Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:44:05 (3548400): wrapper (7.7.26015): starting
05:44:05 (3548400): wrapper: running run_atlas (--nthreads 12)
[2026-02-03 05:44:05] Arguments: --nthreads 12
[2026-02-03 05:44:05] Threads: 12
[2026-02-03 05:44:05] Checking for CVMFS
[2026-02-03 05:44:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-03 05:44:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-03 05:44:06] Running cvmfs_config stat atlas.cern.ch
[2026-02-03 05:44:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-03 05:44:06] 2.11.5.0 3627452 127510 210988 155831 2 280 23139291 45563854 15746 130560 0 1070777339 99.811 637015800 23006 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2026-02-03 05:44:06] CVMFS is ok
[2026-02-03 05:44:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-03 05:44:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-03 05:44:06] Further information can be found at the LHC@home message board.
[2026-02-03 05:44:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 05:44:06] Checking for apptainer binary...
[2026-02-03 05:44:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-03 05:44:06] Running /usr/bin/apptainer --version
[2026-02-03 05:44:07] apptainer version 1.4.1-1.el9
[2026-02-03 05:44:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 05:44:07] wns0050.triumf.lcg
[2026-02-03 05:44:07] apptainer works
[2026-02-03 05:44:08] Set ATHENA_PROC_NUMBER=12
[2026-02-03 05:44:08] Set ATHENA_CORE_NUMBER=12
[2026-02-03 05:44:08] Starting ATLAS job with PandaID=6994083815
[2026-02-03 05:44:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-03 05:48:54]  *** The last 200 lines of the pilot log: ***
[2026-02-03 05:48:54] 2026-02-03 13:48:10,790 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-03 05:48:54] 2026-02-03 13:48:10,799 | WARNING  | wrong length of table data, x=[1770126337.0], y=[1301.0] (must be same and length>=4)
[2026-02-03 05:48:54] 2026-02-03 13:48:10,799 | INFO     | could have reported an average CPU frequency of 2678 MHz (4 samples)
[2026-02-03 05:48:54] 2026-02-03 13:48:10,799 | INFO     | ..............................
[2026-02-03 05:48:54] 2026-02-03 13:48:10,799 | INFO     | . Timing measurements:
[2026-02-03 05:48:54] 2026-02-03 13:48:10,800 | INFO     | . get job = 0 s
[2026-02-03 05:48:54] 2026-02-03 13:48:10,800 | INFO     | . initial setup = 17 s
[2026-02-03 05:48:54] 2026-02-03 13:48:10,800 | INFO     | . payload setup = 18 s
[2026-02-03 05:48:54] 2026-02-03 13:48:10,800 | INFO     | . stage-in = 0 s
[2026-02-03 05:48:54] 2026-02-03 13:48:10,800 | INFO     | . payload execution = 47 s
[2026-02-03 05:48:54] 2026-02-03 13:48:10,800 | INFO     | . stage-out = 0 s
[2026-02-03 05:48:54] 2026-02-03 13:48:10,800 | INFO     | . log creation = 0 s
[2026-02-03 05:48:54] 2026-02-03 13:48:10,800 | INFO     | ..............................
[2026-02-03 05:48:54] 2026-02-03 13:48:10,800 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-03 05:48:54] 2026-02-03 13:48:10,800 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6994083815/pilotlog.txt
[2026-02-03 05:48:54] 2026-02-03 13:48:10,840 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-03 05:48:54] - Log from pilotlog.txt -
[2026-02-03 05:48:54] 2026-02-03 13:48:10,790 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6994083815/memory_monitor_summary.json (trf name=prmon)
[2026-02-03 05:48:54] 2026-02-03 13:48:10,790 | INFO     | extracted standard info from prmon json
[2026-02-03 05:48:54] 2026-02-03 13:48:10,790 | INFO     | extracted standard memory fields from prmon json
[2026-02-03 05:48:54] 2026-02-03 13:48:10,790 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-03 05:48:54] 2026-02-03 13:48:10,790 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-03 05:48:54] 2026-02-03 13:48:10,790 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-03 05:48:54] 2026-02-03 13:48:10,799 | WARNING  | wrong length of table data, x=[1770126337.0], y=[1301.0] (must be same and length>=4)
[2026-02-03 05:48:54] 2026-02-03 13:48:10,799 | INFO     | could have reported an average CPU frequency of 2678 MHz (4 samples)
[2026-02-03 05:48:54] 2026-02-03 13:48:10,799 | INFO     | ..............................
