Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:12:19 (3632185): wrapper (7.7.26015): starting
12:12:19 (3632185): wrapper: running run_atlas (--nthreads 8)
[2026-02-03 12:12:19] Arguments: --nthreads 8
[2026-02-03 12:12:19] Threads: 8
[2026-02-03 12:12:19] Checking for CVMFS
[2026-02-03 12:12:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-03 12:12:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-03 12:12:19] Running cvmfs_config stat atlas.cern.ch
[2026-02-03 12:12:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-03 12:12:19] 2.11.3.0 700522 93151 202544 155842 1 410 45517349 45568001 13656 130560 0 509807451 99.799 309488148 18390 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-02-03 12:12:19] CVMFS is ok
[2026-02-03 12:12:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-03 12:12:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-03 12:12:19] Further information can be found at the LHC@home message board.
[2026-02-03 12:12:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 12:12:19] Checking for apptainer binary...
[2026-02-03 12:12:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-03 12:12:19] Running /usr/bin/apptainer --version
[2026-02-03 12:12:19] apptainer version 1.4.1-1.el9
[2026-02-03 12:12:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 12:12:19] wns0006.triumf.lcg
[2026-02-03 12:12:19] apptainer works
[2026-02-03 12:12:19] Set ATHENA_PROC_NUMBER=8
[2026-02-03 12:12:19] Set ATHENA_CORE_NUMBER=8
[2026-02-03 12:12:20] Starting ATLAS job with PandaID=6999412782
[2026-02-03 12:12:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-03 12:15:45]  *** The last 200 lines of the pilot log: ***
[2026-02-03 12:15:45] 2026-02-03 20:15:12,906 | INFO     | could have reported an average CPU frequency of 2096 MHz (4 samples)
[2026-02-03 12:15:45] 2026-02-03 20:15:12,906 | INFO     | ..............................
[2026-02-03 12:15:45] 2026-02-03 20:15:12,906 | INFO     | . Timing measurements:
[2026-02-03 12:15:45] 2026-02-03 20:15:12,906 | INFO     | . get job = 0 s
[2026-02-03 12:15:45] 2026-02-03 20:15:12,906 | INFO     | . initial setup = 6 s
[2026-02-03 12:15:45] 2026-02-03 20:15:12,906 | INFO     | . payload setup = 5 s
[2026-02-03 12:15:45] 2026-02-03 20:15:12,906 | INFO     | . stage-in = 0 s
[2026-02-03 12:15:45] 2026-02-03 20:15:12,906 | INFO     | . payload execution = 20 s
[2026-02-03 12:15:45] 2026-02-03 20:15:12,906 | INFO     | . stage-out = 0 s
[2026-02-03 12:15:45] 2026-02-03 20:15:12,906 | INFO     | . log creation = 0 s
[2026-02-03 12:15:45] 2026-02-03 20:15:12,906 | INFO     | ..............................
[2026-02-03 12:15:45] 2026-02-03 20:15:12,906 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-03 12:15:45] 2026-02-03 20:15:12,907 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6999412782/pilotlog.txt
[2026-02-03 12:15:45] 2026-02-03 20:15:12,961 | INFO     | monitor loop #54: job 0:6999412782 is in state 'failed'
[2026-02-03 12:15:45] 2026-02-03 20:15:12,961 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2026-02-03 12:15:45] 2026-02-03 20:15:13,016 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-03 12:15:45] - Log from pilotlog.txt -
[2026-02-03 12:15:45] 2026-02-03 20:15:12,904 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-03 12:15:45] 2026-02-03 20:15:12,904 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-03 12:15:45] 2026-02-03 20:15:12,905 | WARNING  | found no stored workdir sizes
[2026-02-03 12:15:45] 2026-02-03 20:15:12,905 | INFO     | will not add max space = 0 B to job metrics
[2026-02-03 12:15:45] 2026-02-03 20:15:12,905 | WARNING  | wrong length of table data, x=[1770149577.0], y=[1282.0] (must be same and length>=4)
[2026-02-03 12:15:45] 2026-02-03 20:15:12,906 | INFO     | could have reported an average CPU frequency of 2096 MHz (4 samples)
[2026-02-03 12:15:45] 2026-02-03 20:15:12,906 | INFO     | ..............................
