Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:11:56 (260432): wrapper (7.7.26015): starting
03:11:56 (260432): wrapper: running run_atlas (--nthreads 4)
[2026-02-04 03:11:56] Arguments: --nthreads 4
[2026-02-04 03:11:56] Threads: 4
[2026-02-04 03:11:56] Checking for CVMFS
[2026-02-04 03:11:56] No cvmfs_config command found, will try listing directly
[2026-02-04 03:11:56] CVMFS is ok
[2026-02-04 03:11:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-04 03:11:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-04 03:11:56] Further information can be found at the LHC@home message board.
[2026-02-04 03:11:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 03:11:56] Checking for apptainer binary...
[2026-02-04 03:11:56] which: no apptainer in ((null))
[2026-02-04 03:11:56] apptainer is not installed, using version from CVMFS
[2026-02-04 03:11:56] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 03:11:56] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot24/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut25.grid.cesnet.cz
[2026-02-04 03:11:56] apptainer works
[2026-02-04 03:11:56] Set ATHENA_PROC_NUMBER=4
[2026-02-04 03:11:56] Set ATHENA_CORE_NUMBER=4
[2026-02-04 03:11:56] Starting ATLAS job with PandaID=6999412866
[2026-02-04 03:11:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot24/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 06:48:40]  *** The last 200 lines of the pilot log: ***
[2026-02-04 06:48:40] 2026-02-04 05:48:05,867 | INFO     | log transfer has been attempted: DONE
[2026-02-04 06:48:40] 2026-02-04 05:48:05,867 | INFO     | job 6999412866 has finished - writing final server update
[2026-02-04 06:48:40] 2026-02-04 05:48:05,868 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_4036041/.job.ad'
[2026-02-04 06:48:40] 2026-02-04 05:48:05,868 | INFO     | total number of processed events: 400 (read)
[2026-02-04 06:48:40] 2026-02-04 05:48:05,876 | INFO     | using path: /scratch/boinc/var/slot24/slots/0/PanDA_Pilot-6999412866/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 06:48:40] 2026-02-04 05:48:05,877 | INFO     | extracted standard info from prmon json
[2026-02-04 06:48:40] 2026-02-04 05:48:05,877 | INFO     | extracted standard memory fields from prmon json
[2026-02-04 06:48:40] 2026-02-04 05:48:05,877 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-04 06:48:40] 2026-02-04 05:48:05,877 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-04 06:48:40] 2026-02-04 05:48:05,877 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-04 06:48:40] 2026-02-04 05:48:05,882 | INFO     | fitting pss+swap vs Time
[2026-02-04 06:48:40] 2026-02-04 05:48:05,882 | INFO     | sum of square deviations: 2954447953.0
[2026-02-04 06:48:40] 2026-02-04 05:48:05,884 | INFO     | sum of deviations: 27303508713.499992
[2026-02-04 06:48:40] 2026-02-04 05:48:05,884 | INFO     | mean x: 1770177590.5
[2026-02-04 06:48:40] 2026-02-04 05:48:05,884 | INFO     | mean y: 2317274.466981132
[2026-02-04 06:48:40] 2026-02-04 05:48:05,884 | INFO     | intersect: -16356765720.236622
[2026-02-04 06:48:40] 2026-02-04 05:48:05,885 | INFO     | chi2: 1.4056897439393021
[2026-02-04 06:48:40] 2026-02-04 05:48:05,885 | INFO     | sum of square deviations: 2750295288.0
[2026-02-04 06:48:40] 2026-02-04 05:48:05,887 | INFO     | sum of deviations: 26414440637.0
[2026-02-04 06:48:40] 2026-02-04 05:48:05,887 | INFO     | mean x: 1770177438.0
