Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:21:16 (2698487): wrapper (7.7.26015): starting
07:21:16 (2698487): wrapper: running run_atlas (--nthreads 4)
[2026-02-04 07:21:16] Arguments: --nthreads 4
[2026-02-04 07:21:16] Threads: 4
[2026-02-04 07:21:16] Checking for CVMFS
[2026-02-04 07:21:16] No cvmfs_config command found, will try listing directly
[2026-02-04 07:21:16] CVMFS is ok
[2026-02-04 07:21:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-04 07:21:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-04 07:21:16] Further information can be found at the LHC@home message board.
[2026-02-04 07:21:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 07:21:16] Checking for apptainer binary...
[2026-02-04 07:21:16] which: no apptainer in ((null))
[2026-02-04 07:21:16] apptainer is not installed, using version from CVMFS
[2026-02-04 07:21:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 07:21:16] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot84/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2026-02-04 07:21:16] apptainer works
[2026-02-04 07:21:16] Set ATHENA_PROC_NUMBER=4
[2026-02-04 07:21:16] Set ATHENA_CORE_NUMBER=4
[2026-02-04 07:21:16] Starting ATLAS job with PandaID=6999412850
[2026-02-04 07:21:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot84/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 10:19:32]  *** The last 200 lines of the pilot log: ***
[2026-02-04 10:19:32] 2026-02-04 09:17:51,964 | INFO     | job 6999412850 has state=finished
[2026-02-04 10:19:32] 2026-02-04 09:17:51,964 | INFO     | preparing for final server update for job 6999412850 in state='finished'
[2026-02-04 10:19:32] 2026-02-04 09:17:51,964 | INFO     | reading metadata from: /scratch/boinc/var/slot84/slots/0/PanDA_Pilot-6999412850/jobReport.json
[2026-02-04 10:19:32] 2026-02-04 09:17:51,967 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot84/slots/0/workernode_map.json
[2026-02-04 10:19:32] 2026-02-04 09:17:51,967 | INFO     | this job has now completed (state=finished)
[2026-02-04 10:19:32] 2026-02-04 09:17:51,967 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-04 10:19:32] 2026-02-04 09:17:51,967 | INFO     | log transfer has been attempted: DONE
[2026-02-04 10:19:32] 2026-02-04 09:17:51,967 | INFO     | job 6999412850 has finished - writing final server update
[2026-02-04 10:19:32] 2026-02-04 09:17:51,968 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1260158/.job.ad'
[2026-02-04 10:19:32] 2026-02-04 09:17:51,968 | INFO     | total number of processed events: 400 (read)
[2026-02-04 10:19:32] 2026-02-04 09:17:51,992 | INFO     | using path: /scratch/boinc/var/slot84/slots/0/PanDA_Pilot-6999412850/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 10:19:32] 2026-02-04 09:17:51,992 | INFO     | extracted standard info from prmon json
[2026-02-04 10:19:32] 2026-02-04 09:17:51,992 | INFO     | extracted standard memory fields from prmon json
[2026-02-04 10:19:32] 2026-02-04 09:17:51,992 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-04 10:19:32] 2026-02-04 09:17:51,993 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-04 10:19:32] 2026-02-04 09:17:51,993 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-04 10:19:32] 2026-02-04 09:17:51,996 | INFO     | fitting pss+swap vs Time
[2026-02-04 10:19:32] 2026-02-04 09:17:51,996 | INFO     | sum of square deviations: 1605470102.0
