Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:16:12 (3891397): wrapper (7.7.26015): starting
05:16:12 (3891397): wrapper: running run_atlas (--nthreads 6)
[2026-02-04 05:16:12] Arguments: --nthreads 6
[2026-02-04 05:16:12] Threads: 6
[2026-02-04 05:16:12] Checking for CVMFS
[2026-02-04 05:16:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-04 05:16:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-04 05:16:31] Running cvmfs_config stat atlas.cern.ch
[2026-02-04 05:16:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-04 05:16:32] 2.13.3.0 3793838 781 63528 155843 2 9 14998261 20971520 929 130560 0 325703 99.979 30020 15 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-02-04 05:16:32] CVMFS is ok
[2026-02-04 05:16:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 05:16:32] Checking for apptainer binary...
[2026-02-04 05:16:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-04 05:16:32] Running /usr/bin/apptainer --version
[2026-02-04 05:16:32] apptainer version 1.4.5-2.el9
[2026-02-04 05:16:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 05:16:33] testio005
[2026-02-04 05:16:33] apptainer works
[2026-02-04 05:16:33] Set ATHENA_PROC_NUMBER=6
[2026-02-04 05:16:33] Set ATHENA_CORE_NUMBER=6
[2026-02-04 05:16:33] Starting ATLAS job with PandaID=6993748996
[2026-02-04 05:16:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 07:33:33]  *** The last 200 lines of the pilot log: ***
[2026-02-04 07:33:33] 2026-02-03 22:32:27,870 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/2/workernode_map.json
[2026-02-04 07:33:33] 2026-02-03 22:32:27,871 | INFO     | this job has now completed (state=finished)
[2026-02-04 07:33:33] 2026-02-03 22:32:27,871 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-04 07:33:33] 2026-02-03 22:32:27,871 | INFO     | log transfer has been attempted: DONE
[2026-02-04 07:33:33] 2026-02-03 22:32:27,871 | INFO     | job 6993748996 has finished - writing final server update
[2026-02-04 07:33:33] 2026-02-03 22:32:27,871 | INFO     | total number of processed events: 400 (read)
[2026-02-04 07:33:33] 2026-02-03 22:32:27,875 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6993748996/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 07:33:33] 2026-02-03 22:32:27,875 | INFO     | extracted standard info from prmon json
[2026-02-04 07:33:33] 2026-02-03 22:32:27,876 | INFO     | extracted standard memory fields from prmon json
[2026-02-04 07:33:33] 2026-02-03 22:32:27,876 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-04 07:33:33] 2026-02-03 22:32:27,876 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-04 07:33:33] 2026-02-03 22:32:27,876 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-04 07:33:33] 2026-02-03 22:32:27,878 | INFO     | fitting pss+swap vs Time
[2026-02-04 07:33:33] 2026-02-03 22:32:27,879 | INFO     | sum of square deviations: 713224301.2954576
[2026-02-04 07:33:33] 2026-02-03 22:32:27,879 | INFO     | sum of deviations: -23001247819.52274
[2026-02-04 07:33:33] 2026-02-03 22:32:27,880 | INFO     | mean x: 1770153912.6136363
[2026-02-04 07:33:33] 2026-02-03 22:32:27,880 | INFO     | mean y: 2604805.0681818184
