Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
19:15:23 (1234440): wrapper (7.7.26015): starting
19:15:23 (1234440): wrapper: running run_atlas (--nthreads 4)
[2026-02-03 19:15:23] Arguments: --nthreads 4
[2026-02-03 19:15:23] Threads: 4
[2026-02-03 19:15:23] Checking for CVMFS
[2026-02-03 19:15:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-03 19:15:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-03 19:15:25] Running cvmfs_config stat atlas.cern.ch
[2026-02-03 19:15:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-03 19:15:25] 2.13.3.0 3729 9238 59220 155852 2 50 3260698 6144001 2769 130560 0 16590051 99.996 318159 995 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-02-03 19:15:25] CVMFS is ok
[2026-02-03 19:15:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-03 19:15:25] Small home clusters do not require a local http proxy but it is suggested if
[2026-02-03 19:15:25] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-02-03 19:15:25] Further information can be found at the LHC@home message board.
[2026-02-03 19:15:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 19:15:25] Checking for apptainer binary...
[2026-02-03 19:15:25] apptainer is not installed, using version from CVMFS
[2026-02-03 19:15:25] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 19:15:25] ubuntu-vm
[2026-02-03 19:15:25] apptainer works
[2026-02-03 19:15:25] Set ATHENA_PROC_NUMBER=4
[2026-02-03 19:15:25] Set ATHENA_CORE_NUMBER=4
[2026-02-03 19:15:25] Starting ATLAS job with PandaID=6998619774
[2026-02-03 19:15:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/mnt/boinc/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-03 21:17:58]  *** The last 200 lines of the pilot log: ***
[2026-02-03 21:17:58] 2026-02-04 05:17:25,385 | INFO     | preparing for final server update for job 6998619774 in state='finished'
[2026-02-03 21:17:58] 2026-02-04 05:17:25,385 | INFO     | reading metadata from: /mnt/boinc/boinc-client/slots/3/PanDA_Pilot-6998619774/jobReport.json
[2026-02-03 21:17:58] 2026-02-04 05:17:25,386 | INFO     | added worker_node to metadata from /mnt/boinc/boinc-client/slots/3/workernode_map.json
[2026-02-03 21:17:58] 2026-02-04 05:17:25,386 | INFO     | this job has now completed (state=finished)
[2026-02-03 21:17:58] 2026-02-04 05:17:25,386 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-03 21:17:58] 2026-02-04 05:17:25,386 | INFO     | log transfer has been attempted: DONE
[2026-02-03 21:17:58] 2026-02-04 05:17:25,386 | INFO     | job 6998619774 has finished - writing final server update
[2026-02-03 21:17:58] 2026-02-04 05:17:25,387 | INFO     | total number of processed events: 400 (read)
[2026-02-03 21:17:58] 2026-02-04 05:17:25,388 | INFO     | using path: /mnt/boinc/boinc-client/slots/3/PanDA_Pilot-6998619774/memory_monitor_summary.json (trf name=prmon)
[2026-02-03 21:17:58] 2026-02-04 05:17:25,389 | INFO     | extracted standard info from prmon json
[2026-02-03 21:17:58] 2026-02-04 05:17:25,389 | INFO     | extracted standard memory fields from prmon json
[2026-02-03 21:17:58] 2026-02-04 05:17:25,389 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-03 21:17:58] 2026-02-04 05:17:25,389 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-03 21:17:58] 2026-02-04 05:17:25,389 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-03 21:17:58] 2026-02-04 05:17:25,390 | INFO     | fitting pss+swap vs Time
[2026-02-03 21:17:58] 2026-02-04 05:17:25,390 | INFO     | sum of square deviations: 535786790.0
