Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:56:44 (3877654): wrapper (7.7.26015): starting
03:56:44 (3877654): wrapper: running run_atlas (--nthreads 6)
[2026-02-04 03:56:44] Arguments: --nthreads 6
[2026-02-04 03:56:44] Threads: 6
[2026-02-04 03:56:44] Checking for CVMFS
[2026-02-04 03:56:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-04 03:57:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-04 03:57:12] Running cvmfs_config stat atlas.cern.ch
[2026-02-04 03:57:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-04 03:57:13] 2.13.3.0 3793838 701 63140 155840 2 50 14982215 20971521 929 130560 0 280289 99.981 25566 14 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-02-04 03:57:13] CVMFS is ok
[2026-02-04 03:57:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 03:57:13] Checking for apptainer binary...
[2026-02-04 03:57:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-04 03:57:13] Running /usr/bin/apptainer --version
[2026-02-04 03:57:13] apptainer version 1.4.5-2.el9
[2026-02-04 03:57:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 03:57:13] testio005
[2026-02-04 03:57:13] apptainer works
[2026-02-04 03:57:13] Set ATHENA_PROC_NUMBER=6
[2026-02-04 03:57:13] Set ATHENA_CORE_NUMBER=6
[2026-02-04 03:57:13] Starting ATLAS job with PandaID=6998622863
[2026-02-04 03:57:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 06:34:02]  *** The last 200 lines of the pilot log: ***
[2026-02-04 06:34:02] 2026-02-03 21:32:59,865 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-04 06:34:02] 2026-02-03 21:32:59,865 | INFO     | log transfer has been attempted: DONE
[2026-02-04 06:34:02] 2026-02-03 21:32:59,865 | INFO     | job 6998622863 has finished - writing final server update
[2026-02-04 06:34:02] 2026-02-03 21:32:59,865 | INFO     | total number of processed events: 400 (read)
[2026-02-04 06:34:02] 2026-02-03 21:32:59,868 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6998622863/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 06:34:02] 2026-02-03 21:32:59,869 | INFO     | extracted standard info from prmon json
[2026-02-04 06:34:02] 2026-02-03 21:32:59,869 | INFO     | extracted standard memory fields from prmon json
[2026-02-04 06:34:02] 2026-02-03 21:32:59,869 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-04 06:34:02] 2026-02-03 21:32:59,869 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-04 06:34:02] 2026-02-03 21:32:59,869 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-04 06:34:02] 2026-02-03 21:32:59,872 | INFO     | fitting pss+swap vs Time
[2026-02-04 06:34:02] 2026-02-03 21:32:59,872 | INFO     | sum of square deviations: 1088905998.0
[2026-02-04 06:34:02] 2026-02-03 21:32:59,873 | INFO     | sum of deviations: 9402242075.999994
[2026-02-04 06:34:02] 2026-02-03 21:32:59,873 | INFO     | mean x: 1770149750.5
[2026-02-04 06:34:02] 2026-02-03 21:32:59,873 | INFO     | mean y: 2475551.486842105
[2026-02-04 06:34:02] 2026-02-03 21:32:59,873 | INFO     | intersect: -15282017779.931093
[2026-02-04 06:34:02] 2026-02-03 21:32:59,873 | INFO     | chi2: 2.2101551549298835
[2026-02-04 06:34:02] 2026-02-03 21:32:59,873 | INFO     | sum of square deviations: 984941258.0
[2026-02-04 06:34:02] 2026-02-03 21:32:59,874 | INFO     | sum of deviations: 18447800377.0
[2026-02-04 06:34:02] 2026-02-03 21:32:59,874 | INFO     | mean x: 1770149598.0