[2026-02-04 06:48:40] 2026-02-04 05:48:05,887 | INFO     | mean y: 2316610.217391304
[2026-02-04 06:48:40] 2026-02-04 05:48:05,887 | INFO     | intersect: -16998856702.70716
[2026-02-04 06:48:40] 2026-02-04 05:48:05,888 | INFO     | chi2: 1.4064913117287778
[2026-02-04 06:48:40] 2026-02-04 05:48:05,888 | INFO     | current chi2=1.4064913117287778 (change=-0.05702309438705857 %)
[2026-02-04 06:48:40] 2026-02-04 05:48:05,888 | INFO     | right removable region: 206
[2026-02-04 06:48:40] 2026-02-04 05:48:05,888 | INFO     | sum of square deviations: 2750295288.0
[2026-02-04 06:48:40] 2026-02-04 05:48:05,890 | INFO     | sum of deviations: -2208904976.999997
[2026-02-04 06:48:40] 2026-02-04 05:48:05,890 | INFO     | mean x: 1770177743.0
[2026-02-04 06:48:40] 2026-02-04 05:48:05,890 | INFO     | mean y: 2339083.7922705314
[2026-02-04 06:48:40] 2026-02-04 05:48:05,890 | INFO     | intersect: 1424060759.9148242
[2026-02-04 06:48:40] 2026-02-04 05:48:05,891 | INFO     | chi2: 0.012196723640345415
[2026-02-04 06:48:40] 2026-02-04 05:48:05,891 | INFO     | current chi2=0.012196723640345415 (change=99.13233174724849 %)
[2026-02-04 06:48:40] 2026-02-04 05:48:05,891 | INFO     | sum of square deviations: 2555770710.5
[2026-02-04 06:48:40] 2026-02-04 05:48:05,893 | INFO     | sum of deviations: -3020458950.5000005
[2026-02-04 06:48:40] 2026-02-04 05:48:05,893 | INFO     | mean x: 1770177895.5
[2026-02-04 06:48:40] 2026-02-04 05:48:05,893 | INFO     | mean y: 2339705.0247524753
[2026-02-04 06:48:40] 2026-02-04 05:48:05,893 | INFO     | intersect: 2094369966.7669
[2026-02-04 06:48:40] 2026-02-04 05:48:05,894 | INFO     | chi2: 0.008216718139776686
[2026-02-04 06:48:40] 2026-02-04 05:48:05,894 | INFO     | current chi2=0.008216718139776686 (change=32.631759298073376 %)
[2026-02-04 06:48:40] 2026-02-04 05:48:05,894 | INFO     | sum of square deviations: 2370641658.0
[2026-02-04 06:48:40] 2026-02-04 05:48:05,896 | INFO     | sum of deviations: -2552527492.9999995
[2026-02-04 06:48:40] 2026-02-04 05:48:05,896 | INFO     | mean x: 1770178048.0
[2026-02-04 06:48:40] 2026-02-04 05:48:05,896 | INFO     | mean y: 2339317.847715736
[2026-02-04 06:48:40] 2026-02-04 05:48:05,896 | INFO     | intersect: 1908333047.3416371
[2026-02-04 06:48:40] 2026-02-04 05:48:05,897 | INFO     | chi2: 0.00813104624341
[2026-02-04 06:48:40] 2026-02-04 05:48:05,897 | INFO     | current chi2=0.00813104624341 (change=1.0426534646716608 %)
[2026-02-04 06:48:40] 2026-02-04 05:48:05,897 | INFO     | left removable region: 30
[2026-02-04 06:48:40] 2026-02-04 05:48:05,897 | INFO     | sum of square deviations: 1690450300.0
[2026-02-04 06:48:40] 2026-02-04 05:48:05,898 | INFO     | sum of deviations: 345068124.49999964
[2026-02-04 06:48:40] 2026-02-04 05:48:05,899 | INFO     | mean x: 1770178322.5
[2026-02-04 06:48:40] 2026-02-04 05:48:05,899 | INFO     | mean y: 2336101.835227273
[2026-02-04 06:48:40] 2026-02-04 05:48:05,899 | INFO     | intersect: -359006739.0490215
[2026-02-04 06:48:40] 2026-02-04 05:48:05,899 | INFO     | chi2: 0.004683115629721637
[2026-02-04 06:48:40] 2026-02-04 05:48:05,900 | INFO     | current memory leak: 0.20 B/s (using 176 data points, chi2=0.00)
[2026-02-04 06:48:40] 2026-02-04 05:48:05,900 | INFO     | could have reported an average CPU frequency of 2480 MHz (11 samples)
[2026-02-04 06:48:40] 2026-02-04 05:48:05,900 | INFO     | ..............................