[2026-02-03 05:48:54] 2026-02-03 13:48:10,799 | INFO     | . Timing measurements:
[2026-02-03 05:48:54] 2026-02-03 13:48:10,800 | INFO     | . get job = 0 s
[2026-02-03 05:48:54] 2026-02-03 13:48:10,800 | INFO     | . initial setup = 17 s
[2026-02-03 05:48:54] 2026-02-03 13:48:10,800 | INFO     | . payload setup = 18 s
[2026-02-03 05:48:54] 2026-02-03 13:48:10,800 | INFO     | . stage-in = 0 s
[2026-02-03 05:48:54] 2026-02-03 13:48:10,800 | INFO     | . payload execution = 47 s
[2026-02-03 05:48:54] 2026-02-03 13:48:10,800 | INFO     | . stage-out = 0 s
[2026-02-03 05:48:54] 2026-02-03 13:48:10,800 | INFO     | . log creation = 0 s
[2026-02-03 05:48:54] 2026-02-03 13:48:10,800 | INFO     | ..............................
[2026-02-03 05:48:54] 2026-02-03 13:48:10,800 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-03 05:48:54] 2026-02-03 13:48:10,800 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6994083815/pilotlog.txt
[2026-02-03 05:48:54] 2026-02-03 13:48:10,847 | WARNING  | 
[2026-02-03 05:48:54] [begin log extracts]
[2026-02-03 05:48:54] - Log from pilotlog.txt -
[2026-02-03 05:48:54] 2026-02-03 13:48:10,790 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6994083815/memory_monitor_summary.json (trf name=prmon)
[2026-02-03 05:48:54] 2026-02-03 13:48:10,790 | INFO     | extracted standard info from prmon json
[2026-02-03 05:48:54] 2026-02-03 13:48:10,790 | INFO     | extracted standard memory fields from prmon json
[2026-02-03 05:48:54] 2026-02-03 13:48:10,790 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-03 05:48:54] 2026-02-03 13:48:10,790 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-03 05:48:54] 2026-02-03 13:48:10,790 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-03 05:48:54] 2026-02-03 13:48:10,799 | WARNING  | wrong length of table data, x=[1770126337.0], y=[1301.0] (must be same and length>=4)
[2026-02-03 05:48:54] 2026-02-03 13:48:10,799 | INFO     | could have reported an average CPU frequency of 2678 MHz (4 samples)
[2026-02-03 05:48:54] 2026-02-03 13:48:10,799 | INFO     | ..............................
[2026-02-03 05:48:54] 2026-02-03 13:48:10,799 | INFO     | . Timing measurements:
[2026-02-03 05:48:54] 2026-02-03 13:48:10,800 | INFO     | . get job = 0 s
[2026-02-03 05:48:54] 2026-02-03 13:48:10,800 | INFO     | . initial setup = 17 s
[2026-02-03 05:48:54] 2026-02-03 13:48:10,800 | INFO     | . payload setup = 18 s
[2026-02-03 05:48:54] 2026-02-03 13:48:10,800 | INFO     | . stage-in = 0 s
[2026-02-03 05:48:54] 2026-02-03 13:48:10,800 | INFO     | . payload execution = 47 s
[2026-02-03 05:48:54] 2026-02-03 13:48:10,800 | INFO     | . stage-out = 0 s
[2026-02-03 05:48:54] 2026-02-03 13:48:10,800 | INFO     | . log creation = 0 s
[2026-02-03 05:48:54] 2026-02-03 13:48:10,800 | INFO     | ..............................
