Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:52:54 (1278825): wrapper (7.7.26015): starting
04:52:54 (1278825): wrapper: running run_atlas (--nthreads 8)
[2026-02-03 04:52:54] Arguments: --nthreads 8
[2026-02-03 04:52:54] Threads: 8
[2026-02-03 04:52:54] Checking for CVMFS
[2026-02-03 04:52:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-03 04:52:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-03 04:52:54] Running cvmfs_config stat atlas.cern.ch
[2026-02-03 04:52:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-03 04:52:54] 2.11.3.0 476926 127771 194268 155830 0 262 32575928 45568000 14753 130560 0 718483479 99.798 437041605 18103 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-02-03 04:52:54] CVMFS is ok
[2026-02-03 04:52:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-03 04:52:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-03 04:52:54] Further information can be found at the LHC@home message board.
[2026-02-03 04:52:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 04:52:54] Checking for apptainer binary...
[2026-02-03 04:52:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-03 04:52:54] Running /usr/bin/apptainer --version
[2026-02-03 04:52:54] apptainer version 1.4.1-1.el9
[2026-02-03 04:52:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 04:52:56] wns0002.triumf.lcg
[2026-02-03 04:52:56] apptainer works
[2026-02-03 04:52:56] Set ATHENA_PROC_NUMBER=8
[2026-02-03 04:52:56] Set ATHENA_CORE_NUMBER=8
[2026-02-03 04:52:56] Starting ATLAS job with PandaID=6993749879
[2026-02-03 04:52:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-03 05:02:02]  *** The last 200 lines of the pilot log: ***
[2026-02-03 05:02:02] 2026-02-03 13:00:55,451 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-03 05:02:02] 2026-02-03 13:00:55,451 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-03 05:02:02] 2026-02-03 13:00:55,451 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-03 05:02:02] 2026-02-03 13:00:55,452 | WARNING  | wrong length of table data, x=[1770123408.0, 1770123469.0], y=[3272.0, 404180.0] (must be same and length>=4)
[2026-02-03 05:02:02] 2026-02-03 13:00:55,452 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-02-03 05:02:02] 2026-02-03 13:00:55,452 | INFO     | ..............................
[2026-02-03 05:02:02] 2026-02-03 13:00:55,452 | INFO     | . Timing measurements:
[2026-02-03 05:02:02] 2026-02-03 13:00:55,452 | INFO     | . get job = 0 s
[2026-02-03 05:02:02] 2026-02-03 13:00:55,452 | INFO     | . initial setup = 52 s
[2026-02-03 05:02:02] 2026-02-03 13:00:55,452 | INFO     | . payload setup = 56 s
[2026-02-03 05:02:02] 2026-02-03 13:00:55,452 | INFO     | . stage-in = 1 s
[2026-02-03 05:02:02] 2026-02-03 13:00:55,452 | INFO     | . payload execution = 162 s
[2026-02-03 05:02:02] 2026-02-03 13:00:55,452 | INFO     | . stage-out = 1 s
[2026-02-03 05:02:02] 2026-02-03 13:00:55,452 | INFO     | . log creation = 0 s
[2026-02-03 05:02:02] 2026-02-03 13:00:55,452 | INFO     | ..............................
[2026-02-03 05:02:02] 2026-02-03 13:00:55,453 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-03 05:02:02] 2026-02-03 13:00:55,453 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6993749879/pilotlog.txt
[2026-02-03 05:02:02] 2026-02-03 13:00:55,702 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-03 05:02:02] - Log from pilotlog.txt -
[2026-02-03 05:02:02] 2026-02-03 13:00:55,427 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6993749879/memory_monitor_summary.json (trf name=prmon)
[2026-02-03 05:02:02] 2026-02-03 13:00:55,450 | INFO     | extracted standard info from prmon json
[2026-02-03 05:02:02] 2026-02-03 13:00:55,451 | INFO     | extracted standard memory fields from prmon json
[2026-02-03 05:02:02] 2026-02-03 13:00:55,451 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-03 05:02:02] 2026-02-03 13:00:55,451 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-03 05:02:02] 2026-02-03 13:00:55,451 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-03 05:02:02] 2026-02-03 13:00:55,452 | WARNING  | wrong length of table data, x=[1770123408.0, 1770123469.0], y=[3272.0, 404180.0] (must be same and length>=4)
[2026-02-03 05:02:02] 2026-02-03 13:00:55,452 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-02-03 05:02:02] 2026-02-03 13:00:55,452 | INFO     | ..............................
