Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
16:30:23 (277197): wrapper (7.7.26015): starting
16:30:23 (277197): wrapper: running run_atlas (--nthreads 3)
[2026-02-03 16:30:23] Arguments: --nthreads 3
[2026-02-03 16:30:23] Threads: 3
[2026-02-03 16:30:23] Checking for CVMFS
[2026-02-03 16:30:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-03 16:30:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-03 16:30:27] Running cvmfs_config stat atlas.cern.ch
[2026-02-03 16:30:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-03 16:30:28] 2.13.3.0 277407 0 29748 155835 3 1 6580097 8388608 0 130560 0 0 100.000 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-02-03 16:30:28] CVMFS is ok
[2026-02-03 16:30:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-03 16:30:28] Small home clusters do not require a local http proxy but it is suggested if
[2026-02-03 16:30:28] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-02-03 16:30:28] Further information can be found at the LHC@home message board.
[2026-02-03 16:30:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 16:30:28] Checking for apptainer binary...
[2026-02-03 16:30:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-03 16:30:28] Running /usr/bin/apptainer --version
[2026-02-03 16:30:28] apptainer version 1.4.3
[2026-02-03 16:30:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 16:30:28] debian-e15
[2026-02-03 16:30:28] apptainer works
[2026-02-03 16:30:28] Set ATHENA_PROC_NUMBER=3
[2026-02-03 16:30:28] Set ATHENA_CORE_NUMBER=3
[2026-02-03 16:30:28] Starting ATLAS job with PandaID=6994086078
[2026-02-03 16:30:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-03 18:08:02]  *** The last 200 lines of the pilot log: ***
[2026-02-03 18:08:02]  direct_access_lan=False
[2026-02-03 18:08:02]  direct_access_wan=False
[2026-02-03 18:08:02]  domain=
[2026-02-03 18:08:02]  filesize=308135
[2026-02-03 18:08:02]  filetype=log
[2026-02-03 18:08:02]  guid=24fb633a-521c-4a86-94d7-8afca1b6895b
[2026-02-03 18:08:02]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-03 18:08:02]  is_altstaged=None
[2026-02-03 18:08:02]  is_tar=False
[2026-02-03 18:08:02]  lfn=log.48442098._000350.job.log.tgz.1
[2026-02-03 18:08:02]  mtime=0
[2026-02-03 18:08:02]  protocol_id=None
[2026-02-03 18:08:02]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-03 18:08:02]  replicas=None
[2026-02-03 18:08:02]  scope=mc23_13p6TeV
[2026-02-03 18:08:02]  status=None
[2026-02-03 18:08:02]  status_code=0
[2026-02-03 18:08:02]  storage_token=
[2026-02-03 18:08:02]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-6994086078/log.48442098._000350.job.log.tgz.1
[2026-02-03 18:08:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/15/7b/log.48442098._000350.job.log.tgz.1
[2026-02-03 18:08:02]  workdir=None
[2026-02-03 18:08:02] ]
[2026-02-03 18:08:02] 2026-02-03 17:06:53,887 | INFO     | transferring file log.48442098._000350.job.log.tgz.1 from /var/lib/boinc-client/slots/0/PanDA_Pilot-6994086078/log.48442098._000350.job.log.tgz.1 to /var/lib/boinc
[2026-02-03 18:08:02] 2026-02-03 17:06:53,887 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-6994086078/log.48442098._000350.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.484420
[2026-02-03 18:08:02] 2026-02-03 17:06:53,900 | INFO     | adding to output.list: log.48442098._000350.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/15/7b/log.48442098._000350.job.log.tg
[2026-02-03 18:08:02] 2026-02-03 17:06:53,901 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-03 18:08:02] 2026-02-03 17:06:53,901 | INFO     | summary of transferred files:
[2026-02-03 18:08:02] 2026-02-03 17:06:53,901 | INFO     |  -- lfn=log.48442098._000350.job.log.tgz.1, status_code=0, status=transferred
