Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:55:57 (3905238): wrapper (7.7.26015): starting
06:55:57 (3905238): wrapper: running run_atlas (--nthreads 6)
[2026-02-04 06:55:57] Arguments: --nthreads 6
[2026-02-04 06:55:57] Threads: 6
[2026-02-04 06:55:57] Checking for CVMFS
[2026-02-04 06:55:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-04 06:56:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-04 06:56:16] Running cvmfs_config stat atlas.cern.ch
[2026-02-04 06:56:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-04 06:56:17] 2.13.3.0 3793838 880 63644 155844 2 50 15004757 20971521 929 130560 0 372371 99.981 31440 14 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-02-04 06:56:17] CVMFS is ok
[2026-02-04 06:56:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 06:56:17] Checking for apptainer binary...
[2026-02-04 06:56:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-04 06:56:17] Running /usr/bin/apptainer --version
[2026-02-04 06:56:17] apptainer version 1.4.5-2.el9
[2026-02-04 06:56:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 06:56:17] testio005
[2026-02-04 06:56:17] apptainer works
[2026-02-04 06:56:17] Set ATHENA_PROC_NUMBER=6
[2026-02-04 06:56:17] Set ATHENA_CORE_NUMBER=6
[2026-02-04 06:56:17] Starting ATLAS job with PandaID=6993749590
[2026-02-04 06:56:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 08:57:00]  *** The last 200 lines of the pilot log: ***
[2026-02-04 08:57:00] 2026-02-03 23:55:56,713 | INFO     | mean y: 2437741.828828829
[2026-02-04 08:57:00] 2026-02-03 23:55:56,713 | INFO     | intersect: -35628141521.36699
[2026-02-04 08:57:00] 2026-02-03 23:55:56,713 | INFO     | chi2: 1.7052725842149052
[2026-02-04 08:57:00] 2026-02-03 23:55:56,713 | INFO     | current chi2=1.7052725842149052 (change=-0.19864534166638748 %)
[2026-02-04 08:57:00] 2026-02-03 23:55:56,713 | INFO     | right removable region: 110
[2026-02-04 08:57:00] 2026-02-03 23:55:56,713 | INFO     | sum of square deviations: 424074693.693695
[2026-02-04 08:57:00] 2026-02-03 23:55:56,714 | INFO     | sum of deviations: -8449278982.927929
[2026-02-04 08:57:00] 2026-02-03 23:55:56,714 | INFO     | mean x: 1770159544.144144
[2026-02-04 08:57:00] 2026-02-03 23:55:56,714 | INFO     | mean y: 2482042.4954954954
[2026-02-04 08:57:00] 2026-02-03 23:55:56,714 | INFO     | intersect: 35271202518.349655
[2026-02-04 08:57:00] 2026-02-03 23:55:56,714 | INFO     | chi2: 0.13141977077166306
[2026-02-04 08:57:00] 2026-02-03 23:55:56,714 | INFO     | current chi2=0.13141977077166306 (change=92.27801870250822 %)
[2026-02-04 08:57:00] 2026-02-03 23:55:56,715 | INFO     | sum of square deviations: 369305996.0849058
[2026-02-04 08:57:00] 2026-02-03 23:55:56,715 | INFO     | sum of deviations: -3785461337.2075534
[2026-02-04 08:57:00] 2026-02-03 23:55:56,715 | INFO     | mean x: 1770159696.6509433
[2026-02-04 08:57:00] 2026-02-03 23:55:56,715 | INFO     | mean y: 2468958.0754716983
[2026-02-04 08:57:00] 2026-02-03 23:55:56,715 | INFO     | intersect: 18146964751.245922
[2026-02-04 08:57:00] 2026-02-03 23:55:56,715 | INFO     | chi2: 0.08457608654976324