[2026-02-03 12:15:45] 2026-02-03 20:15:12,906 | INFO     | . Timing measurements:
[2026-02-03 12:15:45] 2026-02-03 20:15:12,906 | INFO     | . get job = 0 s
[2026-02-03 12:15:45] 2026-02-03 20:15:12,906 | INFO     | . initial setup = 6 s
[2026-02-03 12:15:45] 2026-02-03 20:15:12,906 | INFO     | . payload setup = 5 s
[2026-02-03 12:15:45] 2026-02-03 20:15:12,906 | INFO     | . stage-in = 0 s
[2026-02-03 12:15:45] 2026-02-03 20:15:12,906 | INFO     | . payload execution = 20 s
[2026-02-03 12:15:45] 2026-02-03 20:15:12,906 | INFO     | . stage-out = 0 s
[2026-02-03 12:15:45] 2026-02-03 20:15:12,906 | INFO     | . log creation = 0 s
[2026-02-03 12:15:45] 2026-02-03 20:15:12,906 | INFO     | ..............................
[2026-02-03 12:15:45] 2026-02-03 20:15:12,906 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-03 12:15:45] 2026-02-03 20:15:12,907 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6999412782/pilotlog.txt
[2026-02-03 12:15:45] 2026-02-03 20:15:12,961 | INFO     | monitor loop #54: job 0:6999412782 is in state 'failed'
[2026-02-03 12:15:45] 2026-02-03 20:15:12,961 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2026-02-03 12:15:45] 2026-02-03 20:15:13,017 | WARNING  | 
[2026-02-03 12:15:45] [begin log extracts]
[2026-02-03 12:15:45] - Log from pilotlog.txt -
[2026-02-03 12:15:45] 2026-02-03 20:15:12,904 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-03 12:15:45] 2026-02-03 20:15:12,904 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-03 12:15:45] 2026-02-03 20:15:12,905 | WARNING  | found no stored workdir sizes
[2026-02-03 12:15:45] 2026-02-03 20:15:12,905 | INFO     | will not add max space = 0 B to job metrics
[2026-02-03 12:15:45] 2026-02-03 20:15:12,905 | WARNING  | wrong length of table data, x=[1770149577.0], y=[1282.0] (must be same and length>=4)
[2026-02-03 12:15:45] 2026-02-03 20:15:12,906 | INFO     | could have reported an average CPU frequency of 2096 MHz (4 samples)
[2026-02-03 12:15:45] 2026-02-03 20:15:12,906 | INFO     | ..............................
[2026-02-03 12:15:45] 2026-02-03 20:15:12,906 | INFO     | . Timing measurements:
[2026-02-03 12:15:45] 2026-02-03 20:15:12,906 | INFO     | . get job = 0 s
[2026-02-03 12:15:45] 2026-02-03 20:15:12,906 | INFO     | . initial setup = 6 s
[2026-02-03 12:15:45] 2026-02-03 20:15:12,906 | INFO     | . payload setup = 5 s
[2026-02-03 12:15:45] 2026-02-03 20:15:12,906 | INFO     | . stage-in = 0 s
[2026-02-03 12:15:45] 2026-02-03 20:15:12,906 | INFO     | . payload execution = 20 s
[2026-02-03 12:15:45] 2026-02-03 20:15:12,906 | INFO     | . stage-out = 0 s
[2026-02-03 12:15:45] 2026-02-03 20:15:12,906 | INFO     | . log creation = 0 s
[2026-02-03 12:15:45] 2026-02-03 20:15:12,906 | INFO     | ..............................