[2026-02-04 06:48:40] 2026-02-04 05:48:05,900 | INFO     | . Timing measurements:
[2026-02-04 06:48:40] 2026-02-04 05:48:05,900 | INFO     | . get job = 0 s
[2026-02-04 06:48:40] 2026-02-04 05:48:05,901 | INFO     | . initial setup = 5 s
[2026-02-04 06:48:40] 2026-02-04 05:48:05,901 | INFO     | . payload setup = 5 s
[2026-02-04 06:48:40] 2026-02-04 05:48:05,901 | INFO     | . stage-in = 0 s
[2026-02-04 06:48:40] 2026-02-04 05:48:05,901 | INFO     | . payload execution = 12927 s
[2026-02-04 06:48:40] 2026-02-04 05:48:05,901 | INFO     | . stage-out = 1 s
[2026-02-04 06:48:40] 2026-02-04 05:48:05,901 | INFO     | . log creation = 0 s
[2026-02-04 06:48:40] 2026-02-04 05:48:05,901 | INFO     | ..............................
[2026-02-04 06:48:40] 2026-02-04 05:48:06,007 | INFO     | 
[2026-02-04 06:48:40] 2026-02-04 05:48:06,008 | INFO     | job summary report
[2026-02-04 06:48:40] 2026-02-04 05:48:06,008 | INFO     | --------------------------------------------------
[2026-02-04 06:48:40] 2026-02-04 05:48:06,008 | INFO     | PanDA job id: 6999412866
[2026-02-04 06:48:40] 2026-02-04 05:48:06,008 | INFO     | task id: 48317931
[2026-02-04 06:48:40] 2026-02-04 05:48:06,008 | INFO     | errors: (none)
[2026-02-04 06:48:40] 2026-02-04 05:48:06,008 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 06:48:40] 2026-02-04 05:48:06,009 | INFO     | pilot state: finished 
[2026-02-04 06:48:40] 2026-02-04 05:48:06,009 | INFO     | transexitcode: 0
[2026-02-04 06:48:40] 2026-02-04 05:48:06,009 | INFO     | exeerrorcode: 0
[2026-02-04 06:48:40] 2026-02-04 05:48:06,009 | INFO     | exeerrordiag: 
[2026-02-04 06:48:40] 2026-02-04 05:48:06,009 | INFO     | exitcode: 0
[2026-02-04 06:48:40] 2026-02-04 05:48:06,009 | INFO     | exitmsg: OK
[2026-02-04 06:48:40] 2026-02-04 05:48:06,009 | INFO     | cpuconsumptiontime: 49376 s
[2026-02-04 06:48:40] 2026-02-04 05:48:06,009 | INFO     | nevents: 400
[2026-02-04 06:48:40] 2026-02-04 05:48:06,010 | INFO     | neventsw: 0
[2026-02-04 06:48:40] 2026-02-04 05:48:06,010 | INFO     | pid: 269135
[2026-02-04 06:48:40] 2026-02-04 05:48:06,010 | INFO     | pgrp: 269135
[2026-02-04 06:48:40] 2026-02-04 05:48:06,010 | INFO     | corecount: 4
[2026-02-04 06:48:40] 2026-02-04 05:48:06,010 | INFO     | event service: False
[2026-02-04 06:48:40] 2026-02-04 05:48:06,010 | INFO     | sizes: {0: 2277791, 1: 2278252, 11: 2278252, 12936: 2308330, 12937: 2308329, 12938: 2317405, 12941: 2317783}
[2026-02-04 06:48:40] 2026-02-04 05:48:06,010 | INFO     | --------------------------------------------------
[2026-02-04 06:48:40] 2026-02-04 05:48:06,011 | INFO     | 
[2026-02-04 06:48:40] 2026-02-04 05:48:06,011 | INFO     | executing command: ls -lF /scratch/boinc/var/slot24/slots/0
[2026-02-04 06:48:40] 2026-02-04 05:48:06,032 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 06:48:40] 2026-02-04 05:48:06,033 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 06:48:40] 2026-02-04 05:48:06,033 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 06:48:40] 2026-02-04 05:48:06,033 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 06:48:40] 2026-02-04 05:48:06,033 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 06:48:40] 2026-02-04 05:48:06,033 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 06:48:40] 