[2026-02-04 10:19:32] 2026-02-04 09:17:51,997 | INFO     | sum of deviations: 19478318456.0
[2026-02-04 10:19:32] 2026-02-04 09:17:51,997 | INFO     | mean x: 1770191368.0
[2026-02-04 10:19:32] 2026-02-04 09:17:51,998 | INFO     | mean y: 2316911.583815029
[2026-02-04 10:19:32] 2026-02-04 09:17:51,998 | INFO     | intersect: -21474477424.86175
[2026-02-04 10:19:32] 2026-02-04 09:17:51,998 | INFO     | chi2: 1.1688457969983843
[2026-02-04 10:19:32] 2026-02-04 09:17:51,998 | INFO     | sum of square deviations: 1470248962.0
[2026-02-04 10:19:32] 2026-02-04 09:17:51,999 | INFO     | sum of deviations: 18773582741.5
[2026-02-04 10:19:32] 2026-02-04 09:17:51,999 | INFO     | mean x: 1770191215.5
[2026-02-04 10:19:32] 2026-02-04 09:17:51,999 | INFO     | mean y: 2316116.875
[2026-02-04 10:19:32] 2026-02-04 09:17:52,000 | INFO     | intersect: -22601223903.48905
[2026-02-04 10:19:32] 2026-02-04 09:17:52,000 | INFO     | chi2: 1.1696370958229385
[2026-02-04 10:19:32] 2026-02-04 09:17:52,000 | INFO     | current chi2=1.1696370958229385 (change=-0.06769916327596567 %)
[2026-02-04 10:19:32] 2026-02-04 09:17:52,000 | INFO     | right removable region: 167
[2026-02-04 10:19:32] 2026-02-04 09:17:52,000 | INFO     | sum of square deviations: 1470248962.0
[2026-02-04 10:19:32] 2026-02-04 09:17:52,001 | INFO     | sum of deviations: 17363467.00000012
[2026-02-04 10:19:32] 2026-02-04 09:17:52,001 | INFO     | mean x: 1770191520.5
[2026-02-04 10:19:32] 2026-02-04 09:17:52,001 | INFO     | mean y: 2338515.714285714
[2026-02-04 10:19:32] 2026-02-04 09:17:52,002 | INFO     | intersect: -18567237.559003647
[2026-02-04 10:19:32] 2026-02-04 09:17:52,002 | INFO     | chi2: 0.001801099250609548
[2026-02-04 10:19:32] 2026-02-04 09:17:52,002 | INFO     | current chi2=0.001801099250609548 (change=99.84590788149859 %)
[2026-02-04 10:19:32] 2026-02-04 09:17:52,002 | INFO     | sum of square deviations: 1342841922.0
[2026-02-04 10:19:32] 2026-02-04 09:17:52,003 | INFO     | sum of deviations: -38623431.0
[2026-02-04 10:19:32] 2026-02-04 09:17:52,003 | INFO     | mean x: 1770191673.0
[2026-02-04 10:19:32] 2026-02-04 09:17:52,003 | INFO     | mean y: 2338579.079754601
[2026-02-04 10:19:32] 2026-02-04 09:17:52,003 | INFO     | intersect: 53253638.26785318
[2026-02-04 10:19:32] 2026-02-04 09:17:52,004 | INFO     | chi2: 0.0017290965545706436
[2026-02-04 10:19:32] 2026-02-04 09:17:52,004 | INFO     | current chi2=0.0017290965545706436 (change=3.9977084002748073 %)
[2026-02-04 10:19:32] 2026-02-04 09:17:52,004 | INFO     | left removable region: 20
[2026-02-04 10:19:32] 2026-02-04 09:17:52,004 | INFO     | sum of square deviations: 984941258.0
[2026-02-04 10:19:32] 2026-02-04 09:17:52,005 | INFO     | sum of deviations: 289639223.99999994
[2026-02-04 10:19:32] 2026-02-04 09:17:52,005 | INFO     | mean x: 1770191795.0
[2026-02-04 10:19:32] 2026-02-04 09:17:52,005 | INFO     | mean y: 2337706.7210884355
[2026-02-04 10:19:32] 2026-02-04 09:17:52,005 | INFO     | intersect: -518218188.029507
[2026-02-04 10:19:32] 2026-02-04 09:17:52,005 | INFO     | chi2: 0.0014798558833934688
[2026-02-04 10:19:32] 2026-02-04 09:17:52,006 | INFO     | current memory leak: 0.29 B/s (using 147 data points, chi2=0.00)
[2026-02-04 10:19:32] 2026-02-04 09:17:52,006 | INFO     | could have reported an average CPU frequency of 2745 MHz (9 samples)
[2026-02-04 10:19:32] 2026-02-04 09:17:52,006 | INFO     | ..............................