[2026-02-03 18:08:02] 2026-02-03 17:06:53,901 | INFO     | stage-out finished correctly
[2026-02-03 18:08:02] 2026-02-03 17:06:54,030 | INFO     | time since job start (5765s) is within the limit (349056.0s)
[2026-02-03 18:08:02] 2026-02-03 17:06:54,772 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-03 18:08:02] 2026-02-03 17:06:54,811 | INFO     | job 6994086078 has state=finished
[2026-02-03 18:08:02] 2026-02-03 17:06:54,811 | INFO     | preparing for final server update for job 6994086078 in state='finished'
[2026-02-03 18:08:02] 2026-02-03 17:06:54,812 | INFO     | reading metadata from: /var/lib/boinc-client/slots/0/PanDA_Pilot-6994086078/jobReport.json
[2026-02-03 18:08:02] 2026-02-03 17:06:54,813 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/0/workernode_map.json
[2026-02-03 18:08:02] 2026-02-03 17:06:54,813 | INFO     | this job has now completed (state=finished)
[2026-02-03 18:08:02] 2026-02-03 17:06:54,813 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-03 18:08:02] 2026-02-03 17:06:54,813 | INFO     | log transfer has been attempted: DONE
[2026-02-03 18:08:02] 2026-02-03 17:06:54,813 | INFO     | job 6994086078 has finished - writing final server update
[2026-02-03 18:08:02] 2026-02-03 17:06:54,813 | INFO     | total number of processed events: 400 (read)
[2026-02-03 18:08:02] 2026-02-03 17:06:54,815 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6994086078/memory_monitor_summary.json (trf name=prmon)
[2026-02-03 18:08:02] 2026-02-03 17:06:54,815 | INFO     | extracted standard info from prmon json
[2026-02-03 18:08:02] 2026-02-03 17:06:54,815 | INFO     | extracted standard memory fields from prmon json
[2026-02-03 18:08:02] 2026-02-03 17:06:54,815 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-03 18:08:02] 2026-02-03 17:06:54,815 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-03 18:08:02] 2026-02-03 17:06:54,815 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-03 18:08:02] 2026-02-03 17:06:54,816 | INFO     | fitting pss+swap vs Time
[2026-02-03 18:08:02] 2026-02-03 17:06:54,816 | INFO     | sum of square deviations: 211285822.0
[2026-02-03 18:08:02] 2026-02-03 17:06:54,816 | INFO     | sum of deviations: -23035032890.0
[2026-02-03 18:08:02] 2026-02-03 17:06:54,816 | INFO     | mean x: 1770135625.5
[2026-02-03 18:08:02] 2026-02-03 17:06:54,816 | INFO     | mean y: 2524569.977272727
[2026-02-03 18:08:02] 2026-02-03 17:06:54,816 | INFO     | intersect: 192988177687.55002
[2026-02-03 18:08:02] 2026-02-03 17:06:54,816 | INFO     | chi2: 0.1698440116240451
[2026-02-03 18:08:02] 2026-02-03 17:06:54,816 | INFO     | current memory leak: -109.02 B/s (using 88 data points, chi2=0.17)
[2026-02-03 18:08:02] 2026-02-03 17:06:54,817 | INFO     | could have reported an average CPU frequency of 2452 MHz (7 samples)
[2026-02-03 18:08:02] 2026-02-03 17:06:54,817 | INFO     | ..............................
[2026-02-03 18:08:02] 2026-02-03 17:06:54,817 | INFO     | . Timing measurements:
[2026-02-03 18:08:02] 2026-02-03 17:06:54,817 | INFO     | . get job = 0 s
[2026-02-03 18:08:02] 2026-02-03 17:06:54,817 | INFO     | . initial setup = 6 s
[2026-02-03 18:08:02] 2026-02-03 17:06:54,817 | INFO     | . payload setup = 4 s
[2026-02-03 18:08:02] 2026-02-03 17:06:54,817 | INFO     | . stage-in = 0 s
[2026-02-03 18:08:02] 2026-02-03 17:06:54,817 | INFO     | . payload execution = 5745 s
[2026-02-03 18:08:02] 2026-02-03 17:06:54,817 | INFO     | . stage-out = 0 s
[2026-02-03 18:08:02] 2026-02-03 17:06:54,817 | INFO     | . log creation = 0 s
[2026-02-03 18:08:02] 2026-02-03 17:06:54,817 | INFO     | ..............................