2026-02-04 05:48:06,033 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 06:48:40] 2026-02-04 05:48:06,033 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 06:48:40] 2026-02-04 05:48:06,034 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 06:48:40] 2026-02-04 05:48:06,034 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 06:48:40] 2026-02-04 05:48:06,034 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 06:48:40] 2026-02-04 05:48:06,034 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 06:48:40] 2026-02-04 05:48:06,034 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 06:48:40] 2026-02-04 05:48:06,034 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 06:48:40] 2026-02-04 05:48:06,034 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 06:48:40] 2026-02-04 05:48:06,035 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 06:48:40] 2026-02-04 05:48:06,035 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 06:48:40] 2026-02-04 05:48:06,035 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 06:48:40] 2026-02-04 05:48:06,035 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 06:48:40] 2026-02-04 05:48:06,035 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 06:48:40] 2026-02-04 05:48:06,035 | INFO     | job 6999412866 has completed (purged errors)
[2026-02-04 06:48:40] 2026-02-04 05:48:06,036 | INFO     | overall cleanup function is called
[2026-02-04 06:48:40] 2026-02-04 05:48:07,043 | INFO     | --- collectZombieJob: --- 10, [269135]
[2026-02-04 06:48:40] 2026-02-04 05:48:07,044 | INFO     | zombie collector waiting for pid 269135
[2026-02-04 06:48:40] 2026-02-04 05:48:07,044 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 06:48:40] 2026-02-04 05:48:07,044 | INFO     | collected zombie processes
[2026-02-04 06:48:40] 2026-02-04 05:48:07,044 | INFO     | will attempt to kill all subprocesses of pid=269135
[2026-02-04 06:48:40] 2026-02-04 05:48:07,335 | INFO     | process IDs to be killed: [269135] (in reverse order)
[2026-02-04 06:48:40] 2026-02-04 05:48:07,416 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 06:48:40] 2026-02-04 05:48:07,416 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 06:48:40] 2026-02-04 05:48:07,424 | INFO     | did not find any defunct processes belonging to 269135
[2026-02-04 06:48:40] 2026-02-04 05:48:07,431 | INFO     | did not find any defunct processes belonging to 269135
[2026-02-04 06:48:40] 2026-02-04 05:48:07,431 | INFO     | ready for new job
[2026-02-04 06:48:40] 2026-02-04 05:48:07,432 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 06:48:40] 2026-02-04 05:48:07,434 | INFO     | **************************************
[2026-02-04 06:48:40] 2026-02-04 05:48:07,434 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 06:48:40] 2026-02-04 05:48:07,434 | INFO     | **************************************
[2026-02-04 06:48:40] 2026-02-04 05:48:07,434 | INFO     | 
[2026-02-04 06:48:40] 2026-02-04 05:48:07,437 | INFO     | architecture information:
[2026-02-04 06:48:40] 2026-02-04 05:48:07,437 | INFO     | executing command: cat /etc/os-release
[2026-02-04 06:48:40] 2026-02-04 05:48:07,452 | INFO     | cat /etc/os-release:
[2026-02-04 06:48:40] NAME="CentOS Linux"
[2026-02-04 06:48:40] VERSION="7 (Core)"
[2026-02-04 06:48:40] ID="centos"