[2026-02-03 21:17:58] 2026-02-04 05:17:25,390 | INFO     | sum of deviations: -4686202.999998376
[2026-02-03 21:17:58] 2026-02-04 05:17:25,390 | INFO     | mean x: 1770178586.5
[2026-02-03 21:17:58] 2026-02-04 05:17:25,390 | INFO     | mean y: 2426999.1
[2026-02-03 21:17:58] 2026-02-04 05:17:25,390 | INFO     | intersect: 17909680.564746797
[2026-02-03 21:17:58] 2026-02-04 05:17:25,391 | INFO     | chi2: 1.104800723544573
[2026-02-03 21:17:58] 2026-02-04 05:17:25,391 | INFO     | sum of square deviations: 471562330.0
[2026-02-03 21:17:58] 2026-02-04 05:17:25,391 | INFO     | sum of deviations: 244339160.00000164
[2026-02-03 21:17:58] 2026-02-04 05:17:25,391 | INFO     | mean x: 1770178434.0
[2026-02-03 21:17:58] 2026-02-04 05:17:25,391 | INFO     | mean y: 2427607.269565217
[2026-02-03 21:17:58] 2026-02-04 05:17:25,391 | INFO     | intersect: -914787115.148314
[2026-02-03 21:17:58] 2026-02-04 05:17:25,391 | INFO     | chi2: 1.1052007347711281
[2026-02-03 21:17:58] 2026-02-04 05:17:25,391 | INFO     | current chi2=1.1052007347711281 (change=-0.0362066405307761 %)
[2026-02-03 21:17:58] 2026-02-04 05:17:25,391 | INFO     | right removable region: 114
[2026-02-03 21:17:58] 2026-02-04 05:17:25,391 | INFO     | sum of square deviations: 471562330.0
[2026-02-03 21:17:58] 2026-02-04 05:17:25,392 | INFO     | sum of deviations: -11261814387.999992
[2026-02-03 21:17:58] 2026-02-04 05:17:25,392 | INFO     | mean x: 1770178739.0
[2026-02-03 21:17:58] 2026-02-04 05:17:25,392 | INFO     | mean y: 2453011.7391304346
[2026-02-03 21:17:58] 2026-02-04 05:17:25,392 | INFO     | intersect: 42277722099.07671
[2026-02-03 21:17:58] 2026-02-04 05:17:25,392 | INFO     | chi2: 0.023704245763976978
[2026-02-03 21:17:58] 2026-02-04 05:17:25,392 | INFO     | current chi2=0.023704245763976978 (change=97.85443245475747 %)
[2026-02-03 21:17:58] 2026-02-04 05:17:25,392 | INFO     | sum of square deviations: 412686807.5
[2026-02-03 21:17:58] 2026-02-04 05:17:25,392 | INFO     | sum of deviations: -10647720464.5
[2026-02-03 21:17:58] 2026-02-04 05:17:25,392 | INFO     | mean x: 1770178891.5
[2026-02-03 21:17:58] 2026-02-04 05:17:25,392 | INFO     | mean y: 2451415.3
[2026-02-03 21:17:58] 2026-02-04 05:17:25,392 | INFO     | intersect: 45674786140.58796
[2026-02-03 21:17:58] 2026-02-04 05:17:25,392 | INFO     | chi2: 0.02176753958741147
[2026-02-03 21:17:58] 2026-02-04 05:17:25,392 | INFO     | current chi2=0.02176753958741147 (change=8.170292342769644 %)
[2026-02-03 21:17:58] 2026-02-04 05:17:25,392 | INFO     | left removable region: 20
[2026-02-03 21:17:58] 2026-02-04 05:17:25,392 | INFO     | sum of square deviations: 257521107.5
[2026-02-03 21:17:58] 2026-02-04 05:17:25,392 | INFO     | sum of deviations: -8153127691.000003
[2026-02-03 21:17:58] 2026-02-04 05:17:25,392 | INFO     | mean x: 1770179013.5
[2026-02-03 21:17:58] 2026-02-04 05:17:25,392 | INFO     | mean y: 2448096.85106383
[2026-02-03 21:17:58] 2026-02-04 05:17:25,393 | INFO     | intersect: 56046380468.46809
[2026-02-03 21:17:58] 2026-02-04 05:17:25,393 | INFO     | chi2: 0.01709996362838882
[2026-02-03 21:17:58] 2026-02-04 05:17:25,393 | INFO     | current memory leak: -31.66 B/s (using 94 data points, chi2=0.02)
[2026-02-03 21:17:58] 2026-02-04 05:17:25,393 | INFO     | could have reported an average CPU frequency of 4199 MHz (8 samples)
[2026-02-03 21:17:58] 2026-02-04 05:17:25,393 | INFO     | ..............................
