Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:03:18 (27630): wrapper (7.7.26015): starting
20:03:18 (27630): wrapper: running run_atlas (--nthreads 8)
[2026-02-03 20:03:18] Arguments: --nthreads 8
[2026-02-03 20:03:18] Threads: 8
[2026-02-03 20:03:18] Checking for CVMFS
[2026-02-03 20:03:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-03 20:03:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-03 20:03:21] Running cvmfs_config stat atlas.cern.ch
[2026-02-03 20:03:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-03 20:03:22] 2.11.2.0 6904 71811 138360 155840 3 293 20125780 25165825 3663 130560 0 27334155 99.841 17402772 3060 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-02-03 20:03:22] CVMFS is ok
[2026-02-03 20:03:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 20:03:22] Checking for apptainer binary...
[2026-02-03 20:03:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-03 20:03:22] Running /usr/bin/apptainer --version
[2026-02-03 20:03:22] apptainer version 1.3.2-1.el7
[2026-02-03 20:03:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 20:03:35] cg-vwn474.simple-grid.lan
[2026-02-03 20:03:35] apptainer works
[2026-02-03 20:03:35] Set ATHENA_PROC_NUMBER=8
[2026-02-03 20:03:35] Set ATHENA_CORE_NUMBER=8
[2026-02-03 20:03:35] Starting ATLAS job with PandaID=6993747116
[2026-02-03 20:03:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-03 23:59:27]  *** The last 200 lines of the pilot log: ***
[2026-02-03 23:59:27] 2026-02-03 22:58:55,666 | INFO     | sum of square deviations: 3081657780.0
[2026-02-03 23:59:27] 2026-02-03 22:58:55,667 | INFO     | sum of deviations: 4971691174.000001
[2026-02-03 23:59:27] 2026-02-03 22:58:55,667 | INFO     | mean x: 1770152962.0
[2026-02-03 23:59:27] 2026-02-03 22:58:55,667 | INFO     | mean y: 2499156.241860465
[2026-02-03 23:59:27] 2026-02-03 22:58:55,668 | INFO     | intersect: -2853318876.1567144
[2026-02-03 23:59:27] 2026-02-03 22:58:55,668 | INFO     | chi2: 0.0020732605645256337
[2026-02-03 23:59:27] 2026-02-03 22:58:55,668 | INFO     | current chi2=0.0020732605645256337 (change=56.1110481657662 %)
[2026-02-03 23:59:27] 2026-02-03 22:58:55,669 | INFO     | sum of square deviations: 2871616632.5
[2026-02-03 23:59:27] 2026-02-03 22:58:55,670 | INFO     | sum of deviations: 3394616236.500001
[2026-02-03 23:59:27] 2026-02-03 22:58:55,670 | INFO     | mean x: 1770153114.5
[2026-02-03 23:59:27] 2026-02-03 22:58:55,670 | INFO     | mean y: 2500299.5857142857
[2026-02-03 23:59:27] 2026-02-03 22:58:55,671 | INFO     | intersect: -2090045911.3412573
[2026-02-03 23:59:27] 2026-02-03 22:58:55,671 | INFO     | chi2: 0.0007816186906693793
[2026-02-03 23:59:27] 2026-02-03 22:58:55,671 | INFO     | current chi2=0.0007816186906693793 (change=62.30002614995885 %)
[2026-02-03 23:59:27] 2026-02-03 22:58:55,671 | INFO     | sum of square deviations: 2671343110.0
[2026-02-03 23:59:27] 2026-02-03 22:58:55,673 | INFO     | sum of deviations: 2584238830.9999995
[2026-02-03 23:59:27] 2026-02-03 22:58:55,673 | INFO     | mean x: 1770153267.0
[2026-02-03 23:59:27] 2026-02-03 22:58:55,674 | INFO     | mean y: 2500916.419512195
[2026-02-03 23:59:27] 2026-02-03 22:58:55,674 | INFO     | intersect: -1709933099.3677409