[2026-02-03 18:08:02] 2026-02-03 17:06:54,855 | INFO     | 
[2026-02-03 18:08:02] 2026-02-03 17:06:54,855 | INFO     | job summary report
[2026-02-03 18:08:02] 2026-02-03 17:06:54,855 | INFO     | --------------------------------------------------
[2026-02-03 18:08:02] 2026-02-03 17:06:54,855 | INFO     | PanDA job id: 6994086078
[2026-02-03 18:08:02] 2026-02-03 17:06:54,856 | INFO     | task id: 48442098
[2026-02-03 18:08:02] 2026-02-03 17:06:54,856 | INFO     | errors: (none)
[2026-02-03 18:08:02] 2026-02-03 17:06:54,856 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-03 18:08:02] 2026-02-03 17:06:54,856 | INFO     | pilot state: finished 
[2026-02-03 18:08:02] 2026-02-03 17:06:54,856 | INFO     | transexitcode: 0
[2026-02-03 18:08:02] 2026-02-03 17:06:54,856 | INFO     | exeerrorcode: 0
[2026-02-03 18:08:02] 2026-02-03 17:06:54,856 | INFO     | exeerrordiag: 
[2026-02-03 18:08:02] 2026-02-03 17:06:54,856 | INFO     | exitcode: 0
[2026-02-03 18:08:02] 2026-02-03 17:06:54,856 | INFO     | exitmsg: OK
[2026-02-03 18:08:02] 2026-02-03 17:06:54,856 | INFO     | cpuconsumptiontime: 16839 s
[2026-02-03 18:08:02] 2026-02-03 17:06:54,856 | INFO     | nevents: 400
[2026-02-03 18:08:02] 2026-02-03 17:06:54,856 | INFO     | neventsw: 0
[2026-02-03 18:08:02] 2026-02-03 17:06:54,856 | INFO     | pid: 286044
[2026-02-03 18:08:02] 2026-02-03 17:06:54,857 | INFO     | pgrp: 286044
[2026-02-03 18:08:02] 2026-02-03 17:06:54,857 | INFO     | corecount: 3
[2026-02-03 18:08:02] 2026-02-03 17:06:54,857 | INFO     | event service: False
[2026-02-03 18:08:02] 2026-02-03 17:06:54,857 | INFO     | sizes: {0: 2278281, 10: 2278281, 5754: 2314130, 5755: 2314324}
[2026-02-03 18:08:02] 2026-02-03 17:06:54,857 | INFO     | --------------------------------------------------
[2026-02-03 18:08:02] 2026-02-03 17:06:54,857 | INFO     | 
[2026-02-03 18:08:02] 2026-02-03 17:06:54,857 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2026-02-03 18:08:02] 2026-02-03 17:06:54,871 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-03 18:08:02] 2026-02-03 17:06:54,871 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-03 18:08:02] 2026-02-03 17:06:54,871 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-03 18:08:02] 2026-02-03 17:06:54,871 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-03 18:08:02] 2026-02-03 17:06:54,871 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-03 18:08:02] 2026-02-03 17:06:54,871 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-03 18:08:02] 2026-02-03 17:06:54,872 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-03 18:08:02] 2026-02-03 17:06:54,872 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-03 18:08:02] 2026-02-03 17:06:54,872 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-03 18:08:02] 2026-02-03 17:06:54,872 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-03 18:08:02] 2026-02-03 17:06:54,872 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-03 18:08:02] 2026-02-03 17:06:54,872 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-03 18:08:02] 2026-02-03 17:06:54,872 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-03 18:08:02] 2026-02-03 17:06:54,872 