Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-03 12:24:16 (2883): vboxwrapper version 26210
2026-02-03 12:24:16 (2883): BOINC client version: 8.2.8
2026-02-03 12:24:16 (2883): Detected: VirtualBox VboxManage Interface (Version: 7.1.10)
2026-02-03 12:24:16 (2883): Detected: Sandbox Configuration Enabled
2026-02-03 12:24:16 (2883): Successfully copied 'init_data.xml' to the shared directory.
2026-02-03 12:24:16 (2883): Create VM. (boinc_bbb29b32805ab953, slot#7)
2026-02-03 12:24:16 (2883): Setting Memory Size for VM. (4800MB)
2026-02-03 12:24:16 (2883): Setting CPU Count for VM. (8)
2026-02-03 12:24:16 (2883): Setting Chipset Options for VM.
2026-02-03 12:24:16 (2883): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-03 12:24:16 (2883): Setting Boot Options for VM.
2026-02-03 12:24:16 (2883): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-03 12:24:16 (2883): Enabling VM Network Access.
2026-02-03 12:24:17 (2883): Disabling USB Support for VM.
2026-02-03 12:24:17 (2883): Disabling COM Port Support for VM.
2026-02-03 12:24:17 (2883): Disabling Audio Support for VM.
2026-02-03 12:24:17 (2883): Disabling Clipboard Support for VM.
2026-02-03 12:24:17 (2883): Disabling Drag and Drop Support for VM.
2026-02-03 12:24:17 (2883): Adding storage controller(s) to VM.
2026-02-03 12:24:17 (2883): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-03 12:24:17 (2883): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-03 12:24:17 (2883): forwarding host port 51436 to guest port 80
2026-02-03 12:24:17 (2883): Enabling remote desktop for VM.
2026-02-03 12:24:18 (2883): Required extension pack not installed, remote desktop not enabled.
2026-02-03 12:24:18 (2883): Enabling shared directory for VM.
2026-02-03 12:24:18 (2883): Starting VM using VBoxManage interface. (boinc_bbb29b32805ab953, slot#7)
2026-02-03 12:24:23 (2883): Successfully started VM. (PID = '3009')
2026-02-03 12:24:23 (2883): Reporting VM Process ID to BOINC.
2026-02-03 12:24:23 (2883): Guest Log: BIOS: VirtualBox 7.1.10
2026-02-03 12:24:23 (2883): Guest Log: CPUID EDX: 0x178bfbff
2026-02-03 12:24:23 (2883): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-03 12:24:23 (2883): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-03 12:24:23 (2883): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-03 12:24:23 (2883): Detected: Web Application Enabled (http://localhost:51436)
2026-02-03 12:24:23 (2883): Preference change detected
2026-02-03 12:24:23 (2883): Setting CPU throttle for VM. (10%)
2026-02-03 12:24:23 (2883): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-03 12:24:25 (2883): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-03 12:24:25 (2883): Guest Log: BIOS: Booting from Hard Disk...