[2026-02-04 10:19:32] 2026-02-04 09:17:52,006 | INFO     | . Timing measurements:
[2026-02-04 10:19:32] 2026-02-04 09:17:52,006 | INFO     | . get job = 0 s
[2026-02-04 10:19:32] 2026-02-04 09:17:52,006 | INFO     | . initial setup = 7 s
[2026-02-04 10:19:32] 2026-02-04 09:17:52,006 | INFO     | . payload setup = 8 s
[2026-02-04 10:19:32] 2026-02-04 09:17:52,007 | INFO     | . stage-in = 0 s
[2026-02-04 10:19:32] 2026-02-04 09:17:52,007 | INFO     | . payload execution = 10547 s
[2026-02-04 10:19:32] 2026-02-04 09:17:52,007 | INFO     | . stage-out = 0 s
[2026-02-04 10:19:32] 2026-02-04 09:17:52,007 | INFO     | . log creation = 0 s
[2026-02-04 10:19:32] 2026-02-04 09:17:52,007 | INFO     | ..............................
[2026-02-04 10:19:32] 2026-02-04 09:17:52,097 | INFO     | 
[2026-02-04 10:19:32] 2026-02-04 09:17:52,097 | INFO     | job summary report
[2026-02-04 10:19:32] 2026-02-04 09:17:52,097 | INFO     | --------------------------------------------------
[2026-02-04 10:19:32] 2026-02-04 09:17:52,097 | INFO     | PanDA job id: 6999412850
[2026-02-04 10:19:32] 2026-02-04 09:17:52,097 | INFO     | task id: 48317892
[2026-02-04 10:19:32] 2026-02-04 09:17:52,097 | INFO     | errors: (none)
[2026-02-04 10:19:32] 2026-02-04 09:17:52,097 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 10:19:32] 2026-02-04 09:17:52,097 | INFO     | pilot state: finished 
[2026-02-04 10:19:32] 2026-02-04 09:17:52,097 | INFO     | transexitcode: 0
[2026-02-04 10:19:32] 2026-02-04 09:17:52,097 | INFO     | exeerrorcode: 0
[2026-02-04 10:19:32] 2026-02-04 09:17:52,098 | INFO     | exeerrordiag: 
[2026-02-04 10:19:32] 2026-02-04 09:17:52,098 | INFO     | exitcode: 0
[2026-02-04 10:19:32] 2026-02-04 09:17:52,098 | INFO     | exitmsg: OK
[2026-02-04 10:19:32] 2026-02-04 09:17:52,098 | INFO     | cpuconsumptiontime: 40985 s
[2026-02-04 10:19:32] 2026-02-04 09:17:52,098 | INFO     | nevents: 400
[2026-02-04 10:19:32] 2026-02-04 09:17:52,098 | INFO     | neventsw: 0
[2026-02-04 10:19:32] 2026-02-04 09:17:52,098 | INFO     | pid: 2707643
[2026-02-04 10:19:32] 2026-02-04 09:17:52,098 | INFO     | pgrp: 2707643
[2026-02-04 10:19:32] 2026-02-04 09:17:52,098 | INFO     | corecount: 4
[2026-02-04 10:19:32] 2026-02-04 09:17:52,098 | INFO     | event service: False
[2026-02-04 10:19:32] 2026-02-04 09:17:52,098 | INFO     | sizes: {0: 2277974, 1: 2278264, 11: 2278264, 10559: 2307590, 10560: 2316610, 10564: 2316666, 10565: 2317052}
[2026-02-04 10:19:32] 2026-02-04 09:17:52,098 | INFO     | --------------------------------------------------
[2026-02-04 10:19:32] 2026-02-04 09:17:52,098 | INFO     | 
[2026-02-04 10:19:32] 2026-02-04 09:17:52,099 | INFO     | executing command: ls -lF /scratch/boinc/var/slot84/slots/0
[2026-02-04 10:19:32] 2026-02-04 09:17:52,135 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 10:19:32] 2026-02-04 09:17:52,135 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 10:19:32] 2026-02-04 09:17:52,135 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 10:19:32] 2026-02-04 09:17:52,136 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 10:19:32] 2026-02-04 09:17:52,136 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 10:19:32] 2026-02-04 09:17:52,136 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 10:19:32] 2026-02-04 09:17:52,136 