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-03 18:08:02] 2026-02-03 17:06:54,872 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-03 18:08:02] 2026-02-03 17:06:54,872 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-03 18:08:02] 2026-02-03 17:06:54,872 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-03 18:08:02] 2026-02-03 17:06:54,872 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-03 18:08:02] 2026-02-03 17:06:54,872 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-03 18:08:02] 2026-02-03 17:06:54,872 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-03 18:08:02] 2026-02-03 17:06:54,872 | INFO     | job 6994086078 has completed (purged errors)
[2026-02-03 18:08:02] 2026-02-03 17:06:54,872 | INFO     | overall cleanup function is called
[2026-02-03 18:08:02] 2026-02-03 17:06:55,879 | INFO     | --- collectZombieJob: --- 10, [286044]
[2026-02-03 18:08:02] 2026-02-03 17:06:55,879 | INFO     | zombie collector waiting for pid 286044
[2026-02-03 18:08:02] 2026-02-03 17:06:55,879 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-03 18:08:02] 2026-02-03 17:06:55,879 | INFO     | collected zombie processes
[2026-02-03 18:08:02] 2026-02-03 17:06:55,880 | INFO     | will attempt to kill all subprocesses of pid=286044
[2026-02-03 18:08:02] 2026-02-03 17:06:55,924 | INFO     | process IDs to be killed: [286044] (in reverse order)
[2026-02-03 18:08:02] 2026-02-03 17:06:55,966 | WARNING  | found no corresponding commands to process id(s)
[2026-02-03 18:08:02] 2026-02-03 17:06:55,966 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-03 18:08:02] 2026-02-03 17:06:55,968 | INFO     | did not find any defunct processes belonging to 286044
[2026-02-03 18:08:02] 2026-02-03 17:06:55,969 | INFO     | did not find any defunct processes belonging to 286044
[2026-02-03 18:08:02] 2026-02-03 17:06:55,969 | INFO     | ready for new job
[2026-02-03 18:08:02] 2026-02-03 17:06:55,969 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-03 18:08:02] 2026-02-03 17:06:55,970 | INFO     | **************************************
[2026-02-03 18:08:02] 2026-02-03 17:06:55,970 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-03 18:08:02] 2026-02-03 17:06:55,970 | INFO     | **************************************
[2026-02-03 18:08:02] 2026-02-03 17:06:55,970 | INFO     | 
[2026-02-03 18:08:02] 2026-02-03 17:06:55,971 | INFO     | architecture information:
[2026-02-03 18:08:02] 2026-02-03 17:06:55,971 | INFO     | executing command: cat /etc/os-release
[2026-02-03 18:08:02] 2026-02-03 17:06:55,983 | INFO     | cat /etc/os-release:
[2026-02-03 18:08:02] NAME="CentOS Linux"
[2026-02-03 18:08:02] VERSION="7 (Core)"
[2026-02-03 18:08:02] ID="centos"
[2026-02-03 18:08:02] ID_LIKE="rhel fedora"
[2026-02-03 18:08:02] VERSION_ID="7"
[2026-02-03 18:08:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-03 18:08:02] ANSI_COLOR="0;31"
[2026-02-03 18:08:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-03 18:08:02] HOME_URL="https://www.centos.org/"
[2026-02-03 18:08:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-03 18:08:02] 