[2026-02-04 06:48:40] ID_LIKE="rhel fedora"
[2026-02-04 06:48:40] VERSION_ID="7"
[2026-02-04 06:48:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 06:48:40] ANSI_COLOR="0;31"
[2026-02-04 06:48:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 06:48:40] HOME_URL="https://www.centos.org/"
[2026-02-04 06:48:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 06:48:40] 
[2026-02-04 06:48:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 06:48:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 06:48:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 06:48:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 06:48:40] 
[2026-02-04 06:48:40] 2026-02-04 05:48:07,452 | INFO     | **************************************
[2026-02-04 06:48:40] 2026-02-04 05:48:07,955 | INFO     | executing command: df -mP /scratch/boinc/var/slot24/slots/0
[2026-02-04 06:48:40] 2026-02-04 05:48:07,970 | INFO     | sufficient remaining disk space (1662788829184 B)
[2026-02-04 06:48:40] 2026-02-04 05:48:07,970 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 06:48:40] 2026-02-04 05:48:07,971 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 06:48:40] 2026-02-04 05:48:07,971 | INFO     | update_server=False
[2026-02-04 06:48:40] 2026-02-04 05:48:07,971 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 06:48:40] 2026-02-04 05:48:07,971 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 06:48:40] 2026-02-04 05:48:07,971 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 06:48:40] 2026-02-04 05:48:08,373 | INFO     | all job control threads have been joined
[2026-02-04 06:48:40] 2026-02-04 05:48:08,725 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 06:48:40] 2026-02-04 05:48:08,726 | INFO     | aborting loop
[2026-02-04 06:48:40] 2026-02-04 05:48:08,763 | INFO     | all data control threads have been joined
[2026-02-04 06:48:40] 2026-02-04 05:48:08,901 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 06:48:40] 2026-02-04 05:48:08,975 | INFO     | [job] queue monitor thread has finished
[2026-02-04 06:48:40] 2026-02-04 05:48:08,975 | INFO     | [job] retrieve thread has finished
[2026-02-04 06:48:40] 2026-02-04 05:48:09,070 | INFO     | [payload] validate_post thread has finished
[2026-02-04 06:48:40] 2026-02-04 05:48:09,221 | INFO     | [data] copytool_in thread has finished
[2026-02-04 06:48:40] 2026-02-04 05:48:09,378 | INFO     | [job] control thread has finished
[2026-02-04 06:48:40] 2026-02-04 05:48:09,450 | INFO     | all payload control threads have been joined
[2026-02-04 06:48:40] 2026-02-04 05:48:09,493 | INFO     | [job] validate thread has finished
[2026-02-04 06:48:40] 2026-02-04 05:48:09,535 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 06:48:40] 2026-02-04 05:48:09,727 | INFO     | [job] job monitor thread has finished
[2026-02-04 06:48:40] 2026-02-04 05:48:09,742 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 06:48:40] 2026-02-04 05:48:09,768 | INFO     | [data] control thread has finished
[2026-02-04 06:48:40] 2026-02-04 05:48:10,097 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 06:48:40] 2026-02-04 05:48:10,196 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 06:48:40] 2026-02-04 05:48:10,310 | INFO     | [payload] failed_post thread has finished