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 10:19:32] 2026-02-04 09:17:52,136 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 10:19:32] 2026-02-04 09:17:52,136 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 10:19:32] 2026-02-04 09:17:52,136 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 10:19:32] 2026-02-04 09:17:52,137 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 10:19:32] 2026-02-04 09:17:52,137 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 10:19:32] 2026-02-04 09:17:52,137 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 10:19:32] 2026-02-04 09:17:52,137 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 10:19:32] 2026-02-04 09:17:52,137 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 10:19:32] 2026-02-04 09:17:52,137 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 10:19:32] 2026-02-04 09:17:52,137 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 10:19:32] 2026-02-04 09:17:52,137 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 10:19:32] 2026-02-04 09:17:52,137 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 10:19:32] 2026-02-04 09:17:52,137 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 10:19:32] 2026-02-04 09:17:52,138 | INFO     | job 6999412850 has completed (purged errors)
[2026-02-04 10:19:32] 2026-02-04 09:17:52,138 | INFO     | overall cleanup function is called
[2026-02-04 10:19:32] 2026-02-04 09:17:53,148 | INFO     | --- collectZombieJob: --- 10, [2707643]
[2026-02-04 10:19:32] 2026-02-04 09:17:53,148 | INFO     | zombie collector waiting for pid 2707643
[2026-02-04 10:19:32] 2026-02-04 09:17:53,148 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 10:19:32] 2026-02-04 09:17:53,148 | INFO     | collected zombie processes
[2026-02-04 10:19:32] 2026-02-04 09:17:53,148 | INFO     | will attempt to kill all subprocesses of pid=2707643
[2026-02-04 10:19:32] 2026-02-04 09:17:53,882 | INFO     | process IDs to be killed: [2707643] (in reverse order)
[2026-02-04 10:19:32] 2026-02-04 09:17:54,135 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 10:19:32] 2026-02-04 09:17:54,135 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 10:19:32] 2026-02-04 09:17:54,165 | INFO     | did not find any defunct processes belonging to 2707643
[2026-02-04 10:19:32] 2026-02-04 09:17:54,191 | INFO     | did not find any defunct processes belonging to 2707643
[2026-02-04 10:19:32] 2026-02-04 09:17:54,191 | INFO     | ready for new job
[2026-02-04 10:19:32] 2026-02-04 09:17:54,191 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 10:19:32] 2026-02-04 09:17:54,194 | INFO     | **************************************
[2026-02-04 10:19:32] 2026-02-04 09:17:54,194 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 10:19:32] 2026-02-04 09:17:54,194 | INFO     | **************************************
[2026-02-04 10:19:32] 2026-02-04 09:17:54,194 | INFO     | 
[2026-02-04 10:19:32] 2026-02-04 09:17:54,202 | INFO     | architecture information:
[2026-02-04 10:19:32] 2026-02-04 09:17:54,203 | INFO     | executing command: cat /etc/os-release
[2026-02-04 10:19:32] 2026-02-04 09:17:54,229 | INFO     | cat /etc/os-release:
[2026-02-04 10:19:32] NAME="CentOS Linux"
[2026-02-04 10:19:32] VERSION="7 (Core)"
[2026-02-04 10:19:32] ID="centos"