[2026-02-04 07:33:33] 2026-02-03 22:32:27,880 | INFO     | intersect: 57089483012.62564
[2026-02-04 07:33:33] 2026-02-03 22:32:27,880 | INFO     | chi2: 1.9761283324091439
[2026-02-04 07:33:33] 2026-02-03 22:32:27,880 | INFO     | sum of square deviations: 635218111.2283442
[2026-02-04 07:33:33] 2026-02-03 22:32:27,881 | INFO     | sum of deviations: -20407731610.622055
[2026-02-04 07:33:33] 2026-02-03 22:32:27,881 | INFO     | mean x: 1770153760.1181102
[2026-02-04 07:33:33] 2026-02-03 22:32:27,881 | INFO     | mean y: 2609877.57480315
[2026-02-04 07:33:33] 2026-02-03 22:32:27,881 | INFO     | intersect: 56872560855.77972
[2026-02-04 07:33:33] 2026-02-03 22:32:27,882 | INFO     | chi2: 1.9765148640812051
[2026-02-04 07:33:33] 2026-02-03 22:32:27,882 | INFO     | current chi2=1.9765148640812051 (change=-0.01956004909812884 %)
[2026-02-04 07:33:33] 2026-02-03 22:32:27,882 | INFO     | right removable region: 126
[2026-02-04 07:33:33] 2026-02-03 22:32:27,882 | INFO     | sum of square deviations: 635208961.2283442
[2026-02-04 07:33:33] 2026-02-03 22:32:27,883 | INFO     | sum of deviations: -45671709841.196846
[2026-02-04 07:33:33] 2026-02-03 22:32:27,883 | INFO     | mean x: 1770154065.1181102
[2026-02-04 07:33:33] 2026-02-03 22:32:27,883 | INFO     | mean y: 2648403.346456693
[2026-02-04 07:33:33] 2026-02-03 22:32:27,883 | INFO     | intersect: 127277242703.70453
[2026-02-04 07:33:33] 2026-02-03 22:32:27,883 | INFO     | chi2: 0.2176140354898027
[2026-02-04 07:33:33] 2026-02-03 22:32:27,883 | INFO     | current chi2=0.2176140354898027 (change=88.98785914250294 %)
[2026-02-04 07:33:33] 2026-02-03 22:32:27,884 | INFO     | sum of square deviations: 563100708.6557356
[2026-02-04 07:33:33] 2026-02-03 22:32:27,884 | INFO     | sum of deviations: -43210232941.00001
[2026-02-04 07:33:33] 2026-02-03 22:32:27,884 | INFO     | mean x: 1770154217.6229508
[2026-02-04 07:33:33] 2026-02-03 22:32:27,884 | INFO     | mean y: 2643125.5
[2026-02-04 07:33:33] 2026-02-03 22:32:27,884 | INFO     | intersect: 135837627719.2496
[2026-02-04 07:33:33] 2026-02-03 22:32:27,885 | INFO     | chi2: 0.19851463024831717
[2026-02-04 07:33:33] 2026-02-03 22:32:27,885 | INFO     | current chi2=0.19851463024831717 (change=8.776734091850674 %)
[2026-02-04 07:33:33] 2026-02-03 22:32:27,885 | INFO     | left removable region: 20
[2026-02-04 07:33:33] 2026-02-03 22:32:27,885 | INFO     | sum of square deviations: 369352020.3773592
[2026-02-04 07:33:33] 2026-02-03 22:32:27,886 | INFO     | sum of deviations: -32184691964.245296
[2026-02-04 07:33:33] 2026-02-03 22:32:27,886 | INFO     | mean x: 1770154339.6415095
[2026-02-04 07:33:33] 2026-02-03 22:32:27,886 | INFO     | mean y: 2632288.283018868
[2026-02-04 07:33:33] 2026-02-03 22:32:27,886 | INFO     | intersect: 154250799368.36847
[2026-02-04 07:33:33] 2026-02-03 22:32:27,886 | INFO     | chi2: 0.18081764120357607
[2026-02-04 07:33:33] 2026-02-03 22:32:27,886 | INFO     | current memory leak: -87.14 B/s (using 106 data points, chi2=0.18)
[2026-02-04 07:33:33] 2026-02-03 22:32:27,887 | INFO     | could have reported an average CPU frequency of 3332 MHz (8 samples)
[2026-02-04 07:33:33] 2026-02-03 22:32:27,887 | INFO     | ..............................