[2026-02-04 08:57:00] 2026-02-03 23:55:56,716 | INFO     | current chi2=0.08457608654976324 (change=35.64432044497244 %)
[2026-02-04 08:57:00] 2026-02-03 23:55:56,716 | INFO     | sum of square deviations: 319467623.46534586
[2026-02-04 08:57:00] 2026-02-03 23:55:56,716 | INFO     | sum of deviations: 796436583.6930695
[2026-02-04 08:57:00] 2026-02-03 23:55:56,716 | INFO     | mean x: 1770159849.1584158
[2026-02-04 08:57:00] 2026-02-03 23:55:56,716 | INFO     | mean y: 2455081.831683168
[2026-02-04 08:57:00] 2026-02-03 23:55:56,716 | INFO     | intersect: -4410574468.899293
[2026-02-04 08:57:00] 2026-02-03 23:55:56,716 | INFO     | chi2: 0.0014666242138501417
[2026-02-04 08:57:00] 2026-02-03 23:55:56,717 | INFO     | current chi2=0.0014666242138501417 (change=98.26591147252101 %)
[2026-02-04 08:57:00] 2026-02-03 23:55:56,717 | INFO     | sum of square deviations: 274327013.3333326
[2026-02-04 08:57:00] 2026-02-03 23:55:56,717 | INFO     | sum of deviations: 371164092.66666645
[2026-02-04 08:57:00] 2026-02-03 23:55:56,717 | INFO     | mean x: 1770160001.6666667
[2026-02-04 08:57:00] 2026-02-03 23:55:56,717 | INFO     | mean y: 2456508.3958333335
[2026-02-04 08:57:00] 2026-02-03 23:55:56,717 | INFO     | intersect: -2392567674.275865
[2026-02-04 08:57:00] 2026-02-03 23:55:56,718 | INFO     | chi2: 0.0010007063218835876
[2026-02-04 08:57:00] 2026-02-03 23:55:56,718 | INFO     | current chi2=0.0010007063218835876 (change=31.768048527130155 %)
[2026-02-04 08:57:00] 2026-02-03 23:55:56,718 | INFO     | sum of square deviations: 233651603.1868133
[2026-02-04 08:57:00] 2026-02-03 23:55:56,718 | INFO     | sum of deviations: 171258094.85714287
[2026-02-04 08:57:00] 2026-02-03 23:55:56,718 | INFO     | mean x: 1770160154.1758242
[2026-02-04 08:57:00] 2026-02-03 23:55:56,718 | INFO     | mean y: 2457257.5714285714
[2026-02-04 08:57:00] 2026-02-03 23:55:56,718 | INFO     | intersect: -1295005509.4774868
[2026-02-04 08:57:00] 2026-02-03 23:55:56,719 | INFO     | chi2: 0.0008985858785290948
[2026-02-04 08:57:00] 2026-02-03 23:55:56,719 | INFO     | current chi2=0.0008985858785290948 (change=10.204836436155992 %)
[2026-02-04 08:57:00] 2026-02-03 23:55:56,719 | INFO     | left removable region: 50
[2026-02-04 08:57:00] 2026-02-03 23:55:56,719 | INFO     | sum of square deviations: 66950862.73333338
[2026-02-04 08:57:00] 2026-02-03 23:55:56,719 | INFO     | sum of deviations: 148864385.23333335
[2026-02-04 08:57:00] 2026-02-03 23:55:56,719 | INFO     | mean x: 1770160733.7666667
[2026-02-04 08:57:00] 2026-02-03 23:55:56,719 | INFO     | mean y: 2456638.0166666666
[2026-02-04 08:57:00] 2026-02-03 23:55:56,719 | INFO     | intersect: -3933473066.8168936
[2026-02-04 08:57:00] 2026-02-03 23:55:56,719 | INFO     | chi2: 3.967417998659359e-05
[2026-02-04 08:57:00] 2026-02-03 23:55:56,720 | INFO     | current memory leak: 2.22 B/s (using 60 data points, chi2=0.00)
[2026-02-04 08:57:00] 2026-02-03 23:55:56,720 | INFO     | could have reported an average CPU frequency of 3317 MHz (7 samples)
[2026-02-04 08:57:00] 2026-02-03 23:55:56,720 | INFO     | ..............................