[2026-02-04 06:34:02] 2026-02-03 21:32:59,874 | INFO     | mean y: 2488453.523809524
[2026-02-04 06:34:02] 2026-02-03 21:32:59,874 | INFO     | intersect: -33152145039.68579
[2026-02-04 06:34:02] 2026-02-03 21:32:59,875 | INFO     | chi2: 1.5414770996652578
[2026-02-04 06:34:02] 2026-02-03 21:32:59,875 | INFO     | current chi2=1.5414770996652578 (change=30.254801513509094 %)
[2026-02-04 06:34:02] 2026-02-03 21:32:59,875 | INFO     | sum of square deviations: 887813855.5
[2026-02-04 06:34:02] 2026-02-03 21:32:59,876 | INFO     | sum of deviations: 17939022740.000004
[2026-02-04 06:34:02] 2026-02-03 21:32:59,876 | INFO     | mean x: 1770149445.5
[2026-02-04 06:34:02] 2026-02-03 21:32:59,876 | INFO     | mean y: 2487654.323943662
[2026-02-04 06:34:02] 2026-02-03 21:32:59,876 | INFO     | intersect: -35764864881.68623
[2026-02-04 06:34:02] 2026-02-03 21:32:59,876 | INFO     | chi2: 1.543130219967427
[2026-02-04 06:34:02] 2026-02-03 21:32:59,876 | INFO     | current chi2=1.543130219967427 (change=-0.10724261181228241 %)
[2026-02-04 06:34:02] 2026-02-03 21:32:59,876 | INFO     | right removable region: 141
[2026-02-04 06:34:02] 2026-02-03 21:32:59,877 | INFO     | sum of square deviations: 984941258.0
[2026-02-04 06:34:02] 2026-02-03 21:32:59,877 | INFO     | sum of deviations: -14376842706.000002
[2026-02-04 06:34:02] 2026-02-03 21:32:59,877 | INFO     | mean x: 1770149903.0
[2026-02-04 06:34:02] 2026-02-03 21:32:59,877 | INFO     | mean y: 2509908.095238095
[2026-02-04 06:34:02] 2026-02-03 21:32:59,877 | INFO     | intersect: 25840768296.3657
[2026-02-04 06:34:02] 2026-02-03 21:32:59,878 | INFO     | chi2: 0.697643609379314
[2026-02-04 06:34:02] 2026-02-03 21:32:59,878 | INFO     | current chi2=0.697643609379314 (change=68.43463193870448 %)
[2026-02-04 06:34:02] 2026-02-03 21:32:59,878 | INFO     | sum of square deviations: 887813855.5
[2026-02-04 06:34:02] 2026-02-03 21:32:59,879 | INFO     | sum of deviations: -13611136393.5
[2026-02-04 06:34:02] 2026-02-03 21:32:59,879 | INFO     | mean x: 1770150055.5
[2026-02-04 06:34:02] 2026-02-03 21:32:59,879 | INFO     | mean y: 2508712.1619718308
[2026-02-04 06:34:02] 2026-02-03 21:32:59,879 | INFO     | intersect: 27140803179.0837
[2026-02-04 06:34:02] 2026-02-03 21:32:59,879 | INFO     | chi2: 0.697433144471584
[2026-02-04 06:34:02] 2026-02-03 21:32:59,879 | INFO     | current chi2=0.697433144471584 (change=0.030167968988818218 %)
[2026-02-04 06:34:02] 2026-02-03 21:32:59,879 | INFO     | left removable region: 20
[2026-02-04 06:34:02] 2026-02-03 21:32:59,880 | INFO     | sum of square deviations: 549294020.0
[2026-02-04 06:34:02] 2026-02-03 21:32:59,880 | INFO     | sum of deviations: -2605506298.000001
[2026-02-04 06:34:02] 2026-02-03 21:32:59,880 | INFO     | mean x: 1770150025.0
[2026-02-04 06:34:02] 2026-02-03 21:32:59,880 | INFO     | mean y: 2521269.8016528925
[2026-02-04 06:34:02] 2026-02-03 21:32:59,880 | INFO     | intersect: 8399002699.80586
[2026-02-04 06:34:02] 2026-02-03 21:32:59,881 | INFO     | chi2: 0.00317658307227882
[2026-02-04 06:34:02] 2026-02-03 21:32:59,881 | INFO     | current memory leak: -4.74 B/s (using 121 data points, chi2=0.00)
[2026-02-04 06:34:02] 2026-02-03 21:32:59,881 | INFO     | could have reported an average CPU frequency of 3309 MHz (9 samples)
[2026-02-04 06:34:02] 2026-02-03 21:32:59,881 | INFO     | ..............................