2026-02-03 12:24:30 (2883): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-03 12:24:30 (2883): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-03 12:24:30 (2883): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-03 12:24:30 (2883): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-03 12:24:30 (2883): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-03 12:24:30 (2883): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-03 12:24:30 (2883): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-03 12:24:30 (2883): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-03 12:24:30 (2883): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-03 12:24:30 (2883): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-03 12:24:30 (2883): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-03 12:24:30 (2883): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-03 12:24:30 (2883): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-03 12:24:30 (2883): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-03 12:24:30 (2883): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-03 12:24:30 (2883): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-03 12:24:30 (2883): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-03 12:24:30 (2883): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-03 12:24:30 (2883): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-03 12:24:30 (2883): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-03 12:24:30 (2883): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-03 12:24:30 (2883): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-03 12:24:30 (2883): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-03 12:24:30 (2883): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-03 12:24:30 (2883): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-03 12:24:30 (2883): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-03 12:24:30 (2883): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-03 12:24:30 (2883): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-03 12:24:30 (2883): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-03 12:24:30 (2883): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-03 12:24:30 (2883): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-03 12:24:30 (2883): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-03 12:25:18 (2883): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-03 12:25:18 (2883): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-02-03 12:26:46 (2883): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-03 12:26:46 (2883): Guest Log: 00:00:00.000262 main     Log opened 2026-02-03T11:26:43.604661000Z
2026-02-03 12:26:46 (2883): Guest Log: 00:00:00.000485 main     OS Product: Linux
2026-02-03 12:26:46 (2883): Guest Log: 00:00:00.000600 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-03 12:26:46 (2883): Guest Log: 00:00:00.000708 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-03 12:26:46 (2883): Guest Log: 00:00:00.000819 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-03 12:26:46 (2883): Guest Log: 00:00:00.000821 main     Process ID: 1399
2026-02-03 12:26:46 (2883): Guest Log: 00:00:00.000822 main     Package type: LINUX_64BITS_GENERIC
2026-02-03 12:26:46 (2883): Guest Log: 00:00:00.004250 main     5.2.32 r132073 started. Verbose level = 0
2026-02-03 12:26:47 (2883): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-03 12:26:47 (2883): Guest Log: [INFO] Mounting shared directory
2026-02-03 12:26:48 (2883): Guest Log: [INFO] Checking for init_data.xml
2026-02-03 12:27:02 (2883): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-03 12:27:02 (2883): Guest Log: [INFO] Detected branch: prod
2026-02-03 12:27:04 (2883): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-03 12:27:04 (2883): Guest Log: Copying input files
2026-02-03 12:28:20 (2883): Guest Log: Copied input files into RunAtlas.
2026-02-03 12:28:21 (2883): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-03 12:28:21 (2883): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-03 12:28:21 (2883): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-03 12:28:21 (2883): Guest Log: Further information can be found at the LHC@home message board.