[2026-02-03 23:59:27] 2026-02-03 22:58:55,674 | INFO     | chi2: 0.000496907707548507
[2026-02-03 23:59:27] 2026-02-03 22:58:55,674 | INFO     | current chi2=0.000496907707548507 (change=36.42581562079145 %)
[2026-02-03 23:59:27] 2026-02-03 22:58:55,674 | INFO     | sum of square deviations: 2480604650.0
[2026-02-03 23:59:27] 2026-02-03 22:58:55,676 | INFO     | sum of deviations: 1861738025.5
[2026-02-03 23:59:27] 2026-02-03 22:58:55,676 | INFO     | mean x: 1770153419.5
[2026-02-03 23:59:27] 2026-02-03 22:58:55,676 | INFO     | mean y: 2501493.775
[2026-02-03 23:59:27] 2026-02-03 22:58:55,676 | INFO     | intersect: -1326030214.0293868
[2026-02-03 23:59:27] 2026-02-03 22:58:55,677 | INFO     | chi2: 0.00023352860769450915
[2026-02-03 23:59:27] 2026-02-03 22:58:55,677 | INFO     | current chi2=0.00023352860769450915 (change=53.003625392203716 %)
[2026-02-03 23:59:27] 2026-02-03 22:58:55,677 | INFO     | sum of square deviations: 2299168690.0
[2026-02-03 23:59:27] 2026-02-03 22:58:55,679 | INFO     | sum of deviations: 1384673160.0000002
[2026-02-03 23:59:27] 2026-02-03 22:58:55,679 | INFO     | mean x: 1770153572.0
[2026-02-03 23:59:27] 2026-02-03 22:58:55,679 | INFO     | mean y: 2501894.8102564104
[2026-02-03 23:59:27] 2026-02-03 22:58:55,679 | INFO     | intersect: -1063572182.6975267
[2026-02-03 23:59:27] 2026-02-03 22:58:55,679 | INFO     | chi2: 0.0001227170475519883
[2026-02-03 23:59:27] 2026-02-03 22:58:55,679 | INFO     | current chi2=0.0001227170475519883 (change=47.45095739511246 %)
[2026-02-03 23:59:27] 2026-02-03 22:58:55,680 | INFO     | sum of square deviations: 2126802667.5
[2026-02-03 23:59:27] 2026-02-03 22:58:55,681 | INFO     | sum of deviations: 1235073008.4999998
[2026-02-03 23:59:27] 2026-02-03 22:58:55,681 | INFO     | mean x: 1770153724.5
[2026-02-03 23:59:27] 2026-02-03 22:58:55,681 | INFO     | mean y: 2502026.110526316
[2026-02-03 23:59:27] 2026-02-03 22:58:55,681 | INFO     | intersect: -1025458451.5747851
[2026-02-03 23:59:27] 2026-02-03 22:58:55,682 | INFO     | chi2: 0.00010855636318555407
[2026-02-03 23:59:27] 2026-02-03 22:58:55,682 | INFO     | current chi2=0.00010855636318555407 (change=11.539296820545777 %)
[2026-02-03 23:59:27] 2026-02-03 22:58:55,682 | INFO     | left removable region: 80
[2026-02-03 23:59:27] 2026-02-03 22:58:55,682 | INFO     | sum of square deviations: 925859220.0
[2026-02-03 23:59:27] 2026-02-03 22:58:55,683 | INFO     | sum of deviations: 446292775.0
[2026-02-03 23:59:27] 2026-02-03 22:58:55,683 | INFO     | mean x: 1770154761.5
[2026-02-03 23:59:27] 2026-02-03 22:58:55,683 | INFO     | mean y: 2502770.0555555555
[2026-02-03 23:59:27] 2026-02-03 22:58:55,683 | INFO     | intersect: -850766564.6596057
[2026-02-03 23:59:27] 2026-02-03 22:58:55,684 | INFO     | chi2: 9.268936668158854e-05
[2026-02-03 23:59:27] 2026-02-03 22:58:55,684 | INFO     | current memory leak: 0.48 B/s (using 144 data points, chi2=0.00)
[2026-02-03 23:59:27] 2026-02-03 22:58:55,684 | INFO     | could have reported an average CPU frequency of 2249 MHz (11 samples)
[2026-02-03 23:59:27] 2026-02-03 22:58:55,684 | INFO     | ..............................
