Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
12:39:16 (1197271): wrapper (7.7.26015): starting
12:39:16 (1197271): wrapper: running run_atlas (--nthreads 12)
[2026-02-04 12:39:16] Arguments: --nthreads 12
[2026-02-04 12:39:16] Threads: 12
[2026-02-04 12:39:16] Checking for CVMFS
[2026-02-04 12:39:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-04 12:39:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-04 12:39:17] Running cvmfs_config stat atlas.cern.ch
[2026-02-04 12:39:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-04 12:39:17] 2.13.3.0 1749563 9683 51892 155866 2 188 3539531 4096000 2736 130560 0 11202681 99.994 343673 1129 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.85.111:3128 1
[2026-02-04 12:39:17] CVMFS is ok
[2026-02-04 12:39:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 12:39:17] Checking for apptainer binary...
[2026-02-04 12:39:17] apptainer is not installed, using version from CVMFS
[2026-02-04 12:39:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 12:39:18] dualxeon2
[2026-02-04 12:39:18] apptainer works
[2026-02-04 12:39:18] Set ATHENA_PROC_NUMBER=12
[2026-02-04 12:39:18] Set ATHENA_CORE_NUMBER=12
[2026-02-04 12:39:18] Starting ATLAS job with PandaID=6998615371
[2026-02-04 12:39:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 15:43:14]  *** The last 200 lines of the pilot log: ***
[2026-02-04 15:43:14] 2026-02-04 15:42:31,176 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-04 15:43:14] 2026-02-04 15:42:31,176 | INFO     | log transfer has been attempted: DONE
[2026-02-04 15:43:14] 2026-02-04 15:42:31,176 | INFO     | job 6998615371 has finished - writing final server update
[2026-02-04 15:43:14] 2026-02-04 15:42:31,177 | INFO     | total number of processed events: 400 (read)
[2026-02-04 15:43:14] 2026-02-04 15:42:31,183 | INFO     | using path: /opt/boinc/instance_homes/boinc_31417/slots/0/PanDA_Pilot-6998615371/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 15:43:14] 2026-02-04 15:42:31,184 | INFO     | extracted standard info from prmon json
[2026-02-04 15:43:14] 2026-02-04 15:42:31,184 | INFO     | extracted standard memory fields from prmon json
[2026-02-04 15:43:14] 2026-02-04 15:42:31,184 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-04 15:43:14] 2026-02-04 15:42:31,185 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-04 15:43:14] 2026-02-04 15:42:31,185 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-04 15:43:14] 2026-02-04 15:42:31,188 | INFO     | fitting pss+swap vs Time
[2026-02-04 15:43:14] 2026-02-04 15:42:31,189 | INFO     | sum of square deviations: 1808350185.0
[2026-02-04 15:43:14] 2026-02-04 15:42:31,190 | INFO     | sum of deviations: 44826773875.500015
[2026-02-04 15:43:14] 2026-02-04 15:42:31,190 | INFO     | mean x: 1770214274.5
[2026-02-04 15:43:14] 2026-02-04 15:42:31,190 | INFO     | mean y: 2784901.1166666667
[2026-02-04 15:43:14] 2026-02-04 15:42:31,190 | INFO     | intersect: -43878646722.25766
[2026-02-04 15:43:14] 2026-02-04 15:42:31,191 | INFO     | chi2: 2.896441982945734
[2026-02-04 15:43:14] 2026-02-04 15:42:31,191 | INFO     | sum of square deviations: 1661798600.0
[2026-02-04 15:43:14] 2026-02-04 15:42:31,192 | INFO     | sum of deviations: 57159097850.99999
[2026-02-04 15:43:14] 2026-02-04 15:42:31,193 | INFO     | mean x: 1770214122.0