[2026-02-03 12:15:45] 2026-02-03 20:15:12,906 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-03 12:15:45] 2026-02-03 20:15:12,907 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6999412782/pilotlog.txt
[2026-02-03 12:15:45] 2026-02-03 20:15:12,961 | INFO     | monitor loop #54: job 0:6999412782 is in state 'failed'
[2026-02-03 12:15:45] 2026-02-03 20:15:12,961 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2026-02-03 12:15:45] [end log extracts]
[2026-02-03 12:15:45] 2026-02-03 20:15:13,017 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-03 12:15:45] 2026-02-03 20:15:13,017 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-03 12:15:45] 2026-02-03 20:15:13,190 | INFO     | 
[2026-02-03 12:15:45] 2026-02-03 20:15:13,190 | INFO     | job summary report
[2026-02-03 12:15:45] 2026-02-03 20:15:13,190 | INFO     | --------------------------------------------------
[2026-02-03 12:15:45] 2026-02-03 20:15:13,190 | INFO     | PanDA job id: 6999412782
[2026-02-03 12:15:45] 2026-02-03 20:15:13,190 | INFO     | task id: 48317892
[2026-02-03 12:15:45] 2026-02-03 20:15:13,190 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-03 12:13:06,679 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-03 12:15:45] 2026-02-03 20:15:13,190 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-03 12:15:45] 2026-02-03 20:15:13,190 | INFO     | pilot state: failed 
[2026-02-03 12:15:45] 2026-02-03 20:15:13,191 | INFO     | transexitcode: 65
[2026-02-03 12:15:45] 2026-02-03 20:15:13,191 | INFO     | exeerrorcode: 65
[2026-02-03 12:15:45] 2026-02-03 20:15:13,191 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-03 12:15:45] 2026-02-03 20:15:13,191 | INFO     | exitcode: 65
[2026-02-03 12:15:45] 2026-02-03 20:15:13,191 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-03 12:15:45] 2026-02-03 20:15:13,191 | INFO     | cpuconsumptiontime: 13 s
[2026-02-03 12:15:45] 2026-02-03 20:15:13,191 | INFO     | nevents: 0
[2026-02-03 12:15:45] 2026-02-03 20:15:13,191 | INFO     | neventsw: 0
[2026-02-03 12:15:45] 2026-02-03 20:15:13,191 | INFO     | pid: 3640394
[2026-02-03 12:15:45] 2026-02-03 20:15:13,191 | INFO     | pgrp: 3640394
[2026-02-03 12:15:45] 2026-02-03 20:15:13,191 | INFO     | corecount: 8
[2026-02-03 12:15:45] 2026-02-03 20:15:13,191 | INFO     | event service: False
[2026-02-03 12:15:45] 2026-02-03 20:15:13,191 | INFO     | sizes: {0: 2277958, 1: 2278248, 11: 2278248, 29: 2301552, 30: 2305844, 32: 2305872, 148: 2306166}
[2026-02-03 12:15:45] 2026-02-03 20:15:13,191 | INFO     | --------------------------------------------------
[2026-02-03 12:15:45] 2026-02-03 20:15:13,191 | INFO     | 
[2026-02-03 12:15:45] 2026-02-03 20:15:13,192 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-03 12:15:45] 2026-02-03 20:15:13,226 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-03 12:15:45] 2026-02-03 20:15:13,226 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-03 12:15:45] 2026-02-03 20:15:13,226 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-03 12:15:45] 2026-02-03 20:15:13,226 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-03 12:15:45] 2026-02-03 20:15:13,226 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-03 12:15:45] 2026-02-03 20:15:13,227 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-03 12:15:45] 2026-02-03 20:15:13,227 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-03 12:15:45] 2026-02-03 20:15:13,227 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-03 12:15:45] 2026-02-03 20:15:13,227 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-03 12:15:45] 2026-02-03 20:15:13,227 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-03 12:15:45] 2026-02-03 20:15:13,227 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-03 12:15:45] 2026-02-03 20:15:13,227 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-03 12:15:45] 2026-02-03 20:15:13,227 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-03 12:15:45] 2026-02-03 20:15:13,227 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-03 12:15:45] 2026-02-03 20:15:13,227 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-03 12:15:45] 2026-02-03 20:15:13,227 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-03 12:15:45] 2026-02-03 20:15:13,227 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-03 12:15:45] 2026-02-03 20:15:13,227 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-03 12:15:45] 2026-02-03 20:15:13,228 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-03 12:15:45] 2026-02-03 20:15:13,228 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-03 12:15:45] 2026-02-03 20:15:13,228 | INFO     | job 6999412782 has completed (purged errors)