[2026-02-03 05:48:54] 2026-02-03 13:48:10,800 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-03 05:48:54] 2026-02-03 13:48:10,800 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6994083815/pilotlog.txt
[2026-02-03 05:48:54] [end log extracts]
[2026-02-03 05:48:54] 2026-02-03 13:48:10,847 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-03 05:48:54] 2026-02-03 13:48:10,850 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-03 05:48:54] 2026-02-03 13:48:11,445 | INFO     | 
[2026-02-03 05:48:54] 2026-02-03 13:48:11,445 | INFO     | job summary report
[2026-02-03 05:48:54] 2026-02-03 13:48:11,445 | INFO     | --------------------------------------------------
[2026-02-03 05:48:54] 2026-02-03 13:48:11,445 | INFO     | PanDA job id: 6994083815
[2026-02-03 05:48:54] 2026-02-03 13:48:11,445 | INFO     | task id: 48442098
[2026-02-03 05:48:54] 2026-02-03 13:48:11,445 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-03 05:46:00,611 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-03 05:48:54] 2026-02-03 13:48:11,445 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-03 05:48:54] 2026-02-03 13:48:11,445 | INFO     | pilot state: failed 
[2026-02-03 05:48:54] 2026-02-03 13:48:11,445 | INFO     | transexitcode: 65
[2026-02-03 05:48:54] 2026-02-03 13:48:11,445 | INFO     | exeerrorcode: 65
[2026-02-03 05:48:54] 2026-02-03 13:48:11,445 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-03 05:48:54] 2026-02-03 13:48:11,446 | INFO     | exitcode: 65
[2026-02-03 05:48:54] 2026-02-03 13:48:11,446 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-03 05:48:54] 2026-02-03 13:48:11,446 | INFO     | cpuconsumptiontime: 13 s
[2026-02-03 05:48:54] 2026-02-03 13:48:11,446 | INFO     | nevents: 0
[2026-02-03 05:48:54] 2026-02-03 13:48:11,446 | INFO     | neventsw: 0
[2026-02-03 05:48:54] 2026-02-03 13:48:11,446 | INFO     | pid: 3560704
[2026-02-03 05:48:54] 2026-02-03 13:48:11,446 | INFO     | pgrp: 3560704
[2026-02-03 05:48:54] 2026-02-03 13:48:11,446 | INFO     | corecount: 12
[2026-02-03 05:48:54] 2026-02-03 13:48:11,446 | INFO     | event service: False
[2026-02-03 05:48:54] 2026-02-03 13:48:11,446 | INFO     | sizes: {0: 2277768, 1: 2278285, 12: 2278285, 70: 2301558, 72: 2305850, 75: 2305878, 191: 2306172}
[2026-02-03 05:48:54] 2026-02-03 13:48:11,446 | INFO     | --------------------------------------------------
[2026-02-03 05:48:54] 2026-02-03 13:48:11,446 | INFO     | 
[2026-02-03 05:48:54] 2026-02-03 13:48:11,446 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-03 05:48:54] 2026-02-03 13:48:11,498 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-03 05:48:54] 2026-02-03 13:48:11,498 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-03 05:48:54] 2026-02-03 13:48:11,498 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-03 05:48:54] 2026-02-03 13:48:11,498 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-03 05:48:54] 2026-02-03 13:48:11,498 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-03 05:48:54] 2026-02-03 13:48:11,498 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-03 05:48:54] 2026-02-03 13:48:11,498 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-03 05:48:54] 2026-02-03 13:48:11,498 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-03 05:48:54] 2026-02-03 13:48:11,499 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-03 05:48:54] 2026-02-03 13:48:11,499 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-03 05:48:54] 2026-02-03 13:48:11,499 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-03 05:48:54] 2026-02-03 13:48:11,499 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-03 05:48:54] 2026-02-03 13:48:11,499 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-03 05:48:54] 2026-02-03 13:48:11,499 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-03 05:48:54] 2026-02-03 13:48:11,499 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-03 05:48:54] 2026-02-03 13:48:11,499 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-03 05:48:54] 2026-02-03 13:48:11,499 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-03 05:48:54] 2026-02-03 13:48:11,499 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-03 05:48:54] 2026-02-03 13:48:11,499 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-03 05:48:54] 2026-02-03 13:48:11,499 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-03 05:48:54] 2026-02-03 13:48:11,499 | INFO     | job 6994083815 has completed (purged errors)