[2026-02-03 05:02:02] 2026-02-03 13:00:55,452 | INFO     | . Timing measurements:
[2026-02-03 05:02:02] 2026-02-03 13:00:55,452 | INFO     | . get job = 0 s
[2026-02-03 05:02:02] 2026-02-03 13:00:55,452 | INFO     | . initial setup = 52 s
[2026-02-03 05:02:02] 2026-02-03 13:00:55,452 | INFO     | . payload setup = 56 s
[2026-02-03 05:02:02] 2026-02-03 13:00:55,452 | INFO     | . stage-in = 1 s
[2026-02-03 05:02:02] 2026-02-03 13:00:55,452 | INFO     | . payload execution = 162 s
[2026-02-03 05:02:02] 2026-02-03 13:00:55,452 | INFO     | . stage-out = 1 s
[2026-02-03 05:02:02] 2026-02-03 13:00:55,452 | INFO     | . log creation = 0 s
[2026-02-03 05:02:02] 2026-02-03 13:00:55,452 | INFO     | ..............................
[2026-02-03 05:02:02] 2026-02-03 13:00:55,453 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-03 05:02:02] 2026-02-03 13:00:55,453 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6993749879/pilotlog.txt
[2026-02-03 05:02:02] 2026-02-03 13:00:55,702 | WARNING  | 
[2026-02-03 05:02:02] [begin log extracts]
[2026-02-03 05:02:02] - Log from pilotlog.txt -
[2026-02-03 05:02:02] 2026-02-03 13:00:55,427 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6993749879/memory_monitor_summary.json (trf name=prmon)
[2026-02-03 05:02:02] 2026-02-03 13:00:55,450 | INFO     | extracted standard info from prmon json
[2026-02-03 05:02:02] 2026-02-03 13:00:55,451 | INFO     | extracted standard memory fields from prmon json
[2026-02-03 05:02:02] 2026-02-03 13:00:55,451 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-03 05:02:02] 2026-02-03 13:00:55,451 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-03 05:02:02] 2026-02-03 13:00:55,451 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-03 05:02:02] 2026-02-03 13:00:55,452 | WARNING  | wrong length of table data, x=[1770123408.0, 1770123469.0], y=[3272.0, 404180.0] (must be same and length>=4)
[2026-02-03 05:02:02] 2026-02-03 13:00:55,452 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2026-02-03 05:02:02] 2026-02-03 13:00:55,452 | INFO     | ..............................
[2026-02-03 05:02:02] 2026-02-03 13:00:55,452 | INFO     | . Timing measurements:
[2026-02-03 05:02:02] 2026-02-03 13:00:55,452 | INFO     | . get job = 0 s
[2026-02-03 05:02:02] 2026-02-03 13:00:55,452 | INFO     | . initial setup = 52 s
[2026-02-03 05:02:02] 2026-02-03 13:00:55,452 | INFO     | . payload setup = 56 s
[2026-02-03 05:02:02] 2026-02-03 13:00:55,452 | INFO     | . stage-in = 1 s
[2026-02-03 05:02:02] 2026-02-03 13:00:55,452 | INFO     | . payload execution = 162 s
[2026-02-03 05:02:02] 2026-02-03 13:00:55,452 | INFO     | . stage-out = 1 s
[2026-02-03 05:02:02] 2026-02-03 13:00:55,452 | INFO     | . log creation = 0 s
[2026-02-03 05:02:02] 2026-02-03 13:00:55,452 | INFO     | ..............................