[2026-02-03 21:17:58] 2026-02-04 05:17:25,393 | INFO     | . Timing measurements:
[2026-02-03 21:17:58] 2026-02-04 05:17:25,393 | INFO     | . get job = 0 s
[2026-02-03 21:17:58] 2026-02-04 05:17:25,393 | INFO     | . initial setup = 5 s
[2026-02-03 21:17:58] 2026-02-04 05:17:25,393 | INFO     | . payload setup = 3 s
[2026-02-03 21:17:58] 2026-02-04 05:17:25,393 | INFO     | . stage-in = 0 s
[2026-02-03 21:17:58] 2026-02-04 05:17:25,393 | INFO     | . payload execution = 7284 s
[2026-02-03 21:17:58] 2026-02-04 05:17:25,393 | INFO     | . stage-out = 0 s
[2026-02-03 21:17:58] 2026-02-04 05:17:25,393 | INFO     | . log creation = 0 s
[2026-02-03 21:17:58] 2026-02-04 05:17:25,393 | INFO     | ..............................
[2026-02-03 21:17:58] 2026-02-04 05:17:25,914 | INFO     | 
[2026-02-03 21:17:58] 2026-02-04 05:17:25,915 | INFO     | job summary report
[2026-02-03 21:17:58] 2026-02-04 05:17:25,915 | INFO     | --------------------------------------------------
[2026-02-03 21:17:58] 2026-02-04 05:17:25,915 | INFO     | PanDA job id: 6998619774
[2026-02-03 21:17:58] 2026-02-04 05:17:25,915 | INFO     | task id: 48431096
[2026-02-03 21:17:58] 2026-02-04 05:17:25,915 | INFO     | errors: (none)
[2026-02-03 21:17:58] 2026-02-04 05:17:25,915 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-03 21:17:58] 2026-02-04 05:17:25,915 | INFO     | pilot state: finished 
[2026-02-03 21:17:58] 2026-02-04 05:17:25,915 | INFO     | transexitcode: 0
[2026-02-03 21:17:58] 2026-02-04 05:17:25,915 | INFO     | exeerrorcode: 0
[2026-02-03 21:17:58] 2026-02-04 05:17:25,915 | INFO     | exeerrordiag: 
[2026-02-03 21:17:58] 2026-02-04 05:17:25,915 | INFO     | exitcode: 0
[2026-02-03 21:17:58] 2026-02-04 05:17:25,915 | INFO     | exitmsg: OK
[2026-02-03 21:17:58] 2026-02-04 05:17:25,915 | INFO     | cpuconsumptiontime: 28127 s
[2026-02-03 21:17:58] 2026-02-04 05:17:25,915 | INFO     | nevents: 400
[2026-02-03 21:17:58] 2026-02-04 05:17:25,915 | INFO     | neventsw: 0
[2026-02-03 21:17:58] 2026-02-04 05:17:25,915 | INFO     | pid: 1243041
[2026-02-03 21:17:58] 2026-02-04 05:17:25,915 | INFO     | pgrp: 1243041
[2026-02-03 21:17:58] 2026-02-04 05:17:25,915 | INFO     | corecount: 4
[2026-02-03 21:17:58] 2026-02-04 05:17:25,915 | INFO     | event service: False
[2026-02-03 21:17:58] 2026-02-04 05:17:25,915 | INFO     | sizes: {0: 2277840, 1: 2278301, 11: 2278301, 7292: 2305823, 7293: 2314895, 7295: 2315033}
[2026-02-03 21:17:58] 2026-02-04 05:17:25,915 | INFO     | --------------------------------------------------
[2026-02-03 21:17:58] 2026-02-04 05:17:25,915 | INFO     | 
[2026-02-03 21:17:58] 2026-02-04 05:17:25,915 | INFO     | executing command: ls -lF /mnt/boinc/boinc-client/slots/3
[2026-02-03 21:17:58] 2026-02-04 05:17:25,954 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-03 21:17:58] 2026-02-04 05:17:25,954 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-03 21:17:58] 2026-02-04 05:17:25,954 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-03 21:17:58] 2026-02-04 05:17:25,954 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-03 21:17:58] 2026-02-04 05:17:25,954 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-03 21:17:58] 2026-02-04 05:17:25,954 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-03 21:17:58] 2026-02-04 05:17:25,954 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-03 21:17:58] 2026-02-04 05:17:25,954 