[2026-02-04 07:33:33] 2026-02-03 22:32:27,887 | INFO     | . Timing measurements:
[2026-02-04 07:33:33] 2026-02-03 22:32:27,887 | INFO     | . get job = 0 s
[2026-02-04 07:33:33] 2026-02-03 22:32:27,887 | INFO     | . initial setup = 26 s
[2026-02-04 07:33:33] 2026-02-03 22:32:27,887 | INFO     | . payload setup = 6 s
[2026-02-04 07:33:33] 2026-02-03 22:32:27,887 | INFO     | . stage-in = 0 s
[2026-02-04 07:33:33] 2026-02-03 22:32:27,887 | INFO     | . payload execution = 8030 s
[2026-02-04 07:33:33] 2026-02-03 22:32:27,887 | INFO     | . stage-out = 0 s
[2026-02-04 07:33:33] 2026-02-03 22:32:27,888 | INFO     | . log creation = 0 s
[2026-02-04 07:33:33] 2026-02-03 22:32:27,888 | INFO     | ..............................
[2026-02-04 07:33:33] 2026-02-03 22:32:27,972 | INFO     | 
[2026-02-04 07:33:33] 2026-02-03 22:32:27,972 | INFO     | job summary report
[2026-02-04 07:33:33] 2026-02-03 22:32:27,972 | INFO     | --------------------------------------------------
[2026-02-04 07:33:33] 2026-02-03 22:32:27,973 | INFO     | PanDA job id: 6993748996
[2026-02-04 07:33:33] 2026-02-03 22:32:27,973 | INFO     | task id: 48395933
[2026-02-04 07:33:33] 2026-02-03 22:32:27,973 | INFO     | errors: (none)
[2026-02-04 07:33:33] 2026-02-03 22:32:27,973 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 07:33:33] 2026-02-03 22:32:27,973 | INFO     | pilot state: finished 
[2026-02-04 07:33:33] 2026-02-03 22:32:27,973 | INFO     | transexitcode: 0
[2026-02-04 07:33:33] 2026-02-03 22:32:27,973 | INFO     | exeerrorcode: 0
[2026-02-04 07:33:33] 2026-02-03 22:32:27,973 | INFO     | exeerrordiag: 
[2026-02-04 07:33:33] 2026-02-03 22:32:27,973 | INFO     | exitcode: 0
[2026-02-04 07:33:33] 2026-02-03 22:32:27,974 | INFO     | exitmsg: OK
[2026-02-04 07:33:33] 2026-02-03 22:32:27,974 | INFO     | cpuconsumptiontime: 45273 s
[2026-02-04 07:33:33] 2026-02-03 22:32:27,974 | INFO     | nevents: 400
[2026-02-04 07:33:33] 2026-02-03 22:32:27,974 | INFO     | neventsw: 0
[2026-02-04 07:33:33] 2026-02-03 22:32:27,974 | INFO     | pid: 3900102
[2026-02-04 07:33:33] 2026-02-03 22:32:27,974 | INFO     | pgrp: 3900102
[2026-02-04 07:33:33] 2026-02-03 22:32:27,974 | INFO     | corecount: 6
[2026-02-04 07:33:33] 2026-02-03 22:32:27,974 | INFO     | event service: False
[2026-02-04 07:33:33] 2026-02-03 22:32:27,975 | INFO     | sizes: {0: 2278285, 11: 2278285, 8040: 2306103, 8041: 2315157, 8042: 2315295}
[2026-02-04 07:33:33] 2026-02-03 22:32:27,975 | INFO     | --------------------------------------------------
[2026-02-04 07:33:33] 2026-02-03 22:32:27,975 | INFO     | 
[2026-02-04 07:33:33] 2026-02-03 22:32:27,975 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2026-02-04 07:33:33] 2026-02-03 22:32:27,995 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 07:33:33] 2026-02-03 22:32:27,995 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 07:33:33] 2026-02-03 22:32:27,995 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 07:33:33] 2026-02-03 22:32:27,996 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 07:33:33] 2026-02-03 22:32:27,996 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 07:33:33] 2026-02-03 22:32:27,996 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 07:33:33] 2026-02-03 22:32:27,996 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 07:33:33] 2026-02-03 22:32:27,996 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 