Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
16:03:35 (30820): wrapper (7.7.26015): starting
16:03:35 (30820): wrapper: running run_atlas (--nthreads 8)
[2026-02-03 16:03:35] Arguments: --nthreads 8
[2026-02-03 16:03:35] Threads: 8
[2026-02-03 16:03:35] Checking for CVMFS
[2026-02-03 16:03:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-03 16:03:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-03 16:03:35] Running cvmfs_config stat atlas.cern.ch
[2026-02-03 16:03:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-03 16:03:36] 2.11.0.0 5154 165018 83264 155832 2 1 3405640 4096001 0 130560 8 5777784 99.225 10127698 480 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-02-03 16:03:36] CVMFS is ok
[2026-02-03 16:03:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-03 16:03:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-03 16:03:36] Further information can be found at the LHC@home message board.
[2026-02-03 16:03:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 16:03:36] Checking for apptainer binary...
[2026-02-03 16:03:36] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-02-03 16:03:36] apptainer is not installed, using version from CVMFS
[2026-02-03 16:03:36] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 16:03:36] WARNING: Environment variable TMPDIR already has value [/tmp/job_11074729/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node269
[2026-02-03 16:03:36] apptainer works
[2026-02-03 16:03:36] Set ATHENA_PROC_NUMBER=8
[2026-02-03 16:03:36] Set ATHENA_CORE_NUMBER=8
[2026-02-03 16:03:36] Starting ATLAS job with PandaID=6983467782
[2026-02-03 16:03:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11074729/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-03 16:57:57]  *** The last 200 lines of the pilot log: ***
[2026-02-03 16:57:57]  direct_access_lan=False
[2026-02-03 16:57:57]  direct_access_wan=False
[2026-02-03 16:57:57]  domain=
[2026-02-03 16:57:57]  filesize=312128
[2026-02-03 16:57:57]  filetype=log
[2026-02-03 16:57:57]  guid=3bd6ce74-3182-43b1-aa1a-c4a2ea5dab10
[2026-02-03 16:57:57]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-03 16:57:57]  is_altstaged=None
[2026-02-03 16:57:57]  is_tar=False
[2026-02-03 16:57:57]  lfn=log.48318034._001820.job.log.tgz.1
[2026-02-03 16:57:57]  mtime=0
[2026-02-03 16:57:57]  protocol_id=None
[2026-02-03 16:57:57]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-03 16:57:57]  replicas=None
[2026-02-03 16:57:57]  scope=mc23_13p6TeV
[2026-02-03 16:57:57]  status=None
[2026-02-03 16:57:57]  status_code=0
[2026-02-03 16:57:57]  storage_token=
[2026-02-03 16:57:57]  surl=/tmp/job_11074729/atlas/pilot/slots/0/PanDA_Pilot-6983467782/log.48318034._001820.job.log.tgz.1
[2026-02-03 16:57:57]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/46/ce/log.48318034._001820.job.log.tgz.1
[2026-02-03 16:57:57]  workdir=None
[2026-02-03 16:57:57] ]
[2026-02-03 16:57:57] 2026-02-03 15:56:54,716 | INFO     | transferring file log.48318034._001820.job.log.tgz.1 from /tmp/job_11074729/atlas/pilot/slots/0/PanDA_Pilot-6983467782/log.48318034._001820.job.log.tgz.1 to /tmp/j
[2026-02-03 16:57:57] 2026-02-03 15:56:54,716 | INFO     | executing command: /usr/bin/env mv /tmp/job_11074729/atlas/pilot/slots/0/PanDA_Pilot-6983467782/log.48318034._001820.job.log.tgz.1 /tmp/job_11074729/atlas/pilot/sl