2026-02-03 12:29:37 (2883): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-03 12:29:40 (2883): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-03 12:29:40 (2883): Guest Log: 2.6.3.0 1677 2 32184 155828 3 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-02-03 12:29:50 (2883): Guest Log: copied the webapp to /var/www
2026-02-03 12:29:51 (2883): Guest Log: ATHENA_PROC_NUMBER=8
2026-02-03 12:29:51 (2883): Guest Log: ATHENA_CORE_NUMBER=8
2026-02-03 12:29:52 (2883): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-03 12:29:53 (2883): Guest Log:  *** Starting ATLAS job. (PandaID=6998612811 taskID=48431096) ***
2026-02-03 14:04:03 (2883): Status Report: Elapsed Time: '6000.000000'
2026-02-03 14:04:03 (2883): Status Report: CPU Time: '12402.190000'
2026-02-03 15:43:41 (2883): Status Report: Elapsed Time: '12000.113330'
2026-02-03 15:43:41 (2883): Status Report: CPU Time: '34931.910000'
2026-02-03 17:23:16 (2883): Status Report: Elapsed Time: '18000.113330'
2026-02-03 17:23:16 (2883): Status Report: CPU Time: '55377.400000'
2026-02-03 17:56:38 (2883): Guest Log:  *** Job finished ***
2026-02-03 17:56:38 (2883): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-03 17:56:39 (2883): Guest Log: 2026-02-03 16:55:11,167 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-02-03 17:56:39 (2883): Guest Log: 2026-02-03 16:55:11,167 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-03 17:56:39 (2883): Guest Log: 2026-02-03 16:55:29,602 | INFO     | [monitor] cgroup control has ended
2026-02-03 17:56:39 (2883): Guest Log: 2026-02-03 16:55:31,324 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140655625848640)>', '<ExcThread(monitor, started 140655036704512)>']
2026-02-03 17:56:39 (2883): Guest Log: 2026-02-03 16:55:31,331 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-03 17:56:39 (2883): Guest Log: 2026-02-03 16:55:31,331 | INFO     | [monitor] control thread has ended
2026-02-03 17:56:39 (2883): Guest Log: 2026-02-03 16:55:36,329 | INFO     | all workflow threads have been joined
2026-02-03 17:56:39 (2883): Guest Log: 2026-02-03 16:55:36,329 | INFO     | end of generic workflow (traces error code: 0)
2026-02-03 17:56:39 (2883): Guest Log: 2026-02-03 16:55:36,332 | INFO     | traces error code: 0
2026-02-03 17:56:39 (2883): Guest Log: 2026-02-03 16:55:36,332 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-03 17:56:39 (2883): Guest Log: 2026-02-03 16:55:38,165 [wrapper] ==== pilot stdout END ====
2026-02-03 17:56:39 (2883): Guest Log: 2026-02-03 16:55:38,381 [wrapper] ==== wrapper stdout RESUME ====
2026-02-03 17:56:39 (2883): Guest Log: 2026-02-03 16:55:39,196 [wrapper] pilotpid: 6236
2026-02-03 17:56:39 (2883): Guest Log: 2026-02-03 16:55:39,411 [wrapper] Pilot exit status: 0
2026-02-03 17:56:39 (2883): Guest Log: 2026-02-03 16:55:40,648 [wrapper] pandaids: 6998612811
2026-02-03 17:56:39 (2883): Guest Log: 2026-02-03 16:55:41,384 [wrapper] cleanup supervisor_pilot 30303 6237
2026-02-03 17:56:39 (2883): Guest Log: 2026-02-03 16:55:41,587 [wrapper] Test setup, not cleaning
2026-02-03 17:56:39 (2883): Guest Log: 2026-02-03 16:55:41,786 [wrapper] apfmon messages muted
2026-02-03 17:56:39 (2883): Guest Log: 2026-02-03 16:55:41,887 [wrapper] ==== wrapper stdout END ====
2026-02-03 17:56:39 (2883): Guest Log: 2026-02-03 16:55:41,991 [wrapper] ==== wrapper stderr END ====
2026-02-03 17:56:39 (2883): Guest Log:  *** Error codes and diagnostics ***
2026-02-03 17:56:39 (2883): Guest Log:     "exeErrorCode": 0,
2026-02-03 17:56:39 (2883): Guest Log:     "exeErrorDiag": "",
2026-02-03 17:56:39 (2883): Guest Log:     "pilotErrorCode": 0,
2026-02-03 17:56:39 (2883): Guest Log:     "pilotErrorDiag": "",
2026-02-03 17:56:39 (2883): Guest Log:  *** Listing of results directory ***
2026-02-03 17:56:39 (2883): Guest Log: total 280396
2026-02-03 17:56:39 (2883): Guest Log: -rwx------. 1 atlas atlas     36322 Feb  3 05:37 runpilot2-wrapper.sh
2026-02-03 17:56:39 (2883): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Feb  3 05:37 queuedata.json