[2026-02-04 08:57:00] 2026-02-03 23:55:56,720 | INFO     | . Timing measurements:
[2026-02-04 08:57:00] 2026-02-03 23:55:56,720 | INFO     | . get job = 0 s
[2026-02-04 08:57:00] 2026-02-03 23:55:56,720 | INFO     | . initial setup = 12 s
[2026-02-04 08:57:00] 2026-02-03 23:55:56,720 | INFO     | . payload setup = 6 s
[2026-02-04 08:57:00] 2026-02-03 23:55:56,720 | INFO     | . stage-in = 0 s
[2026-02-04 08:57:00] 2026-02-03 23:55:56,720 | INFO     | . payload execution = 7070 s
[2026-02-04 08:57:00] 2026-02-03 23:55:56,721 | INFO     | . stage-out = 0 s
[2026-02-04 08:57:00] 2026-02-03 23:55:56,721 | INFO     | . log creation = 0 s
[2026-02-04 08:57:00] 2026-02-03 23:55:56,721 | INFO     | ..............................
[2026-02-04 08:57:00] 2026-02-03 23:55:56,791 | INFO     | 
[2026-02-04 08:57:00] 2026-02-03 23:55:56,791 | INFO     | job summary report
[2026-02-04 08:57:00] 2026-02-03 23:55:56,791 | INFO     | --------------------------------------------------
[2026-02-04 08:57:00] 2026-02-03 23:55:56,792 | INFO     | PanDA job id: 6993749590
[2026-02-04 08:57:00] 2026-02-03 23:55:56,792 | INFO     | task id: 48318042
[2026-02-04 08:57:00] 2026-02-03 23:55:56,792 | INFO     | errors: (none)
[2026-02-04 08:57:00] 2026-02-03 23:55:56,792 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 08:57:00] 2026-02-03 23:55:56,792 | INFO     | pilot state: finished 
[2026-02-04 08:57:00] 2026-02-03 23:55:56,792 | INFO     | transexitcode: 0
[2026-02-04 08:57:00] 2026-02-03 23:55:56,792 | INFO     | exeerrorcode: 0
[2026-02-04 08:57:00] 2026-02-03 23:55:56,792 | INFO     | exeerrordiag: 
[2026-02-04 08:57:00] 2026-02-03 23:55:56,792 | INFO     | exitcode: 0
[2026-02-04 08:57:00] 2026-02-03 23:55:56,792 | INFO     | exitmsg: OK
[2026-02-04 08:57:00] 2026-02-03 23:55:56,792 | INFO     | cpuconsumptiontime: 39630 s
[2026-02-04 08:57:00] 2026-02-03 23:55:56,792 | INFO     | nevents: 400
[2026-02-04 08:57:00] 2026-02-03 23:55:56,792 | INFO     | neventsw: 0
[2026-02-04 08:57:00] 2026-02-03 23:55:56,792 | INFO     | pid: 3913940
[2026-02-04 08:57:00] 2026-02-03 23:55:56,793 | INFO     | pgrp: 3913940
[2026-02-04 08:57:00] 2026-02-03 23:55:56,793 | INFO     | corecount: 6
[2026-02-04 08:57:00] 2026-02-03 23:55:56,793 | INFO     | event service: False
[2026-02-04 08:57:00] 2026-02-03 23:55:56,793 | INFO     | sizes: {0: 2278022, 1: 2278312, 11: 2278312, 7080: 2305593, 7081: 2314591, 7084: 2314969}
[2026-02-04 08:57:00] 2026-02-03 23:55:56,793 | INFO     | --------------------------------------------------
[2026-02-04 08:57:00] 2026-02-03 23:55:56,793 | INFO     | 
[2026-02-04 08:57:00] 2026-02-03 23:55:56,793 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2026-02-04 08:57:00] 2026-02-03 23:55:56,813 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 08:57:00] 2026-02-03 23:55:56,813 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 08:57:00] 2026-02-03 23:55:56,813 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 08:57:00] 2026-02-03 23:55:56,813 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 08:57:00] 2026-02-03 23:55:56,813 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 08:57:00] 2026-02-03 23:55:56,813 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 08:57:00] 2026-02-03 23:55:56,813 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 08:57:00] 2026-02-03 23:55:56,813 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 08:57:00] 