[2026-02-03 16:57:57] 2026-02-03 15:56:54,724 | INFO     | adding to output.list: log.48318034._001820.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/46/ce/log.48318034._001820.job.log.tg
[2026-02-03 16:57:57] 2026-02-03 15:56:54,725 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-03 16:57:57] 2026-02-03 15:56:54,725 | INFO     | summary of transferred files:
[2026-02-03 16:57:57] 2026-02-03 15:56:54,725 | INFO     |  -- lfn=log.48318034._001820.job.log.tgz.1, status_code=0, status=transferred
[2026-02-03 16:57:57] 2026-02-03 15:56:54,725 | INFO     | stage-out finished correctly
[2026-02-03 16:57:57] 2026-02-03 15:56:54,904 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-03 16:57:57] 2026-02-03 15:56:55,822 | INFO     | job 6983467782 has state=finished
[2026-02-03 16:57:57] 2026-02-03 15:56:55,822 | INFO     | preparing for final server update for job 6983467782 in state='finished'
[2026-02-03 16:57:57] 2026-02-03 15:56:55,822 | INFO     | reading metadata from: /tmp/job_11074729/atlas/pilot/slots/0/PanDA_Pilot-6983467782/jobReport.json
[2026-02-03 16:57:57] 2026-02-03 15:56:55,823 | INFO     | added worker_node to metadata from /tmp/job_11074729/atlas/pilot/slots/0/workernode_map.json
[2026-02-03 16:57:57] 2026-02-03 15:56:55,823 | INFO     | this job has now completed (state=finished)
[2026-02-03 16:57:57] 2026-02-03 15:56:55,823 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-03 16:57:57] 2026-02-03 15:56:55,823 | INFO     | log transfer has been attempted: DONE
[2026-02-03 16:57:57] 2026-02-03 15:56:55,824 | INFO     | job 6983467782 has finished - writing final server update
[2026-02-03 16:57:57] 2026-02-03 15:56:55,824 | INFO     | total number of processed events: 400 (read)
[2026-02-03 16:57:57] 2026-02-03 15:56:55,847 | INFO     | using path: /tmp/job_11074729/atlas/pilot/slots/0/PanDA_Pilot-6983467782/memory_monitor_summary.json (trf name=prmon)
[2026-02-03 16:57:57] 2026-02-03 15:56:55,848 | INFO     | extracted standard info from prmon json
[2026-02-03 16:57:57] 2026-02-03 15:56:55,848 | INFO     | extracted standard memory fields from prmon json
[2026-02-03 16:57:57] 2026-02-03 15:56:55,848 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-03 16:57:57] 2026-02-03 15:56:55,848 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-03 16:57:57] 2026-02-03 15:56:55,848 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-03 16:57:57] 2026-02-03 15:56:55,848 | INFO     | fitting pss+swap vs Time
[2026-02-03 16:57:57] 2026-02-03 15:56:55,849 | INFO     | sum of square deviations: 28242390.0
[2026-02-03 16:57:57] 2026-02-03 15:56:55,849 | INFO     | sum of deviations: -2055918319.0
[2026-02-03 16:57:57] 2026-02-03 15:56:55,849 | INFO     | mean x: 1770132690.0
[2026-02-03 16:57:57] 2026-02-03 15:56:55,849 | INFO     | mean y: 2610098.511111111
[2026-02-03 16:57:57] 2026-02-03 15:56:55,849 | INFO     | intersect: 128860267840.35759
[2026-02-03 16:57:57] 2026-02-03 15:56:55,849 | INFO     | chi2: 0.07883557951036638
[2026-02-03 16:57:57] 2026-02-03 15:56:55,849 | INFO     | current memory leak: -72.80 B/s (using 45 data points, chi2=0.08)
[2026-02-03 16:57:57] 2026-02-03 15:56:55,849 | INFO     | could have reported an average CPU frequency of 2420 MHz (5 samples)
[2026-02-03 16:57:57] 2026-02-03 15:56:55,849 | INFO     | ..............................