2026-02-03 17:56:39 (2883): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Feb  3 05:37 pilot3.tar.gz
2026-02-03 17:56:39 (2883): Guest Log: -rw-r-----. 1 atlas atlas     15845 Feb  3 11:27 start_atlas.sh
2026-02-03 17:56:39 (2883): Guest Log: -rw-r-----. 1 atlas atlas    597763 Feb  3 11:27 input.tar.gz
2026-02-03 17:56:39 (2883): Guest Log: -rw-r--r--. 1 atlas atlas     10075 Feb  3 11:27 init_data.xml
2026-02-03 17:56:39 (2883): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb  3 11:28 EVNT.48431094._000045.pool.root.1 -> /data/./ATLAS.root_0
2026-02-03 17:56:39 (2883): Guest Log: -rw-r--r--. 1 atlas atlas      2553 Feb  3 11:29 pandaJob.out
2026-02-03 17:56:39 (2883): Guest Log: -rw-------. 1 atlas atlas       411 Feb  3 11:38 workernode_map.json
2026-02-03 17:56:39 (2883): Guest Log: -rw-------. 1 atlas atlas   1009250 Feb  3 11:38 agis_schedconf.cvmfs.json
2026-02-03 17:56:39 (2883): Guest Log: drwx------. 5 atlas atlas      4096 Feb  3 11:39 pilot3
2026-02-03 17:56:39 (2883): Guest Log: -rw-------. 1 atlas atlas 277532088 Feb  3 16:50 HITS.48431096._002860.pool.root.1
2026-02-03 17:56:39 (2883): Guest Log: -rw-------. 1 atlas atlas      1048 Feb  3 16:53 memory_monitor_summary.json
2026-02-03 17:56:39 (2883): Guest Log: -rw-------. 1 atlas atlas        95 Feb  3 16:54 pilot_heartbeat.json
2026-02-03 17:56:39 (2883): Guest Log: -rw-------. 1 atlas atlas   1511668 Feb  3 16:54 agis_ddmendpoints.agis.ALL.json
2026-02-03 17:56:39 (2883): Guest Log: -rw-------. 1 atlas atlas    545120 Feb  3 16:54 log.48431096._002860.job.log.tgz.1
2026-02-03 17:56:39 (2883): Guest Log: -rw-------. 1 atlas atlas      6348 Feb  3 16:54 heartbeat.json
2026-02-03 17:56:39 (2883): Guest Log: -rw-------. 1 atlas atlas      4802 Feb  3 16:55 pilotlog.txt
2026-02-03 17:56:39 (2883): Guest Log: -rw-------. 1 atlas atlas   2315891 Feb  3 16:55 log.48431096._002860.job.log.1
2026-02-03 17:56:39 (2883): Guest Log: -rw-------. 1 atlas atlas       357 Feb  3 16:55 output.list
2026-02-03 17:56:39 (2883): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb  3 16:55 runtime_log
2026-02-03 17:56:39 (2883): Guest Log: -rw-------. 1 atlas atlas   2877440 Feb  3 16:55 result.tar.gz
2026-02-03 17:56:39 (2883): Guest Log: -rw-------. 1 atlas atlas       685 Feb  3 16:55 uG0KDm0HO78nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm3MUKDmeue5Lo.diag
2026-02-03 17:56:39 (2883): Guest Log: -rw-r--r--. 1 atlas atlas      8814 Feb  3 16:55 runtime_log.err
2026-02-03 17:56:40 (2883): Guest Log: Looking for outputfile HITS.48431096._002860.pool.root.1
2026-02-03 17:56:40 (2883): Guest Log: HITS file was successfully produced
2026-02-03 17:56:40 (2883): Guest Log: -rw-------. 1 atlas atlas 277532088 Feb  3 16:50 /home/atlas/RunAtlas/HITS.48431096._002860.pool.root.1
2026-02-03 17:56:42 (2883): Guest Log: Successfully finished the ATLAS job!
2026-02-03 17:56:42 (2883): Guest Log: Copying the results back to the shared directory!
2026-02-03 17:56:43 (2883): Guest Log:  *** Contents of shared directory: ***
2026-02-03 17:56:44 (2883): Guest Log: total 667748
2026-02-03 17:56:44 (2883): Guest Log: -rw-rw----. 1 root root 680264403 Feb  3 11:24 ATLAS.root_0
2026-02-03 17:56:44 (2883): Guest Log: -rw-rw-r--. 1 root root     10075 Feb  3 11:24 init_data.xml
2026-02-03 17:56:44 (2883): Guest Log: -rw-rw----. 1 root root    597763 Feb  3 11:24 input.tar.gz
2026-02-03 17:56:44 (2883): Guest Log: -rw-r--r--. 1 root root   2877440 Feb  3  2026 result.tar.gz
2026-02-03 17:56:44 (2883): Guest Log: -rw-rw----. 1 root root     15845 Feb  3 11:24 start_atlas.sh
2026-02-03 17:56:45 (2883): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-03 17:56:46 (2883): VM Completion File Detected.
2026-02-03 17:56:46 (2883): Powering off VM.
2026-02-03 17:56:47 (2883): Successfully stopped VM.
2026-02-03 17:56:47 (2883): Deregistering VM. (boinc_bbb29b32805ab953, slot#7)
2026-02-03 17:56:47 (2883): Removing network bandwidth throttle group from VM.
2026-02-03 17:56:47 (2883): Removing VM from VirtualBox.
2026-02-03 17:56:52 (2883): called boinc_finish(0)

</stderr_txt>
]]>

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