Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
21:00:16 (1383704): wrapper (7.7.26015): starting
21:00:16 (1383704): wrapper: running run_atlas (--nthreads 3)
[2026-02-03 21:00:16] Arguments: --nthreads 3
[2026-02-03 21:00:16] Threads: 3
[2026-02-03 21:00:16] Checking for CVMFS
[2026-02-03 21:00:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-03 21:00:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-03 21:00:16] Running cvmfs_config stat atlas.cern.ch
[2026-02-03 21:00:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-03 21:00:16] 2.9.2.0 1077466 1891 77548 155842 0 50 25559305 36864000 0 130560 0 797000 99.980 75727 15112 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-03 21:00:16] CVMFS is ok
[2026-02-03 21:00:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-03 21:00:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-03 21:00:16] Further information can be found at the LHC@home message board.
[2026-02-03 21:00:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 21:00:16] Checking for apptainer binary...
[2026-02-03 21:00:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-03 21:00:16] Running /usr/bin/apptainer --version
[2026-02-03 21:00:16] apptainer version 1.4.1-1.1
[2026-02-03 21:00:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 21:00:16] magicA246a
[2026-02-03 21:00:16] apptainer works
[2026-02-03 21:00:16] Set ATHENA_PROC_NUMBER=3
[2026-02-03 21:00:16] Set ATHENA_CORE_NUMBER=3
[2026-02-03 21:00:16] Starting ATLAS job with PandaID=6993746906
[2026-02-03 21:00:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-03 22:25:37]  *** The last 200 lines of the pilot log: ***
[2026-02-03 22:25:37] 2026-02-03 21:24:53,500 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-03 22:25:37] 2026-02-03 21:24:54,005 | INFO     | [job] queue monitor thread has finished
[2026-02-03 22:25:37] 2026-02-03 21:24:54,006 | INFO     | [job] retrieve thread has finished
[2026-02-03 22:25:37] 2026-02-03 21:24:54,018 | INFO     | [job] create_data_payload thread has finished
[2026-02-03 22:25:37] 2026-02-03 21:24:54,030 | INFO     | [payload] failed_post thread has finished
[2026-02-03 22:25:37] 2026-02-03 21:24:54,081 | INFO     | [payload] validate_pre thread has finished
[2026-02-03 22:25:37] 2026-02-03 21:24:54,162 | INFO     | [data] copytool_in thread has finished
[2026-02-03 22:25:37] 2026-02-03 21:24:54,164 | INFO     | [payload] execute_payloads thread has finished
[2026-02-03 22:25:37] 2026-02-03 21:24:54,164 | INFO     | [data] control thread has finished
[2026-02-03 22:25:37] 2026-02-03 21:24:54,255 | INFO     | [payload] control thread has finished
[2026-02-03 22:25:37] 2026-02-03 21:24:54,344 | INFO     | all job control threads have been joined
[2026-02-03 22:25:37] 2026-02-03 21:24:54,413 | INFO     | [job] job monitor thread has finished
[2026-02-03 22:25:37] 2026-02-03 21:24:54,638 | INFO     | [payload] validate_post thread has finished
[2026-02-03 22:25:37] 2026-02-03 21:24:55,080 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-03 22:25:37] 2026-02-03 21:24:55,349 | INFO     | [job] control thread has finished
[2026-02-03 22:25:37] 2026-02-03 21:24:55,407 | INFO     | [job] validate thread has finished