[2026-02-04 15:43:14] 2026-02-04 15:42:31,193 | INFO     | mean y: 2797405.16
[2026-02-04 15:43:14] 2026-02-04 15:42:31,193 | INFO     | intersect: -60885352468.488976
[2026-02-04 15:43:14] 2026-02-04 15:42:31,193 | INFO     | chi2: 2.078222226319177
[2026-02-04 15:43:14] 2026-02-04 15:42:31,193 | INFO     | current chi2=2.078222226319177 (change=28.24913329679101 %)
[2026-02-04 15:43:14] 2026-02-04 15:42:31,194 | INFO     | sum of square deviations: 1523386702.5
[2026-02-04 15:43:14] 2026-02-04 15:42:31,195 | INFO     | sum of deviations: 54653744311.50001
[2026-02-04 15:43:14] 2026-02-04 15:42:31,195 | INFO     | mean x: 1770213969.5
[2026-02-04 15:43:14] 2026-02-04 15:42:31,195 | INFO     | mean y: 2794641.535294118
[2026-02-04 15:43:14] 2026-02-04 15:42:31,195 | INFO     | intersect: -63506241840.748474
[2026-02-04 15:43:14] 2026-02-04 15:42:31,196 | INFO     | chi2: 2.079178137005155
[2026-02-04 15:43:14] 2026-02-04 15:42:31,196 | INFO     | current chi2=2.079178137005155 (change=-0.04599655772477483 %)
[2026-02-04 15:43:14] 2026-02-04 15:42:31,196 | INFO     | right removable region: 169
[2026-02-04 15:43:14] 2026-02-04 15:42:31,196 | INFO     | sum of square deviations: 1661798600.0
[2026-02-04 15:43:14] 2026-02-04 15:42:31,197 | INFO     | sum of deviations: 2299013445.0
[2026-02-04 15:43:14] 2026-02-04 15:42:31,197 | INFO     | mean x: 1770214427.0
[2026-02-04 15:43:14] 2026-02-04 15:42:31,198 | INFO     | mean y: 2828847.422857143
[2026-02-04 15:43:14] 2026-02-04 15:42:31,198 | INFO     | intersect: -2446172354.1703873
[2026-02-04 15:43:14] 2026-02-04 15:42:31,198 | INFO     | chi2: 0.9795035767884647
[2026-02-04 15:43:14] 2026-02-04 15:42:31,198 | INFO     | current chi2=0.9795035767884647 (change=66.18252384975128 %)
[2026-02-04 15:43:14] 2026-02-04 15:42:31,199 | INFO     | sum of square deviations: 1523386702.5
[2026-02-04 15:43:14] 2026-02-04 15:42:31,200 | INFO     | sum of deviations: -8501845171.000001
[2026-02-04 15:43:14] 2026-02-04 15:42:31,200 | INFO     | mean x: 1770214579.5
[2026-02-04 15:43:14] 2026-02-04 15:42:31,200 | INFO     | mean y: 2840646.7529411763
[2026-02-04 15:43:14] 2026-02-04 15:42:31,200 | INFO     | intersect: 9882203680.221373
[2026-02-04 15:43:14] 2026-02-04 15:42:31,200 | INFO     | chi2: 0.849102965888219
[2026-02-04 15:43:14] 2026-02-04 15:42:31,201 | INFO     | current chi2=0.849102965888219 (change=13.312928506886628 %)
[2026-02-04 15:43:14] 2026-02-04 15:42:31,201 | INFO     | left removable region: 20
[2026-02-04 15:43:14] 2026-02-04 15:42:31,201 | INFO     | sum of square deviations: 1025693650.0
[2026-02-04 15:43:14] 2026-02-04 15:42:31,202 | INFO     | sum of deviations: 1848009395.9999998
[2026-02-04 15:43:14] 2026-02-04 15:42:31,202 | INFO     | mean x: 1770214549.0
[2026-02-04 15:43:14] 2026-02-04 15:42:31,202 | INFO     | mean y: 2856913.711409396
[2026-02-04 15:43:14] 2026-02-04 15:42:31,202 | INFO     | intersect: -3186568232.371831
[2026-02-04 15:43:14] 2026-02-04 15:42:31,203 | INFO     | chi2: 0.001378189963682527
[2026-02-04 15:43:14] 2026-02-04 15:42:31,203 | INFO     | current memory leak: 1.80 B/s (using 149 data points, chi2=0.00)
[2026-02-04 15:43:14] 2026-02-04 15:42:31,203 | INFO     | could have reported an average CPU frequency of 2594 MHz (10 samples)
[2026-02-04 15:43:14] 2026-02-04 15:42:31,204 | INFO     | ..............................