[2026-02-04 06:34:02] 2026-02-03 21:32:59,881 | INFO     | . Timing measurements:
[2026-02-04 06:34:02] 2026-02-03 21:32:59,881 | INFO     | . get job = 0 s
[2026-02-04 06:34:02] 2026-02-03 21:32:59,884 | INFO     | . initial setup = 11 s
[2026-02-04 06:34:02] 2026-02-03 21:32:59,884 | INFO     | . payload setup = 6 s
[2026-02-04 06:34:02] 2026-02-03 21:32:59,884 | INFO     | . stage-in = 0 s
[2026-02-04 06:34:02] 2026-02-03 21:32:59,884 | INFO     | . payload execution = 9231 s
[2026-02-04 06:34:02] 2026-02-03 21:32:59,884 | INFO     | . stage-out = 0 s
[2026-02-04 06:34:02] 2026-02-03 21:32:59,884 | INFO     | . log creation = 0 s
[2026-02-04 06:34:02] 2026-02-03 21:32:59,884 | INFO     | ..............................
[2026-02-04 06:34:02] 2026-02-03 21:32:59,964 | INFO     | 
[2026-02-04 06:34:02] 2026-02-03 21:32:59,965 | INFO     | job summary report
[2026-02-04 06:34:02] 2026-02-03 21:32:59,965 | INFO     | --------------------------------------------------
[2026-02-04 06:34:02] 2026-02-03 21:32:59,965 | INFO     | PanDA job id: 6998622863
[2026-02-04 06:34:02] 2026-02-03 21:32:59,965 | INFO     | task id: 48431096
[2026-02-04 06:34:02] 2026-02-03 21:32:59,965 | INFO     | errors: (none)
[2026-02-04 06:34:02] 2026-02-03 21:32:59,965 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 06:34:02] 2026-02-03 21:32:59,965 | INFO     | pilot state: finished 
[2026-02-04 06:34:02] 2026-02-03 21:32:59,965 | INFO     | transexitcode: 0
[2026-02-04 06:34:02] 2026-02-03 21:32:59,965 | INFO     | exeerrorcode: 0
[2026-02-04 06:34:02] 2026-02-03 21:32:59,966 | INFO     | exeerrordiag: 
[2026-02-04 06:34:02] 2026-02-03 21:32:59,966 | INFO     | exitcode: 0
[2026-02-04 06:34:02] 2026-02-03 21:32:59,966 | INFO     | exitmsg: OK
[2026-02-04 06:34:02] 2026-02-03 21:32:59,966 | INFO     | cpuconsumptiontime: 52547 s
[2026-02-04 06:34:02] 2026-02-03 21:32:59,966 | INFO     | nevents: 400
[2026-02-04 06:34:02] 2026-02-03 21:32:59,966 | INFO     | neventsw: 0
[2026-02-04 06:34:02] 2026-02-03 21:32:59,966 | INFO     | pid: 3886381
[2026-02-04 06:34:02] 2026-02-03 21:32:59,966 | INFO     | pgrp: 3886381
[2026-02-04 06:34:02] 2026-02-03 21:32:59,966 | INFO     | corecount: 6
[2026-02-04 06:34:02] 2026-02-03 21:32:59,966 | INFO     | event service: False
[2026-02-04 06:34:02] 2026-02-03 21:32:59,966 | INFO     | sizes: {0: 2278266, 11: 2278266, 9242: 2306724, 9244: 2315722, 9246: 2315778, 9247: 2316036}
[2026-02-04 06:34:02] 2026-02-03 21:32:59,966 | INFO     | --------------------------------------------------
[2026-02-04 06:34:02] 2026-02-03 21:32:59,967 | INFO     | 
[2026-02-04 06:34:02] 2026-02-03 21:32:59,967 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-02-04 06:34:02] 2026-02-03 21:32:59,989 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 06:34:02] 2026-02-03 21:32:59,989 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 06:34:02] 2026-02-03 21:32:59,989 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 06:34:02] 2026-02-03 21:32:59,989 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 06:34:02] 2026-02-03 21:32:59,990 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 06:34:02] 2026-02-03 21:32:59,990 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 06:34:02] 2026-02-03 21:32:59,990 