Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:23:06 (3647231): wrapper (7.7.26015): starting
22:23:06 (3647231): wrapper: running run_atlas (--nthreads 4)
[2026-02-03 22:23:06] Arguments: --nthreads 4
[2026-02-03 22:23:06] Threads: 4
[2026-02-03 22:23:06] Checking for CVMFS
[2026-02-03 22:23:06] No cvmfs_config command found, will try listing directly
[2026-02-03 22:23:06] CVMFS is ok
[2026-02-03 22:23:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-03 22:23:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-03 22:23:06] Further information can be found at the LHC@home message board.
[2026-02-03 22:23:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 22:23:06] Checking for apptainer binary...
[2026-02-03 22:23:06] which: no apptainer in ((null))
[2026-02-03 22:23:06] apptainer is not installed, using version from CVMFS
[2026-02-03 22:23:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 22:23:06] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot92/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2026-02-03 22:23:06] apptainer works
[2026-02-03 22:23:06] Set ATHENA_PROC_NUMBER=4
[2026-02-03 22:23:06] Set ATHENA_CORE_NUMBER=4
[2026-02-03 22:23:06] Starting ATLAS job with PandaID=6993746487
[2026-02-03 22:23:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot92/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 00:50:37]  *** The last 200 lines of the pilot log: ***
[2026-02-04 00:50:37] 2026-02-03 23:47:03,396 | INFO     | preparing for final server update for job 6993746487 in state='finished'
[2026-02-04 00:50:37] 2026-02-03 23:47:03,396 | INFO     | reading metadata from: /scratch/boinc/var/slot92/slots/0/PanDA_Pilot-6993746487/jobReport.json
[2026-02-04 00:50:37] 2026-02-03 23:47:03,398 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot92/slots/0/workernode_map.json
[2026-02-04 00:50:37] 2026-02-03 23:47:03,399 | INFO     | this job has now completed (state=finished)
[2026-02-04 00:50:37] 2026-02-03 23:47:03,399 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-04 00:50:37] 2026-02-03 23:47:03,399 | INFO     | log transfer has been attempted: DONE
[2026-02-04 00:50:37] 2026-02-03 23:47:03,399 | INFO     | job 6993746487 has finished - writing final server update
[2026-02-04 00:50:37] 2026-02-03 23:47:03,399 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3203292/.job.ad'
[2026-02-04 00:50:37] 2026-02-03 23:47:03,400 | INFO     | total number of processed events: 400 (read)
[2026-02-04 00:50:37] 2026-02-03 23:47:03,420 | INFO     | using path: /scratch/boinc/var/slot92/slots/0/PanDA_Pilot-6993746487/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 00:50:37] 2026-02-03 23:47:03,421 | INFO     | extracted standard info from prmon json
[2026-02-04 00:50:37] 2026-02-03 23:47:03,421 | INFO     | extracted standard memory fields from prmon json
[2026-02-04 00:50:37] 2026-02-03 23:47:03,421 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-04 00:50:37] 2026-02-03 23:47:03,421 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-04 00:50:37] 2026-02-03 23:47:03,421 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-04 00:50:37] 2026-02-03 23:47:03,424 | INFO     | fitting pss+swap vs Time
[2026-02-04 00:50:37] 2026-02-03 23:47:03,424 | INFO     | sum of square deviations: 869188390.0
[2026-02-04 00:50:37] 2026-02-03 23:47:03,425 | INFO     | sum of deviations: 7069330748.000014