[2026-02-04 15:43:14] 2026-02-04 15:42:31,204 | INFO     | . Timing measurements:
[2026-02-04 15:43:14] 2026-02-04 15:42:31,204 | INFO     | . get job = 0 s
[2026-02-04 15:43:14] 2026-02-04 15:42:31,204 | INFO     | . initial setup = 11 s
[2026-02-04 15:43:14] 2026-02-04 15:42:31,204 | INFO     | . payload setup = 12 s
[2026-02-04 15:43:14] 2026-02-04 15:42:31,204 | INFO     | . stage-in = 0 s
[2026-02-04 15:43:14] 2026-02-04 15:42:31,204 | INFO     | . payload execution = 10938 s
[2026-02-04 15:43:14] 2026-02-04 15:42:31,204 | INFO     | . stage-out = 1 s
[2026-02-04 15:43:14] 2026-02-04 15:42:31,204 | INFO     | . log creation = 0 s
[2026-02-04 15:43:14] 2026-02-04 15:42:31,205 | INFO     | ..............................
[2026-02-04 15:43:14] 2026-02-04 15:42:31,311 | INFO     | 
[2026-02-04 15:43:14] 2026-02-04 15:42:31,311 | INFO     | job summary report
[2026-02-04 15:43:14] 2026-02-04 15:42:31,311 | INFO     | --------------------------------------------------
[2026-02-04 15:43:14] 2026-02-04 15:42:31,311 | INFO     | PanDA job id: 6998615371
[2026-02-04 15:43:14] 2026-02-04 15:42:31,312 | INFO     | task id: 48431096
[2026-02-04 15:43:14] 2026-02-04 15:42:31,312 | INFO     | errors: (none)
[2026-02-04 15:43:14] 2026-02-04 15:42:31,312 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 15:43:14] 2026-02-04 15:42:31,312 | INFO     | pilot state: finished 
[2026-02-04 15:43:14] 2026-02-04 15:42:31,312 | INFO     | transexitcode: 0
[2026-02-04 15:43:14] 2026-02-04 15:42:31,312 | INFO     | exeerrorcode: 0
[2026-02-04 15:43:14] 2026-02-04 15:42:31,312 | INFO     | exeerrordiag: 
[2026-02-04 15:43:14] 2026-02-04 15:42:31,312 | INFO     | exitcode: 0
[2026-02-04 15:43:14] 2026-02-04 15:42:31,312 | INFO     | exitmsg: OK
[2026-02-04 15:43:14] 2026-02-04 15:42:31,312 | INFO     | cpuconsumptiontime: 83440 s
[2026-02-04 15:43:14] 2026-02-04 15:42:31,313 | INFO     | nevents: 400
[2026-02-04 15:43:14] 2026-02-04 15:42:31,313 | INFO     | neventsw: 0
[2026-02-04 15:43:14] 2026-02-04 15:42:31,313 | INFO     | pid: 1208474
[2026-02-04 15:43:14] 2026-02-04 15:42:31,313 | INFO     | pgrp: 1208474
[2026-02-04 15:43:14] 2026-02-04 15:42:31,313 | INFO     | corecount: 12
[2026-02-04 15:43:14] 2026-02-04 15:42:31,313 | INFO     | event service: False
[2026-02-04 15:43:14] 2026-02-04 15:42:31,313 | INFO     | sizes: {0: 2277856, 1: 2278317, 10954: 2307325, 10955: 2307324, 10958: 2316646}
[2026-02-04 15:43:14] 2026-02-04 15:42:31,313 | INFO     | --------------------------------------------------
[2026-02-04 15:43:14] 2026-02-04 15:42:31,313 | INFO     | 
[2026-02-04 15:43:14] 2026-02-04 15:42:31,314 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/0
[2026-02-04 15:43:14] 2026-02-04 15:42:31,331 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 15:43:14] 2026-02-04 15:42:31,331 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 15:43:14] 2026-02-04 15:42:31,331 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 15:43:14] 2026-02-04 15:42:31,331 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 15:43:14] 2026-02-04 15:42:31,331 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 15:43:14] 2026-02-04 15:42:31,332 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 15:43:14] 2026-02-04 15:42:31,332 