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-03 21:17:58] 2026-02-04 05:17:25,954 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-03 21:17:58] 2026-02-04 05:17:25,954 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-03 21:17:58] 2026-02-04 05:17:25,954 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-03 21:17:58] 2026-02-04 05:17:25,954 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-03 21:17:58] 2026-02-04 05:17:25,954 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-03 21:17:58] 2026-02-04 05:17:25,954 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-03 21:17:58] 2026-02-04 05:17:25,954 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-03 21:17:58] 2026-02-04 05:17:25,954 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-03 21:17:58] 2026-02-04 05:17:25,954 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-03 21:17:58] 2026-02-04 05:17:25,954 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-03 21:17:58] 2026-02-04 05:17:25,954 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-03 21:17:58] 2026-02-04 05:17:25,954 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-03 21:17:58] 2026-02-04 05:17:25,954 | INFO     | job 6998619774 has completed (purged errors)
[2026-02-03 21:17:58] 2026-02-04 05:17:25,954 | INFO     | overall cleanup function is called
[2026-02-03 21:17:58] 2026-02-04 05:17:26,962 | INFO     | --- collectZombieJob: --- 10, [1243041]
[2026-02-03 21:17:58] 2026-02-04 05:17:26,962 | INFO     | zombie collector waiting for pid 1243041
[2026-02-03 21:17:58] 2026-02-04 05:17:26,962 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-03 21:17:58] 2026-02-04 05:17:26,962 | INFO     | collected zombie processes
[2026-02-03 21:17:58] 2026-02-04 05:17:26,962 | INFO     | will attempt to kill all subprocesses of pid=1243041
[2026-02-03 21:17:58] 2026-02-04 05:17:27,034 | INFO     | process IDs to be killed: [1243041] (in reverse order)
[2026-02-03 21:17:58] 2026-02-04 05:17:27,120 | WARNING  | found no corresponding commands to process id(s)
[2026-02-03 21:17:58] 2026-02-04 05:17:27,121 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-03 21:17:58] 2026-02-04 05:17:27,123 | INFO     | did not find any defunct processes belonging to 1243041
[2026-02-03 21:17:58] 2026-02-04 05:17:27,125 | INFO     | did not find any defunct processes belonging to 1243041
[2026-02-03 21:17:58] 2026-02-04 05:17:27,125 | INFO     | ready for new job
[2026-02-03 21:17:58] 2026-02-04 05:17:27,125 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-03 21:17:58] 2026-02-04 05:17:27,126 | INFO     | **************************************
[2026-02-03 21:17:58] 2026-02-04 05:17:27,126 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-03 21:17:58] 2026-02-04 05:17:27,126 | INFO     | **************************************
[2026-02-03 21:17:58] 2026-02-04 05:17:27,127 | INFO     | 
[2026-02-03 21:17:58] 2026-02-04 05:17:27,127 | INFO     | pilot is running in a VM
[2026-02-03 21:17:58] 2026-02-04 05:17:27,127 | INFO     | architecture information:
[2026-02-03 21:17:58] 2026-02-04 05:17:27,127 | INFO     | executing command: cat /etc/os-release
[2026-02-03 21:17:58] 2026-02-04 05:17:27,140 | INFO     | cat /etc/os-release:
[2026-02-03 21:17:58] NAME="CentOS Linux"
[2026-02-03 21:17:58] VERSION="7 (Core)"
[2026-02-03 21:17:58] ID="centos"
[2026-02-03 21:17:58] ID_LIKE="rhel fedora"