[2026-02-03 12:15:45] 2026-02-03 20:15:13,228 | INFO     | overall cleanup function is called
[2026-02-03 12:15:45] 2026-02-03 20:15:14,234 | INFO     | --- collectZombieJob: --- 10, [3640394]
[2026-02-03 12:15:45] 2026-02-03 20:15:14,234 | INFO     | zombie collector waiting for pid 3640394
[2026-02-03 12:15:45] 2026-02-03 20:15:14,234 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-03 12:15:45] 2026-02-03 20:15:14,234 | INFO     | collected zombie processes
[2026-02-03 12:15:45] 2026-02-03 20:15:14,234 | INFO     | will attempt to kill all subprocesses of pid=3640394
[2026-02-03 12:15:45] 2026-02-03 20:15:14,435 | INFO     | process IDs to be killed: [3640394] (in reverse order)
[2026-02-03 12:15:45] 2026-02-03 20:15:14,530 | WARNING  | found no corresponding commands to process id(s)
[2026-02-03 12:15:45] 2026-02-03 20:15:14,530 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-03 12:15:45] 2026-02-03 20:15:14,536 | INFO     | did not find any defunct processes belonging to 3640394
[2026-02-03 12:15:45] 2026-02-03 20:15:14,542 | INFO     | did not find any defunct processes belonging to 3640394
[2026-02-03 12:15:45] 2026-02-03 20:15:14,542 | INFO     | ready for new job
[2026-02-03 12:15:45] 2026-02-03 20:15:14,543 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-03 12:15:45] 2026-02-03 20:15:14,544 | INFO     | **************************************
[2026-02-03 12:15:45] 2026-02-03 20:15:14,544 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-03 12:15:45] 2026-02-03 20:15:14,544 | INFO     | **************************************
[2026-02-03 12:15:45] 2026-02-03 20:15:14,544 | INFO     | 
[2026-02-03 12:15:45] 2026-02-03 20:15:14,545 | INFO     | architecture information:
[2026-02-03 12:15:45] 2026-02-03 20:15:14,546 | INFO     | executing command: cat /etc/os-release
[2026-02-03 12:15:45] 2026-02-03 20:15:14,556 | INFO     | cat /etc/os-release:
[2026-02-03 12:15:45] NAME="CentOS Linux"
[2026-02-03 12:15:45] VERSION="7 (Core)"
[2026-02-03 12:15:45] ID="centos"
[2026-02-03 12:15:45] ID_LIKE="rhel fedora"
[2026-02-03 12:15:45] VERSION_ID="7"
[2026-02-03 12:15:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-03 12:15:45] ANSI_COLOR="0;31"
[2026-02-03 12:15:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-03 12:15:45] HOME_URL="https://www.centos.org/"
[2026-02-03 12:15:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-03 12:15:45] 
[2026-02-03 12:15:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-03 12:15:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-03 12:15:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-03 12:15:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-03 12:15:45] 
[2026-02-03 12:15:45] 2026-02-03 20:15:14,556 | INFO     | **************************************
[2026-02-03 12:15:45] 2026-02-03 20:15:15,056 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-03 12:15:45] 2026-02-03 20:15:15,066 | INFO     | sufficient remaining disk space (1290876747776 B)
[2026-02-03 12:15:45] 2026-02-03 20:15:15,067 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-03 12:15:45] 2026-02-03 20:15:15,067 | INFO     | current server update state: UPDATING_FINAL
[2026-02-03 12:15:45] 2026-02-03 20:15:15,067 | INFO     | update_server=False
[2026-02-03 12:15:45] 2026-02-03 20:15:15,067 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-03 12:15:45] 2026-02-03 20:15:15,067 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-03 12:15:45] 2026-02-03 20:15:15,067 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-03 12:15:45] 2026-02-03 20:15:15,469 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-03 12:15:45] 2026-02-03 20:15:15,469 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-03 12:15:45] 2026-02-03 20:15:15,469 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-03 12:15:45] 2026-02-03 20:15:15,469 | INFO     | will abort loop