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 15:43:14] 2026-02-04 15:42:31,332 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 15:43:14] 2026-02-04 15:42:31,332 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 15:43:14] 2026-02-04 15:42:31,332 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 15:43:14] 2026-02-04 15:42:31,332 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 15:43:14] 2026-02-04 15:42:31,332 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 15:43:14] 2026-02-04 15:42:31,332 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 15:43:14] 2026-02-04 15:42:31,332 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 15:43:14] 2026-02-04 15:42:31,333 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 15:43:14] 2026-02-04 15:42:31,333 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 15:43:14] 2026-02-04 15:42:31,333 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 15:43:14] 2026-02-04 15:42:31,333 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 15:43:14] 2026-02-04 15:42:31,333 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 15:43:14] 2026-02-04 15:42:31,333 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 15:43:14] 2026-02-04 15:42:31,333 | INFO     | job 6998615371 has completed (purged errors)
[2026-02-04 15:43:14] 2026-02-04 15:42:31,334 | INFO     | overall cleanup function is called
[2026-02-04 15:43:14] 2026-02-04 15:42:32,341 | INFO     | --- collectZombieJob: --- 10, [1208474]
[2026-02-04 15:43:14] 2026-02-04 15:42:32,342 | INFO     | zombie collector waiting for pid 1208474
[2026-02-04 15:43:14] 2026-02-04 15:42:32,342 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 15:43:14] 2026-02-04 15:42:32,342 | INFO     | collected zombie processes
[2026-02-04 15:43:14] 2026-02-04 15:42:32,342 | INFO     | will attempt to kill all subprocesses of pid=1208474
[2026-02-04 15:43:14] 2026-02-04 15:42:32,524 | INFO     | process IDs to be killed: [1208474] (in reverse order)
[2026-02-04 15:43:14] 2026-02-04 15:42:32,574 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 15:43:14] 2026-02-04 15:42:32,575 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 15:43:14] 2026-02-04 15:42:32,579 | INFO     | did not find any defunct processes belonging to 1208474
[2026-02-04 15:43:14] 2026-02-04 15:42:32,583 | INFO     | did not find any defunct processes belonging to 1208474
[2026-02-04 15:43:14] 2026-02-04 15:42:32,583 | INFO     | ready for new job
[2026-02-04 15:43:14] 2026-02-04 15:42:32,583 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 15:43:14] 2026-02-04 15:42:32,585 | INFO     | **************************************
[2026-02-04 15:43:14] 2026-02-04 15:42:32,586 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 15:43:14] 2026-02-04 15:42:32,586 | INFO     | **************************************
[2026-02-04 15:43:14] 2026-02-04 15:42:32,586 | INFO     | 
[2026-02-04 15:43:14] 2026-02-04 15:42:32,588 | INFO     | architecture information:
[2026-02-04 15:43:14] 2026-02-04 15:42:32,588 | INFO     | executing command: cat /etc/os-release
[2026-02-04 15:43:14] 2026-02-04 15:42:32,601 | INFO     | cat /etc/os-release:
[2026-02-04 15:43:14] NAME="CentOS Linux"
[2026-02-04 15:43:14] VERSION="7 (Core)"
[2026-02-04 15:43:14] ID="centos"
[2026-02-04 15:43:14] ID_LIKE="rhel fedora"