[2026-02-04 00:50:37] 2026-02-03 23:47:03,425 | INFO     | mean x: 1770158103.0
[2026-02-04 00:50:37] 2026-02-03 23:47:03,425 | INFO     | mean y: 2327547.5673758867
[2026-02-04 00:50:37] 2026-02-03 23:47:03,425 | INFO     | intersect: -14394819550.03626
[2026-02-04 00:50:37] 2026-02-03 23:47:03,425 | INFO     | chi2: 1.2982275045166083
[2026-02-04 00:50:37] 2026-02-03 23:47:03,425 | INFO     | sum of square deviations: 779958810.0
[2026-02-04 00:50:37] 2026-02-03 23:47:03,426 | INFO     | sum of deviations: 6921436644.499997
[2026-02-04 00:50:37] 2026-02-03 23:47:03,426 | INFO     | mean x: 1770157950.5
[2026-02-04 00:50:37] 2026-02-03 23:47:03,426 | INFO     | mean y: 2327294.6985294116
[2026-02-04 00:50:37] 2026-02-03 23:47:03,426 | INFO     | intersect: -15706240834.871943
[2026-02-04 00:50:37] 2026-02-03 23:47:03,426 | INFO     | chi2: 1.299650948144894
[2026-02-04 00:50:37] 2026-02-03 23:47:03,426 | INFO     | current chi2=1.299650948144894 (change=-0.10964516029227328 %)
[2026-02-04 00:50:37] 2026-02-03 23:47:03,426 | INFO     | right removable region: 135
[2026-02-04 00:50:37] 2026-02-03 23:47:03,427 | INFO     | sum of square deviations: 779958810.0
[2026-02-04 00:50:37] 2026-02-03 23:47:03,427 | INFO     | sum of deviations: -9109660273.0
[2026-02-04 00:50:37] 2026-02-03 23:47:03,427 | INFO     | mean x: 1770158255.5
[2026-02-04 00:50:37] 2026-02-03 23:47:03,427 | INFO     | mean y: 2354608.1911764704
[2026-02-04 00:50:37] 2026-02-03 23:47:03,428 | INFO     | intersect: 20677216062.7997
[2026-02-04 00:50:37] 2026-02-03 23:47:03,428 | INFO     | chi2: 0.013404737899707614
[2026-02-04 00:50:37] 2026-02-03 23:47:03,428 | INFO     | current chi2=0.013404737899707614 (change=98.9674584883565 %)
[2026-02-04 00:50:37] 2026-02-03 23:47:03,428 | INFO     | sum of square deviations: 697054930.0
[2026-02-04 00:50:37] 2026-02-03 23:47:03,429 | INFO     | sum of deviations: -7691127781.999999
[2026-02-04 00:50:37] 2026-02-03 23:47:03,429 | INFO     | mean x: 1770158408.0
[2026-02-04 00:50:37] 2026-02-03 23:47:03,429 | INFO     | mean y: 2351991.13740458
[2026-02-04 00:50:37] 2026-02-03 23:47:03,429 | INFO     | intersect: 19533832114.676147
[2026-02-04 00:50:37] 2026-02-03 23:47:03,429 | INFO     | chi2: 0.012830260317214863
[2026-02-04 00:50:37] 2026-02-03 23:47:03,429 | INFO     | current chi2=0.012830260317214863 (change=4.285630847771229 %)
[2026-02-04 00:50:37] 2026-02-03 23:47:03,429 | INFO     | left removable region: 20
[2026-02-04 00:50:37] 2026-02-03 23:47:03,429 | INFO     | sum of square deviations: 471562330.0
[2026-02-04 00:50:37] 2026-02-03 23:47:03,430 | INFO     | sum of deviations: -4805264629.999999
[2026-02-04 00:50:37] 2026-02-03 23:47:03,430 | INFO     | mean x: 1770158530.0
[2026-02-04 00:50:37] 2026-02-03 23:47:03,430 | INFO     | mean y: 2347280.747826087
[2026-02-04 00:50:37] 2026-02-03 23:47:03,430 | INFO     | intersect: 18040429698.615665
[2026-02-04 00:50:37] 2026-02-03 23:47:03,430 | INFO     | chi2: 0.010258359937104982
[2026-02-04 00:50:37] 2026-02-03 23:47:03,430 | INFO     | current memory leak: -10.19 B/s (using 115 data points, chi2=0.01)
[2026-02-04 00:50:37] 2026-02-03 23:47:03,431 | INFO     | could have reported an average CPU frequency of 2718 MHz (8 samples)
[2026-02-04 00:50:37] 2026-02-03 23:47:03,431 | INFO     | ..............................