07:33:33] 2026-02-03 22:32:27,996 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 07:33:33] 2026-02-03 22:32:27,997 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 07:33:33] 2026-02-03 22:32:27,997 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 07:33:33] 2026-02-03 22:32:27,997 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 07:33:33] 2026-02-03 22:32:27,997 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 07:33:33] 2026-02-03 22:32:27,997 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 07:33:33] 2026-02-03 22:32:27,997 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 07:33:33] 2026-02-03 22:32:27,998 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 07:33:33] 2026-02-03 22:32:27,998 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 07:33:33] 2026-02-03 22:32:27,998 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 07:33:33] 2026-02-03 22:32:27,998 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 07:33:33] 2026-02-03 22:32:27,998 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 07:33:33] 2026-02-03 22:32:27,998 | INFO     | job 6993748996 has completed (purged errors)
[2026-02-04 07:33:33] 2026-02-03 22:32:27,999 | INFO     | overall cleanup function is called
[2026-02-04 07:33:33] 2026-02-03 22:32:28,114 | INFO     | PID=3895511 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-04 07:33:33] 2026-02-03 22:32:28,114 | INFO     | .. there are 2 such processes running
[2026-02-04 07:33:33] 2026-02-03 22:32:29,006 | INFO     | --- collectZombieJob: --- 10, [3900102]
[2026-02-04 07:33:33] 2026-02-03 22:32:29,006 | INFO     | zombie collector waiting for pid 3900102
[2026-02-04 07:33:33] 2026-02-03 22:32:29,006 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 07:33:33] 2026-02-03 22:32:29,006 | INFO     | collected zombie processes
[2026-02-04 07:33:33] 2026-02-03 22:32:29,006 | INFO     | will attempt to kill all subprocesses of pid=3900102
[2026-02-04 07:33:33] 2026-02-03 22:32:29,108 | INFO     | process IDs to be killed: [3900102] (in reverse order)
[2026-02-04 07:33:33] 2026-02-03 22:32:29,153 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 07:33:33] 2026-02-03 22:32:29,153 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 07:33:33] 2026-02-03 22:32:29,157 | INFO     | did not find any defunct processes belonging to 3900102
[2026-02-04 07:33:33] 2026-02-03 22:32:29,160 | INFO     | did not find any defunct processes belonging to 3900102
[2026-02-04 07:33:33] 2026-02-03 22:32:29,160 | INFO     | ready for new job
[2026-02-04 07:33:33] 2026-02-03 22:32:29,160 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 07:33:33] 2026-02-03 22:32:29,162 | INFO     | **************************************
[2026-02-04 07:33:33] 2026-02-03 22:32:29,162 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 07:33:33] 2026-02-03 22:32:29,162 | INFO     | **************************************
[2026-02-04 07:33:33] 2026-02-03 22:32:29,162 | INFO     | 
[2026-02-04 07:33:33] 2026-02-03 22:32:29,163 | INFO     | architecture information:
[2026-02-04 07:33:33] 2026-02-03 22:32:29,164 | INFO     | executing command: cat /etc/os-release
[2026-02-04 07:33:33] 2026-02-03 22:32:29,177 | INFO     | cat /etc/os-release:
[2026-02-04 07:33:33] NAME="CentOS Linux"
[2026-02-04 07:33:33] VERSION="7 (Core)"
[2026-02-04 07:33:33] ID="centos"