[2026-02-04 15:43:14] VERSION_ID="7"
[2026-02-04 15:43:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 15:43:14] ANSI_COLOR="0;31"
[2026-02-04 15:43:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 15:43:14] HOME_URL="https://www.centos.org/"
[2026-02-04 15:43:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 15:43:14] 
[2026-02-04 15:43:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 15:43:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 15:43:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 15:43:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 15:43:14] 
[2026-02-04 15:43:14] 2026-02-04 15:42:32,601 | INFO     | **************************************
[2026-02-04 15:43:14] 2026-02-04 15:42:33,104 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/0
[2026-02-04 15:43:14] 2026-02-04 15:42:33,120 | INFO     | sufficient remaining disk space (79124496384 B)
[2026-02-04 15:43:14] 2026-02-04 15:42:33,120 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 15:43:14] 2026-02-04 15:42:33,120 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 15:43:14] 2026-02-04 15:42:33,120 | INFO     | update_server=False
[2026-02-04 15:43:14] 2026-02-04 15:42:33,120 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 15:43:14] 2026-02-04 15:42:33,121 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 15:43:14] 2026-02-04 15:42:33,122 | INFO     | aborting loop
[2026-02-04 15:43:14] 2026-02-04 15:42:33,122 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 15:43:14] 2026-02-04 15:42:33,122 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 15:43:14] 2026-02-04 15:42:33,440 | INFO     | all job control threads have been joined
[2026-02-04 15:43:14] 2026-02-04 15:42:33,552 | INFO     | all data control threads have been joined
[2026-02-04 15:43:14] 2026-02-04 15:42:33,962 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 15:43:14] 2026-02-04 15:42:34,126 | INFO     | [job] retrieve thread has finished
[2026-02-04 15:43:14] 2026-02-04 15:42:34,126 | INFO     | [job] queue monitor thread has finished
[2026-02-04 15:43:14] 2026-02-04 15:42:34,127 | INFO     | [job] job monitor thread has finished
[2026-02-04 15:43:14] 2026-02-04 15:42:34,256 | INFO     | all payload control threads have been joined
[2026-02-04 15:43:14] 2026-02-04 15:42:34,416 | INFO     | [job] validate thread has finished
[2026-02-04 15:43:14] 2026-02-04 15:42:34,427 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 15:43:14] 2026-02-04 15:42:34,446 | INFO     | [job] control thread has finished
[2026-02-04 15:43:14] 2026-02-04 15:42:34,558 | INFO     | [data] control thread has finished
[2026-02-04 15:43:14] 2026-02-04 15:42:34,756 | INFO     | [payload] failed_post thread has finished
[2026-02-04 15:43:14] 2026-02-04 15:42:34,814 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 15:43:14] 2026-02-04 15:42:35,091 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 15:43:14] 2026-02-04 15:42:35,261 | INFO     | [payload] control thread has finished
[2026-02-04 15:43:14] 2026-02-04 15:42:35,466 | INFO     | [payload] validate_post thread has finished
[2026-02-04 15:43:14] 2026-02-04 15:42:35,610 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 15:43:14] 2026-02-04 15:42:35,623 | INFO     | [data] copytool_in thread has finished