[2026-02-03 23:59:27] 2026-02-03 22:58:55,685 | INFO     | . Timing measurements:
[2026-02-03 23:59:27] 2026-02-03 22:58:55,685 | INFO     | . get job = 0 s
[2026-02-03 23:59:27] 2026-02-03 22:58:55,685 | INFO     | . initial setup = 13 s
[2026-02-03 23:59:27] 2026-02-03 22:58:55,685 | INFO     | . payload setup = 14 s
[2026-02-03 23:59:27] 2026-02-03 22:58:55,685 | INFO     | . stage-in = 0 s
[2026-02-03 23:59:27] 2026-02-03 22:58:55,685 | INFO     | . payload execution = 14022 s
[2026-02-03 23:59:27] 2026-02-03 22:58:55,685 | INFO     | . stage-out = 1 s
[2026-02-03 23:59:27] 2026-02-03 22:58:55,685 | INFO     | . log creation = 0 s
[2026-02-03 23:59:27] 2026-02-03 22:58:55,685 | INFO     | ..............................
[2026-02-03 23:59:27] 2026-02-03 22:58:55,796 | INFO     | 
[2026-02-03 23:59:27] 2026-02-03 22:58:55,796 | INFO     | job summary report
[2026-02-03 23:59:27] 2026-02-03 22:58:55,796 | INFO     | --------------------------------------------------
[2026-02-03 23:59:27] 2026-02-03 22:58:55,796 | INFO     | PanDA job id: 6993747116
[2026-02-03 23:59:27] 2026-02-03 22:58:55,797 | INFO     | task id: 48318034
[2026-02-03 23:59:27] 2026-02-03 22:58:55,797 | INFO     | errors: (none)
[2026-02-03 23:59:27] 2026-02-03 22:58:55,797 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-03 23:59:27] 2026-02-03 22:58:55,797 | INFO     | pilot state: finished 
[2026-02-03 23:59:27] 2026-02-03 22:58:55,797 | INFO     | transexitcode: 0
[2026-02-03 23:59:27] 2026-02-03 22:58:55,797 | INFO     | exeerrorcode: 0
[2026-02-03 23:59:27] 2026-02-03 22:58:55,797 | INFO     | exeerrordiag: 
[2026-02-03 23:59:27] 2026-02-03 22:58:55,797 | INFO     | exitcode: 0
[2026-02-03 23:59:27] 2026-02-03 22:58:55,797 | INFO     | exitmsg: OK
[2026-02-03 23:59:27] 2026-02-03 22:58:55,797 | INFO     | cpuconsumptiontime: 55301 s
[2026-02-03 23:59:27] 2026-02-03 22:58:55,798 | INFO     | nevents: 400
[2026-02-03 23:59:27] 2026-02-03 22:58:55,798 | INFO     | neventsw: 0
[2026-02-03 23:59:27] 2026-02-03 22:58:55,798 | INFO     | pid: 3842
[2026-02-03 23:59:27] 2026-02-03 22:58:55,798 | INFO     | pgrp: 3842
[2026-02-03 23:59:27] 2026-02-03 22:58:55,798 | INFO     | corecount: 8
[2026-02-03 23:59:27] 2026-02-03 22:58:55,798 | INFO     | event service: False
[2026-02-03 23:59:27] 2026-02-03 22:58:55,798 | INFO     | sizes: {0: 2277801, 1: 2278262, 14041: 2308597, 14044: 2317595, 14046: 2317651, 14047: 2317845}
[2026-02-03 23:59:27] 2026-02-03 22:58:55,798 | INFO     | --------------------------------------------------
[2026-02-03 23:59:27] 2026-02-03 22:58:55,798 | INFO     | 
[2026-02-03 23:59:27] 2026-02-03 22:58:55,798 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2026-02-03 23:59:27] 2026-02-03 22:58:55,882 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-03 23:59:27] 2026-02-03 22:58:55,882 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-03 23:59:27] 2026-02-03 22:58:55,882 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-03 23:59:27] 2026-02-03 22:58:55,882 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-03 23:59:27] 2026-02-03 22:58:55,883 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-03 23:59:27] 2026-02-03 22:58:55,883 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-03 23:59:27] 2026-02-03 22:58:55,883 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-03 23:59:27] 2026-02-03 22:58:55,883 