[2026-02-03 12:15:45] 2026-02-03 20:15:15,652 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-03 12:15:45] 2026-02-03 20:15:15,873 | INFO     | all job control threads have been joined
[2026-02-03 12:15:45] 2026-02-03 20:15:16,076 | INFO     | [job] retrieve thread has finished
[2026-02-03 12:15:45] 2026-02-03 20:15:16,077 | INFO     | [job] queue monitor thread has finished
[2026-02-03 12:15:45] 2026-02-03 20:15:16,129 | INFO     | all payload control threads have been joined
[2026-02-03 12:15:45] 2026-02-03 20:15:16,192 | INFO     | all data control threads have been joined
[2026-02-03 12:15:45] 2026-02-03 20:15:16,265 | INFO     | [payload] failed_post thread has finished
[2026-02-03 12:15:45] 2026-02-03 20:15:16,475 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-03 12:15:45] 2026-02-03 20:15:16,475 | INFO     | [job] job monitor thread has finished
[2026-02-03 12:15:45] 2026-02-03 20:15:16,664 | INFO     | [job] validate thread has finished
[2026-02-03 12:15:45] 2026-02-03 20:15:16,800 | INFO     | [job] create_data_payload thread has finished
[2026-02-03 12:15:45] 2026-02-03 20:15:16,879 | INFO     | [job] control thread has finished
[2026-02-03 12:15:45] 2026-02-03 20:15:16,961 | INFO     | [payload] validate_pre thread has finished
[2026-02-03 12:15:45] 2026-02-03 20:15:17,082 | INFO     | [data] copytool_out thread has finished
[2026-02-03 12:15:45] 2026-02-03 20:15:17,135 | INFO     | [payload] control thread has finished
[2026-02-03 12:15:45] 2026-02-03 20:15:17,194 | INFO     | [data] copytool_in thread has finished
[2026-02-03 12:15:45] 2026-02-03 20:15:17,212 | INFO     | [data] control thread has finished
[2026-02-03 12:15:45] 2026-02-03 20:15:17,357 | INFO     | [payload] validate_post thread has finished
[2026-02-03 12:15:45] 2026-02-03 20:15:17,445 | INFO     | [payload] execute_payloads thread has finished
[2026-02-03 12:15:45] 2026-02-03 20:15:19,673 | INFO     | [data] queue_monitor thread has finished
[2026-02-03 12:15:45] 2026-02-03 20:15:33,844 | INFO     | [monitor] cgroup control has ended
[2026-02-03 12:15:45] 2026-02-03 20:15:34,814 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139946108864320)>', '<ExcThread(monitor, started 139945192711936)>']
[2026-02-03 12:15:45] 2026-02-03 20:15:39,840 | INFO     | all workflow threads have been joined
[2026-02-03 12:15:45] 2026-02-03 20:15:39,840 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-03 12:15:45] 2026-02-03 20:15:39,840 | INFO     | traces error code: 0
[2026-02-03 12:15:45] 2026-02-03 20:15:39,841 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-03 12:15:45] 2026-02-03 20:15:44,825 | INFO     | PID=3635850 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-03 12:15:45] 2026-02-03 20:15:44,826 | INFO     | .. there are 26 such processes running
[2026-02-03 12:15:45] 2026-02-03 20:15:44,826 | INFO     | found 0 job(s) in 20 queues
[2026-02-03 12:15:45] 2026-02-03 20:15:44,827 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-03 12:15:45] 2026-02-03 20:15:44,827 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-03 12:15:45] 2026-02-03 20:15:44,827 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-03 12:15:45] 2026-02-03 20:15:44,827 | INFO     | [monitor] control thread has ended
[2026-02-03 12:15:45] 2026-02-03 20:15:44,947 [wrapper] ==== pilot stdout END ====
[2026-02-03 12:15:45] 2026-02-03 20:15:44,949 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-03 12:15:45] 2026-02-03 20:15:44,951 [wrapper] pilotpid: 3635850
[2026-02-03 12:15:45] 2026-02-03 20:15:44,952 [wrapper] Pilot exit status: 0
[2026-02-03 12:15:45] 2026-02-03 20:15:44,960 [wrapper] pandaids: 6999412782
[2026-02-03 12:15:45] 2026-02-03 20:15:44,998 [wrapper] cleanup supervisor_pilot 3635856 3635851
[2026-02-03 12:15:45] 2026-02-03 20:15:44,999 [wrapper] Test setup, not cleaning
[2026-02-03 12:15:45] 2026-02-03 20:15:45,001 [wrapper] apfmon messages muted