[2026-02-04 06:48:40] 2026-02-04 05:48:10,455 | INFO     | [payload] control thread has finished
[2026-02-04 06:48:40] 2026-02-04 05:48:10,903 | INFO     | [data] copytool_out thread has finished
[2026-02-04 06:48:40] 2026-02-04 05:48:11,976 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 06:48:40] 2026-02-04 05:48:33,102 | INFO     | [monitor] cgroup control has ended
[2026-02-04 06:48:40] 2026-02-04 05:48:34,996 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22584540694336)>', '<ExcThread(monitor, started 22584296212224)>']
[2026-02-04 06:48:40] 2026-02-04 05:48:37,920 | INFO     | PID=264540 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-04 06:48:40] 2026-02-04 05:48:37,920 | INFO     | .. there are 6 such processes running
[2026-02-04 06:48:40] 2026-02-04 05:48:37,921 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 06:48:40] 2026-02-04 05:48:37,921 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 06:48:40] 2026-02-04 05:48:37,921 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 06:48:40] 2026-02-04 05:48:37,921 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 06:48:40] 2026-02-04 05:48:37,922 | INFO     | [monitor] control thread has ended
[2026-02-04 06:48:40] 2026-02-04 05:48:40,021 | INFO     | all workflow threads have been joined
[2026-02-04 06:48:40] 2026-02-04 05:48:40,022 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 06:48:40] 2026-02-04 05:48:40,022 | INFO     | traces error code: 0
[2026-02-04 06:48:40] 2026-02-04 05:48:40,022 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 06:48:40] 2026-02-04 05:48:40,137 [wrapper] ==== pilot stdout END ====
[2026-02-04 06:48:40] 2026-02-04 05:48:40,140 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 06:48:40] 2026-02-04 05:48:40,143 [wrapper] pilotpid: 264540
[2026-02-04 06:48:40] 2026-02-04 05:48:40,145 [wrapper] Pilot exit status: 0
[2026-02-04 06:48:40] 2026-02-04 05:48:40,155 [wrapper] pandaids: 6999412866
[2026-02-04 06:48:40] 2026-02-04 05:48:40,201 [wrapper] cleanup supervisor_pilot  422767 264541
[2026-02-04 06:48:40] 2026-02-04 05:48:40,203 [wrapper] Test setup, not cleaning
[2026-02-04 06:48:40] 2026-02-04 05:48:40,206 [wrapper] apfmon messages muted
[2026-02-04 06:48:40] 2026-02-04 05:48:40,208 [wrapper] ==== wrapper stdout END ====
[2026-02-04 06:48:40] 2026-02-04 05:48:40,210 [wrapper] ==== wrapper stderr END ====
[2026-02-04 06:48:40]  *** Error codes and diagnostics ***
[2026-02-04 06:48:40]     "exeErrorCode": 0,
[2026-02-04 06:48:40]     "exeErrorDiag": "",
[2026-02-04 06:48:40]     "pilotErrorCode": 0,
[2026-02-04 06:48:40]     "pilotErrorDiag": "",
[2026-02-04 06:48:40]  *** Listing of results directory ***
[2026-02-04 06:48:40] total 676556
[2026-02-04 06:48:40] -rw-r--r-- 1 boinc boinc    584422 Feb  3 16:10 pilot3.tar.gz
[2026-02-04 06:48:40] -rwx------ 1 boinc boinc     36322 Feb  3 16:10 runpilot2-wrapper.sh
[2026-02-04 06:48:40] -rw-r--r-- 1 boinc boinc      5111 Feb  3 16:11 queuedata.json
[2026-02-04 06:48:40] -rw-r--r-- 1 boinc boinc       100 Feb  4 03:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 06:48:40] -rwxr-xr-x 1 boinc boinc      7986 Feb  4 03:11 run_atlas
[2026-02-04 06:48:40] -rw-r--r-- 1 boinc boinc       105 Feb  4 03:11 job.xml