[2026-02-03 05:48:54] 2026-02-03 13:48:11,499 | INFO     | overall cleanup function is called
[2026-02-03 05:48:54] 2026-02-03 13:48:11,636 | INFO     | PID=3555501 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-03 05:48:54] 2026-02-03 13:48:11,636 | INFO     | .. there are 35 such processes running
[2026-02-03 05:48:54] 2026-02-03 13:48:12,506 | INFO     | --- collectZombieJob: --- 10, [3560704]
[2026-02-03 05:48:54] 2026-02-03 13:48:12,506 | INFO     | zombie collector waiting for pid 3560704
[2026-02-03 05:48:54] 2026-02-03 13:48:12,506 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-03 05:48:54] 2026-02-03 13:48:12,506 | INFO     | collected zombie processes
[2026-02-03 05:48:54] 2026-02-03 13:48:12,506 | INFO     | will attempt to kill all subprocesses of pid=3560704
[2026-02-03 05:48:54] 2026-02-03 13:48:12,710 | INFO     | process IDs to be killed: [3560704] (in reverse order)
[2026-02-03 05:48:54] 2026-02-03 13:48:13,022 | WARNING  | found no corresponding commands to process id(s)
[2026-02-03 05:48:54] 2026-02-03 13:48:13,024 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-03 05:48:54] 2026-02-03 13:48:13,070 | INFO     | did not find any defunct processes belonging to 3560704
[2026-02-03 05:48:54] 2026-02-03 13:48:13,121 | INFO     | did not find any defunct processes belonging to 3560704
[2026-02-03 05:48:54] 2026-02-03 13:48:13,121 | INFO     | ready for new job
[2026-02-03 05:48:54] 2026-02-03 13:48:13,121 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-03 05:48:54] 2026-02-03 13:48:13,123 | INFO     | **************************************
[2026-02-03 05:48:54] 2026-02-03 13:48:13,123 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-03 05:48:54] 2026-02-03 13:48:13,123 | INFO     | **************************************
[2026-02-03 05:48:54] 2026-02-03 13:48:13,123 | INFO     | 
[2026-02-03 05:48:54] 2026-02-03 13:48:13,129 | INFO     | architecture information:
[2026-02-03 05:48:54] 2026-02-03 13:48:13,136 | INFO     | executing command: cat /etc/os-release
[2026-02-03 05:48:54] 2026-02-03 13:48:13,216 | INFO     | cat /etc/os-release:
[2026-02-03 05:48:54] NAME="CentOS Linux"
[2026-02-03 05:48:54] VERSION="7 (Core)"
[2026-02-03 05:48:54] ID="centos"
[2026-02-03 05:48:54] ID_LIKE="rhel fedora"
[2026-02-03 05:48:54] VERSION_ID="7"
[2026-02-03 05:48:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-03 05:48:54] ANSI_COLOR="0;31"
[2026-02-03 05:48:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-03 05:48:54] HOME_URL="https://www.centos.org/"
[2026-02-03 05:48:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-03 05:48:54] 
[2026-02-03 05:48:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-03 05:48:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-03 05:48:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-03 05:48:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-03 05:48:54] 
[2026-02-03 05:48:54] 2026-02-03 13:48:13,216 | INFO     | **************************************
[2026-02-03 05:48:54] 2026-02-03 13:48:13,720 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-03 05:48:54] 2026-02-03 13:48:13,734 | INFO     | sufficient remaining disk space (2149202264064 B)
[2026-02-03 05:48:54] 2026-02-03 13:48:13,734 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-03 05:48:54] 2026-02-03 13:48:13,734 | INFO     | current server update state: UPDATING_FINAL
[2026-02-03 05:48:54] 2026-02-03 13:48:13,734 | INFO     | update_server=False
[2026-02-03 05:48:54] 2026-02-03 13:48:13,734 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-03 05:48:54] 2026-02-03 13:48:13,734 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-03 05:48:54] 2026-02-03 13:48:13,735 | INFO     | aborting loop