[2026-02-03 12:15:45] 2026-02-03 20:15:45,003 [wrapper] ==== wrapper stdout END ====
[2026-02-03 12:15:45] 2026-02-03 20:15:45,004 [wrapper] ==== wrapper stderr END ====
[2026-02-03 12:15:45]  *** Error codes and diagnostics ***
[2026-02-03 12:15:45]     "exeErrorCode": 65,
[2026-02-03 12:15:45]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-03 12:15:45]     "pilotErrorCode": 1305,
[2026-02-03 12:15:45]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-03 12:15:45]  *** Listing of results directory ***
[2026-02-03 12:15:45] total 487876
[2026-02-03 12:15:45] -rwx------. 1 boinc boinc     36322 Feb  3 07:13 runpilot2-wrapper.sh
[2026-02-03 12:15:45] -rw-r--r--. 1 boinc boinc      5111 Feb  3 07:16 queuedata.json
[2026-02-03 12:15:45] -rw-r--r--. 1 boinc boinc    584422 Feb  3 07:16 pilot3.tar.gz
[2026-02-03 12:15:45] -rw-r--r--. 1 boinc boinc       100 Feb  3 12:12 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-03 12:15:45] -rwxr-xr-x. 1 boinc boinc      7986 Feb  3 12:12 run_atlas
[2026-02-03 12:15:45] -rw-r--r--. 1 boinc boinc       105 Feb  3 12:12 job.xml
[2026-02-03 12:15:45] -rw-r--r--. 1 boinc boinc      6443 Feb  3 12:12 init_data.xml
[2026-02-03 12:15:45] -rw-r--r--. 2 boinc boinc 495446161 Feb  3 12:12 EVNT.48317889._000209.pool.root.1
[2026-02-03 12:15:45] -rw-r--r--. 2 boinc boinc     15845 Feb  3 12:12 start_atlas.sh
[2026-02-03 12:15:45] drwxrwx--x. 2 boinc boinc      4096 Feb  3 12:12 shared
[2026-02-03 12:15:45] -rw-r--r--. 2 boinc boinc    597747 Feb  3 12:12 input.tar.gz
[2026-02-03 12:15:45] -rw-r--r--. 1 boinc boinc         0 Feb  3 12:12 boinc_lockfile
[2026-02-03 12:15:45] -rw-r--r--. 1 boinc boinc      2522 Feb  3 12:12 pandaJob.out
[2026-02-03 12:15:45] -rw-------. 1 boinc boinc   1009252 Feb  3 12:12 agis_schedconf.cvmfs.json
[2026-02-03 12:15:45] -rw-------. 1 boinc boinc   1511668 Feb  3 12:12 agis_ddmendpoints.agis.ALL.json
[2026-02-03 12:15:45] -rw-------. 1 boinc boinc       442 Feb  3 12:12 workernode_map.json
[2026-02-03 12:15:45] drwx------. 5 boinc boinc      4096 Feb  3 12:12 pilot3
[2026-02-03 12:15:45] -rw-------. 1 boinc boinc       950 Feb  3 12:13 memory_monitor_summary.json
[2026-02-03 12:15:45] -rw-r--r--. 1 boinc boinc       522 Feb  3 12:13 boinc_task_state.xml
[2026-02-03 12:15:45] -rw-------. 1 boinc boinc     21053 Feb  3 12:13 log.48317892._011029.job.log.tgz.1
[2026-02-03 12:15:45] -rw-------. 1 boinc boinc      7002 Feb  3 12:15 heartbeat.json
[2026-02-03 12:15:45] -rw-r--r--. 1 boinc boinc        22 Feb  3 12:15 wrapper_checkpoint.txt
[2026-02-03 12:15:45] -rw-r--r--. 1 boinc boinc      8192 Feb  3 12:15 boinc_mmap_file
[2026-02-03 12:15:45] -rw-------. 1 boinc boinc        95 Feb  3 12:15 pilot_heartbeat.json
[2026-02-03 12:15:45] -rw-------. 1 boinc boinc       823 Feb  3 12:15 pilotlog.txt
[2026-02-03 12:15:45] -rw-------. 1 boinc boinc     81281 Feb  3 12:15 log.48317892._011029.job.log.1
[2026-02-03 12:15:45] -rw-------. 1 boinc boinc       188 Feb  3 12:15 output.list
[2026-02-03 12:15:45] -rw-r--r--. 1 boinc boinc       620 Feb  3 12:15 runtime_log
[2026-02-03 12:15:45] -rw-------. 1 boinc boinc    122880 Feb  3 12:15 result.tar.gz
[2026-02-03 12:15:45] -rw-------. 1 boinc boinc       646 Feb  3 12:15 x2FNDmKHX78n9Rq4apOajLDm4fhM0noT9bVooX4SDmCwUKDmq0y6on.diag
[2026-02-03 12:15:45] -rw-r--r--. 1 boinc boinc      8633 Feb  3 12:15 runtime_log.err
[2026-02-03 12:15:45] -rw-r--r--. 1 boinc boinc     21761 Feb  3 12:15 stderr.txt
[2026-02-03 12:15:45] No HITS result produced
[2026-02-03 12:15:45]  *** Contents of shared directory: ***
[2026-02-03 12:15:45] total 484560
[2026-02-03 12:15:45] -rw-r--r--. 2 boinc boinc 495446161 Feb  3 12:12 ATLAS.root_0
[2026-02-03 12:15:45] -rw-r--r--. 2 boinc boinc     15845 Feb  3 12:12 start_atlas.sh
[2026-02-03 12:15:45] -rw-r--r--. 2 boinc boinc    597747 Feb  3 12:12 input.tar.gz
[2026-02-03 12:15:45] -rw-------. 1 boinc boinc    122880 Feb  3 12:15 result.tar.gz
12:15:46 (3632185): run_atlas exited; CPU time 18.959413
12:15:46 (3632185): called boinc_finish(0)

</stderr_txt>
]]>

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