[2026-02-03 18:08:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-03 18:08:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-03 18:08:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-03 18:08:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-03 18:08:02] 
[2026-02-03 18:08:02] 2026-02-03 17:06:55,983 | INFO     | **************************************
[2026-02-03 18:08:02] 2026-02-03 17:06:56,486 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2026-02-03 18:08:02] 2026-02-03 17:06:56,497 | INFO     | sufficient remaining disk space (125976969216 B)
[2026-02-03 18:08:02] 2026-02-03 17:06:56,497 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-03 18:08:02] 2026-02-03 17:06:56,497 | INFO     | current server update state: UPDATING_FINAL
[2026-02-03 18:08:02] 2026-02-03 17:06:56,498 | INFO     | update_server=False
[2026-02-03 18:08:02] 2026-02-03 17:06:56,498 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-03 18:08:02] 2026-02-03 17:06:56,498 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-03 18:08:02] 2026-02-03 17:06:56,498 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-03 18:08:02] 2026-02-03 17:06:56,552 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-03 18:08:02] 2026-02-03 17:06:56,552 | INFO     | aborting loop
[2026-02-03 18:08:02] 2026-02-03 17:06:56,659 | INFO     | all data control threads have been joined
[2026-02-03 18:08:02] 2026-02-03 17:06:56,732 | INFO     | all job control threads have been joined
[2026-02-03 18:08:02] 2026-02-03 17:06:56,946 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-03 18:08:02] 2026-02-03 17:06:57,462 | INFO     | all payload control threads have been joined
[2026-02-03 18:08:02] 2026-02-03 17:06:57,500 | INFO     | [job] queue monitor thread has finished
[2026-02-03 18:08:02] 2026-02-03 17:06:57,503 | INFO     | [job] retrieve thread has finished
[2026-02-03 18:08:02] 2026-02-03 17:06:57,556 | INFO     | [job] job monitor thread has finished
[2026-02-03 18:08:02] 2026-02-03 17:06:57,664 | INFO     | [data] control thread has finished
[2026-02-03 18:08:02] 2026-02-03 17:06:57,737 | INFO     | [job] control thread has finished
[2026-02-03 18:08:02] 2026-02-03 17:06:57,746 | INFO     | [payload] validate_post thread has finished
[2026-02-03 18:08:02] 2026-02-03 17:06:57,960 | INFO     | [payload] validate_pre thread has finished
[2026-02-03 18:08:02] 2026-02-03 17:06:58,086 | INFO     | [job] validate thread has finished
[2026-02-03 18:08:02] 2026-02-03 17:06:58,463 | INFO     | [payload] control thread has finished
[2026-02-03 18:08:02] 2026-02-03 17:06:58,467 | INFO     | [job] create_data_payload thread has finished
[2026-02-03 18:08:02] 2026-02-03 17:06:58,512 | INFO     | [data] copytool_in thread has finished
[2026-02-03 18:08:02] 2026-02-03 17:06:58,767 | INFO     | [payload] failed_post thread has finished
[2026-02-03 18:08:02] 2026-02-03 17:06:58,952 | INFO     | [data] copytool_out thread has finished
[2026-02-03 18:08:02] 2026-02-03 17:06:58,987 | INFO     | [payload] execute_payloads thread has finished
[2026-02-03 18:08:02] 2026-02-03 17:07:00,503 | INFO     | [data] queue_monitor thread has finished
[2026-02-03 18:08:02] 2026-02-03 17:07:06,811 | INFO     | job.realtimelogging is not enabled