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 06:34:02] 2026-02-03 21:32:59,990 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 06:34:02] 2026-02-03 21:32:59,990 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 06:34:02] 2026-02-03 21:32:59,990 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 06:34:02] 2026-02-03 21:32:59,990 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 06:34:02] 2026-02-03 21:32:59,990 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 06:34:02] 2026-02-03 21:32:59,990 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 06:34:02] 2026-02-03 21:32:59,990 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 06:34:02] 2026-02-03 21:32:59,991 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 06:34:02] 2026-02-03 21:32:59,991 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 06:34:02] 2026-02-03 21:32:59,991 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 06:34:02] 2026-02-03 21:32:59,991 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 06:34:02] 2026-02-03 21:32:59,991 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 06:34:02] 2026-02-03 21:32:59,991 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 06:34:02] 2026-02-03 21:32:59,991 | INFO     | job 6998622863 has completed (purged errors)
[2026-02-04 06:34:02] 2026-02-03 21:32:59,991 | INFO     | overall cleanup function is called
[2026-02-04 06:34:02] 2026-02-03 21:33:00,999 | INFO     | --- collectZombieJob: --- 10, [3886381]
[2026-02-04 06:34:02] 2026-02-03 21:33:00,999 | INFO     | zombie collector waiting for pid 3886381
[2026-02-04 06:34:02] 2026-02-03 21:33:00,999 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 06:34:02] 2026-02-03 21:33:00,999 | INFO     | collected zombie processes
[2026-02-04 06:34:02] 2026-02-03 21:33:00,999 | INFO     | will attempt to kill all subprocesses of pid=3886381
[2026-02-04 06:34:02] 2026-02-03 21:33:01,102 | INFO     | process IDs to be killed: [3886381] (in reverse order)
[2026-02-04 06:34:02] 2026-02-03 21:33:01,145 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 06:34:02] 2026-02-03 21:33:01,145 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 06:34:02] 2026-02-03 21:33:01,149 | INFO     | did not find any defunct processes belonging to 3886381
[2026-02-04 06:34:02] 2026-02-03 21:33:01,152 | INFO     | did not find any defunct processes belonging to 3886381
[2026-02-04 06:34:02] 2026-02-03 21:33:01,152 | INFO     | ready for new job
[2026-02-04 06:34:02] 2026-02-03 21:33:01,152 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 06:34:02] 2026-02-03 21:33:01,154 | INFO     | **************************************
[2026-02-04 06:34:02] 2026-02-03 21:33:01,154 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 06:34:02] 2026-02-03 21:33:01,154 | INFO     | **************************************
[2026-02-04 06:34:02] 2026-02-03 21:33:01,154 | INFO     | 
[2026-02-04 06:34:02] 2026-02-03 21:33:01,155 | INFO     | architecture information:
[2026-02-04 06:34:02] 2026-02-03 21:33:01,156 | INFO     | executing command: cat /etc/os-release
[2026-02-04 06:34:02] 2026-02-03 21:33:01,172 | INFO     | cat /etc/os-release:
[2026-02-04 06:34:02] NAME="CentOS Linux"
[2026-02-04 06:34:02] VERSION="7 (Core)"
[2026-02-04 06:34:02] ID="centos"