[2026-02-03 16:57:57] 2026-02-03 15:56:55,849 | INFO     | . Timing measurements:
[2026-02-03 16:57:57] 2026-02-03 15:56:55,849 | INFO     | . get job = 0 s
[2026-02-03 16:57:57] 2026-02-03 15:56:55,849 | INFO     | . initial setup = 2 s
[2026-02-03 16:57:57] 2026-02-03 15:56:55,849 | INFO     | . payload setup = 2 s
[2026-02-03 16:57:57] 2026-02-03 15:56:55,849 | INFO     | . stage-in = 0 s
[2026-02-03 16:57:57] 2026-02-03 15:56:55,849 | INFO     | . payload execution = 3170 s
[2026-02-03 16:57:57] 2026-02-03 15:56:55,849 | INFO     | . stage-out = 0 s
[2026-02-03 16:57:57] 2026-02-03 15:56:55,850 | INFO     | . log creation = 0 s
[2026-02-03 16:57:57] 2026-02-03 15:56:55,850 | INFO     | ..............................
[2026-02-03 16:57:57] 2026-02-03 15:56:56,068 | INFO     | time since job start (3190s) is within the limit (349056.0s)
[2026-02-03 16:57:57] 2026-02-03 15:56:56,167 | INFO     | 
[2026-02-03 16:57:57] 2026-02-03 15:56:56,168 | INFO     | job summary report
[2026-02-03 16:57:57] 2026-02-03 15:56:56,168 | INFO     | --------------------------------------------------
[2026-02-03 16:57:57] 2026-02-03 15:56:56,168 | INFO     | PanDA job id: 6983467782
[2026-02-03 16:57:57] 2026-02-03 15:56:56,168 | INFO     | task id: 48318034
[2026-02-03 16:57:57] 2026-02-03 15:56:56,168 | INFO     | errors: (none)
[2026-02-03 16:57:57] 2026-02-03 15:56:56,168 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-03 16:57:57] 2026-02-03 15:56:56,168 | INFO     | pilot state: finished 
[2026-02-03 16:57:57] 2026-02-03 15:56:56,168 | INFO     | transexitcode: 0
[2026-02-03 16:57:57] 2026-02-03 15:56:56,168 | INFO     | exeerrorcode: 0
[2026-02-03 16:57:57] 2026-02-03 15:56:56,168 | INFO     | exeerrordiag: 
[2026-02-03 16:57:57] 2026-02-03 15:56:56,168 | INFO     | exitcode: 0
[2026-02-03 16:57:57] 2026-02-03 15:56:56,168 | INFO     | exitmsg: OK
[2026-02-03 16:57:57] 2026-02-03 15:56:56,168 | INFO     | cpuconsumptiontime: 21242 s
[2026-02-03 16:57:57] 2026-02-03 15:56:56,168 | INFO     | nevents: 400
[2026-02-03 16:57:57] 2026-02-03 15:56:56,168 | INFO     | neventsw: 0
[2026-02-03 16:57:57] 2026-02-03 15:56:56,168 | INFO     | pid: 7755
[2026-02-03 16:57:57] 2026-02-03 15:56:56,168 | INFO     | pgrp: 7755
[2026-02-03 16:57:57] 2026-02-03 15:56:56,168 | INFO     | corecount: 8
[2026-02-03 16:57:57] 2026-02-03 15:56:56,168 | INFO     | event service: False
[2026-02-03 16:57:57] 2026-02-03 15:56:56,168 | INFO     | sizes: {0: 2248313, 1: 2278356, 11: 2278384, 3176: 2303963, 3177: 2313047, 3178: 2313217}
[2026-02-03 16:57:57] 2026-02-03 15:56:56,168 | INFO     | --------------------------------------------------
[2026-02-03 16:57:57] 2026-02-03 15:56:56,169 | INFO     | 
[2026-02-03 16:57:57] 2026-02-03 15:56:56,169 | INFO     | executing command: ls -lF /tmp/job_11074729/atlas/pilot/slots/0
[2026-02-03 16:57:57] 2026-02-03 15:56:56,178 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-03 16:57:57] 2026-02-03 15:56:56,178 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-03 16:57:57] 2026-02-03 15:56:56,178 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-03 16:57:57] 2026-02-03 15:56:56,178 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-03 16:57:57] 2026-02-03 15:56:56,178 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-03 16:57:57] 2026-02-03 15:56:56,178 