[2026-02-03 22:25:37] 2026-02-03 21:24:55,506 | INFO     | [data] copytool_out thread has finished
[2026-02-03 22:25:37] 2026-02-03 21:24:57,007 | INFO     | [data] queue_monitor thread has finished
[2026-02-03 22:25:37] 2026-02-03 21:25:22,844 | INFO     | PID=1387745 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-03 22:25:37] 2026-02-03 21:25:22,844 | INFO     | found 0 job(s) in 20 queues
[2026-02-03 22:25:37] 2026-02-03 21:25:22,844 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-03 22:25:37] 2026-02-03 21:25:22,844 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-03 22:25:37] 2026-02-03 21:25:31,179 | INFO     | [monitor] cgroup control has ended
[2026-02-03 22:25:37] 2026-02-03 21:25:32,655 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140338829543232)>', '<ExcThread(monitor, started 140338484193024)>']
[2026-02-03 22:25:37] 2026-02-03 21:25:32,897 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-03 22:25:37] 2026-02-03 21:25:32,897 | INFO     | [monitor] control thread has ended
[2026-02-03 22:25:37] 2026-02-03 21:25:37,663 | INFO     | all workflow threads have been joined
[2026-02-03 22:25:37] 2026-02-03 21:25:37,664 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-03 22:25:37] 2026-02-03 21:25:37,664 | INFO     | traces error code: 0
[2026-02-03 22:25:37] 2026-02-03 21:25:37,664 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-03 22:25:37] 2026-02-03 21:25:37,717 [wrapper] ==== pilot stdout END ====
[2026-02-03 22:25:37] 2026-02-03 21:25:37,720 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-03 22:25:37] 2026-02-03 21:25:37,722 [wrapper] pilotpid: 1387745
[2026-02-03 22:25:37] 2026-02-03 21:25:37,724 [wrapper] Pilot exit status: 0
[2026-02-03 22:25:37] 2026-02-03 21:25:37,731 [wrapper] pandaids: 6993746906
[2026-02-03 22:25:37] 2026-02-03 21:25:37,751 [wrapper] cleanup supervisor_pilot 1398250 1387746
[2026-02-03 22:25:37] 2026-02-03 21:25:37,753 [wrapper] Test setup, not cleaning
[2026-02-03 22:25:37] 2026-02-03 21:25:37,755 [wrapper] apfmon messages muted
[2026-02-03 22:25:37] 2026-02-03 21:25:37,758 [wrapper] ==== wrapper stdout END ====
[2026-02-03 22:25:37] 2026-02-03 21:25:37,760 [wrapper] ==== wrapper stderr END ====
[2026-02-03 22:25:37]  *** Error codes and diagnostics ***
[2026-02-03 22:25:37]     "exeErrorCode": 0,
[2026-02-03 22:25:37]     "exeErrorDiag": "",
[2026-02-03 22:25:37]     "pilotErrorCode": 0,
[2026-02-03 22:25:37]     "pilotErrorDiag": "",
[2026-02-03 22:25:37]  *** Listing of results directory ***
[2026-02-03 22:25:37] total 668516
[2026-02-03 22:25:37] -rw-r--r-- 1 boinc boinc    584422 Feb  3 04:09 pilot3.tar.gz
[2026-02-03 22:25:37] -rwx------ 1 boinc boinc     36322 Feb  3 04:09 runpilot2-wrapper.sh
[2026-02-03 22:25:37] -rw-r--r-- 1 boinc boinc      5111 Feb  3 04:10 queuedata.json
[2026-02-03 22:25:37] -rw-r--r-- 1 boinc boinc       100 Feb  3 21:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-03 22:25:37] -rwxr-xr-x 1 boinc boinc      7986 Feb  3 21:00 run_atlas
[2026-02-03 22:25:37] -rw-r--r-- 1 boinc boinc       105 Feb  3 21:00 job.xml
[2026-02-03 22:25:37] -rw-r--r-- 2 boinc boinc 492846480 Feb  3 21:00 EVNT.48318032._000147.pool.root.1
[2026-02-03 22:25:37] -rw-r--r-- 2 boinc boinc    597765 Feb  3 21:00 input.tar.gz