[2026-02-04 06:34:02] ID_LIKE="rhel fedora"
[2026-02-04 06:34:02] VERSION_ID="7"
[2026-02-04 06:34:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 06:34:02] ANSI_COLOR="0;31"
[2026-02-04 06:34:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 06:34:02] HOME_URL="https://www.centos.org/"
[2026-02-04 06:34:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 06:34:02] 
[2026-02-04 06:34:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 06:34:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 06:34:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 06:34:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 06:34:02] 
[2026-02-04 06:34:02] 2026-02-03 21:33:01,172 | INFO     | **************************************
[2026-02-04 06:34:02] 2026-02-03 21:33:01,675 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-02-04 06:34:02] 2026-02-03 21:33:01,688 | INFO     | sufficient remaining disk space (92091187200 B)
[2026-02-04 06:34:02] 2026-02-03 21:33:01,689 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 06:34:02] 2026-02-03 21:33:01,689 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 06:34:02] 2026-02-03 21:33:01,689 | INFO     | update_server=False
[2026-02-04 06:34:02] 2026-02-03 21:33:01,689 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 06:34:02] 2026-02-03 21:33:01,689 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 06:34:02] 2026-02-03 21:33:01,689 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 06:34:02] 2026-02-03 21:33:01,690 | INFO     | aborting loop
[2026-02-04 06:34:02] 2026-02-03 21:33:01,689 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 06:34:02] 2026-02-03 21:33:02,413 | INFO     | all data control threads have been joined
[2026-02-04 06:34:02] 2026-02-03 21:33:02,502 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 06:34:02] 2026-02-03 21:33:02,694 | INFO     | [job] retrieve thread has finished
[2026-02-04 06:34:02] 2026-02-03 21:33:02,695 | INFO     | [job] job monitor thread has finished
[2026-02-04 06:34:02] 2026-02-03 21:33:02,695 | INFO     | [job] queue monitor thread has finished
[2026-02-04 06:34:02] 2026-02-03 21:33:02,714 | INFO     | [payload] validate_post thread has finished
[2026-02-04 06:34:02] 2026-02-03 21:33:02,735 | INFO     | all job control threads have been joined
[2026-02-04 06:34:02] 2026-02-03 21:33:02,895 | INFO     | [payload] failed_post thread has finished
[2026-02-04 06:34:02] 2026-02-03 21:33:02,922 | INFO     | [data] copytool_in thread has finished
[2026-02-04 06:34:02] 2026-02-03 21:33:02,972 | INFO     | all payload control threads have been joined
[2026-02-04 06:34:02] 2026-02-03 21:33:03,418 | INFO     | [data] control thread has finished
[2026-02-04 06:34:02] 2026-02-03 21:33:03,590 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 06:34:02] 2026-02-03 21:33:03,704 | INFO     | [job] validate thread has finished
[2026-02-04 06:34:02] 2026-02-03 21:33:03,726 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 06:34:02] 2026-02-03 21:33:03,740 | INFO     | [job] control thread has finished
[2026-02-04 06:34:02] 2026-02-03 21:33:03,929 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 06:34:02] 2026-02-03 21:33:03,977 | INFO     | [payload] control thread has finished