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-03 16:57:57] 2026-02-03 15:56:56,178 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-03 16:57:57] 2026-02-03 15:56:56,178 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-03 16:57:57] 2026-02-03 15:56:56,178 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-03 16:57:57] 2026-02-03 15:56:56,178 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-03 16:57:57] 2026-02-03 15:56:56,178 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-03 16:57:57] 2026-02-03 15:56:56,178 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-03 16:57:57] 2026-02-03 15:56:56,178 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-03 16:57:57] 2026-02-03 15:56:56,178 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-03 16:57:57] 2026-02-03 15:56:56,178 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-03 16:57:57] 2026-02-03 15:56:56,178 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-03 16:57:57] 2026-02-03 15:56:56,178 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-03 16:57:57] 2026-02-03 15:56:56,179 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-03 16:57:57] 2026-02-03 15:56:56,179 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-03 16:57:57] 2026-02-03 15:56:56,179 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-03 16:57:57] 2026-02-03 15:56:56,179 | INFO     | job 6983467782 has completed (purged errors)
[2026-02-03 16:57:57] 2026-02-03 15:56:56,179 | INFO     | overall cleanup function is called
[2026-02-03 16:57:57] 2026-02-03 15:56:57,185 | INFO     | --- collectZombieJob: --- 10, [7755]
[2026-02-03 16:57:57] 2026-02-03 15:56:57,185 | INFO     | zombie collector waiting for pid 7755
[2026-02-03 16:57:57] 2026-02-03 15:56:57,185 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-03 16:57:57] 2026-02-03 15:56:57,185 | INFO     | collected zombie processes
[2026-02-03 16:57:57] 2026-02-03 15:56:57,185 | INFO     | will attempt to kill all subprocesses of pid=7755
[2026-02-03 16:57:57] 2026-02-03 15:56:57,343 | INFO     | process IDs to be killed: [7755] (in reverse order)
[2026-02-03 16:57:57] 2026-02-03 15:56:57,388 | WARNING  | found no corresponding commands to process id(s)
[2026-02-03 16:57:57] 2026-02-03 15:56:57,389 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-03 16:57:57] 2026-02-03 15:56:57,394 | INFO     | did not find any defunct processes belonging to 7755
[2026-02-03 16:57:57] 2026-02-03 15:56:57,399 | INFO     | did not find any defunct processes belonging to 7755
[2026-02-03 16:57:57] 2026-02-03 15:56:57,399 | INFO     | ready for new job
[2026-02-03 16:57:57] 2026-02-03 15:56:57,399 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-03 16:57:57] 2026-02-03 15:56:57,400 | INFO     | **************************************
[2026-02-03 16:57:57] 2026-02-03 15:56:57,400 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-03 16:57:57] 2026-02-03 15:56:57,400 | INFO     | **************************************
[2026-02-03 16:57:57] 2026-02-03 15:56:57,400 | INFO     | 
[2026-02-03 16:57:57] 2026-02-03 15:56:57,416 | INFO     | architecture information:
[2026-02-03 16:57:57] 2026-02-03 15:56:57,416 | INFO     | executing command: cat /etc/os-release
[2026-02-03 16:57:57] 2026-02-03 15:56:57,424 | INFO     | cat /etc/os-release:
[2026-02-03 16:57:57] NAME="CentOS Linux"
[2026-02-03 16:57:57] VERSION="7 (Core)"