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-03 23:59:27] 2026-02-03 22:58:55,883 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-03 23:59:27] 2026-02-03 22:58:55,883 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-03 23:59:27] 2026-02-03 22:58:55,883 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-03 23:59:27] 2026-02-03 22:58:55,883 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-03 23:59:27] 2026-02-03 22:58:55,884 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-03 23:59:27] 2026-02-03 22:58:55,884 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-03 23:59:27] 2026-02-03 22:58:55,884 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-03 23:59:27] 2026-02-03 22:58:55,884 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-03 23:59:27] 2026-02-03 22:58:55,884 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-03 23:59:27] 2026-02-03 22:58:55,884 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-03 23:59:27] 2026-02-03 22:58:55,884 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-03 23:59:27] 2026-02-03 22:58:55,884 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-03 23:59:27] 2026-02-03 22:58:55,885 | INFO     | job 6993747116 has completed (purged errors)
[2026-02-03 23:59:27] 2026-02-03 22:58:55,885 | INFO     | overall cleanup function is called
[2026-02-03 23:59:27] 2026-02-03 22:58:56,893 | INFO     | --- collectZombieJob: --- 10, [3842]
[2026-02-03 23:59:27] 2026-02-03 22:58:56,893 | INFO     | zombie collector waiting for pid 3842
[2026-02-03 23:59:27] 2026-02-03 22:58:56,893 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-03 23:59:27] 2026-02-03 22:58:56,893 | INFO     | collected zombie processes
[2026-02-03 23:59:27] 2026-02-03 22:58:56,894 | INFO     | will attempt to kill all subprocesses of pid=3842
[2026-02-03 23:59:27] 2026-02-03 22:58:56,988 | INFO     | process IDs to be killed: [3842] (in reverse order)
[2026-02-03 23:59:27] 2026-02-03 22:58:57,062 | WARNING  | found no corresponding commands to process id(s)
[2026-02-03 23:59:27] 2026-02-03 22:58:57,063 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-03 23:59:27] 2026-02-03 22:58:57,066 | INFO     | did not find any defunct processes belonging to 3842
[2026-02-03 23:59:27] 2026-02-03 22:58:57,068 | INFO     | did not find any defunct processes belonging to 3842
[2026-02-03 23:59:27] 2026-02-03 22:58:57,069 | INFO     | ready for new job
[2026-02-03 23:59:27] 2026-02-03 22:58:57,069 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-03 23:59:27] 2026-02-03 22:58:57,071 | INFO     | **************************************
[2026-02-03 23:59:27] 2026-02-03 22:58:57,071 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-03 23:59:27] 2026-02-03 22:58:57,071 | INFO     | **************************************
[2026-02-03 23:59:27] 2026-02-03 22:58:57,071 | INFO     | 
[2026-02-03 23:59:27] 2026-02-03 22:58:57,072 | INFO     | pilot is running in a VM
[2026-02-03 23:59:27] 2026-02-03 22:58:57,072 | INFO     | architecture information:
[2026-02-03 23:59:27] 2026-02-03 22:58:57,080 | INFO     | executing command: cat /etc/os-release
[2026-02-03 23:59:27] 2026-02-03 22:58:57,110 | INFO     | cat /etc/os-release:
[2026-02-03 23:59:27] NAME="CentOS Linux"
[2026-02-03 23:59:27] VERSION="7 (Core)"
[2026-02-03 23:59:27] ID="centos"
[2026-02-03 23:59:27] ID_LIKE="rhel fedora"
[2026-02-03 23:59:27] VERSION_ID="7"