[2026-02-04 06:34:02] 2026-02-03 21:33:04,086 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 06:34:02] 2026-02-03 21:33:04,507 | INFO     | [data] copytool_out thread has finished
[2026-02-04 06:34:02] 2026-02-03 21:33:05,695 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 06:34:02] 2026-02-03 21:33:32,082 | INFO     | PID=3881778 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-04 06:34:02] 2026-02-03 21:33:32,082 | INFO     | .. there are 2 such processes running
[2026-02-04 06:34:02] 2026-02-03 21:33:32,082 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 06:34:02] 2026-02-03 21:33:32,082 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 06:34:02] 2026-02-03 21:33:32,082 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 06:34:02] 2026-02-03 21:33:56,911 | INFO     | [monitor] cgroup control has ended
[2026-02-04 06:34:02] 2026-02-03 21:33:57,219 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140020204140352)>', '<ExcThread(monitor, started 140019842914048)>']
[2026-02-04 06:34:02] 2026-02-03 21:33:58,186 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 06:34:02] 2026-02-03 21:33:58,186 | INFO     | [monitor] control thread has ended
[2026-02-04 06:34:02] 2026-02-03 21:34:02,244 | INFO     | all workflow threads have been joined
[2026-02-04 06:34:02] 2026-02-03 21:34:02,244 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 06:34:02] 2026-02-03 21:34:02,244 | INFO     | traces error code: 0
[2026-02-04 06:34:02] 2026-02-03 21:34:02,245 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 06:34:02] 2026-02-03 21:34:02,344 [wrapper] ==== pilot stdout END ====
[2026-02-04 06:34:02] 2026-02-03 21:34:02,347 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 06:34:02] 2026-02-03 21:34:02,349 [wrapper] pilotpid: 3881778
[2026-02-04 06:34:02] 2026-02-03 21:34:02,351 [wrapper] Pilot exit status: 0
[2026-02-04 06:34:02] 2026-02-03 21:34:02,361 [wrapper] pandaids: 6998622863
[2026-02-04 06:34:02] 2026-02-03 21:34:02,387 [wrapper] cleanup supervisor_pilot 3905037 3881779
[2026-02-04 06:34:02] 2026-02-03 21:34:02,390 [wrapper] Test setup, not cleaning
[2026-02-04 06:34:02] 2026-02-03 21:34:02,392 [wrapper] apfmon messages muted
[2026-02-04 06:34:02] 2026-02-03 21:34:02,395 [wrapper] ==== wrapper stdout END ====
[2026-02-04 06:34:02] 2026-02-03 21:34:02,397 [wrapper] ==== wrapper stderr END ====
[2026-02-04 06:34:02]  *** Error codes and diagnostics ***
[2026-02-04 06:34:02]     "exeErrorCode": 0,
[2026-02-04 06:34:02]     "exeErrorDiag": "",
[2026-02-04 06:34:02]     "pilotErrorCode": 0,
[2026-02-04 06:34:02]     "pilotErrorDiag": "",
[2026-02-04 06:34:02]  *** Listing of results directory ***
[2026-02-04 06:34:02] total 942248
[2026-02-04 06:34:02] -rw-r--r--. 1 boinc boinc    584422 Feb  3 16:50 pilot3.tar.gz
[2026-02-04 06:34:02] -rw-r--r--. 1 boinc boinc      5111 Feb  3 16:51 queuedata.json
[2026-02-04 06:34:02] -rwx------. 1 boinc boinc     36322 Feb  3 16:51 runpilot2-wrapper.sh
[2026-02-04 06:34:02] -rw-r--r--. 1 boinc boinc       100 Feb  4 03:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 06:34:02] -rwxr-xr-x. 1 boinc boinc      7986 Feb  4 03:56 run_atlas
[2026-02-04 06:34:02] -rw-r--r--. 1 boinc boinc       105 Feb  4 03:56 job.xml
[2026-02-04 06:34:02] -rw-r--r--. 1 boinc boinc      9356 Feb  4 03:56 init_data.xml