[2026-02-04 00:50:37] 2026-02-03 23:47:03,431 | INFO     | . Timing measurements:
[2026-02-04 00:50:37] 2026-02-03 23:47:03,431 | INFO     | . get job = 0 s
[2026-02-04 00:50:37] 2026-02-03 23:47:03,431 | INFO     | . initial setup = 7 s
[2026-02-04 00:50:37] 2026-02-03 23:47:03,431 | INFO     | . payload setup = 8 s
[2026-02-04 00:50:37] 2026-02-03 23:47:03,431 | INFO     | . stage-in = 0 s
[2026-02-04 00:50:37] 2026-02-03 23:47:03,431 | INFO     | . payload execution = 8590 s
[2026-02-04 00:50:37] 2026-02-03 23:47:03,431 | INFO     | . stage-out = 0 s
[2026-02-04 00:50:37] 2026-02-03 23:47:03,432 | INFO     | . log creation = 0 s
[2026-02-04 00:50:37] 2026-02-03 23:47:03,432 | INFO     | ..............................
[2026-02-04 00:50:37] 2026-02-03 23:47:03,709 | INFO     | 
[2026-02-04 00:50:37] 2026-02-03 23:47:03,710 | INFO     | job summary report
[2026-02-04 00:50:37] 2026-02-03 23:47:03,710 | INFO     | --------------------------------------------------
[2026-02-04 00:50:37] 2026-02-03 23:47:03,710 | INFO     | PanDA job id: 6993746487
[2026-02-04 00:50:37] 2026-02-03 23:47:03,710 | INFO     | task id: 48318034
[2026-02-04 00:50:37] 2026-02-03 23:47:03,710 | INFO     | errors: (none)
[2026-02-04 00:50:37] 2026-02-03 23:47:03,710 | INFO     | time since job start (8616s) is within the limit (349056.0s)
[2026-02-04 00:50:37] 2026-02-03 23:47:03,710 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 00:50:37] 2026-02-03 23:47:03,711 | INFO     | pilot state: finished 
[2026-02-04 00:50:37] 2026-02-03 23:47:03,711 | INFO     | transexitcode: 0
[2026-02-04 00:50:37] 2026-02-03 23:47:03,711 | INFO     | exeerrorcode: 0
[2026-02-04 00:50:37] 2026-02-03 23:47:03,711 | INFO     | exeerrordiag: 
[2026-02-04 00:50:37] 2026-02-03 23:47:03,711 | INFO     | exitcode: 0
[2026-02-04 00:50:37] 2026-02-03 23:47:03,711 | INFO     | exitmsg: OK
[2026-02-04 00:50:37] 2026-02-03 23:47:03,711 | INFO     | cpuconsumptiontime: 32909 s
[2026-02-04 00:50:37] 2026-02-03 23:47:03,711 | INFO     | nevents: 400
[2026-02-04 00:50:37] 2026-02-03 23:47:03,711 | INFO     | neventsw: 0
[2026-02-04 00:50:37] 2026-02-03 23:47:03,711 | INFO     | pid: 3674509
[2026-02-04 00:50:37] 2026-02-03 23:47:03,711 | INFO     | pgrp: 3674509
[2026-02-04 00:50:37] 2026-02-03 23:47:03,711 | INFO     | corecount: 4
[2026-02-04 00:50:37] 2026-02-03 23:47:03,712 | INFO     | event service: False
[2026-02-04 00:50:37] 2026-02-03 23:47:03,712 | INFO     | sizes: {0: 2277985, 1: 2278247, 11: 2278275, 8602: 2306687, 8603: 2315763, 8605: 2315901}
[2026-02-04 00:50:37] 2026-02-03 23:47:03,712 | INFO     | --------------------------------------------------
[2026-02-04 00:50:37] 2026-02-03 23:47:03,712 | INFO     | 
[2026-02-04 00:50:37] 2026-02-03 23:47:03,712 | INFO     | executing command: ls -lF /scratch/boinc/var/slot92/slots/0