[2026-02-03 23:59:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-03 23:59:27] ANSI_COLOR="0;31"
[2026-02-03 23:59:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-03 23:59:27] HOME_URL="https://www.centos.org/"
[2026-02-03 23:59:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-03 23:59:27] 
[2026-02-03 23:59:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-03 23:59:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-03 23:59:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-03 23:59:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-03 23:59:27] 
[2026-02-03 23:59:27] 2026-02-03 22:58:57,110 | INFO     | **************************************
[2026-02-03 23:59:27] 2026-02-03 22:58:57,613 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2026-02-03 23:59:27] 2026-02-03 22:58:57,638 | INFO     | sufficient remaining disk space (494063845376 B)
[2026-02-03 23:59:27] 2026-02-03 22:58:57,638 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-03 23:59:27] 2026-02-03 22:58:57,638 | INFO     | current server update state: UPDATING_FINAL
[2026-02-03 23:59:27] 2026-02-03 22:58:57,638 | INFO     | update_server=False
[2026-02-03 23:59:27] 2026-02-03 22:58:57,638 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-03 23:59:27] 2026-02-03 22:58:57,639 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-03 23:59:27] 2026-02-03 22:58:57,647 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-03 23:59:27] 2026-02-03 22:58:57,647 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-03 23:59:27] 2026-02-03 22:58:57,648 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-03 23:59:27] 2026-02-03 22:58:57,648 | INFO     | will abort loop
[2026-02-03 23:59:27] 2026-02-03 22:58:58,165 | INFO     | all payload control threads have been joined
[2026-02-03 23:59:27] 2026-02-03 22:58:58,211 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-03 23:59:27] 2026-02-03 22:58:58,644 | INFO     | [job] retrieve thread has finished
[2026-02-03 23:59:27] 2026-02-03 22:58:58,645 | INFO     | [job] queue monitor thread has finished
[2026-02-03 23:59:27] 2026-02-03 22:58:58,653 | INFO     | [job] job monitor thread has finished
[2026-02-03 23:59:27] 2026-02-03 22:58:58,663 | INFO     | all data control threads have been joined
[2026-02-03 23:59:27] 2026-02-03 22:58:58,692 | INFO     | [payload] validate_post thread has finished
[2026-02-03 23:59:27] 2026-02-03 22:58:58,696 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-03 23:59:27] 2026-02-03 22:58:58,749 | INFO     | [payload] failed_post thread has finished
[2026-02-03 23:59:27] 2026-02-03 22:58:58,979 | INFO     | [job] create_data_payload thread has finished
[2026-02-03 23:59:27] 2026-02-03 22:58:59,069 | INFO     | all job control threads have been joined
[2026-02-03 23:59:27] 2026-02-03 22:58:59,171 | INFO     | [payload] control thread has finished
[2026-02-03 23:59:27] 2026-02-03 22:58:59,222 | INFO     | [payload] validate_pre thread has finished
[2026-02-03 23:59:27] 2026-02-03 22:58:59,335 | INFO     | [job] validate thread has finished
[2026-02-03 23:59:27] 2026-02-03 22:58:59,575 | INFO     | [payload] execute_payloads thread has finished
[2026-02-03 23:59:27] 2026-02-03 22:58:59,616 | INFO     | [data] copytool_in thread has finished
[2026-02-03 23:59:27] 2026-02-03 22:58:59,669 | INFO     | [data] control thread has finished