2026-02-03 23:55:56,814 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 08:57:00] 2026-02-03 23:55:56,814 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 08:57:00] 2026-02-03 23:55:56,814 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 08:57:00] 2026-02-03 23:55:56,814 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 08:57:00] 2026-02-03 23:55:56,814 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 08:57:00] 2026-02-03 23:55:56,814 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 08:57:00] 2026-02-03 23:55:56,814 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 08:57:00] 2026-02-03 23:55:56,814 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 08:57:00] 2026-02-03 23:55:56,814 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 08:57:00] 2026-02-03 23:55:56,814 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 08:57:00] 2026-02-03 23:55:56,814 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 08:57:00] 2026-02-03 23:55:56,814 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 08:57:00] 2026-02-03 23:55:56,814 | INFO     | job 6993749590 has completed (purged errors)
[2026-02-04 08:57:00] 2026-02-03 23:55:56,814 | INFO     | overall cleanup function is called
[2026-02-04 08:57:00] 2026-02-03 23:55:57,524 | WARNING  | process 3913940 can no longer be monitored (due to stat problems) - aborting
[2026-02-04 08:57:00] 2026-02-03 23:55:57,595 | INFO     | using path: /var/lib/boinc/slots/5/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 08:57:00] 2026-02-03 23:55:57,674 | INFO     | number of running child processes to parent process 3913940: 1
[2026-02-04 08:57:00] 2026-02-03 23:55:57,674 | INFO     | maximum number of monitored processes: 6
[2026-02-04 08:57:00] 2026-02-03 23:55:57,674 | INFO     | aborting job monitoring since job object (job id=6993749590) has expired
[2026-02-04 08:57:00] 2026-02-03 23:55:57,821 | INFO     | --- collectZombieJob: --- 10, [3913940]
[2026-02-04 08:57:00] 2026-02-03 23:55:57,821 | INFO     | zombie collector waiting for pid 3913940
[2026-02-04 08:57:00] 2026-02-03 23:55:57,821 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 08:57:00] 2026-02-03 23:55:57,821 | INFO     | collected zombie processes
[2026-02-04 08:57:00] 2026-02-03 23:55:57,821 | INFO     | will attempt to kill all subprocesses of pid=3913940
[2026-02-04 08:57:00] 2026-02-03 23:55:57,919 | INFO     | process IDs to be killed: [3913940] (in reverse order)
[2026-02-04 08:57:00] 2026-02-03 23:55:57,963 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 08:57:00] 2026-02-03 23:55:57,963 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 08:57:00] 2026-02-03 23:55:57,966 | INFO     | did not find any defunct processes belonging to 3913940
[2026-02-04 08:57:00] 2026-02-03 23:55:57,969 | INFO     | did not find any defunct processes belonging to 3913940
[2026-02-04 08:57:00] 2026-02-03 23:55:57,969 | INFO     | ready for new job
[2026-02-04 08:57:00] 2026-02-03 23:55:57,969 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 08:57:00] 2026-02-03 23:55:57,970 | INFO     | **************************************
[2026-02-04 08:57:00] 2026-02-03 23:55:57,971 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 08:57:00] 2026-02-03 23:55:57,971 | INFO     | **************************************
[2026-02-04 08:57:00] 2026-02-03 23:55:57,971 | INFO     | 
[2026-02-04 08:57:00] 2026-02-03 23:55:57,972 | INFO     | architecture information:
[2026-02-04 08:57:00] 2026-02-03 23:55:57,972 | INFO     | executing command: cat /etc/os-release
[2026-02-04 08:57:00] 2026-02-03 23:55:57,985 | INFO     | cat /etc/os-release:
[2026-02-04 08:57:00] NAME="CentOS Linux"
[2026-02-04 08:57:00] VERSION="7 (Core)"
[2026-02-04 08:57:00] ID="centos"
[2026-02-04 08:57:00] ID_LIKE="rhel fedora"
[2026-02-04 08:57:00] VERSION_ID="7"
[2026-02-04 08:57:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 08:57:00] ANSI_COLOR="0;31"
[2026-02-04 08:57:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 08:57:00] HOME_URL="https://www.centos.org/"
[2026-02-04 08:57:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 08:57:00] 
[2026-02-04 08:57:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 08:57:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 08:57:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 08:57:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 08:57:00] 
[2026-02-04 08:57:00] 2026-02-03 23:55:57,985 | INFO     | **************************************
[2026-02-04 08:57:00] 2026-02-03 23:55:58,488 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2026-02-04 08:57:00] 2026-02-03 23:55:58,503 | INFO     | sufficient remaining disk space (91962212352 B)
[2026-02-04 08:57:00] 2026-02-03 23:55:58,503 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 08:57:00] 2026-02-03 23:55:58,503 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 08:57:00] 2026-02-03 23:55:58,503 | INFO     | update_server=False
[2026-02-04 08:57:00] 2026-02-03 23:55:58,503 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 08:57:00] 2026-02-03 23:55:58,503 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 08:57:00] 2026-02-03 23:55:58,504 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 08:57:00] 2026-02-03 23:55:58,504 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 08:57:00] 2026-02-03 23:55:58,504 | INFO     | will abort loop
[2026-02-04 08:57:00] 2026-02-03 23:55:58,593 | INFO     | all job control threads have been joined
[2026-02-04 08:57:00] 2026-02-03 23:55:58,797 | INFO     | all payload control threads have been joined
[2026-02-04 08:57:00] 2026-02-03 23:55:59,197 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 08:57:00] 2026-02-03 23:55:59,315 | INFO     | all data control threads have been joined
[2026-02-04 08:57:00] 2026-02-03 23:55:59,508 | INFO     | [job] retrieve thread has finished
[2026-02-04 08:57:00] 2026-02-03 23:55:59,509 | INFO     | [job] queue monitor thread has finished
[2026-02-04 08:57:00] 2026-02-03 23:55:59,509 | INFO     | [job] job monitor thread has finished
[2026-02-04 08:57:00] 2026-02-03 23:55:59,598 | INFO     | [job] control thread has finished
[2026-02-04 08:57:00] 2026-02-03 23:55:59,769 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 08:57:00] 2026-02-03 23:55:59,802 | INFO     | [payload] control thread has finished
[2026-02-04 08:57:00] 2026-02-03 23:55:59,835 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 08:57:00] 2026-02-03 23:56:00,276 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 08:57:00] 2026-02-03 23:56:00,306 | INFO     | [payload] validate_post thread has finished
[2026-02-04 08:57:00] 2026-02-03 23:56:00,320 | INFO     | [data] control thread has finished
[2026-02-04 08:57:00] 2026-02-03 23:56:00,370 | INFO     | [payload] failed_post thread has finished