[2026-02-04 00:50:37] 2026-02-03 23:47:03,739 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 00:50:37] 2026-02-03 23:47:03,739 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 00:50:37] 2026-02-03 23:47:03,739 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 00:50:37] 2026-02-03 23:47:03,739 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 00:50:37] 2026-02-03 23:47:03,739 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 00:50:37] 2026-02-03 23:47:03,739 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 00:50:37] 2026-02-03 23:47:03,739 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 00:50:37] 2026-02-03 23:47:03,739 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 00:50:37] 2026-02-03 23:47:03,740 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 00:50:37] 2026-02-03 23:47:03,740 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 00:50:37] 2026-02-03 23:47:03,740 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 00:50:37] 2026-02-03 23:47:03,740 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 00:50:37] 2026-02-03 23:47:03,740 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 00:50:37] 2026-02-03 23:47:03,740 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 00:50:37] 2026-02-03 23:47:03,740 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 00:50:37] 2026-02-03 23:47:03,740 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 00:50:37] 2026-02-03 23:47:03,740 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 00:50:37] 2026-02-03 23:47:03,740 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 00:50:37] 2026-02-03 23:47:03,740 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 00:50:37] 2026-02-03 23:47:03,741 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 00:50:37] 2026-02-03 23:47:03,741 | INFO     | job 6993746487 has completed (purged errors)
[2026-02-04 00:50:37] 2026-02-03 23:47:03,741 | INFO     | overall cleanup function is called
[2026-02-04 00:50:37] 2026-02-03 23:47:04,750 | INFO     | --- collectZombieJob: --- 10, [3674509]
[2026-02-04 00:50:37] 2026-02-03 23:47:04,750 | INFO     | zombie collector waiting for pid 3674509
[2026-02-04 00:50:37] 2026-02-03 23:47:04,750 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 00:50:37] 2026-02-03 23:47:04,750 | INFO     | collected zombie processes
[2026-02-04 00:50:37] 2026-02-03 23:47:04,750 | INFO     | will attempt to kill all subprocesses of pid=3674509
[2026-02-04 00:50:37] 2026-02-03 23:47:05,468 | INFO     | process IDs to be killed: [3674509] (in reverse order)
[2026-02-04 00:50:37] 2026-02-03 23:47:05,728 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 00:50:37] 2026-02-03 23:47:05,728 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 00:50:37] 2026-02-03 23:47:05,755 | INFO     | did not find any defunct processes belonging to 3674509
[2026-02-04 00:50:37] 2026-02-03 23:47:05,778 | INFO     | did not find any defunct processes belonging to 3674509
[2026-02-04 00:50:37] 2026-02-03 23:47:05,779 | INFO     | ready for new job
[2026-02-04 00:50:37] 2026-02-03 23:47:05,779 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 00:50:37] 2026-02-03 23:47:05,781 | INFO     | **************************************
[2026-02-04 00:50:37] 2026-02-03 23:47:05,781 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 00:50:37] 2026-02-03 23:47:05,781 | INFO     | **************************************
[2026-02-04 00:50:37] 2026-02-03 23:47:05,781 | INFO     | 
[2026-02-04 00:50:37] 2026-02-03 23:47:05,790 | INFO     | architecture information:
[2026-02-04 00:50:37] 2026-02-03 23:47:05,790 | INFO     | executing command: cat /etc/os-release
[2026-02-04 00:50:37] 2026-02-03 23:47:05,813 | INFO     | cat /etc/os-release:
[2026-02-04 00:50:37] NAME="CentOS Linux"
[2026-02-04 00:50:37] VERSION="7 (Core)"