[2026-02-04 15:43:14] 2026-02-04 15:42:35,967 | INFO     | [data] copytool_out thread has finished
[2026-02-04 15:43:14] 2026-02-04 15:42:37,127 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 15:43:14] 2026-02-04 15:43:03,678 | INFO     | PID=1202516 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-04 15:43:14] 2026-02-04 15:43:03,678 | INFO     | .. there are 4 such processes running
[2026-02-04 15:43:14] 2026-02-04 15:43:03,678 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 15:43:14] 2026-02-04 15:43:03,678 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 15:43:14] 2026-02-04 15:43:03,678 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 15:43:14] 2026-02-04 15:43:09,158 | INFO     | [monitor] cgroup control has ended
[2026-02-04 15:43:14] 2026-02-04 15:43:09,392 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 136140536018752)>', '<ExcThread(monitor, started 136140044621568)>']
[2026-02-04 15:43:14] 2026-02-04 15:43:09,708 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 15:43:14] 2026-02-04 15:43:09,709 | INFO     | [monitor] control thread has ended
[2026-02-04 15:43:14] 2026-02-04 15:43:14,417 | INFO     | all workflow threads have been joined
[2026-02-04 15:43:14] 2026-02-04 15:43:14,418 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 15:43:14] 2026-02-04 15:43:14,418 | INFO     | traces error code: 0
[2026-02-04 15:43:14] 2026-02-04 15:43:14,418 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 15:43:14] 2026-02-04 15:43:14,540 [wrapper] ==== pilot stdout END ====
[2026-02-04 15:43:14] 2026-02-04 15:43:14,543 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 15:43:14] 2026-02-04 15:43:14,546 [wrapper] pilotpid: 1202516
[2026-02-04 15:43:14] 2026-02-04 15:43:14,549 [wrapper] Pilot exit status: 0
[2026-02-04 15:43:14] 2026-02-04 15:43:14,559 [wrapper] pandaids: 6998615371
[2026-02-04 15:43:14] 2026-02-04 15:43:14,594 [wrapper] cleanup supervisor_pilot 1740981 1202517
[2026-02-04 15:43:14] 2026-02-04 15:43:14,597 [wrapper] Test setup, not cleaning
[2026-02-04 15:43:14] 2026-02-04 15:43:14,600 [wrapper] apfmon messages muted
[2026-02-04 15:43:14] 2026-02-04 15:43:14,603 [wrapper] ==== wrapper stdout END ====
[2026-02-04 15:43:14] 2026-02-04 15:43:14,606 [wrapper] ==== wrapper stderr END ====
[2026-02-04 15:43:14]  *** Error codes and diagnostics ***
[2026-02-04 15:43:14]     "exeErrorCode": 0,
[2026-02-04 15:43:14]     "exeErrorDiag": "",
[2026-02-04 15:43:14]     "pilotErrorCode": 0,
[2026-02-04 15:43:14]     "pilotErrorDiag": "",
[2026-02-04 15:43:14]  *** Listing of results directory ***
[2026-02-04 15:43:14] total 940020
[2026-02-04 15:43:14] -rw-r--r-- 1 boinc boinc    584422 Feb  3 05:37 pilot3.tar.gz
[2026-02-04 15:43:14] -rwx------ 1 boinc boinc     36322 Feb  3 05:41 runpilot2-wrapper.sh
[2026-02-04 15:43:14] -rw-r--r-- 1 boinc boinc      5111 Feb  3 05:43 queuedata.json
[2026-02-04 15:43:14] -rw-rw-r-- 1 boinc boinc       100 Feb  4 12:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 15:43:14] -rwxr-xr-x 1 boinc boinc      7986 Feb  4 12:39 run_atlas
[2026-02-04 15:43:14] -rw-rw-r-- 1 boinc boinc       105 Feb  4 12:39 job.xml
[2026-02-04 15:43:14] -rw-r--r-- 2 boinc boinc 671774839 Feb  4 12:39 EVNT.48431094._000093.pool.root.1