[2026-02-04 08:57:00] 2026-02-03 23:56:00,502 | INFO     | [job] validate thread has finished
[2026-02-04 08:57:00] 2026-02-03 23:56:00,879 | INFO     | [data] copytool_in thread has finished
[2026-02-04 08:57:00] 2026-02-03 23:56:01,202 | INFO     | [data] copytool_out thread has finished
[2026-02-04 08:57:00] 2026-02-03 23:56:02,509 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 08:57:00] 2026-02-03 23:56:08,608 | INFO     | job.realtimelogging is not enabled
[2026-02-04 08:57:00] 2026-02-03 23:56:09,613 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 08:57:00] 2026-02-03 23:56:29,342 | INFO     | PID=3909338 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-04 08:57:00] 2026-02-03 23:56:29,342 | INFO     | .. there are 2 such processes running
[2026-02-04 08:57:00] 2026-02-03 23:56:29,343 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 08:57:00] 2026-02-03 23:56:29,343 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 08:57:00] 2026-02-03 23:56:29,343 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 08:57:00] 2026-02-03 23:56:53,768 | INFO     | [monitor] cgroup control has ended
[2026-02-04 08:57:00] 2026-02-03 23:56:54,942 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140482506970944)>', '<ExcThread(monitor, started 140482072016640)>']
[2026-02-04 08:57:00] 2026-02-03 23:56:55,473 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 08:57:00] 2026-02-03 23:56:55,473 | INFO     | [monitor] control thread has ended
[2026-02-04 08:57:00] 2026-02-03 23:56:59,967 | INFO     | all workflow threads have been joined
[2026-02-04 08:57:00] 2026-02-03 23:56:59,967 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 08:57:00] 2026-02-03 23:56:59,967 | INFO     | traces error code: 0
[2026-02-04 08:57:00] 2026-02-03 23:56:59,967 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 08:57:00] 2026-02-03 23:57:00,068 [wrapper] ==== pilot stdout END ====
[2026-02-04 08:57:00] 2026-02-03 23:57:00,071 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 08:57:00] 2026-02-03 23:57:00,073 [wrapper] pilotpid: 3909338
[2026-02-04 08:57:00] 2026-02-03 23:57:00,075 [wrapper] Pilot exit status: 0
[2026-02-04 08:57:00] 2026-02-03 23:57:00,085 [wrapper] pandaids: 6993749590
[2026-02-04 08:57:00] 2026-02-03 23:57:00,111 [wrapper] cleanup supervisor_pilot 3932461 3909339
[2026-02-04 08:57:00] 2026-02-03 23:57:00,117 [wrapper] Test setup, not cleaning
[2026-02-04 08:57:00] 2026-02-03 23:57:00,119 [wrapper] apfmon messages muted
[2026-02-04 08:57:00] 2026-02-03 23:57:00,121 [wrapper] ==== wrapper stdout END ====
[2026-02-04 08:57:00] 2026-02-03 23:57:00,124 [wrapper] ==== wrapper stderr END ====
[2026-02-04 08:57:00]  *** Error codes and diagnostics ***
[2026-02-04 08:57:00]     "exeErrorCode": 0,
[2026-02-04 08:57:00]     "exeErrorDiag": "",
[2026-02-04 08:57:00]     "pilotErrorCode": 0,
[2026-02-04 08:57:00]     "pilotErrorDiag": "",
[2026-02-04 08:57:00]  *** Listing of results directory ***
[2026-02-04 08:57:00] total 672988
[2026-02-04 08:57:00] -rw-r--r--. 1 boinc boinc    584422 Feb  3 18:31 pilot3.tar.gz
[2026-02-04 08:57:00] -rwx------. 1 boinc boinc     36322 Feb  3 18:34 runpilot2-wrapper.sh
[2026-02-04 08:57:00] -rw-r--r--. 1 boinc boinc      5111 Feb  3 18:37 queuedata.json
[2026-02-04 08:57:00] -rw-r--r--. 1 boinc boinc       100 Feb  4 06:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 08:57:00] -rwxr-xr-x. 1 boinc boinc      7986 Feb  4 06:55 run_atlas