[2026-02-04 00:50:37] ID="centos"
[2026-02-04 00:50:37] ID_LIKE="rhel fedora"
[2026-02-04 00:50:37] VERSION_ID="7"
[2026-02-04 00:50:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 00:50:37] ANSI_COLOR="0;31"
[2026-02-04 00:50:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 00:50:37] HOME_URL="https://www.centos.org/"
[2026-02-04 00:50:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 00:50:37] 
[2026-02-04 00:50:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 00:50:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 00:50:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 00:50:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 00:50:37] 
[2026-02-04 00:50:37] 2026-02-03 23:47:05,813 | INFO     | **************************************
[2026-02-04 00:50:37] 2026-02-03 23:47:06,315 | INFO     | executing command: df -mP /scratch/boinc/var/slot92/slots/0
[2026-02-04 00:50:37] 2026-02-03 23:47:06,340 | INFO     | sufficient remaining disk space (3276991889408 B)
[2026-02-04 00:50:37] 2026-02-03 23:47:06,341 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 00:50:37] 2026-02-03 23:47:06,341 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 00:50:37] 2026-02-03 23:47:06,341 | INFO     | update_server=False
[2026-02-04 00:50:37] 2026-02-03 23:47:06,341 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 00:50:37] 2026-02-03 23:47:06,357 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 00:50:37] 2026-02-03 23:47:06,357 | INFO     | aborting loop
[2026-02-04 00:50:37] 2026-02-03 23:47:06,785 | INFO     | all data control threads have been joined
[2026-02-04 00:50:37] 2026-02-03 23:47:06,878 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 00:50:37] 2026-02-03 23:47:07,069 | INFO     | all payload control threads have been joined
[2026-02-04 00:50:37] 2026-02-03 23:47:07,194 | INFO     | all job control threads have been joined
[2026-02-04 00:50:37] 2026-02-03 23:47:07,346 | INFO     | [job] retrieve thread has finished
[2026-02-04 00:50:37] 2026-02-03 23:47:07,363 | INFO     | [job] job monitor thread has finished
[2026-02-04 00:50:37] 2026-02-03 23:47:07,428 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 00:50:37] 2026-02-03 23:47:07,453 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 00:50:37] 2026-02-03 23:47:07,790 | INFO     | [data] control thread has finished
[2026-02-04 00:50:37] 2026-02-03 23:47:07,864 | INFO     | [job] validate thread has finished
[2026-02-04 00:50:37] 2026-02-03 23:47:07,904 | INFO     | [payload] validate_post thread has finished
[2026-02-04 00:50:37] 2026-02-03 23:47:07,938 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 00:50:37] 2026-02-03 23:47:08,074 | INFO     | [payload] control thread has finished
[2026-02-04 00:50:37] 2026-02-03 23:47:08,199 | INFO     | [job] control thread has finished
[2026-02-04 00:50:37] 2026-02-03 23:47:08,452 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 00:50:37] 2026-02-03 23:47:08,495 | INFO     | [data] copytool_in thread has finished
[2026-02-04 00:50:37] 2026-02-03 23:47:08,519 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 00:50:37] 2026-02-03 23:47:08,686 | INFO     | [payload] failed_post thread has finished
[2026-02-04 00:50:37] 2026-02-03 23:47:08,883 | INFO     | [data] copytool_out thread has finished