[2026-02-03 23:59:27] 2026-02-03 22:59:00,070 | INFO     | [job] control thread has finished
[2026-02-03 23:59:27] 2026-02-03 22:59:00,214 | INFO     | [data] copytool_out thread has finished
[2026-02-03 23:59:27] 2026-02-03 22:59:00,331 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-03 23:59:27] 2026-02-03 22:59:04,337 | INFO     | [data] queue_monitor thread has finished
[2026-02-03 23:59:27] 2026-02-03 22:59:11,816 | INFO     | [monitor] cgroup control has ended
[2026-02-03 23:59:27] 2026-02-03 22:59:13,758 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139722498152256)>', '<ExcThread(monitor, started 139721921521408)>']
[2026-02-03 23:59:27] 2026-02-03 22:59:18,784 | INFO     | all workflow threads have been joined
[2026-02-03 23:59:27] 2026-02-03 22:59:18,784 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-03 23:59:27] 2026-02-03 22:59:18,785 | INFO     | traces error code: 0
[2026-02-03 23:59:27] 2026-02-03 22:59:18,785 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-03 23:59:27] 2026-02-03 22:59:27,073 | INFO     | PID=31737 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-03 23:59:27] 2026-02-03 22:59:27,073 | INFO     | .. there are 7 such processes running
[2026-02-03 23:59:27] 2026-02-03 22:59:27,074 | INFO     | found 0 job(s) in 20 queues
[2026-02-03 23:59:27] 2026-02-03 22:59:27,074 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-03 23:59:27] 2026-02-03 22:59:27,074 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-03 23:59:27] 2026-02-03 22:59:27,074 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-03 23:59:27] 2026-02-03 22:59:27,074 | CRITICAL | thread 'MainThread' is not alive
[2026-02-03 23:59:27] 2026-02-03 22:59:27,075 | INFO     | [monitor] control thread has ended
[2026-02-03 23:59:27] 2026-02-03 22:59:27,224 [wrapper] ==== pilot stdout END ====
[2026-02-03 23:59:27] 2026-02-03 22:59:27,228 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-03 23:59:27] 2026-02-03 22:59:27,231 [wrapper] pilotpid: 31737
[2026-02-03 23:59:27] 2026-02-03 22:59:27,234 [wrapper] Pilot exit status: 0
[2026-02-03 23:59:27] 2026-02-03 22:59:27,289 [wrapper] pandaids: 6993747116
[2026-02-03 23:59:27] 2026-02-03 22:59:27,326 [wrapper] cleanup supervisor_pilot 25322 31738
[2026-02-03 23:59:27] 2026-02-03 22:59:27,330 [wrapper] Test setup, not cleaning
[2026-02-03 23:59:27] 2026-02-03 22:59:27,352 [wrapper] apfmon messages muted
[2026-02-03 23:59:27] 2026-02-03 22:59:27,364 [wrapper] ==== wrapper stdout END ====
[2026-02-03 23:59:27] 2026-02-03 22:59:27,379 [wrapper] ==== wrapper stderr END ====
[2026-02-03 23:59:27]  *** Error codes and diagnostics ***
[2026-02-03 23:59:27]     "exeErrorCode": 0,
[2026-02-03 23:59:27]     "exeErrorDiag": "",
[2026-02-03 23:59:27]     "pilotErrorCode": 0,
[2026-02-03 23:59:27]     "pilotErrorDiag": "",
[2026-02-03 23:59:27]  *** Listing of results directory ***
[2026-02-03 23:59:27] total 666976
[2026-02-03 23:59:27] -rw-r--r--. 1 boinc boinc    584422 Feb  3 05:59 pilot3.tar.gz
[2026-02-03 23:59:27] -rwx------. 1 boinc boinc     36322 Feb  3 06:01 runpilot2-wrapper.sh
[2026-02-03 23:59:27] -rw-r--r--. 1 boinc boinc      5111 Feb  3 06:02 queuedata.json
[2026-02-03 23:59:27] -rw-r--r--. 1 boinc boinc       100 Feb  3 20:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-03 23:59:27] -rwxr-xr-x. 1 boinc boinc      7986 Feb  3 20:03 run_atlas
