322 Feb  3 07:14 runpilot2-wrapper.sh
[2026-02-03 12:33:10] -rw-r--r--. 1 boinc boinc    584422 Feb  3 07:18 pilot3.tar.gz
[2026-02-03 12:33:10] -rw-r--r--. 1 boinc boinc      5111 Feb  3 07:18 queuedata.json
[2026-02-03 12:33:10] -rw-r--r--. 1 boinc boinc       100 Feb  3 12:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-03 12:33:10] -rwxr-xr-x. 1 boinc boinc      7986 Feb  3 12:26 run_atlas
[2026-02-03 12:33:10] -rw-r--r--. 1 boinc boinc       105 Feb  3 12:26 job.xml
[2026-02-03 12:33:10] -rw-r--r--. 2 boinc boinc 497956584 Feb  3 12:26 EVNT.48442096._000026.pool.root.1
[2026-02-03 12:33:10] -rw-r--r--. 1 boinc boinc      6589 Feb  3 12:26 init_data.xml
[2026-02-03 12:33:10] -rw-r--r--. 2 boinc boinc     15845 Feb  3 12:26 start_atlas.sh
[2026-02-03 12:33:10] drwxrwx--x. 2 boinc boinc      4096 Feb  3 12:26 shared
[2026-02-03 12:33:10] -rw-r--r--. 2 boinc boinc    597758 Feb  3 12:26 input.tar.gz
[2026-02-03 12:33:10] -rw-r--r--. 1 boinc boinc         0 Feb  3 12:26 boinc_lockfile
[2026-02-03 12:33:10] -rw-r--r--. 1 boinc boinc      2528 Feb  3 12:26 pandaJob.out
[2026-02-03 12:33:10] -rw-------. 1 boinc boinc   1009252 Feb  3 12:27 agis_schedconf.cvmfs.json
[2026-02-03 12:33:10] -rw-------. 1 boinc boinc   1511668 Feb  3 12:27 agis_ddmendpoints.agis.ALL.json
[2026-02-03 12:33:10] -rw-------. 1 boinc boinc       445 Feb  3 12:28 workernode_map.json
[2026-02-03 12:33:10] drwx------. 5 boinc boinc      4096 Feb  3 12:28 pilot3
[2026-02-03 12:33:10] -rw-r--r--. 1 boinc boinc       524 Feb  3 12:29 boinc_task_state.xml
[2026-02-03 12:33:10] -rw-------. 1 boinc boinc       958 Feb  3 12:29 memory_monitor_summary.json
[2026-02-03 12:33:10] -rw-------. 1 boinc boinc     21166 Feb  3 12:29 log.48442098._001204.job.log.tgz.1
[2026-02-03 12:33:10] -rw-------. 1 boinc boinc      7035 Feb  3 12:31 heartbeat.json
[2026-02-03 12:33:10] -rw-------. 1 boinc boinc        95 Feb  3 12:32 pilot_heartbeat.json
[2026-02-03 12:33:10] -rw-r--r--. 1 boinc boinc        23 Feb  3 12:33 wrapper_checkpoint.txt
[2026-02-03 12:33:10] -rw-------. 1 boinc boinc      4819 Feb  3 12:33 pilotlog.txt
[2026-02-03 12:33:10] -rw-------. 1 boinc boinc     89489 Feb  3 12:33 log.48442098._001204.job.log.1
[2026-02-03 12:33:10] -rw-r--r--. 1 boinc boinc      8192 Feb  3 12:33 boinc_mmap_file
[2026-02-03 12:33:10] -rw-------. 1 boinc boinc       188 Feb  3 12:33 output.list
[2026-02-03 12:33:10] -rw-r--r--. 1 boinc boinc       620 Feb  3 12:33 runtime_log
[2026-02-03 12:33:10] -rw-------. 1 boinc boinc    133120 Feb  3 12:33 result.tar.gz
[2026-02-03 12:33:10] -rw-r--r--. 1 boinc boinc      8635 Feb  3 12:33 runtime_log.err
[2026-02-03 12:33:10] -rw-------. 1 boinc boinc       646 Feb  3 12:33 JatMDmEIX78nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmTRVKDmls4rrn.diag
[2026-02-03 12:33:10] -rw-r--r--. 1 boinc boinc     21734 Feb  3 12:33 stderr.txt
[2026-02-03 12:33:10] No HITS result produced
[2026-02-03 12:33:10]  *** Contents of shared directory: ***
[2026-02-03 12:33:10] total 487024
[2026-02-03 12:33:10] -rw-r--r--. 2 boinc boinc 497956584 Feb  3 12:26 ATLAS.root_0
[2026-02-03 12:33:10] -rw-r--r--. 2 boinc boinc     15845 Feb  3 12:26 start_atlas.sh
[2026-02-03 12:33:10] -rw-r--r--. 2 boinc boinc    597758 Feb  3 12:26 input.tar.gz
[2026-02-03 12:33:10] -rw-------. 1 boinc boinc    133120 Feb  3 12:33 result.tar.gz
12:33:11 (1188853): run_atlas exited; CPU time 27.654310
12:33:11 (1188853): called boinc_finish(0)

</stderr_txt>
]]>

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