[2026-02-04 10:19:32] ID_LIKE="rhel fedora"
[2026-02-04 10:19:32] VERSION_ID="7"
[2026-02-04 10:19:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 10:19:32] ANSI_COLOR="0;31"
[2026-02-04 10:19:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 10:19:32] HOME_URL="https://www.centos.org/"
[2026-02-04 10:19:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 10:19:32] 
[2026-02-04 10:19:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 10:19:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 10:19:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 10:19:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 10:19:32] 
[2026-02-04 10:19:32] 2026-02-04 09:17:54,229 | INFO     | **************************************
[2026-02-04 10:19:32] 2026-02-04 09:17:54,732 | INFO     | executing command: df -mP /scratch/boinc/var/slot84/slots/0
[2026-02-04 10:19:32] 2026-02-04 09:17:54,755 | INFO     | sufficient remaining disk space (3208793554944 B)
[2026-02-04 10:19:32] 2026-02-04 09:17:54,755 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 10:19:32] 2026-02-04 09:17:54,755 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 10:19:32] 2026-02-04 09:17:54,755 | INFO     | update_server=False
[2026-02-04 10:19:32] 2026-02-04 09:17:54,755 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 10:19:32] 2026-02-04 09:17:54,861 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 10:19:32] 2026-02-04 09:17:54,861 | INFO     | aborting loop
[2026-02-04 10:19:32] 2026-02-04 09:17:55,142 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 10:19:32] 2026-02-04 09:17:55,543 | INFO     | all data control threads have been joined
[2026-02-04 10:19:32] 2026-02-04 09:17:55,654 | INFO     | all job control threads have been joined
[2026-02-04 10:19:32] 2026-02-04 09:17:55,683 | INFO     | all payload control threads have been joined
[2026-02-04 10:19:32] 2026-02-04 09:17:55,761 | INFO     | [job] retrieve thread has finished
[2026-02-04 10:19:32] 2026-02-04 09:17:55,866 | INFO     | [job] job monitor thread has finished
[2026-02-04 10:19:32] 2026-02-04 09:17:55,946 | INFO     | [job] validate thread has finished
[2026-02-04 10:19:32] 2026-02-04 09:17:56,027 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 10:19:32] 2026-02-04 09:17:56,341 | INFO     | [payload] validate_post thread has finished
[2026-02-04 10:19:32] 2026-02-04 09:17:56,479 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 10:19:32] 2026-02-04 09:17:56,502 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 10:19:32] 2026-02-04 09:17:56,549 | INFO     | [data] control thread has finished
[2026-02-04 10:19:32] 2026-02-04 09:17:56,660 | INFO     | [job] control thread has finished
[2026-02-04 10:19:32] 2026-02-04 09:17:56,685 | INFO     | [payload] control thread has finished
[2026-02-04 10:19:32] 2026-02-04 09:17:56,907 | INFO     | [data] copytool_in thread has finished
[2026-02-04 10:19:32] 2026-02-04 09:17:57,079 | INFO     | [payload] failed_post thread has finished
[2026-02-04 10:19:32] 2026-02-04 09:17:57,107 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 10:19:32] 2026-02-04 09:17:57,147 | INFO     | [data] copytool_out thread has finished
[2026-02-04 10:19:32] 2026-02-04 09:17:57,149 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 10:19:32] 2026-02-04 09:17:58,112 | INFO     | [job] queue monitor thread has finished