[2026-02-04 00:50:37] 2026-02-03 23:47:09,524 | INFO     | [job] queue monitor thread has finished
[2026-02-04 00:50:37] 2026-02-03 23:47:11,459 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 00:50:37] 2026-02-03 23:47:17,024 | INFO     | job.realtimelogging is not enabled
[2026-02-04 00:50:37] 2026-02-03 23:47:18,029 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 00:50:37] 2026-02-03 23:47:37,603 | INFO     | PID=3659184 has CPU usage=10.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-04 00:50:37] 2026-02-03 23:47:37,603 | INFO     | .. there are 18 such processes running
[2026-02-04 00:50:37] 2026-02-03 23:47:37,603 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 00:50:37] 2026-02-03 23:47:37,603 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 00:50:37] 2026-02-03 23:47:37,604 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 00:50:37] 2026-02-03 23:47:40,424 | INFO     | [monitor] cgroup control has ended
[2026-02-04 00:50:37] 2026-02-03 23:47:41,547 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22899952486208)>', '<ExcThread(monitor, started 22899705771776)>']
[2026-02-04 00:50:37] 2026-02-03 23:47:41,624 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 00:50:37] 2026-02-03 23:47:41,624 | INFO     | [monitor] control thread has ended
[2026-02-04 00:50:37] 2026-02-03 23:47:46,572 | INFO     | all workflow threads have been joined
[2026-02-04 00:50:37] 2026-02-03 23:47:46,572 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 00:50:37] 2026-02-03 23:47:46,572 | INFO     | traces error code: 0
[2026-02-04 00:50:37] 2026-02-03 23:47:46,572 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 00:50:37] 2026-02-03 23:47:46,703 [wrapper] ==== pilot stdout END ====
[2026-02-04 00:50:37] 2026-02-03 23:47:46,707 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 00:50:37] 2026-02-03 23:47:46,711 [wrapper] pilotpid: 3659184
[2026-02-04 00:50:37] 2026-02-03 23:47:46,715 [wrapper] Pilot exit status: 0
[2026-02-04 00:50:37] 2026-02-03 23:47:46,731 [wrapper] pandaids: 6993746487
[2026-02-04 00:50:37] 2026-02-03 23:47:46,881 [wrapper] cleanup supervisor_pilot 3982649 3659185
[2026-02-04 00:50:37] 2026-02-03 23:47:46,885 [wrapper] Test setup, not cleaning
[2026-02-04 00:50:37] 2026-02-03 23:47:46,889 [wrapper] apfmon messages muted
[2026-02-04 00:50:37] 2026-02-03 23:47:46,893 [wrapper] ==== wrapper stdout END ====
[2026-02-04 00:50:37] 2026-02-03 23:47:46,899 [wrapper] ==== wrapper stderr END ====
[2026-02-04 00:50:37]  *** Error codes and diagnostics ***
[2026-02-04 00:50:37]     "exeErrorCode": 0,
[2026-02-04 00:50:37]     "exeErrorDiag": "",
[2026-02-04 00:50:37]     "pilotErrorCode": 0,
[2026-02-04 00:50:37]     "pilotErrorDiag": "",
[2026-02-04 00:50:37]  *** Listing of results directory ***
[2026-02-04 00:50:37] total 669500
[2026-02-04 00:50:37] -rw-r--r-- 1 boinc boinc    584422 Feb  3 04:09 pilot3.tar.gz
[2026-02-04 00:50:37] -rwx------ 1 boinc boinc     36322 Feb  3 04:09 runpilot2-wrapper.sh
[2026-02-04 00:50:37] -rw-r--r-- 1 boinc boinc      5111 Feb  3 04:10 queuedata.json
[2026-02-04 00:50:37] -rw-r--r-- 1 boinc boinc       100 Feb  3 22:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 00:50:37] -rwxr-xr-x 1 boinc boinc      7986 Feb  3 22:23 run_atlas
[2026-02-04 00:50:37] -rw-r--r-- 1 boinc boinc       105 Feb  3 22:23 job.xml