[2026-02-03 16:57:57] ID="centos"
[2026-02-03 16:57:57] ID_LIKE="rhel fedora"
[2026-02-03 16:57:57] VERSION_ID="7"
[2026-02-03 16:57:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-03 16:57:57] ANSI_COLOR="0;31"
[2026-02-03 16:57:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-03 16:57:57] HOME_URL="https://www.centos.org/"
[2026-02-03 16:57:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-03 16:57:57] 
[2026-02-03 16:57:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-03 16:57:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-03 16:57:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-03 16:57:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-03 16:57:57] 
[2026-02-03 16:57:57] 2026-02-03 15:56:57,424 | INFO     | **************************************
[2026-02-03 16:57:57] 2026-02-03 15:56:57,927 | INFO     | executing command: df -mP /tmp/job_11074729/atlas/pilot/slots/0
[2026-02-03 16:57:57] 2026-02-03 15:56:57,933 | INFO     | sufficient remaining disk space (226886680576 B)
[2026-02-03 16:57:57] 2026-02-03 15:56:57,934 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-03 16:57:57] 2026-02-03 15:56:57,934 | INFO     | current server update state: UPDATING_FINAL
[2026-02-03 16:57:57] 2026-02-03 15:56:57,934 | INFO     | update_server=False
[2026-02-03 16:57:57] 2026-02-03 15:56:57,934 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-03 16:57:57] 2026-02-03 15:56:57,934 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-03 16:57:57] 2026-02-03 15:56:57,934 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-02-03 16:57:57] 2026-02-03 15:56:57,934 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-03 16:57:57] 2026-02-03 15:56:57,934 | INFO     | aborting loop
[2026-02-03 16:57:57] 2026-02-03 15:56:57,934 | INFO     | found 0 job(s) in 20 queues
[2026-02-03 16:57:57] 2026-02-03 15:56:57,935 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-03 16:57:57] 2026-02-03 15:56:57,935 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-03 16:57:57] 2026-02-03 15:56:58,300 | INFO     | all payload control threads have been joined
[2026-02-03 16:57:57] 2026-02-03 15:56:58,845 | INFO     | all data control threads have been joined
[2026-02-03 16:57:57] 2026-02-03 15:56:58,935 | INFO     | [job] retrieve thread has finished
[2026-02-03 16:57:57] 2026-02-03 15:56:58,940 | INFO     | [job] job monitor thread has finished
[2026-02-03 16:57:57] 2026-02-03 15:56:59,242 | INFO     | all job control threads have been joined
[2026-02-03 16:57:57] 2026-02-03 15:56:59,250 | INFO     | [data] copytool_in thread has finished
[2026-02-03 16:57:57] 2026-02-03 15:56:59,305 | INFO     | [payload] control thread has finished
[2026-02-03 16:57:57] 2026-02-03 15:56:59,364 | INFO     | [payload] validate_pre thread has finished
[2026-02-03 16:57:57] 2026-02-03 15:56:59,380 | INFO     | [job] create_data_payload thread has finished
[2026-02-03 16:57:57] 2026-02-03 15:56:59,803 | INFO     | [payload] execute_payloads thread has finished
[2026-02-03 16:57:57] 2026-02-03 15:56:59,850 | INFO     | [data] control thread has finished
[2026-02-03 16:57:57] 2026-02-03 15:56:59,882 | INFO     | [payload] failed_post thread has finished
[2026-02-03 16:57:57] 2026-02-03 15:56:59,940 | INFO     | [data] copytool_out thread has finished
[2026-02-03 16:57:57] 2026-02-03 15:57:00,152 | INFO     | [payload] validate_post thread has finished