[2026-02-03 05:48:54] 2026-02-03 13:48:13,735 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-03 05:48:54] 2026-02-03 13:48:14,515 | INFO     | all data control threads have been joined
[2026-02-03 05:48:54] 2026-02-03 13:48:14,741 | INFO     | [job] retrieve thread has finished
[2026-02-03 05:48:54] 2026-02-03 13:48:14,741 | INFO     | [job] job monitor thread has finished
[2026-02-03 05:48:54] 2026-02-03 13:48:14,872 | INFO     | all payload control threads have been joined
[2026-02-03 05:48:54] 2026-02-03 13:48:14,976 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-03 05:48:54] 2026-02-03 13:48:15,054 | INFO     | [payload] validate_pre thread has finished
[2026-02-03 05:48:54] 2026-02-03 13:48:15,142 | INFO     | [job] create_data_payload thread has finished
[2026-02-03 05:48:54] 2026-02-03 13:48:15,172 | INFO     | [payload] validate_post thread has finished
[2026-02-03 05:48:54] 2026-02-03 13:48:15,387 | INFO     | all job control threads have been joined
[2026-02-03 05:48:54] 2026-02-03 13:48:15,420 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-03 05:48:54] 2026-02-03 13:48:15,506 | INFO     | [payload] execute_payloads thread has finished
[2026-02-03 05:48:54] 2026-02-03 13:48:15,521 | INFO     | [data] control thread has finished
[2026-02-03 05:48:54] 2026-02-03 13:48:15,538 | INFO     | [data] copytool_in thread has finished
[2026-02-03 05:48:54] 2026-02-03 13:48:15,884 | INFO     | [payload] control thread has finished
[2026-02-03 05:48:54] 2026-02-03 13:48:16,139 | INFO     | [payload] failed_post thread has finished
[2026-02-03 05:48:54] 2026-02-03 13:48:16,237 | INFO     | [job] validate thread has finished
[2026-02-03 05:48:54] 2026-02-03 13:48:16,354 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-03 05:48:54] 2026-02-03 13:48:16,393 | INFO     | [job] control thread has finished
[2026-02-03 05:48:54] 2026-02-03 13:48:16,983 | INFO     | [data] copytool_out thread has finished
[2026-02-03 05:48:54] 2026-02-03 13:48:17,360 | INFO     | [job] queue monitor thread has finished
[2026-02-03 05:48:54] 2026-02-03 13:48:17,743 | INFO     | [data] queue_monitor thread has finished
[2026-02-03 05:48:54] 2026-02-03 13:48:43,972 | INFO     | PID=3555501 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-03 05:48:54] 2026-02-03 13:48:43,972 | INFO     | .. there are 35 such processes running
[2026-02-03 05:48:54] 2026-02-03 13:48:43,973 | INFO     | found 0 job(s) in 20 queues
[2026-02-03 05:48:54] 2026-02-03 13:48:43,973 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-03 05:48:54] 2026-02-03 13:48:43,973 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-03 05:48:54] 2026-02-03 13:48:46,646 | INFO     | [monitor] cgroup control has ended
[2026-02-03 05:48:54] 2026-02-03 13:48:48,442 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140378863904576)>', '<ExcThread(monitor, started 140378535593728)>']
[2026-02-03 05:48:54] 2026-02-03 13:48:49,011 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-03 05:48:54] 2026-02-03 13:48:49,011 | INFO     | [monitor] control thread has ended
[2026-02-03 05:48:54] 2026-02-03 13:48:53,468 | INFO     | all workflow threads have been joined
[2026-02-03 05:48:54] 2026-02-03 13:48:53,468 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-03 05:48:54] 2026-02-03 13:48:53,468 | INFO     | traces error code: 0
[2026-02-03 05:48:54] 2026-02-03 13:48:53,468 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-03 05:48:54] 2026-02-03 13:48:53,688 [wrapper] ==== pilot stdout END ====
[2026-02-03 05:48:54] 2026-02-03 13:48:53,696 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-03 05:48:54] 2026-02-03 13:48:53,699 [wrapper] pilotpid: 3555501
[2026-02-03 05:48:54] 2026-02-03 13:48:53,701 [wrapper] Pilot exit status: 0
[2026-02-03 05:48:54] 2026-02-03 13:48:53,711 [wrapper] pandaids: 6994083815
[2026-02-03 05:48:54] 2026-02-03 13:48:53,759 [wrapper] cleanup supervisor_pilot 3555508 3555502
[2026-02-03 05:48:54] 2026-02-03 13:48:53,762 [wrapper] Test setup, not cleaning
[2026-02-03 05:48:54] 2026-02-03 13:48:53,764 [wrapper] apfmon messages muted