[2026-02-04 15:43:14] -rw-r--r-- 2 boinc boinc     15845 Feb  4 12:39 start_atlas.sh
[2026-02-04 15:43:14] drwxrwx--x 2 boinc boinc      4096 Feb  4 12:39 shared
[2026-02-04 15:43:14] -rw-r--r-- 2 boinc boinc    597773 Feb  4 12:39 input.tar.gz
[2026-02-04 15:43:14] -rw-rw-r-- 1 boinc boinc      6156 Feb  4 12:39 init_data.xml
[2026-02-04 15:43:14] -rw-rw-r-- 1 boinc boinc         0 Feb  4 12:39 boinc_setup_complete
[2026-02-04 15:43:14] -rw-rw-r-- 1 boinc boinc         0 Feb  4 12:39 boinc_lockfile
[2026-02-04 15:43:14] -rw-rw-r-- 1 boinc boinc      2554 Feb  4 12:39 pandaJob.out
[2026-02-04 15:43:14] -rw------- 1 boinc boinc   1009228 Feb  4 12:39 agis_schedconf.cvmfs.json
[2026-02-04 15:43:14] -rw------- 1 boinc boinc       426 Feb  4 12:39 workernode_map.json
[2026-02-04 15:43:14] drwx------ 5 boinc boinc      4096 Feb  4 12:39 pilot3
[2026-02-04 15:43:14] -rw------- 1 boinc boinc 282678077 Feb  4 15:41 HITS.48431096._003265.pool.root.1
[2026-02-04 15:43:14] -rw-rw-r-- 1 boinc boinc       531 Feb  4 15:41 boinc_task_state.xml
[2026-02-04 15:43:14] -rw------- 1 boinc boinc      1038 Feb  4 15:42 memory_monitor_summary.json
[2026-02-04 15:43:14] -rw------- 1 boinc boinc        95 Feb  4 15:42 pilot_heartbeat.json
[2026-02-04 15:43:14] -rw------- 1 boinc boinc   1511668 Feb  4 15:42 agis_ddmendpoints.agis.ALL.json
[2026-02-04 15:43:14] -rw------- 1 boinc boinc    507601 Feb  4 15:42 log.48431096._003265.job.log.tgz.1
[2026-02-04 15:43:14] -rw------- 1 boinc boinc      6329 Feb  4 15:42 heartbeat.json
[2026-02-04 15:43:14] -rw-rw-r-- 1 boinc boinc      8192 Feb  4 15:43 boinc_mmap_file
[2026-02-04 15:43:14] -rw-rw-r-- 1 boinc boinc        28 Feb  4 15:43 wrapper_checkpoint.txt
[2026-02-04 15:43:14] -rw------- 1 boinc boinc      4842 Feb  4 15:43 pilotlog.txt
[2026-02-04 15:43:14] -rw------- 1 boinc boinc   1586509 Feb  4 15:43 log.48431096._003265.job.log.1
[2026-02-04 15:43:14] -rw------- 1 boinc boinc       357 Feb  4 15:43 output.list
[2026-02-04 15:43:14] -rw-rw-r-- 1 boinc boinc       620 Feb  4 15:43 runtime_log
[2026-02-04 15:43:14] -rw------- 1 boinc boinc   2109440 Feb  4 15:43 result.tar.gz
[2026-02-04 15:43:14] -rw------- 1 boinc boinc       655 Feb  4 15:43 x1wNDm8KO78n9Rq4apOajLDm4fhM0noT9bVooX4SDmr4TKDm005f2n.diag
[2026-02-04 15:43:14] -rw-rw-r-- 1 boinc boinc      9172 Feb  4 15:43 runtime_log.err
[2026-02-04 15:43:14] -rw-rw-r-- 1 boinc boinc     20833 Feb  4 15:43 stderr.txt
[2026-02-04 15:43:14] HITS file was successfully produced:
[2026-02-04 15:43:14] -rw------- 1 boinc boinc 282678077 Feb  4 15:41 shared/HITS.pool.root.1
[2026-02-04 15:43:14]  *** Contents of shared directory: ***
[2026-02-04 15:43:14] total 934756
[2026-02-04 15:43:14] -rw-r--r-- 2 boinc boinc 671774839 Feb  4 12:39 ATLAS.root_0
[2026-02-04 15:43:14] -rw-r--r-- 2 boinc boinc     15845 Feb  4 12:39 start_atlas.sh
[2026-02-04 15:43:14] -rw-r--r-- 2 boinc boinc    597773 Feb  4 12:39 input.tar.gz
[2026-02-04 15:43:14] -rw------- 1 boinc boinc 282678077 Feb  4 15:41 HITS.pool.root.1
[2026-02-04 15:43:14] -rw------- 1 boinc boinc   2109440 Feb  4 15:43 result.tar.gz
15:43:15 (1197271): run_atlas exited; CPU time 83615.727839
15:43:15 (1197271): called boinc_finish(0)

</stderr_txt>
]]>

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