[2026-02-03 21:17:58] VERSION_ID="7"
[2026-02-03 21:17:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-03 21:17:58] ANSI_COLOR="0;31"
[2026-02-03 21:17:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-03 21:17:58] HOME_URL="https://www.centos.org/"
[2026-02-03 21:17:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-03 21:17:58] 
[2026-02-03 21:17:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-03 21:17:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-03 21:17:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-03 21:17:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-03 21:17:58] 
[2026-02-03 21:17:58] 2026-02-04 05:17:27,140 | INFO     | **************************************
[2026-02-03 21:17:58] 2026-02-04 05:17:27,644 | INFO     | executing command: df -mP /mnt/boinc/boinc-client/slots/3
[2026-02-03 21:17:58] 2026-02-04 05:17:27,661 | INFO     | sufficient remaining disk space (39370883072 B)
[2026-02-03 21:17:58] 2026-02-04 05:17:27,662 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-03 21:17:58] 2026-02-04 05:17:27,662 | INFO     | current server update state: UPDATING_FINAL
[2026-02-03 21:17:58] 2026-02-04 05:17:27,662 | INFO     | update_server=False
[2026-02-03 21:17:58] 2026-02-04 05:17:27,662 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-03 21:17:58] 2026-02-04 05:17:27,912 | INFO     | all data control threads have been joined
[2026-02-03 21:17:58] 2026-02-04 05:17:27,916 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-03 21:17:58] 2026-02-04 05:17:27,916 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-03 21:17:58] 2026-02-04 05:17:27,916 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-03 21:17:58] 2026-02-04 05:17:27,916 | INFO     | will abort loop
[2026-02-03 21:17:58] 2026-02-04 05:17:28,534 | INFO     | all payload control threads have been joined
[2026-02-03 21:17:58] 2026-02-04 05:17:28,668 | INFO     | [job] retrieve thread has finished
[2026-02-03 21:17:58] 2026-02-04 05:17:28,844 | INFO     | [payload] validate_pre thread has finished
[2026-02-03 21:17:58] 2026-02-04 05:17:28,848 | INFO     | [data] copytool_in thread has finished
[2026-02-03 21:17:58] 2026-02-04 05:17:28,875 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-03 21:17:58] 2026-02-04 05:17:28,918 | INFO     | [data] control thread has finished
[2026-02-03 21:17:58] 2026-02-04 05:17:28,921 | INFO     | [job] job monitor thread has finished
[2026-02-03 21:17:58] 2026-02-04 05:17:29,071 | INFO     | all job control threads have been joined
[2026-02-03 21:17:58] 2026-02-04 05:17:29,127 | INFO     | [payload] execute_payloads thread has finished
[2026-02-03 21:17:58] 2026-02-04 05:17:29,393 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-03 21:17:58] 2026-02-04 05:17:29,539 | INFO     | [payload] control thread has finished
[2026-02-03 21:17:58] 2026-02-04 05:17:29,572 | INFO     | [payload] validate_post thread has finished
[2026-02-03 21:17:58] 2026-02-04 05:17:29,891 | INFO     | [payload] failed_post thread has finished
[2026-02-03 21:17:58] 2026-02-04 05:17:30,047 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-03 21:17:58] 2026-02-04 05:17:30,077 | INFO     | [job] control thread has finished
[2026-02-03 21:17:58] 2026-02-04 05:17:30,110 | INFO     | [job] validate thread has finished
[2026-02-03 21:17:58] 2026-02-04 05:17:30,147 | INFO     | [job] create_data_payload thread has finished