[2026-02-03 22:25:37] -rw-r--r-- 2 boinc boinc     15845 Feb  3 21:00 start_atlas.sh
[2026-02-03 22:25:37] drwxrwx--x 2 boinc boinc      4096 Feb  3 21:00 shared
[2026-02-03 22:25:37] -rw-r--r-- 1 boinc boinc         0 Feb  3 21:00 boinc_setup_complete
[2026-02-03 22:25:37] -rw-r--r-- 1 boinc boinc      6447 Feb  3 21:00 init_data.xml
[2026-02-03 22:25:37] -rw-r--r-- 1 boinc boinc         0 Feb  3 21:00 boinc_lockfile
[2026-02-03 22:25:37] -rw-r--r-- 1 boinc boinc      2536 Feb  3 21:00 pandaJob.out
[2026-02-03 22:25:37] -rw------- 1 boinc boinc   1009252 Feb  3 21:00 agis_schedconf.cvmfs.json
[2026-02-03 22:25:37] -rw------- 1 boinc boinc   1511668 Feb  3 21:00 agis_ddmendpoints.agis.ALL.json
[2026-02-03 22:25:37] -rw------- 1 boinc boinc       427 Feb  3 21:00 workernode_map.json
[2026-02-03 22:25:37] drwx------ 5 boinc boinc      4096 Feb  3 21:00 pilot3
[2026-02-03 22:25:37] -rw------- 1 boinc boinc 185714493 Feb  3 22:24 HITS.48318034._006929.pool.root.1
[2026-02-03 22:25:37] -rw-r--r-- 1 boinc boinc       530 Feb  3 22:24 boinc_task_state.xml
[2026-02-03 22:25:37] -rw------- 1 boinc boinc      1017 Feb  3 22:24 memory_monitor_summary.json
[2026-02-03 22:25:37] -rw------- 1 boinc boinc    294913 Feb  3 22:24 log.48318034._006929.job.log.tgz.1
[2026-02-03 22:25:37] -rw------- 1 boinc boinc      6306 Feb  3 22:24 heartbeat.json
[2026-02-03 22:25:37] -rw-r--r-- 1 boinc boinc      8192 Feb  3 22:25 boinc_mmap_file
[2026-02-03 22:25:37] -rw------- 1 boinc boinc        95 Feb  3 22:25 pilot_heartbeat.json
[2026-02-03 22:25:37] -rw-r--r-- 1 boinc boinc        27 Feb  3 22:25 wrapper_checkpoint.txt
[2026-02-03 22:25:37] -rw------- 1 boinc boinc      4934 Feb  3 22:25 pilotlog.txt
[2026-02-03 22:25:37] -rw------- 1 boinc boinc    741353 Feb  3 22:25 log.48318034._006929.job.log.1
[2026-02-03 22:25:37] -rw------- 1 boinc boinc       357 Feb  3 22:25 output.list
[2026-02-03 22:25:37] -rw-r--r-- 1 boinc boinc       620 Feb  3 22:25 runtime_log
[2026-02-03 22:25:37] -rw------- 1 boinc boinc   1054720 Feb  3 22:25 result.tar.gz
[2026-02-03 22:25:37] -rw-r--r-- 1 boinc boinc      8916 Feb  3 22:25 runtime_log.err
[2026-02-03 22:25:37] -rw------- 1 boinc boinc       661 Feb  3 22:25 icwLDmfyL78n9Rq4apOajLDm4fhM0noT9bVooX4SDmzjTKDmGbGoLm.diag
[2026-02-03 22:25:37] -rw-r--r-- 1 boinc boinc      6531 Feb  3 22:25 stderr.txt
[2026-02-03 22:25:37] HITS file was successfully produced:
[2026-02-03 22:25:37] -rw------- 1 boinc boinc 185714493 Feb  3 22:24 shared/HITS.pool.root.1
[2026-02-03 22:25:37]  *** Contents of shared directory: ***
[2026-02-03 22:25:37] total 664300
[2026-02-03 22:25:37] -rw-r--r-- 2 boinc boinc 492846480 Feb  3 21:00 ATLAS.root_0
[2026-02-03 22:25:37] -rw-r--r-- 2 boinc boinc    597765 Feb  3 21:00 input.tar.gz
[2026-02-03 22:25:37] -rw-r--r-- 2 boinc boinc     15845 Feb  3 21:00 start_atlas.sh
[2026-02-03 22:25:37] -rw------- 1 boinc boinc 185714493 Feb  3 22:24 HITS.pool.root.1
[2026-02-03 22:25:37] -rw------- 1 boinc boinc   1054720 Feb  3 22:25 result.tar.gz
22:25:39 (1383704): run_atlas exited; CPU time 14540.041154
22:25:39 (1383704): called boinc_finish(0)

</stderr_txt>
]]>

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