[2026-02-04 07:33:33] ID_LIKE="rhel fedora"
[2026-02-04 07:33:33] VERSION_ID="7"
[2026-02-04 07:33:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 07:33:33] ANSI_COLOR="0;31"
[2026-02-04 07:33:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 07:33:33] HOME_URL="https://www.centos.org/"
[2026-02-04 07:33:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 07:33:33] 
[2026-02-04 07:33:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 07:33:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 07:33:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 07:33:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 07:33:33] 
[2026-02-04 07:33:33] 2026-02-03 22:32:29,178 | INFO     | **************************************
[2026-02-04 07:33:33] 2026-02-03 22:32:29,680 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2026-02-04 07:33:33] 2026-02-03 22:32:29,694 | INFO     | sufficient remaining disk space (92625960960 B)
[2026-02-04 07:33:33] 2026-02-03 22:32:29,695 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 07:33:33] 2026-02-03 22:32:29,695 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 07:33:33] 2026-02-03 22:32:29,695 | INFO     | update_server=False
[2026-02-04 07:33:33] 2026-02-03 22:32:29,695 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 07:33:33] 2026-02-03 22:32:29,695 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 07:33:33] 2026-02-03 22:32:29,695 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 07:33:33] 2026-02-03 22:32:30,172 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-04 07:33:33] 2026-02-03 22:32:30,172 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-04 07:33:33] 2026-02-03 22:32:30,172 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 07:33:33] 2026-02-03 22:32:30,172 | INFO     | will abort loop
[2026-02-04 07:33:33] 2026-02-03 22:32:30,431 | INFO     | all job control threads have been joined
[2026-02-04 07:33:33] 2026-02-03 22:32:30,466 | INFO     | all data control threads have been joined
[2026-02-04 07:33:33] 2026-02-03 22:32:30,614 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 07:33:33] 2026-02-03 22:32:30,700 | INFO     | [job] queue monitor thread has finished
[2026-02-04 07:33:33] 2026-02-03 22:32:30,700 | INFO     | [job] retrieve thread has finished
[2026-02-04 07:33:33] 2026-02-03 22:32:30,849 | INFO     | all payload control threads have been joined
[2026-02-04 07:33:33] 2026-02-03 22:32:30,921 | INFO     | [payload] failed_post thread has finished
[2026-02-04 07:33:33] 2026-02-03 22:32:31,090 | INFO     | [data] copytool_in thread has finished
[2026-02-04 07:33:33] 2026-02-03 22:32:31,177 | INFO     | [job] job monitor thread has finished
[2026-02-04 07:33:33] 2026-02-03 22:32:31,202 | INFO     | [job] validate thread has finished
[2026-02-04 07:33:33] 2026-02-03 22:32:31,436 | INFO     | [job] control thread has finished
[2026-02-04 07:33:33] 2026-02-03 22:32:31,472 | INFO     | [data] control thread has finished
[2026-02-04 07:33:33] 2026-02-03 22:32:31,570 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 07:33:33] 2026-02-03 22:32:31,854 | INFO     | [payload] control thread has finished
[2026-02-04 07:33:33] 2026-02-03 22:32:31,871 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 07:33:33] 2026-02-03 22:32:32,131 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 07:33:33] 2026-02-03 22:32:32,203 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 07:33:33] 2026-02-03 22:32:32,254 | INFO     | [payload] validate_post thread has finished