[2026-02-04 10:19:32] 2026-02-04 09:18:00,481 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 10:19:32] 2026-02-04 09:18:05,650 | INFO     | job.realtimelogging is not enabled
[2026-02-04 10:19:32] 2026-02-04 09:18:06,655 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 10:19:32] 2026-02-04 09:18:25,667 | INFO     | PID=2702529 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-04 10:19:32] 2026-02-04 09:18:25,668 | INFO     | .. there are 13 such processes running
[2026-02-04 10:19:32] 2026-02-04 09:18:25,669 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 10:19:32] 2026-02-04 09:18:25,669 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 10:19:32] 2026-02-04 09:18:25,669 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 10:19:32] 2026-02-04 09:18:52,481 | INFO     | [monitor] cgroup control has ended
[2026-02-04 10:19:32] 2026-02-04 09:18:54,272 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22569507059520)>', '<ExcThread(monitor, started 22569268029184)>']
[2026-02-04 10:19:32] 2026-02-04 09:18:54,788 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 10:19:32] 2026-02-04 09:18:54,789 | INFO     | [monitor] control thread has ended
[2026-02-04 10:19:32] 2026-02-04 09:18:59,298 | INFO     | all workflow threads have been joined
[2026-02-04 10:19:32] 2026-02-04 09:18:59,299 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 10:19:32] 2026-02-04 09:18:59,299 | INFO     | traces error code: 0
[2026-02-04 10:19:32] 2026-02-04 09:18:59,299 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 10:19:32] 2026-02-04 09:18:59,443 [wrapper] ==== pilot stdout END ====
[2026-02-04 10:19:32] 2026-02-04 09:18:59,447 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 10:19:32] 2026-02-04 09:18:59,451 [wrapper] pilotpid: 2702529
[2026-02-04 10:19:32] 2026-02-04 09:18:59,455 [wrapper] Pilot exit status: 0
[2026-02-04 10:19:32] 2026-02-04 09:18:59,469 [wrapper] pandaids: 6999412850
[2026-02-04 10:19:32] 2026-02-04 09:18:59,628 [wrapper] cleanup supervisor_pilot 3060089 2702530
[2026-02-04 10:19:32] 2026-02-04 09:18:59,632 [wrapper] Test setup, not cleaning
[2026-02-04 10:19:32] 2026-02-04 09:18:59,634 [wrapper] apfmon messages muted
[2026-02-04 10:19:32] 2026-02-04 09:18:59,637 [wrapper] ==== wrapper stdout END ====
[2026-02-04 10:19:32] 2026-02-04 09:18:59,640 [wrapper] ==== wrapper stderr END ====
[2026-02-04 10:19:32]  *** Error codes and diagnostics ***
[2026-02-04 10:19:32]     "exeErrorCode": 0,
[2026-02-04 10:19:32]     "exeErrorDiag": "",
[2026-02-04 10:19:32]     "pilotErrorCode": 0,
[2026-02-04 10:19:32]     "pilotErrorDiag": "",
[2026-02-04 10:19:32]  *** Listing of results directory ***
[2026-02-04 10:19:32] total 664988
[2026-02-04 10:19:32] -rw-r--r-- 1 boinc boinc    584422 Feb  3 16:10 pilot3.tar.gz
[2026-02-04 10:19:32] -rwx------ 1 boinc boinc     36322 Feb  3 16:10 runpilot2-wrapper.sh
[2026-02-04 10:19:32] -rw-r--r-- 1 boinc boinc      5111 Feb  3 16:11 queuedata.json
[2026-02-04 10:19:32] -rw-r--r-- 1 boinc boinc       100 Feb  4 05:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 10:19:32] -rwxr-xr-x 1 boinc boinc      7986 Feb  4 05:49 run_atlas
[2026-02-04 10:19:32] -rw-r--r-- 1 boinc boinc       105 Feb  4 05:49 job.xml