[2026-02-03 18:08:02] 2026-02-03 17:07:07,817 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-03 18:08:02] 2026-02-03 17:07:27,194 | INFO     | PID=281557 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-03 18:08:02] 2026-02-03 17:07:27,195 | INFO     | found 0 job(s) in 20 queues
[2026-02-03 18:08:02] 2026-02-03 17:07:27,195 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-03 18:08:02] 2026-02-03 17:07:27,195 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-03 18:08:02] 2026-02-03 17:07:56,455 | INFO     | [monitor] cgroup control has ended
[2026-02-03 18:08:02] 2026-02-03 17:07:57,327 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139636358010688)>', '<ExcThread(monitor, started 139635393017600)>']
[2026-02-03 18:08:02] 2026-02-03 17:07:57,349 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-03 18:08:02] 2026-02-03 17:07:57,349 | INFO     | [monitor] control thread has ended
[2026-02-03 18:08:02] 2026-02-03 17:08:02,347 | INFO     | all workflow threads have been joined
[2026-02-03 18:08:02] 2026-02-03 17:08:02,348 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-03 18:08:02] 2026-02-03 17:08:02,348 | INFO     | traces error code: 0
[2026-02-03 18:08:02] 2026-02-03 17:08:02,348 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-03 18:08:02] 2026-02-03 17:08:02,432 [wrapper] ==== pilot stdout END ====
[2026-02-03 18:08:02] 2026-02-03 17:08:02,434 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-03 18:08:02] 2026-02-03 17:08:02,436 [wrapper] pilotpid: 281557
[2026-02-03 18:08:02] 2026-02-03 17:08:02,438 [wrapper] Pilot exit status: 0
[2026-02-03 18:08:02] 2026-02-03 17:08:02,446 [wrapper] pandaids: 6994086078
[2026-02-03 18:08:02] 2026-02-03 17:08:02,469 [wrapper] cleanup supervisor_pilot  291634 281558
[2026-02-03 18:08:02] 2026-02-03 17:08:02,471 [wrapper] Test setup, not cleaning
[2026-02-03 18:08:02] 2026-02-03 17:08:02,473 [wrapper] apfmon messages muted
[2026-02-03 18:08:02] 2026-02-03 17:08:02,475 [wrapper] ==== wrapper stdout END ====
[2026-02-03 18:08:02] 2026-02-03 17:08:02,477 [wrapper] ==== wrapper stderr END ====
[2026-02-03 18:08:02]  *** Error codes and diagnostics ***
[2026-02-03 18:08:02]     "exeErrorCode": 0,
[2026-02-03 18:08:02]     "exeErrorDiag": "",
[2026-02-03 18:08:02]     "pilotErrorCode": 0,
[2026-02-03 18:08:02]     "pilotErrorDiag": "",
[2026-02-03 18:08:02]  *** Listing of results directory ***
[2026-02-03 18:08:02] total 667916
[2026-02-03 18:08:02] -rw-r--r-- 1 boinc boinc    584422 Feb  3 10:31 pilot3.tar.gz
[2026-02-03 18:08:02] -rwx------ 1 boinc boinc     36322 Feb  3 10:35 runpilot2-wrapper.sh
[2026-02-03 18:08:02] -rw-r--r-- 1 boinc boinc      5111 Feb  3 10:37 queuedata.json
[2026-02-03 18:08:02] -rw-r--r-- 1 boinc boinc       100 Feb  3 16:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-03 18:08:02] -rwxr-xr-x 1 boinc boinc      7986 Feb  3 16:30 run_atlas
[2026-02-03 18:08:02] -rw-r--r-- 1 boinc boinc       105 Feb  3 16:30 job.xml
[2026-02-03 18:08:02] -rw-r--r-- 2 boinc boinc     15845 Feb  3 16:30 start_atlas.sh
[2026-02-03 18:08:02] drwxrwx--x 2 boinc boinc      4096 Feb  3 16:30 shared
[2026-02-03 18:08:02] -rw-r--r-- 2 boinc boinc    597754 Feb  3 16:30 input.tar.gz