[2026-02-03 05:02:02] 2026-02-03 13:00:55,453 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-03 05:02:02] 2026-02-03 13:00:55,453 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6993749879/pilotlog.txt
[2026-02-03 05:02:02] [end log extracts]
[2026-02-03 05:02:02] 2026-02-03 13:00:55,702 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-03 05:02:02] 2026-02-03 13:00:55,703 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-03 05:02:02] 2026-02-03 13:00:55,855 | INFO     | 
[2026-02-03 05:02:02] 2026-02-03 13:00:55,856 | INFO     | job summary report
[2026-02-03 05:02:02] 2026-02-03 13:00:55,856 | INFO     | --------------------------------------------------
[2026-02-03 05:02:02] 2026-02-03 13:00:55,856 | INFO     | PanDA job id: 6993749879
[2026-02-03 05:02:02] 2026-02-03 13:00:55,856 | INFO     | task id: 48318034
[2026-02-03 05:02:02] 2026-02-03 13:00:55,856 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-03 04:58:38,931 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-03 05:02:02] 2026-02-03 13:00:55,856 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-03 05:02:02] 2026-02-03 13:00:55,856 | INFO     | pilot state: failed 
[2026-02-03 05:02:02] 2026-02-03 13:00:55,856 | INFO     | transexitcode: 65
[2026-02-03 05:02:02] 2026-02-03 13:00:55,856 | INFO     | exeerrorcode: 65
[2026-02-03 05:02:02] 2026-02-03 13:00:55,856 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-03 05:02:02] 2026-02-03 13:00:55,856 | INFO     | exitcode: 65
[2026-02-03 05:02:02] 2026-02-03 13:00:55,856 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-03 05:02:02] 2026-02-03 13:00:55,857 | INFO     | cpuconsumptiontime: 16 s
[2026-02-03 05:02:02] 2026-02-03 13:00:55,857 | INFO     | nevents: 0
[2026-02-03 05:02:02] 2026-02-03 13:00:55,857 | INFO     | neventsw: 0
[2026-02-03 05:02:02] 2026-02-03 13:00:55,857 | INFO     | pid: 1288145
[2026-02-03 05:02:02] 2026-02-03 13:00:55,857 | INFO     | pgrp: 1288145
[2026-02-03 05:02:02] 2026-02-03 13:00:55,857 | INFO     | corecount: 8
[2026-02-03 05:02:02] 2026-02-03 13:00:55,857 | INFO     | event service: False
[2026-02-03 05:02:02] 2026-02-03 13:00:55,857 | INFO     | sizes: {0: 2277742, 1: 2277826, 2: 2277854, 3: 2277854, 4: 2278287, 15: 2278315, 223: 2301745, 225: 2306037, 228: 2306065, 346: 2306231}
[2026-02-03 05:02:02] 2026-02-03 13:00:55,857 | INFO     | --------------------------------------------------
[2026-02-03 05:02:02] 2026-02-03 13:00:55,857 | INFO     | 
[2026-02-03 05:02:02] 2026-02-03 13:00:55,857 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-03 05:02:02] 2026-02-03 13:00:56,046 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-03 05:02:02] 2026-02-03 13:00:56,046 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-03 05:02:02] 2026-02-03 13:00:56,046 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-03 05:02:02] 2026-02-03 13:00:56,046 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-03 05:02:02] 2026-02-03 13:00:56,046 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-03 05:02:02] 2026-02-03 13:00:56,047 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-03 05:02:02] 2026-02-03 13:00:56,047 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-03 05:02:02] 2026-02-03 13:00:56,047 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-03 05:02:02] 2026-02-03 13:00:56,047 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-03 05:02:02] 2026-02-03 13:00:56,047 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-03 05:02:02] 2026-02-03 13:00:56,047 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-03 05:02:02] 2026-02-03 13:00:56,047 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-03 05:02:02] 2026-02-03 13:00:56,047 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-03 05:02:02] 2026-02-03 13:00:56,047 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-03 05:02:02] 2026-02-03 13:00:56,047 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-03 05:02:02] 2026-02-03 13:00:56,047 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-03 05:02:02] 2026-02-03 13:00:56,047 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-03 05:02:02] 2026-02-03 13:00:56,047 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-03 05:02:02] 2026-02-03 13:00:56,048 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-03 05:02:02] 2026-02-03 13:00:56,048 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-03 05:02:02] 2026-02-03 13:00:56,048 | INFO     | job 6993749879 has completed (purged errors)