[2026-02-04 10:19:32] -rw-r--r-- 1 boinc boinc      6688 Feb  4 07:21 init_data.xml
[2026-02-04 10:19:32] -rw-r--r-- 2 boinc boinc 490822778 Feb  4 07:21 EVNT.48317889._000210.pool.root.1
[2026-02-04 10:19:32] -rw-r--r-- 2 boinc boinc     15845 Feb  4 07:21 start_atlas.sh
[2026-02-04 10:19:32] drwxrwx--x 2 boinc boinc      4096 Feb  4 07:21 shared
[2026-02-04 10:19:32] -rw-r--r-- 2 boinc boinc    597751 Feb  4 07:21 input.tar.gz
[2026-02-04 10:19:32] -rw-r--r-- 1 boinc boinc         0 Feb  4 07:21 boinc_lockfile
[2026-02-04 10:19:32] -rw-r--r-- 1 boinc boinc      2523 Feb  4 07:21 pandaJob.out
[2026-02-04 10:19:32] -rw------- 1 boinc boinc   1009228 Feb  4 07:21 agis_schedconf.cvmfs.json
[2026-02-04 10:19:32] -rw------- 1 boinc boinc   1511668 Feb  4 07:21 agis_ddmendpoints.agis.ALL.json
[2026-02-04 10:19:32] -rw------- 1 boinc boinc       443 Feb  4 07:21 workernode_map.json
[2026-02-04 10:19:32] drwx------ 5 boinc boinc      4096 Feb  4 07:21 pilot3
[2026-02-04 10:19:32] -rw------- 1 boinc boinc 182466439 Feb  4 10:17 HITS.48317892._011097.pool.root.1
[2026-02-04 10:19:32] -rw-r--r-- 1 boinc boinc       530 Feb  4 10:17 boinc_task_state.xml
[2026-02-04 10:19:32] -rw------- 1 boinc boinc      1029 Feb  4 10:17 memory_monitor_summary.json
[2026-02-04 10:19:32] -rw------- 1 boinc boinc    379084 Feb  4 10:17 log.48317892._011097.job.log.tgz.1
[2026-02-04 10:19:32] -rw------- 1 boinc boinc      6354 Feb  4 10:17 heartbeat.json
[2026-02-04 10:19:32] -rw------- 1 boinc boinc        95 Feb  4 10:18 pilot_heartbeat.json
[2026-02-04 10:19:32] -rw------- 1 boinc boinc      4903 Feb  4 10:18 pilotlog.txt
[2026-02-04 10:19:32] -rw------- 1 boinc boinc   1478947 Feb  4 10:18 log.48317892._011097.job.log.1
[2026-02-04 10:19:32] -rw------- 1 boinc boinc       357 Feb  4 10:18 output.list
[2026-02-04 10:19:32] -rw-r--r-- 1 boinc boinc       620 Feb  4 10:18 runtime_log
[2026-02-04 10:19:32] -rw------- 1 boinc boinc   1873920 Feb  4 10:18 result.tar.gz
[2026-02-04 10:19:32] -rw-r--r-- 1 boinc boinc      9205 Feb  4 10:18 runtime_log.err
[2026-02-04 10:19:32] -rw------- 1 boinc boinc       665 Feb  4 10:18 P5cKDmOEX78nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmSGVKDmFw8Ahm.diag
[2026-02-04 10:19:32] -rw-r--r-- 1 boinc boinc        27 Feb  4 10:19 wrapper_checkpoint.txt
[2026-02-04 10:19:32] -rw-r--r-- 1 boinc boinc      8192 Feb  4 10:19 boinc_mmap_file
[2026-02-04 10:19:32] -rw-r--r-- 1 boinc boinc     21102 Feb  4 10:19 stderr.txt
[2026-02-04 10:19:32] HITS file was successfully produced:
[2026-02-04 10:19:32] -rw------- 1 boinc boinc 182466439 Feb  4 10:17 shared/HITS.pool.root.1
[2026-02-04 10:19:32]  *** Contents of shared directory: ***
[2026-02-04 10:19:32] total 659952
[2026-02-04 10:19:32] -rw-r--r-- 2 boinc boinc 490822778 Feb  4 07:21 ATLAS.root_0
[2026-02-04 10:19:32] -rw-r--r-- 2 boinc boinc     15845 Feb  4 07:21 start_atlas.sh
[2026-02-04 10:19:32] -rw-r--r-- 2 boinc boinc    597751 Feb  4 07:21 input.tar.gz
[2026-02-04 10:19:32] -rw------- 1 boinc boinc 182466439 Feb  4 10:17 HITS.pool.root.1
[2026-02-04 10:19:32] -rw------- 1 boinc boinc   1873920 Feb  4 10:18 result.tar.gz
10:19:33 (2698487): run_atlas exited; CPU time 41647.908394
10:19:33 (2698487): called boinc_finish(0)

</stderr_txt>
]]>

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