[2026-02-03 23:59:27] -rw-r--r--. 1 boinc boinc       105 Feb  3 20:03 job.xml
[2026-02-03 23:59:27] -rw-r--r--. 1 boinc boinc      6392 Feb  3 20:03 init_data.xml
[2026-02-03 23:59:27] -rw-r--r--. 2 boinc boinc 493712179 Feb  3 20:03 EVNT.48318032._000152.pool.root.1
[2026-02-03 23:59:27] -rw-r--r--. 2 boinc boinc     15845 Feb  3 20:03 start_atlas.sh
[2026-02-03 23:59:27] drwxrwx--x. 2 boinc boinc        68 Feb  3 20:03 shared
[2026-02-03 23:59:27] -rw-r--r--. 2 boinc boinc    597767 Feb  3 20:03 input.tar.gz
[2026-02-03 23:59:27] -rw-r--r--. 1 boinc boinc         0 Feb  3 20:03 boinc_lockfile
[2026-02-03 23:59:27] -rw-r--r--. 1 boinc boinc      2535 Feb  3 20:03 pandaJob.out
[2026-02-03 23:59:27] -rw-------. 1 boinc boinc   1009252 Feb  3 20:04 agis_schedconf.cvmfs.json
[2026-02-03 23:59:27] -rw-------. 1 boinc boinc       415 Feb  3 20:04 workernode_map.json
[2026-02-03 23:59:27] drwx------. 5 boinc boinc      4096 Feb  3 20:04 pilot3
[2026-02-03 23:59:27] -rw-------. 1 boinc boinc 180488364 Feb  3 23:58 HITS.48318034._007139.pool.root.1
[2026-02-03 23:59:27] -rw-r--r--. 1 boinc boinc       532 Feb  3 23:58 boinc_task_state.xml
[2026-02-03 23:59:27] -rw-------. 1 boinc boinc      1019 Feb  3 23:58 memory_monitor_summary.json
[2026-02-03 23:59:27] -rw-------. 1 boinc boinc   1511668 Feb  3 23:58 agis_ddmendpoints.agis.ALL.json
[2026-02-03 23:59:27] -rw-------. 1 boinc boinc    454746 Feb  3 23:58 log.48318034._007139.job.log.tgz.1
[2026-02-03 23:59:27] -rw-------. 1 boinc boinc      6314 Feb  3 23:58 heartbeat.json
[2026-02-03 23:59:27] -rw-r--r--. 1 boinc boinc      8192 Feb  3 23:59 boinc_mmap_file
[2026-02-03 23:59:27] -rw-r--r--. 1 boinc boinc        28 Feb  3 23:59 wrapper_checkpoint.txt
[2026-02-03 23:59:27] -rw-------. 1 boinc boinc        95 Feb  3 23:59 pilot_heartbeat.json
[2026-02-03 23:59:27] -rw-------. 1 boinc boinc       890 Feb  3 23:59 pilotlog.txt
[2026-02-03 23:59:27] -rw-------. 1 boinc boinc   1970801 Feb  3 23:59 log.48318034._007139.job.log.1
[2026-02-03 23:59:27] -rw-------. 1 boinc boinc       357 Feb  3 23:59 output.list
[2026-02-03 23:59:27] -rw-r--r--. 1 boinc boinc       620 Feb  3 23:59 runtime_log
[2026-02-03 23:59:27] -rw-------. 1 boinc boinc   2447360 Feb  3 23:59 result.tar.gz
[2026-02-03 23:59:27] -rw-r--r--. 1 boinc boinc      8816 Feb  3 23:59 runtime_log.err
[2026-02-03 23:59:27] -rw-------. 1 boinc boinc       656 Feb  3 23:59 7BXNDmRiN78nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmXIUKDm6hpdqm.diag
[2026-02-03 23:59:27] -rw-r--r--. 1 boinc boinc     20645 Feb  3 23:59 stderr.txt
[2026-02-03 23:59:27] HITS file was successfully produced:
[2026-02-03 23:59:27] -rw-------. 1 boinc boinc 180488364 Feb  3 23:58 shared/HITS.pool.root.1
[2026-02-03 23:59:27]  *** Contents of shared directory: ***
[2026-02-03 23:59:27] total 661396
[2026-02-03 23:59:27] -rw-r--r--. 2 boinc boinc 493712179 Feb  3 20:03 ATLAS.root_0
[2026-02-03 23:59:27] -rw-r--r--. 2 boinc boinc     15845 Feb  3 20:03 start_atlas.sh
[2026-02-03 23:59:27] -rw-r--r--. 2 boinc boinc    597767 Feb  3 20:03 input.tar.gz
[2026-02-03 23:59:27] -rw-------. 1 boinc boinc 180488364 Feb  3 23:58 HITS.pool.root.1
[2026-02-03 23:59:27] -rw-------. 1 boinc boinc   2447360 Feb  3 23:59 result.tar.gz
23:59:28 (27630): run_atlas exited; CPU time 55498.699084
23:59:28 (27630): called boinc_finish(0)

</stderr_txt>
]]>

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