[2026-02-03 05:02:02] 2026-02-03 13:00:56,048 | INFO     | overall cleanup function is called
[2026-02-03 05:02:02] 2026-02-03 13:00:57,055 | INFO     | --- collectZombieJob: --- 10, [1288145]
[2026-02-03 05:02:02] 2026-02-03 13:00:57,055 | INFO     | zombie collector waiting for pid 1288145
[2026-02-03 05:02:02] 2026-02-03 13:00:57,055 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-03 05:02:02] 2026-02-03 13:00:57,055 | INFO     | collected zombie processes
[2026-02-03 05:02:02] 2026-02-03 13:00:57,055 | INFO     | will attempt to kill all subprocesses of pid=1288145
[2026-02-03 05:02:02] 2026-02-03 13:00:57,670 | INFO     | process IDs to be killed: [1288145] (in reverse order)
[2026-02-03 05:02:02] 2026-02-03 13:00:57,738 | WARNING  | found no corresponding commands to process id(s)
[2026-02-03 05:02:02] 2026-02-03 13:00:57,738 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-03 05:02:02] 2026-02-03 13:00:57,755 | INFO     | did not find any defunct processes belonging to 1288145
[2026-02-03 05:02:02] 2026-02-03 13:00:57,773 | INFO     | did not find any defunct processes belonging to 1288145
[2026-02-03 05:02:02] 2026-02-03 13:00:57,773 | INFO     | ready for new job
[2026-02-03 05:02:02] 2026-02-03 13:00:57,773 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-03 05:02:02] 2026-02-03 13:00:57,781 | INFO     | **************************************
[2026-02-03 05:02:02] 2026-02-03 13:00:57,781 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-03 05:02:02] 2026-02-03 13:00:57,781 | INFO     | **************************************
[2026-02-03 05:02:02] 2026-02-03 13:00:57,781 | INFO     | 
[2026-02-03 05:02:02] 2026-02-03 13:00:57,783 | INFO     | architecture information:
[2026-02-03 05:02:02] 2026-02-03 13:00:57,783 | INFO     | executing command: cat /etc/os-release
[2026-02-03 05:02:02] 2026-02-03 13:00:57,796 | INFO     | cat /etc/os-release:
[2026-02-03 05:02:02] NAME="CentOS Linux"
[2026-02-03 05:02:02] VERSION="7 (Core)"
[2026-02-03 05:02:02] ID="centos"
[2026-02-03 05:02:02] ID_LIKE="rhel fedora"
[2026-02-03 05:02:02] VERSION_ID="7"
[2026-02-03 05:02:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-03 05:02:02] ANSI_COLOR="0;31"
[2026-02-03 05:02:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-03 05:02:02] HOME_URL="https://www.centos.org/"
[2026-02-03 05:02:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-03 05:02:02] 
[2026-02-03 05:02:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-03 05:02:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-03 05:02:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-03 05:02:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-03 05:02:02] 
[2026-02-03 05:02:02] 2026-02-03 13:00:57,796 | INFO     | **************************************
[2026-02-03 05:02:02] 2026-02-03 13:00:58,302 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-03 05:02:02] 2026-02-03 13:00:58,365 | INFO     | sufficient remaining disk space (1435364229120 B)
[2026-02-03 05:02:02] 2026-02-03 13:00:58,365 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-03 05:02:02] 2026-02-03 13:00:58,365 | INFO     | current server update state: UPDATING_FINAL
[2026-02-03 05:02:02] 2026-02-03 13:00:58,366 | INFO     | update_server=False
[2026-02-03 05:02:02] 2026-02-03 13:00:58,366 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-03 05:02:02] 2026-02-03 13:00:58,611 | INFO     | all job control threads have been joined
[2026-02-03 05:02:02] 2026-02-03 13:00:58,868 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-03 05:02:02] 2026-02-03 13:00:58,868 | INFO     | aborting loop