[2026-02-04 00:50:37] -rw-r--r-- 2 boinc boinc 492846480 Feb  3 22:23 EVNT.48318032._000147.pool.root.1
[2026-02-04 00:50:37] -rw-r--r-- 1 boinc boinc      6689 Feb  3 22:23 init_data.xml
[2026-02-04 00:50:37] -rw-r--r-- 2 boinc boinc     15845 Feb  3 22:23 start_atlas.sh
[2026-02-04 00:50:37] drwxrwx--x 2 boinc boinc      4096 Feb  3 22:23 shared
[2026-02-04 00:50:37] -rw-r--r-- 2 boinc boinc    597762 Feb  3 22:23 input.tar.gz
[2026-02-04 00:50:37] -rw-r--r-- 1 boinc boinc         0 Feb  3 22:23 boinc_lockfile
[2026-02-04 00:50:37] -rw-r--r-- 1 boinc boinc      2536 Feb  3 22:23 pandaJob.out
[2026-02-04 00:50:37] -rw------- 1 boinc boinc   1009252 Feb  3 22:23 agis_schedconf.cvmfs.json
[2026-02-04 00:50:37] -rw------- 1 boinc boinc   1511668 Feb  3 22:23 agis_ddmendpoints.agis.ALL.json
[2026-02-04 00:50:37] -rw------- 1 boinc boinc       443 Feb  3 22:23 workernode_map.json
[2026-02-04 00:50:37] drwx------ 5 boinc boinc      4096 Feb  3 22:23 pilot3
[2026-02-04 00:50:37] -rw------- 1 boinc boinc 185643685 Feb  4 00:46 HITS.48318034._006912.pool.root.1
[2026-02-04 00:50:37] -rw-r--r-- 1 boinc boinc       529 Feb  4 00:46 boinc_task_state.xml
[2026-02-04 00:50:37] -rw------- 1 boinc boinc      1031 Feb  4 00:46 memory_monitor_summary.json
[2026-02-04 00:50:37] -rw------- 1 boinc boinc    346486 Feb  4 00:47 log.48318034._006912.job.log.tgz.1
[2026-02-04 00:50:37] -rw------- 1 boinc boinc        95 Feb  4 00:47 pilot_heartbeat.json
[2026-02-04 00:50:37] -rw------- 1 boinc boinc      6355 Feb  4 00:47 heartbeat.json
[2026-02-04 00:50:37] -rw------- 1 boinc boinc      4904 Feb  4 00:47 pilotlog.txt
[2026-02-04 00:50:37] -rw------- 1 boinc boinc   1219083 Feb  4 00:47 log.48318034._006912.job.log.1
[2026-02-04 00:50:37] -rw------- 1 boinc boinc       357 Feb  4 00:47 output.list
[2026-02-04 00:50:37] -rw-r--r-- 1 boinc boinc       620 Feb  4 00:47 runtime_log
[2026-02-04 00:50:37] -rw------- 1 boinc boinc   1587200 Feb  4 00:47 result.tar.gz
[2026-02-04 00:50:37] -rw-r--r-- 1 boinc boinc      9204 Feb  4 00:47 runtime_log.err
[2026-02-04 00:50:37] -rw------- 1 boinc boinc       662 Feb  4 00:47 XiZLDmfyL78n9Rq4apOajLDm4fhM0noT9bVooX4SDmmjTKDmiIgcwn.diag
[2026-02-04 00:50:37] -rw-r--r-- 1 boinc boinc        26 Feb  4 00:50 wrapper_checkpoint.txt
[2026-02-04 00:50:37] -rw-r--r-- 1 boinc boinc      8192 Feb  4 00:50 boinc_mmap_file
[2026-02-04 00:50:37] -rw-r--r-- 1 boinc boinc     21118 Feb  4 00:50 stderr.txt
[2026-02-04 00:50:37] HITS file was successfully produced:
[2026-02-04 00:50:37] -rw------- 1 boinc boinc 185643685 Feb  4 00:46 shared/HITS.pool.root.1
[2026-02-04 00:50:37]  *** Contents of shared directory: ***
[2026-02-04 00:50:37] total 664752
[2026-02-04 00:50:37] -rw-r--r-- 2 boinc boinc 492846480 Feb  3 22:23 ATLAS.root_0
[2026-02-04 00:50:37] -rw-r--r-- 2 boinc boinc     15845 Feb  3 22:23 start_atlas.sh
[2026-02-04 00:50:37] -rw-r--r-- 2 boinc boinc    597762 Feb  3 22:23 input.tar.gz
[2026-02-04 00:50:37] -rw------- 1 boinc boinc 185643685 Feb  4 00:46 HITS.pool.root.1
[2026-02-04 00:50:37] -rw------- 1 boinc boinc   1587200 Feb  4 00:47 result.tar.gz
00:50:38 (3647231): run_atlas exited; CPU time 33387.007853
00:50:38 (3647231): called boinc_finish(0)

</stderr_txt>
]]>

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