[2026-02-04 07:33:33] 2026-02-03 22:32:32,619 | INFO     | [data] copytool_out thread has finished
[2026-02-04 07:33:33] 2026-02-03 22:32:33,701 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 07:33:33] 2026-02-03 22:32:47,897 [wrapper] supervise_pilot (15 min periods counter: 10)
[2026-02-04 07:33:33] 2026-02-03 22:33:00,293 | INFO     | PID=3895511 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-04 07:33:33] 2026-02-03 22:33:00,293 | INFO     | .. there are 2 such processes running
[2026-02-04 07:33:33] 2026-02-03 22:33:00,293 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 07:33:33] 2026-02-03 22:33:00,294 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 07:33:33] 2026-02-03 22:33:00,294 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 07:33:33] 2026-02-03 22:33:27,764 | INFO     | [monitor] cgroup control has ended
[2026-02-04 07:33:33] 2026-02-03 22:33:28,080 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140290165258048)>', '<ExcThread(monitor, started 140289796728576)>']
[2026-02-04 07:33:33] 2026-02-03 22:33:28,431 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 07:33:33] 2026-02-03 22:33:28,431 | INFO     | [monitor] control thread has ended
[2026-02-04 07:33:33] 2026-02-03 22:33:33,105 | INFO     | all workflow threads have been joined
[2026-02-04 07:33:33] 2026-02-03 22:33:33,105 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 07:33:33] 2026-02-03 22:33:33,105 | INFO     | traces error code: 0
[2026-02-04 07:33:33] 2026-02-03 22:33:33,105 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 07:33:33] 2026-02-03 22:33:33,208 [wrapper] ==== pilot stdout END ====
[2026-02-04 07:33:33] 2026-02-03 22:33:33,212 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 07:33:33] 2026-02-03 22:33:33,218 [wrapper] pilotpid: 3895511
[2026-02-04 07:33:33] 2026-02-03 22:33:33,221 [wrapper] Pilot exit status: 0
[2026-02-04 07:33:33] 2026-02-03 22:33:33,231 [wrapper] pandaids: 6993748996
[2026-02-04 07:33:33] 2026-02-03 22:33:33,260 [wrapper] cleanup supervisor_pilot 3918773 3895512
[2026-02-04 07:33:33] 2026-02-03 22:33:33,263 [wrapper] Test setup, not cleaning
[2026-02-04 07:33:33] 2026-02-03 22:33:33,265 [wrapper] apfmon messages muted
[2026-02-04 07:33:33] 2026-02-03 22:33:33,267 [wrapper] ==== wrapper stdout END ====
[2026-02-04 07:33:33] 2026-02-03 22:33:33,270 [wrapper] ==== wrapper stderr END ====
[2026-02-04 07:33:33]  *** Error codes and diagnostics ***
[2026-02-04 07:33:33]     "exeErrorCode": 0,
[2026-02-04 07:33:33]     "exeErrorDiag": "",
[2026-02-04 07:33:33]     "pilotErrorCode": 0,
[2026-02-04 07:33:33]     "pilotErrorDiag": "",
[2026-02-04 07:33:33]  *** Listing of results directory ***
[2026-02-04 07:33:33] total 492940
[2026-02-04 07:33:33] -rw-r--r--. 1 boinc boinc    584422 Feb  3 16:50 pilot3.tar.gz
[2026-02-04 07:33:33] -rwx------. 1 boinc boinc     36322 Feb  3 16:54 runpilot2-wrapper.sh
[2026-02-04 07:33:33] -rw-r--r--. 1 boinc boinc      5111 Feb  3 16:57 queuedata.json
[2026-02-04 07:33:33] -rw-r--r--. 1 boinc boinc       100 Feb  4 05:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 07:33:33] -rwxr-xr-x. 1 boinc boinc      7986 Feb  4 05:16 run_atlas