[2026-02-03 05:02:02] 2026-02-03 13:00:58,920 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-03 05:02:02] 2026-02-03 13:00:59,032 | INFO     | all payload control threads have been joined
[2026-02-03 05:02:02] 2026-02-03 13:00:59,305 | INFO     | all data control threads have been joined
[2026-02-03 05:02:02] 2026-02-03 13:00:59,372 | INFO     | [job] retrieve thread has finished
[2026-02-03 05:02:02] 2026-02-03 13:00:59,438 | INFO     | [payload] execute_payloads thread has finished
[2026-02-03 05:02:02] 2026-02-03 13:00:59,617 | INFO     | [job] control thread has finished
[2026-02-03 05:02:02] 2026-02-03 13:00:59,649 | INFO     | [payload] validate_post thread has finished
[2026-02-03 05:02:02] 2026-02-03 13:00:59,649 | INFO     | [payload] validate_pre thread has finished
[2026-02-03 05:02:02] 2026-02-03 13:00:59,874 | INFO     | [job] job monitor thread has finished
[2026-02-03 05:02:02] 2026-02-03 13:01:00,015 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-03 05:02:02] 2026-02-03 13:01:00,047 | INFO     | [payload] control thread has finished
[2026-02-03 05:02:02] 2026-02-03 13:01:00,068 | INFO     | [job] create_data_payload thread has finished
[2026-02-03 05:02:02] 2026-02-03 13:01:00,147 | INFO     | [job] validate thread has finished
[2026-02-03 05:02:02] 2026-02-03 13:01:00,311 | INFO     | [data] control thread has finished
[2026-02-03 05:02:02] 2026-02-03 13:01:00,458 | INFO     | [payload] failed_post thread has finished
[2026-02-03 05:02:02] 2026-02-03 13:01:00,716 | INFO     | [data] copytool_in thread has finished
[2026-02-03 05:02:02] 2026-02-03 13:01:00,870 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-03 05:02:02] 2026-02-03 13:01:00,929 | INFO     | [data] copytool_out thread has finished
[2026-02-03 05:02:02] 2026-02-03 13:01:01,316 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-03 05:02:02] 2026-02-03 13:01:01,876 | INFO     | [job] queue monitor thread has finished
[2026-02-03 05:02:02] 2026-02-03 13:01:05,325 | INFO     | [data] queue_monitor thread has finished
[2026-02-03 05:02:02] 2026-02-03 13:01:28,529 | INFO     | PID=1282839 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-03 05:02:02] 2026-02-03 13:01:28,529 | INFO     | .. there are 33 such processes running
[2026-02-03 05:02:02] 2026-02-03 13:01:28,529 | INFO     | found 0 job(s) in 20 queues
[2026-02-03 05:02:02] 2026-02-03 13:01:28,530 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-03 05:02:02] 2026-02-03 13:01:28,530 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-03 05:02:02] 2026-02-03 13:01:54,487 | INFO     | [monitor] cgroup control has ended
[2026-02-03 05:02:02] 2026-02-03 13:01:55,895 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140500326954816)>', '<ExcThread(monitor, started 140499604182784)>']
[2026-02-03 05:02:02] 2026-02-03 13:01:56,774 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-03 05:02:02] 2026-02-03 13:01:56,774 | INFO     | [monitor] control thread has ended
[2026-02-03 05:02:02] 2026-02-03 13:02:00,942 | INFO     | all workflow threads have been joined
[2026-02-03 05:02:02] 2026-02-03 13:02:00,942 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-03 05:02:02] 2026-02-03 13:02:00,942 | INFO     | traces error code: 0
[2026-02-03 05:02:02] 2026-02-03 13:02:00,942 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-03 05:02:02] 2026-02-03 13:02:01,364 [wrapper] ==== pilot stdout END ====
[2026-02-03 05:02:02] 2026-02-03 13:02:01,383 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-03 05:02:02] 2026-02-03 13:02:01,419 [wrapper] pilotpid: 1282839
[2026-02-03 05:02:02] 2026-02-03 13:02:01,433 [wrapper] Pilot exit status: 0
[2026-02-03 05:02:02] 2026-02-03 13:02:01,567 [wrapper] pandaids: 6993749879
[2026-02-03 05:02:02] 2026-02-03 13:02:01,907 [wrapper] cleanup supervisor_pilot 1282849 1282840
[2026-02-03 05:02:02] 2026-02-03 13:02:01,957 [wrapper] Test setup, not cleaning
[2026-02-03 05:02:02] 2026-02-03 13:02:01,989 [wrapper] apfmon messages muted
[2026-02-03 05:02:02] 2026-02-03 13:02:02,026 [wrapper] ==== wrapper stdout END ====