[2026-02-03 21:17:58] 2026-02-04 05:17:30,444 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-03 21:17:58] 2026-02-04 05:17:30,883 | INFO     | [data] copytool_out thread has finished
[2026-02-03 21:17:58] 2026-02-04 05:17:31,450 | INFO     | [job] queue monitor thread has finished
[2026-02-03 21:17:58] 2026-02-04 05:17:33,398 | INFO     | [data] queue_monitor thread has finished
[2026-02-03 21:17:58] 2026-02-04 05:17:51,420 | INFO     | [monitor] cgroup control has ended
[2026-02-03 21:17:58] 2026-02-04 05:17:53,463 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 136246714357568)>', '<ExcThread(monitor, started 136245925623552)>']
[2026-02-03 21:17:58] 2026-02-04 05:17:58,083 | INFO     | PID=1238557 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-03 21:17:58] 2026-02-04 05:17:58,083 | INFO     | .. there are 4 such processes running
[2026-02-03 21:17:58] 2026-02-04 05:17:58,083 | INFO     | found 0 job(s) in 20 queues
[2026-02-03 21:17:58] 2026-02-04 05:17:58,083 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-03 21:17:58] 2026-02-04 05:17:58,083 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-03 21:17:58] 2026-02-04 05:17:58,083 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-03 21:17:58] 2026-02-04 05:17:58,083 | INFO     | [monitor] control thread has ended
[2026-02-03 21:17:58] 2026-02-04 05:17:58,485 | INFO     | all workflow threads have been joined
[2026-02-03 21:17:58] 2026-02-04 05:17:58,486 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-03 21:17:58] 2026-02-04 05:17:58,486 | INFO     | traces error code: 0
[2026-02-03 21:17:58] 2026-02-04 05:17:58,486 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-03 21:17:58] 2026-02-04 05:17:58,561 [wrapper] ==== pilot stdout END ====
[2026-02-03 21:17:58] 2026-02-04 05:17:58,564 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-03 21:17:58] 2026-02-04 05:17:58,566 [wrapper] pilotpid: 1238557
[2026-02-03 21:17:58] 2026-02-04 05:17:58,569 [wrapper] Pilot exit status: 0
[2026-02-03 21:17:58] 2026-02-04 05:17:58,578 [wrapper] pandaids: 6998619774
[2026-02-03 21:17:58] 2026-02-04 05:17:58,609 [wrapper] cleanup supervisor_pilot 1288340 1238558
[2026-02-03 21:17:58] 2026-02-04 05:17:58,623 [wrapper] Test setup, not cleaning
[2026-02-03 21:17:58] 2026-02-04 05:17:58,635 [wrapper] apfmon messages muted
[2026-02-03 21:17:58] 2026-02-04 05:17:58,645 [wrapper] ==== wrapper stdout END ====
[2026-02-03 21:17:58] 2026-02-04 05:17:58,648 [wrapper] ==== wrapper stderr END ====
[2026-02-03 21:17:58]  *** Error codes and diagnostics ***
[2026-02-03 21:17:58]     "exeErrorCode": 0,
[2026-02-03 21:17:58]     "exeErrorDiag": "",
[2026-02-03 21:17:58]     "pilotErrorCode": 0,
[2026-02-03 21:17:58]     "pilotErrorDiag": "",
[2026-02-03 21:17:58]  *** Listing of results directory ***
[2026-02-03 21:17:58] total 938892
[2026-02-03 21:17:58] -rw-r--r-- 1 boinc boinc    584422 Feb  2 21:37 pilot3.tar.gz
[2026-02-03 21:17:58] -rwx------ 1 boinc boinc     36322 Feb  2 21:39 runpilot2-wrapper.sh
[2026-02-03 21:17:58] -rw-r--r-- 1 boinc boinc      5111 Feb  2 21:39 queuedata.json
[2026-02-03 21:17:58] -rw-r--r-- 1 boinc boinc       100 Feb  3 19:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-03 21:17:58] -rwxr-xr-x 1 boinc boinc      7986 Feb  3 19:15 run_atlas
[2026-02-03 21:17:58] -rw-r--r-- 1 boinc boinc       105 Feb  3 19:15 job.xml