[2026-02-04 07:33:33] -rw-r--r--. 1 boinc boinc       105 Feb  4 05:16 job.xml
[2026-02-04 07:33:33] -rw-r--r--. 1 boinc boinc      9356 Feb  4 05:16 init_data.xml
[2026-02-04 07:33:33] -rw-r--r--. 2 boinc boinc 296444942 Feb  4 05:16 EVNT.48395931._000027.pool.root.1
[2026-02-04 07:33:33] -rw-r--r--. 2 boinc boinc     15845 Feb  4 05:16 start_atlas.sh
[2026-02-04 07:33:33] drwxrwx--x. 2 boinc boinc        68 Feb  4 05:16 shared
[2026-02-04 07:33:33] -rw-r--r--. 2 boinc boinc    597756 Feb  4 05:16 input.tar.gz
[2026-02-04 07:33:33] -rw-r--r--. 1 boinc boinc         0 Feb  4 05:16 boinc_lockfile
[2026-02-04 07:33:33] -rw-r--r--. 1 boinc boinc      2534 Feb  4 05:16 pandaJob.out
[2026-02-04 07:33:33] -rw-------. 1 boinc boinc   1009252 Feb  4 05:18 agis_schedconf.cvmfs.json
[2026-02-04 07:33:33] -rw-------. 1 boinc boinc   1511668 Feb  4 05:18 agis_ddmendpoints.agis.ALL.json
[2026-02-04 07:33:33] -rw-------. 1 boinc boinc       424 Feb  4 05:18 workernode_map.json
[2026-02-04 07:33:33] drwx------. 5 boinc boinc      4096 Feb  4 05:18 pilot3
[2026-02-04 07:33:33] -rw-------. 1 boinc boinc 201405572 Feb  4 07:31 HITS.48395933._000653.pool.root.1
[2026-02-04 07:33:33] -rw-------. 1 boinc boinc        95 Feb  4 07:32 pilot_heartbeat.json
[2026-02-04 07:33:33] -rw-r--r--. 1 boinc boinc       529 Feb  4 07:32 boinc_task_state.xml
[2026-02-04 07:33:33] -rw-------. 1 boinc boinc      1017 Feb  4 07:32 memory_monitor_summary.json
[2026-02-04 07:33:33] -rw-------. 1 boinc boinc    330194 Feb  4 07:32 log.48395933._000653.job.log.tgz.1
[2026-02-04 07:33:33] -rw-------. 1 boinc boinc      6298 Feb  4 07:32 heartbeat.json
[2026-02-04 07:33:33] -rw-r--r--. 1 boinc boinc      8192 Feb  4 07:33 boinc_mmap_file
[2026-02-04 07:33:33] -rw-r--r--. 1 boinc boinc        27 Feb  4 07:33 wrapper_checkpoint.txt
[2026-02-04 07:33:33] -rw-------. 1 boinc boinc      5005 Feb  4 07:33 pilotlog.txt
[2026-02-04 07:33:33] -rw-------. 1 boinc boinc   1163195 Feb  4 07:33 log.48395933._000653.job.log.1
[2026-02-04 07:33:33] -rw-------. 1 boinc boinc       357 Feb  4 07:33 output.list
[2026-02-04 07:33:33] -rw-r--r--. 1 boinc boinc       620 Feb  4 07:33 runtime_log
[2026-02-04 07:33:33] -rw-------. 1 boinc boinc   1515520 Feb  4 07:33 result.tar.gz
[2026-02-04 07:33:33] -rw-------. 1 boinc boinc       643 Feb  4 07:33 SEbLDmDQQ78n9Rq4apOajLDm4fhM0noT9bVooX4SDmmEUKDmrNdUlm.diag
[2026-02-04 07:33:33] -rw-r--r--. 1 boinc boinc      8774 Feb  4 07:33 runtime_log.err
[2026-02-04 07:33:33] -rw-r--r--. 1 boinc boinc     21012 Feb  4 07:33 stderr.txt
[2026-02-04 07:33:33] HITS file was successfully produced:
[2026-02-04 07:33:33] -rw-------. 1 boinc boinc 201405572 Feb  4 07:31 shared/HITS.pool.root.1
[2026-02-04 07:33:33]  *** Contents of shared directory: ***
[2026-02-04 07:33:33] total 488268
[2026-02-04 07:33:33] -rw-r--r--. 2 boinc boinc 296444942 Feb  4 05:16 ATLAS.root_0
[2026-02-04 07:33:33] -rw-r--r--. 2 boinc boinc     15845 Feb  4 05:16 start_atlas.sh
[2026-02-04 07:33:33] -rw-r--r--. 2 boinc boinc    597756 Feb  4 05:16 input.tar.gz
[2026-02-04 07:33:33] -rw-------. 1 boinc boinc 201405572 Feb  4 07:31 HITS.pool.root.1
[2026-02-04 07:33:33] -rw-------. 1 boinc boinc   1515520 Feb  4 07:33 result.tar.gz
07:33:34 (3891397): run_atlas exited; CPU time 45361.069851
07:33:34 (3891397): called boinc_finish(0)

</stderr_txt>
]]>

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