[2026-02-04 06:34:02] -rw-r--r--. 2 boinc boinc 673396106 Feb  4 03:56 EVNT.48431094._000111.pool.root.1
[2026-02-04 06:34:02] -rw-r--r--. 2 boinc boinc     15845 Feb  4 03:56 start_atlas.sh
[2026-02-04 06:34:02] drwxrwx--x. 2 boinc boinc        68 Feb  4 03:56 shared
[2026-02-04 06:34:02] -rw-r--r--. 2 boinc boinc    597771 Feb  4 03:56 input.tar.gz
[2026-02-04 06:34:02] -rw-r--r--. 1 boinc boinc         0 Feb  4 03:56 boinc_lockfile
[2026-02-04 06:34:02] -rw-r--r--. 1 boinc boinc      2554 Feb  4 03:57 pandaJob.out
[2026-02-04 06:34:02] -rw-------. 1 boinc boinc   1009252 Feb  4 03:58 agis_schedconf.cvmfs.json
[2026-02-04 06:34:02] -rw-------. 1 boinc boinc   1511668 Feb  4 03:58 agis_ddmendpoints.agis.ALL.json
[2026-02-04 06:34:02] -rw-------. 1 boinc boinc       418 Feb  4 03:58 workernode_map.json
[2026-02-04 06:34:02] drwx------. 5 boinc boinc      4096 Feb  4 03:58 pilot3
[2026-02-04 06:34:02] -rw-------. 1 boinc boinc 284084255 Feb  4 06:32 HITS.48431096._004169.pool.root.1
[2026-02-04 06:34:02] -rw-r--r--. 1 boinc boinc       530 Feb  4 06:32 boinc_task_state.xml
[2026-02-04 06:34:02] -rw-------. 1 boinc boinc      1031 Feb  4 06:32 memory_monitor_summary.json
[2026-02-04 06:34:02] -rw-------. 1 boinc boinc        95 Feb  4 06:32 pilot_heartbeat.json
[2026-02-04 06:34:02] -rw-------. 1 boinc boinc    395438 Feb  4 06:32 log.48431096._004169.job.log.tgz.1
[2026-02-04 06:34:02] -rw-------. 1 boinc boinc      6294 Feb  4 06:32 heartbeat.json
[2026-02-04 06:34:02] -rw-r--r--. 1 boinc boinc      8192 Feb  4 06:33 boinc_mmap_file
[2026-02-04 06:34:02] -rw-r--r--. 1 boinc boinc        27 Feb  4 06:34 wrapper_checkpoint.txt
[2026-02-04 06:34:02] -rw-------. 1 boinc boinc      4819 Feb  4 06:34 pilotlog.txt
[2026-02-04 06:34:02] -rw-------. 1 boinc boinc   1330205 Feb  4 06:34 log.48431096._004169.job.log.1
[2026-02-04 06:34:02] -rw-------. 1 boinc boinc       357 Feb  4 06:34 output.list
[2026-02-04 06:34:02] -rw-r--r--. 1 boinc boinc       620 Feb  4 06:34 runtime_log
[2026-02-04 06:34:02] -rw-------. 1 boinc boinc   1740800 Feb  4 06:34 result.tar.gz
[2026-02-04 06:34:02] -rw-r--r--. 1 boinc boinc      8774 Feb  4 06:34 runtime_log.err
[2026-02-04 06:34:02] -rw-------. 1 boinc boinc       643 Feb  4 06:34 rd3MDm8MQ78nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmsXUKDmMCVFYn.diag
[2026-02-04 06:34:02] -rw-r--r--. 1 boinc boinc     20721 Feb  4 06:34 stderr.txt
[2026-02-04 06:34:02] HITS file was successfully produced:
[2026-02-04 06:34:02] -rw-------. 1 boinc boinc 284084255 Feb  4 06:32 shared/HITS.pool.root.1
[2026-02-04 06:34:02]  *** Contents of shared directory: ***
[2026-02-04 06:34:02] total 937348
[2026-02-04 06:34:02] -rw-r--r--. 2 boinc boinc 673396106 Feb  4 03:56 ATLAS.root_0
[2026-02-04 06:34:02] -rw-r--r--. 2 boinc boinc     15845 Feb  4 03:56 start_atlas.sh
[2026-02-04 06:34:02] -rw-r--r--. 2 boinc boinc    597771 Feb  4 03:56 input.tar.gz
[2026-02-04 06:34:02] -rw-------. 1 boinc boinc 284084255 Feb  4 06:32 HITS.pool.root.1
[2026-02-04 06:34:02] -rw-------. 1 boinc boinc   1740800 Feb  4 06:34 result.tar.gz
06:34:04 (3877654): run_atlas exited; CPU time 52647.976927
06:34:04 (3877654): called boinc_finish(0)

</stderr_txt>
]]>

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