[2026-02-03 18:08:02] -rw-r--r-- 1 boinc boinc      6671 Feb  3 16:30 init_data.xml
[2026-02-03 18:08:02] -rw-r--r-- 2 boinc boinc 494578406 Feb  3 16:30 EVNT.48442096._000007.pool.root.1
[2026-02-03 18:08:02] -rw-r--r-- 1 boinc boinc         0 Feb  3 16:30 boinc_setup_complete
[2026-02-03 18:08:02] -rw-r--r-- 1 boinc boinc         0 Feb  3 16:30 boinc_lockfile
[2026-02-03 18:08:02] -rw-r--r-- 1 boinc boinc      2527 Feb  3 16:30 pandaJob.out
[2026-02-03 18:08:02] -rw------- 1 boinc boinc   1009258 Feb  3 16:30 agis_schedconf.cvmfs.json
[2026-02-03 18:08:02] -rw------- 1 boinc boinc   1511668 Feb  3 16:30 agis_ddmendpoints.agis.ALL.json
[2026-02-03 18:08:02] -rw------- 1 boinc boinc       427 Feb  3 16:30 workernode_map.json
[2026-02-03 18:08:02] drwx------ 5 boinc boinc      4096 Feb  3 16:30 pilot3
[2026-02-03 18:08:02] -rw------- 1 boinc boinc 183128856 Feb  3 18:06 HITS.48442098._000350.pool.root.1
[2026-02-03 18:08:02] -rw-r--r-- 1 boinc boinc       530 Feb  3 18:06 boinc_task_state.xml
[2026-02-03 18:08:02] -rw------- 1 boinc boinc      1025 Feb  3 18:06 memory_monitor_summary.json
[2026-02-03 18:08:02] -rw------- 1 boinc boinc    308135 Feb  3 18:06 log.48442098._000350.job.log.tgz.1
[2026-02-03 18:08:02] -rw------- 1 boinc boinc      6322 Feb  3 18:06 heartbeat.json
[2026-02-03 18:08:02] -rw------- 1 boinc boinc        95 Feb  3 18:07 pilot_heartbeat.json
[2026-02-03 18:08:02] -rw-r--r-- 1 boinc boinc      8192 Feb  3 18:07 boinc_mmap_file
[2026-02-03 18:08:02] -rw-r--r-- 1 boinc boinc        27 Feb  3 18:07 wrapper_checkpoint.txt
[2026-02-03 18:08:02] -rw------- 1 boinc boinc      4823 Feb  3 18:08 pilotlog.txt
[2026-02-03 18:08:02] -rw------- 1 boinc boinc    839063 Feb  3 18:08 log.48442098._000350.job.log.1
[2026-02-03 18:08:02] -rw------- 1 boinc boinc       357 Feb  3 18:08 output.list
[2026-02-03 18:08:02] -rw-r--r-- 1 boinc boinc       620 Feb  3 18:08 runtime_log
[2026-02-03 18:08:02] -rw------- 1 boinc boinc   1167360 Feb  3 18:08 result.tar.gz
[2026-02-03 18:08:02] -rw------- 1 boinc boinc       644 Feb  3 18:08 z16LDm0zR78n9Rq4apOajLDm4fhM0noT9bVooX4SDmcPUKDmdzxxym.diag
[2026-02-03 18:08:02] -rw-r--r-- 1 boinc boinc      8900 Feb  3 18:08 runtime_log.err
[2026-02-03 18:08:02] -rw-r--r-- 1 boinc boinc     20989 Feb  3 18:08 stderr.txt
[2026-02-03 18:08:02] HITS file was successfully produced:
[2026-02-03 18:08:02] -rw------- 1 boinc boinc 183128856 Feb  3 18:06 shared/HITS.pool.root.1
[2026-02-03 18:08:02]  *** Contents of shared directory: ***
[2026-02-03 18:08:02] total 663576
[2026-02-03 18:08:02] -rw-r--r-- 2 boinc boinc     15845 Feb  3 16:30 start_atlas.sh
[2026-02-03 18:08:02] -rw-r--r-- 2 boinc boinc    597754 Feb  3 16:30 input.tar.gz
[2026-02-03 18:08:02] -rw-r--r-- 2 boinc boinc 494578406 Feb  3 16:30 ATLAS.root_0
[2026-02-03 18:08:02] -rw------- 1 boinc boinc 183128856 Feb  3 18:06 HITS.pool.root.1
[2026-02-03 18:08:02] -rw------- 1 boinc boinc   1167360 Feb  3 18:08 result.tar.gz
18:08:03 (277197): run_atlas exited; CPU time 16869.316195
18:08:03 (277197): called boinc_finish(0)

</stderr_txt>
]]>

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