[2026-02-03 05:02:02] 2026-02-03 13:02:02,045 [wrapper] ==== wrapper stderr END ====
[2026-02-03 05:02:02]  *** Error codes and diagnostics ***
[2026-02-03 05:02:02]     "exeErrorCode": 65,
[2026-02-03 05:02:02]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-03 05:02:02]     "pilotErrorCode": 1305,
[2026-02-03 05:02:02]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-03 05:02:02]  *** Listing of results directory ***
[2026-02-03 05:02:02] total 488164
[2026-02-03 05:02:02] -rw-r--r--. 1 boinc boinc      5111 Feb  3 01:31 queuedata.json
[2026-02-03 05:02:02] -rw-r--r--. 1 boinc boinc    584422 Feb  3 01:31 pilot3.tar.gz
[2026-02-03 05:02:02] -rwx------. 1 boinc boinc     36322 Feb  3 01:31 runpilot2-wrapper.sh
[2026-02-03 05:02:02] -rw-r--r--. 1 boinc boinc       100 Feb  3 04:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-03 05:02:02] -rwxr-xr-x. 1 boinc boinc      7986 Feb  3 04:52 run_atlas
[2026-02-03 05:02:02] -rw-r--r--. 1 boinc boinc       105 Feb  3 04:52 job.xml
[2026-02-03 05:02:02] -rw-r--r--. 1 boinc boinc      6443 Feb  3 04:52 init_data.xml
[2026-02-03 05:02:02] -rw-r--r--. 2 boinc boinc 495696407 Feb  3 04:52 EVNT.48318032._000166.pool.root.1
[2026-02-03 05:02:02] -rw-r--r--. 2 boinc boinc     15845 Feb  3 04:52 start_atlas.sh
[2026-02-03 05:02:02] drwxrwx--x. 2 boinc boinc      4096 Feb  3 04:52 shared
[2026-02-03 05:02:02] -rw-r--r--. 2 boinc boinc    597764 Feb  3 04:52 input.tar.gz
[2026-02-03 05:02:02] -rw-r--r--. 1 boinc boinc         0 Feb  3 04:52 boinc_lockfile
[2026-02-03 05:02:02] -rw-r--r--. 1 boinc boinc      2535 Feb  3 04:52 pandaJob.out
[2026-02-03 05:02:02] -rw-------. 1 boinc boinc   1009258 Feb  3 04:54 agis_schedconf.cvmfs.json
[2026-02-03 05:02:02] -rw-------. 1 boinc boinc   1511668 Feb  3 04:54 agis_ddmendpoints.agis.ALL.json
[2026-02-03 05:02:02] -rw-------. 1 boinc boinc       431 Feb  3 04:54 workernode_map.json
[2026-02-03 05:02:02] drwx------. 5 boinc boinc      4096 Feb  3 04:54 pilot3
[2026-02-03 05:02:02] -rw-r--r--. 1 boinc boinc       525 Feb  3 04:58 boinc_task_state.xml
[2026-02-03 05:02:02] -rw-------. 1 boinc boinc       984 Feb  3 04:58 memory_monitor_summary.json
[2026-02-03 05:02:02] -rw-------. 1 boinc boinc     23361 Feb  3 04:58 log.48318034._007850.job.log.tgz.1
[2026-02-03 05:02:02] -rw-------. 1 boinc boinc      7046 Feb  3 05:00 heartbeat.json
[2026-02-03 05:02:02] -rw-------. 1 boinc boinc        95 Feb  3 05:01 pilot_heartbeat.json
[2026-02-03 05:02:02] -rw-r--r--. 1 boinc boinc      8192 Feb  3 05:01 boinc_mmap_file
[2026-02-03 05:02:02] -rw-r--r--. 1 boinc boinc        23 Feb  3 05:01 wrapper_checkpoint.txt
[2026-02-03 05:02:02] -rw-------. 1 boinc boinc      4819 Feb  3 05:02 pilotlog.txt
[2026-02-03 05:02:02] -rw-------. 1 boinc boinc    102324 Feb  3 05:02 log.48318034._007850.job.log.1
[2026-02-03 05:02:02] -rw-------. 1 boinc boinc       188 Feb  3 05:02 output.list
[2026-02-03 05:02:02] -rw-r--r--. 1 boinc boinc       620 Feb  3 05:02 runtime_log
[2026-02-03 05:02:02] -rw-------. 1 boinc boinc    143360 Feb  3 05:02 result.tar.gz
[2026-02-03 05:02:02] -rw-------. 1 boinc boinc       644 Feb  3 05:02 ts3LDm5vR78n9Rq4apOajLDm4fhM0noT9bVooX4SDmqGUKDmRalAfn.diag
[2026-02-03 05:02:02] -rw-r--r--. 1 boinc boinc      8633 Feb  3 05:02 runtime_log.err
[2026-02-03 05:02:02] -rw-r--r--. 1 boinc boinc     21887 Feb  3 05:02 stderr.txt
[2026-02-03 05:02:02] No HITS result produced
[2026-02-03 05:02:02]  *** Contents of shared directory: ***
[2026-02-03 05:02:02] total 484824
[2026-02-03 05:02:02] -rw-r--r--. 2 boinc boinc 495696407 Feb  3 04:52 ATLAS.root_0
[2026-02-03 05:02:02] -rw-r--r--. 2 boinc boinc     15845 Feb  3 04:52 start_atlas.sh
[2026-02-03 05:02:02] -rw-r--r--. 2 boinc boinc    597764 Feb  3 04:52 input.tar.gz
[2026-02-03 05:02:02] -rw-------. 1 boinc boinc    143360 Feb  3 05:02 result.tar.gz
05:02:04 (1278825): run_atlas exited; CPU time 29.837949
05:02:04 (1278825): called boinc_finish(0)

</stderr_txt>
]]>

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