[2026-02-04 08:57:00] -rw-r--r--. 1 boinc boinc       105 Feb  4 06:55 job.xml
[2026-02-04 08:57:00] -rw-r--r--. 1 boinc boinc      9356 Feb  4 06:55 init_data.xml
[2026-02-04 08:57:00] -rw-r--r--. 2 boinc boinc 497223046 Feb  4 06:55 EVNT.48318040._000130.pool.root.1
[2026-02-04 08:57:00] -rw-r--r--. 2 boinc boinc     15845 Feb  4 06:55 start_atlas.sh
[2026-02-04 08:57:00] drwxrwx--x. 2 boinc boinc        68 Feb  4 06:55 shared
[2026-02-04 08:57:00] -rw-r--r--. 2 boinc boinc    597762 Feb  4 06:55 input.tar.gz
[2026-02-04 08:57:00] -rw-r--r--. 1 boinc boinc         0 Feb  4 06:55 boinc_lockfile
[2026-02-04 08:57:00] -rw-r--r--. 1 boinc boinc      2535 Feb  4 06:56 pandaJob.out
[2026-02-04 08:57:00] -rw-------. 1 boinc boinc   1009252 Feb  4 06:57 agis_schedconf.cvmfs.json
[2026-02-04 08:57:00] -rw-------. 1 boinc boinc   1511668 Feb  4 06:57 agis_ddmendpoints.agis.ALL.json
[2026-02-04 08:57:00] -rw-------. 1 boinc boinc       424 Feb  4 06:57 workernode_map.json
[2026-02-04 08:57:00] drwx------. 5 boinc boinc      4096 Feb  4 06:57 pilot3
[2026-02-04 08:57:00] -rw-------. 1 boinc boinc 185246164 Feb  4 08:55 HITS.48318042._006732.pool.root.1
[2026-02-04 08:57:00] -rw-r--r--. 1 boinc boinc       530 Feb  4 08:55 boinc_task_state.xml
[2026-02-04 08:57:00] -rw-------. 1 boinc boinc      1031 Feb  4 08:55 memory_monitor_summary.json
[2026-02-04 08:57:00] -rw-------. 1 boinc boinc    337858 Feb  4 08:55 log.48318042._006732.job.log.tgz.1
[2026-02-04 08:57:00] -rw-------. 1 boinc boinc      6296 Feb  4 08:55 heartbeat.json
[2026-02-04 08:57:00] -rw-------. 1 boinc boinc        95 Feb  4 08:56 pilot_heartbeat.json
[2026-02-04 08:57:00] -rw-r--r--. 1 boinc boinc      8192 Feb  4 08:56 boinc_mmap_file
[2026-02-04 08:57:00] -rw-r--r--. 1 boinc boinc        27 Feb  4 08:56 wrapper_checkpoint.txt
[2026-02-04 08:57:00] -rw-------. 1 boinc boinc      4893 Feb  4 08:56 pilotlog.txt
[2026-02-04 08:57:00] -rw-------. 1 boinc boinc   1030507 Feb  4 08:57 log.48318042._006732.job.log.1
[2026-02-04 08:57:00] -rw-------. 1 boinc boinc       357 Feb  4 08:57 output.list
[2026-02-04 08:57:00] -rw-r--r--. 1 boinc boinc       620 Feb  4 08:57 runtime_log
[2026-02-04 08:57:00] -rw-------. 1 boinc boinc   1382400 Feb  4 08:57 result.tar.gz
[2026-02-04 08:57:00] -rw-r--r--. 1 boinc boinc      8774 Feb  4 08:57 runtime_log.err
[2026-02-04 08:57:00] -rw-------. 1 boinc boinc       643 Feb  4 08:57 0BVKDmFzR78n9Rq4apOajLDm4fhM0noT9bVooX4SDmWNUKDm2pd5Ro.diag
[2026-02-04 08:57:00] -rw-r--r--. 1 boinc boinc     20848 Feb  4 08:57 stderr.txt
[2026-02-04 08:57:00] HITS file was successfully produced:
[2026-02-04 08:57:00] -rw-------. 1 boinc boinc 185246164 Feb  4 08:55 shared/HITS.pool.root.1
[2026-02-04 08:57:00]  *** Contents of shared directory: ***
[2026-02-04 08:57:00] total 668436
[2026-02-04 08:57:00] -rw-r--r--. 2 boinc boinc 497223046 Feb  4 06:55 ATLAS.root_0
[2026-02-04 08:57:00] -rw-r--r--. 2 boinc boinc     15845 Feb  4 06:55 start_atlas.sh
[2026-02-04 08:57:00] -rw-r--r--. 2 boinc boinc    597762 Feb  4 06:55 input.tar.gz
[2026-02-04 08:57:00] -rw-------. 1 boinc boinc 185246164 Feb  4 08:55 HITS.pool.root.1
[2026-02-04 08:57:00] -rw-------. 1 boinc boinc   1382400 Feb  4 08:57 result.tar.gz
08:57:01 (3905238): run_atlas exited; CPU time 39713.259030
08:57:01 (3905238): called boinc_finish(0)

</stderr_txt>
]]>

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