[2026-02-03 21:17:58] -rw-r--r-- 2 boinc boinc 674097597 Feb  3 19:15 EVNT.48431094._000102.pool.root.1
[2026-02-03 21:17:58] drwxrwx--x 2 boinc boinc      4096 Feb  3 19:15 shared
[2026-02-03 21:17:58] -rw-r--r-- 2 boinc boinc    597759 Feb  3 19:15 input.tar.gz
[2026-02-03 21:17:58] -rw-r--r-- 2 boinc boinc     15845 Feb  3 19:15 start_atlas.sh
[2026-02-03 21:17:58] -rw-r--r-- 1 boinc boinc         0 Feb  3 19:15 boinc_setup_complete
[2026-02-03 21:17:58] -rw-r--r-- 1 boinc boinc      6869 Feb  3 19:15 init_data.xml
[2026-02-03 21:17:58] -rw-r--r-- 1 boinc boinc         0 Feb  3 19:15 boinc_lockfile
[2026-02-03 21:17:58] -rw-r--r-- 1 boinc boinc      2553 Feb  3 19:15 pandaJob.out
[2026-02-03 21:17:58] -rw------- 1 boinc boinc   1009244 Feb  3 19:15 agis_schedconf.cvmfs.json
[2026-02-03 21:17:58] -rw------- 1 boinc boinc   1511668 Feb  3 19:15 agis_ddmendpoints.agis.ALL.json
[2026-02-03 21:17:58] -rw------- 1 boinc boinc       424 Feb  3 19:15 workernode_map.json
[2026-02-03 21:17:58] drwx------ 5 boinc boinc      4096 Feb  3 19:15 pilot3
[2026-02-03 21:17:58] -rw------- 1 boinc boinc 280609635 Feb  3 21:16 HITS.48431096._003695.pool.root.1
[2026-02-03 21:17:58] -rw------- 1 boinc boinc        95 Feb  3 21:17 pilot_heartbeat.json
[2026-02-03 21:17:58] -rw------- 1 boinc boinc      1019 Feb  3 21:17 memory_monitor_summary.json
[2026-02-03 21:17:58] -rw------- 1 boinc boinc    314569 Feb  3 21:17 log.48431096._003695.job.log.tgz.1
[2026-02-03 21:17:58] -rw-r--r-- 1 boinc boinc       530 Feb  3 21:17 boinc_task_state.xml
[2026-02-03 21:17:58] -rw------- 1 boinc boinc      6285 Feb  3 21:17 heartbeat.json
[2026-02-03 21:17:58] -rw-r--r-- 1 boinc boinc        27 Feb  3 21:17 wrapper_checkpoint.txt
[2026-02-03 21:17:58] -rw-r--r-- 1 boinc boinc      8192 Feb  3 21:17 boinc_mmap_file
[2026-02-03 21:17:58] -rw------- 1 boinc boinc      5076 Feb  3 21:17 pilotlog.txt
[2026-02-03 21:17:58] -rw------- 1 boinc boinc   1074365 Feb  3 21:17 log.48431096._003695.job.log.1
[2026-02-03 21:17:58] -rw------- 1 boinc boinc       357 Feb  3 21:17 output.list
[2026-02-03 21:17:58] -rw-r--r-- 1 boinc boinc       620 Feb  3 21:17 runtime_log
[2026-02-03 21:17:58] -rw------- 1 boinc boinc   1402880 Feb  3 21:17 result.tar.gz
[2026-02-03 21:17:58] -rw-r--r-- 1 boinc boinc      8954 Feb  3 21:17 runtime_log.err
[2026-02-03 21:17:58] -rw------- 1 boinc boinc       652 Feb  3 21:17 1BqNDmAJO78n9Rq4apOajLDm4fhM0noT9bVooX4SDmY2TKDm7ToDNn.diag
[2026-02-03 21:17:58] -rw-r--r-- 1 boinc boinc     21336 Feb  3 21:17 stderr.txt
[2026-02-03 21:17:58] HITS file was successfully produced:
[2026-02-03 21:17:58] -rw------- 1 boinc boinc 280609635 Feb  3 21:16 shared/HITS.pool.root.1
[2026-02-03 21:17:58]  *** Contents of shared directory: ***
[2026-02-03 21:17:58] total 934316
[2026-02-03 21:17:58] -rw-r--r-- 2 boinc boinc 674097597 Feb  3 19:15 ATLAS.root_0
[2026-02-03 21:17:58] -rw-r--r-- 2 boinc boinc    597759 Feb  3 19:15 input.tar.gz
[2026-02-03 21:17:58] -rw-r--r-- 2 boinc boinc     15845 Feb  3 19:15 start_atlas.sh
[2026-02-03 21:17:58] -rw------- 1 boinc boinc 280609635 Feb  3 21:16 HITS.pool.root.1
[2026-02-03 21:17:58] -rw------- 1 boinc boinc   1402880 Feb  3 21:17 result.tar.gz
21:18:00 (1234440): run_atlas exited; CPU time 28109.989914
21:18:00 (1234440): called boinc_finish(0)

</stderr_txt>
]]>

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