[2026-02-03 05:48:54] 2026-02-03 13:48:53,765 [wrapper] ==== wrapper stdout END ====
[2026-02-03 05:48:54] 2026-02-03 13:48:53,767 [wrapper] ==== wrapper stderr END ====
[2026-02-03 05:48:54]  *** Error codes and diagnostics ***
[2026-02-03 05:48:54]     "exeErrorCode": 65,
[2026-02-03 05:48:54]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-03 05:48:54]     "pilotErrorCode": 1305,
[2026-02-03 05:48:54]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-03 05:48:54]  *** Listing of results directory ***
[2026-02-03 05:48:54] total 491996
[2026-02-03 05:48:54] -rw-r--r--. 1 boinc boinc    584422 Feb  3 01:31 pilot3.tar.gz
[2026-02-03 05:48:54] -rwx------. 1 boinc boinc     36322 Feb  3 01:31 runpilot2-wrapper.sh
[2026-02-03 05:48:54] -rw-r--r--. 1 boinc boinc      5111 Feb  3 01:33 queuedata.json
[2026-02-03 05:48:54] -rw-r--r--. 1 boinc boinc       100 Feb  3 05:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-03 05:48:54] -rwxr-xr-x. 1 boinc boinc      7986 Feb  3 05:44 run_atlas
[2026-02-03 05:48:54] -rw-r--r--. 1 boinc boinc       105 Feb  3 05:44 job.xml
[2026-02-03 05:48:54] -rw-r--r--. 1 boinc boinc      6593 Feb  3 05:44 init_data.xml
[2026-02-03 05:48:54] -rw-r--r--. 2 boinc boinc 499655199 Feb  3 05:44 EVNT.48442096._000005.pool.root.1
[2026-02-03 05:48:54] drwxrwx--x. 2 boinc boinc      4096 Feb  3 05:44 shared
[2026-02-03 05:48:54] -rw-r--r--. 2 boinc boinc    597747 Feb  3 05:44 input.tar.gz
[2026-02-03 05:48:54] -rw-r--r--. 2 boinc boinc     15845 Feb  3 05:44 start_atlas.sh
[2026-02-03 05:48:54] -rw-r--r--. 1 boinc boinc         0 Feb  3 05:44 boinc_lockfile
[2026-02-03 05:48:54] -rw-r--r--. 1 boinc boinc      2520 Feb  3 05:44 pandaJob.out
[2026-02-03 05:48:54] -rw-------. 1 boinc boinc   1009258 Feb  3 05:44 agis_schedconf.cvmfs.json
[2026-02-03 05:48:54] -rw-------. 1 boinc boinc   1511668 Feb  3 05:44 agis_ddmendpoints.agis.ALL.json
[2026-02-03 05:48:54] -rw-------. 1 boinc boinc       445 Feb  3 05:44 workernode_map.json
[2026-02-03 05:48:54] drwx------. 5 boinc boinc      4096 Feb  3 05:44 pilot3
[2026-02-03 05:48:54] -rw-r--r--. 1 boinc boinc       523 Feb  3 05:46 boinc_task_state.xml
[2026-02-03 05:48:54] -rw-------. 1 boinc boinc       961 Feb  3 05:46 memory_monitor_summary.json
[2026-02-03 05:48:54] -rw-------. 1 boinc boinc     21531 Feb  3 05:46 log.48442098._000004.job.log.tgz.1
[2026-02-03 05:48:54] -rw-------. 1 boinc boinc      7029 Feb  3 05:48 heartbeat.json
[2026-02-03 05:48:54] -rw-------. 1 boinc boinc        95 Feb  3 05:48 pilot_heartbeat.json
[2026-02-03 05:48:54] -rw-r--r--. 1 boinc boinc        22 Feb  3 05:48 wrapper_checkpoint.txt
[2026-02-03 05:48:54] -rw-------. 1 boinc boinc      4819 Feb  3 05:48 pilotlog.txt
[2026-02-03 05:48:54] -rw-------. 1 boinc boinc     86121 Feb  3 05:48 log.48442098._000004.job.log.1
[2026-02-03 05:48:54] -rw-------. 1 boinc boinc       188 Feb  3 05:48 output.list
[2026-02-03 05:48:54] -rw-r--r--. 1 boinc boinc       620 Feb  3 05:48 runtime_log
[2026-02-03 05:48:54] -rw-------. 1 boinc boinc    122880 Feb  3 05:48 result.tar.gz
[2026-02-03 05:48:54] -rw-r--r--. 1 boinc boinc      8635 Feb  3 05:48 runtime_log.err
[2026-02-03 05:48:54] -rw-------. 1 boinc boinc       643 Feb  3 05:48 KaDODmJwR78nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm6jUKDmsDMx9m.diag
[2026-02-03 05:48:54] -rw-r--r--. 1 boinc boinc      8192 Feb  3 05:48 boinc_mmap_file
[2026-02-03 05:48:54] -rw-r--r--. 1 boinc boinc     21902 Feb  3 05:48 stderr.txt
[2026-02-03 05:48:54] No HITS result produced
[2026-02-03 05:48:54]  *** Contents of shared directory: ***
[2026-02-03 05:48:54] total 488668
[2026-02-03 05:48:54] -rw-r--r--. 2 boinc boinc 499655199 Feb  3 05:44 ATLAS.root_0
[2026-02-03 05:48:54] -rw-r--r--. 2 boinc boinc    597747 Feb  3 05:44 input.tar.gz
[2026-02-03 05:48:54] -rw-r--r--. 2 boinc boinc     15845 Feb  3 05:44 start_atlas.sh
[2026-02-03 05:48:54] -rw-------. 1 boinc boinc    122880 Feb  3 05:48 result.tar.gz
05:48:56 (3548400): run_atlas exited; CPU time 20.571594
05:48:56 (3548400): called boinc_finish(0)

</stderr_txt>
]]>

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