[2026-02-03 16:57:57] 2026-02-03 15:57:00,247 | INFO     | [job] control thread has finished
[2026-02-03 16:57:57] 2026-02-03 15:57:00,258 | INFO     | [job] validate thread has finished
[2026-02-03 16:57:57] 2026-02-03 15:57:00,908 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-03 16:57:57] 2026-02-03 15:57:00,963 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-03 16:57:57] 2026-02-03 15:57:01,913 | INFO     | [job] queue monitor thread has finished
[2026-02-03 16:57:57] 2026-02-03 15:57:04,968 | INFO     | [data] queue_monitor thread has finished
[2026-02-03 16:57:57] 2026-02-03 15:57:08,144 | INFO     | job.realtimelogging is not enabled
[2026-02-03 16:57:57] 2026-02-03 15:57:09,145 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-03 16:57:57] 2026-02-03 15:57:51,753 | INFO     | [monitor] cgroup control has ended
[2026-02-03 16:57:57] 2026-02-03 15:57:52,491 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456063190784)>']
[2026-02-03 16:57:57] 2026-02-03 15:57:53,211 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-03 16:57:57] 2026-02-03 15:57:53,211 | INFO     | [monitor] control thread has ended
[2026-02-03 16:57:57] 2026-02-03 15:57:57,516 | INFO     | all workflow threads have been joined
[2026-02-03 16:57:57] 2026-02-03 15:57:57,516 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-03 16:57:57] 2026-02-03 15:57:57,517 | INFO     | traces error code: 0
[2026-02-03 16:57:57] 2026-02-03 15:57:57,517 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-03 16:57:57] 2026-02-03 15:57:57,578 [wrapper] ==== pilot stdout END ====
[2026-02-03 16:57:57] 2026-02-03 15:57:57,579 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-03 16:57:57] 2026-02-03 15:57:57,580 [wrapper] pilotpid: 2765
[2026-02-03 16:57:57] 2026-02-03 15:57:57,582 [wrapper] Pilot exit status: 0
[2026-02-03 16:57:57] 2026-02-03 15:57:57,587 [wrapper] pandaids: 6983467782
[2026-02-03 16:57:57] 2026-02-03 15:57:57,620 [wrapper] cleanup supervisor_pilot 20666 2766
[2026-02-03 16:57:57] 2026-02-03 15:57:57,621 [wrapper] Test setup, not cleaning
[2026-02-03 16:57:57] 2026-02-03 15:57:57,622 [wrapper] apfmon messages muted
[2026-02-03 16:57:57] 2026-02-03 15:57:57,623 [wrapper] ==== wrapper stdout END ====
[2026-02-03 16:57:57] 2026-02-03 15:57:57,625 [wrapper] ==== wrapper stderr END ====
[2026-02-03 16:57:57]  *** Error codes and diagnostics ***
[2026-02-03 16:57:57]     "exeErrorCode": 0,
[2026-02-03 16:57:57]     "exeErrorDiag": "",
[2026-02-03 16:57:57]     "pilotErrorCode": 0,
[2026-02-03 16:57:57]     "pilotErrorDiag": "",
[2026-02-03 16:57:57]  *** Listing of results directory ***
[2026-02-03 16:57:57] total 673344
[2026-02-03 16:57:57] -rwx------ 1 mf493845 unix-user     36322 Jan 25 23:57 runpilot2-wrapper.sh
[2026-02-03 16:57:57] -rw------- 1 mf493845 unix-user      5111 Jan 25 23:58 queuedata.json
[2026-02-03 16:57:57] -rw------- 1 mf493845 unix-user    584422 Jan 26 00:00 pilot3.tar.gz
[2026-02-03 16:57:57] -rw------- 1 mf493845 unix-user       100 Feb  3 13:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-03 16:57:57] -rwxr-xr-x 1 mf493845 unix-user      7986 Feb  3 13:54 run_atlas
[2026-02-03 16:57:57] -rw------- 1 mf493845 unix-user       105 Feb  3 13:54 job.xml
[2026-02-03 16:57:57] -rw-r--r-- 2 mf493845 unix-user 505677743 Feb  3 16:03 EVNT.48318032._000042.pool.root.1