[2026-02-04 06:48:40] -rw-r--r-- 1 boinc boinc      6423 Feb  4 03:11 init_data.xml
[2026-02-04 06:48:40] -rw-r--r-- 2 boinc boinc 492352714 Feb  4 03:11 EVNT.48317929._000294.pool.root.1
[2026-02-04 06:48:40] -rw-r--r-- 2 boinc boinc     15845 Feb  4 03:11 start_atlas.sh
[2026-02-04 06:48:40] drwxrwx--x 2 boinc boinc      4096 Feb  4 03:11 shared
[2026-02-04 06:48:40] -rw-r--r-- 2 boinc boinc    597758 Feb  4 03:11 input.tar.gz
[2026-02-04 06:48:40] -rw-r--r-- 1 boinc boinc         0 Feb  4 03:11 boinc_lockfile
[2026-02-04 06:48:40] -rw-r--r-- 1 boinc boinc      2512 Feb  4 03:11 pandaJob.out
[2026-02-04 06:48:40] -rw------- 1 boinc boinc   1009228 Feb  4 03:12 agis_schedconf.cvmfs.json
[2026-02-04 06:48:40] -rw------- 1 boinc boinc       447 Feb  4 03:12 workernode_map.json
[2026-02-04 06:48:40] drwx------ 5 boinc boinc      4096 Feb  4 03:12 pilot3
[2026-02-04 06:48:40] -rw------- 1 boinc boinc 192049464 Feb  4 06:47 HITS.48317931._016148.pool.root.1
[2026-02-04 06:48:40] -rw-r--r-- 1 boinc boinc       532 Feb  4 06:47 boinc_task_state.xml
[2026-02-04 06:48:40] -rw------- 1 boinc boinc      1038 Feb  4 06:47 memory_monitor_summary.json
[2026-02-04 06:48:40] -rw------- 1 boinc boinc   1511668 Feb  4 06:48 agis_ddmendpoints.agis.ALL.json
[2026-02-04 06:48:40] -rw------- 1 boinc boinc    388674 Feb  4 06:48 log.48317931._016148.job.log.tgz.1
[2026-02-04 06:48:40] -rw------- 1 boinc boinc      6418 Feb  4 06:48 heartbeat.json
[2026-02-04 06:48:40] -rw-r--r-- 1 boinc boinc      8192 Feb  4 06:48 boinc_mmap_file
[2026-02-04 06:48:40] -rw-r--r-- 1 boinc boinc        28 Feb  4 06:48 wrapper_checkpoint.txt
[2026-02-04 06:48:40] -rw------- 1 boinc boinc        95 Feb  4 06:48 pilot_heartbeat.json
[2026-02-04 06:48:40] -rw------- 1 boinc boinc      4829 Feb  4 06:48 pilotlog.txt
[2026-02-04 06:48:40] -rw------- 1 boinc boinc   1832921 Feb  4 06:48 log.48317931._016148.job.log.1
[2026-02-04 06:48:40] -rw------- 1 boinc boinc       357 Feb  4 06:48 output.list
[2026-02-04 06:48:40] -rw-r--r-- 1 boinc boinc       620 Feb  4 06:48 runtime_log
[2026-02-04 06:48:40] -rw------- 1 boinc boinc   2242560 Feb  4 06:48 result.tar.gz
[2026-02-04 06:48:40] -rw-r--r-- 1 boinc boinc      9205 Feb  4 06:48 runtime_log.err
[2026-02-04 06:48:40] -rw------- 1 boinc boinc       665 Feb  4 06:48 GRyKDmOEX78nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmcGVKDmJiApLo.diag
[2026-02-04 06:48:40] -rw-r--r-- 1 boinc boinc     20899 Feb  4 06:48 stderr.txt
[2026-02-04 06:48:40] HITS file was successfully produced:
[2026-02-04 06:48:40] -rw------- 1 boinc boinc 192049464 Feb  4 06:47 shared/HITS.pool.root.1
[2026-02-04 06:48:40]  *** Contents of shared directory: ***
[2026-02-04 06:48:40] total 671168
[2026-02-04 06:48:40] -rw-r--r-- 2 boinc boinc 492352714 Feb  4 03:11 ATLAS.root_0
[2026-02-04 06:48:40] -rw-r--r-- 2 boinc boinc     15845 Feb  4 03:11 start_atlas.sh
[2026-02-04 06:48:40] -rw-r--r-- 2 boinc boinc    597758 Feb  4 03:11 input.tar.gz
[2026-02-04 06:48:40] -rw------- 1 boinc boinc 192049464 Feb  4 06:47 HITS.pool.root.1
[2026-02-04 06:48:40] -rw------- 1 boinc boinc   2242560 Feb  4 06:48 result.tar.gz
06:48:41 (260432): run_atlas exited; CPU time 49819.286862
06:48:41 (260432): called boinc_finish(0)

</stderr_txt>
]]>

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