[2026-02-03 16:57:57] -rw-r--r-- 2 mf493845 unix-user     15845 Feb  3 16:03 start_atlas.sh
[2026-02-03 16:57:57] drwxrwx--x 2 mf493845 unix-user       100 Feb  3 16:03 shared
[2026-02-03 16:57:57] -rw-r--r-- 2 mf493845 unix-user    597758 Feb  3 16:03 input.tar.gz
[2026-02-03 16:57:57] -rw------- 1 mf493845 unix-user      6389 Feb  3 16:03 init_data.xml
[2026-02-03 16:57:57] -rw------- 1 mf493845 unix-user         0 Feb  3 16:03 boinc_setup_complete
[2026-02-03 16:57:57] -rw------- 1 mf493845 unix-user      8192 Feb  3 16:03 boinc_mmap_file
[2026-02-03 16:57:57] -rw------- 1 mf493845 unix-user         0 Feb  3 16:03 boinc_lockfile
[2026-02-03 16:57:57] -rw------- 1 mf493845 unix-user      2532 Feb  3 16:03 pandaJob.out
[2026-02-03 16:57:57] -rw------- 1 mf493845 unix-user   1009258 Feb  3 16:03 agis_schedconf.cvmfs.json
[2026-02-03 16:57:57] -rw------- 1 mf493845 unix-user   1511668 Feb  3 16:03 agis_ddmendpoints.agis.ALL.json
[2026-02-03 16:57:57] -rw------- 1 mf493845 unix-user       421 Feb  3 16:03 workernode_map.json
[2026-02-03 16:57:57] drwx------ 5 mf493845 unix-user       440 Feb  3 16:03 pilot3
[2026-02-03 16:57:57] -rw------- 1 mf493845 unix-user        95 Feb  3 16:56 pilot_heartbeat.json
[2026-02-03 16:57:57] -rw------- 1 mf493845 unix-user 178307180 Feb  3 16:56 HITS.48318034._001820.pool.root.1
[2026-02-03 16:57:57] -rw------- 1 mf493845 unix-user      1048 Feb  3 16:56 memory_monitor_summary.json
[2026-02-03 16:57:57] -rw------- 1 mf493845 unix-user    312128 Feb  3 16:56 log.48318034._001820.job.log.tgz.1
[2026-02-03 16:57:57] -rw------- 1 mf493845 unix-user      6338 Feb  3 16:56 heartbeat.json
[2026-02-03 16:57:57] -rw------- 1 mf493845 unix-user      4634 Feb  3 16:57 pilotlog.txt
[2026-02-03 16:57:57] -rw------- 1 mf493845 unix-user    487745 Feb  3 16:57 log.48318034._001820.job.log.1
[2026-02-03 16:57:57] -rw------- 1 mf493845 unix-user       357 Feb  3 16:57 output.list
[2026-02-03 16:57:57] -rw------- 1 mf493845 unix-user       620 Feb  3 16:57 runtime_log
[2026-02-03 16:57:57] -rw------- 1 mf493845 unix-user    819200 Feb  3 16:57 result.tar.gz
[2026-02-03 16:57:57] -rw------- 1 mf493845 unix-user      9219 Feb  3 16:57 runtime_log.err
[2026-02-03 16:57:57] -rw------- 1 mf493845 unix-user       644 Feb  3 16:57 7ZELDmVEO48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmS31KDmrccbbm.diag
[2026-02-03 16:57:57] -rw------- 1 mf493845 unix-user     21365 Feb  3 16:57 stderr.txt
[2026-02-03 16:57:57] HITS file was successfully produced:
[2026-02-03 16:57:57] -rw------- 1 mf493845 unix-user 178307180 Feb  3 16:56 shared/HITS.pool.root.1
[2026-02-03 16:57:57]  *** Contents of shared directory: ***
[2026-02-03 16:57:57] total 669360
[2026-02-03 16:57:57] -rw-r--r-- 2 mf493845 unix-user 505677743 Feb  3 16:03 ATLAS.root_0
[2026-02-03 16:57:57] -rw-r--r-- 2 mf493845 unix-user     15845 Feb  3 16:03 start_atlas.sh
[2026-02-03 16:57:57] -rw-r--r-- 2 mf493845 unix-user    597758 Feb  3 16:03 input.tar.gz
[2026-02-03 16:57:57] -rw------- 1 mf493845 unix-user 178307180 Feb  3 16:56 HITS.pool.root.1
[2026-02-03 16:57:57] -rw------- 1 mf493845 unix-user    819200 Feb  3 16:57 result.tar.gz
16:57:58 (30820): run_atlas exited; CPU time 21307.269625
16:57:58 (30820): called boinc_finish(0)

</stderr_txt>
]]>

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