Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-03 01:38:28 (56774): vboxwrapper version 26210
2026-02-03 01:38:28 (56774): BOINC client version: 8.2.8
2026-02-03 01:38:28 (56774): Detected: VirtualBox VboxManage Interface (Version: 6.1.50)
2026-02-03 01:38:28 (56774): Detected: Sandbox Configuration Enabled
2026-02-03 01:38:28 (56774): Successfully copied 'init_data.xml' to the shared directory.
2026-02-03 01:38:28 (56774): Create VM. (boinc_f52a45a4daa3e0a0, slot#1)
2026-02-03 01:38:29 (56774): Setting Memory Size for VM. (4400MB)
2026-02-03 01:38:29 (56774): Setting CPU Count for VM. (4)
2026-02-03 01:38:29 (56774): Setting Chipset Options for VM.
2026-02-03 01:38:29 (56774): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-03 01:38:29 (56774): Setting Boot Options for VM.
2026-02-03 01:38:29 (56774): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-03 01:38:29 (56774): Enabling VM Network Access.
2026-02-03 01:38:30 (56774): Disabling USB Support for VM.
2026-02-03 01:38:30 (56774): Disabling COM Port Support for VM.
2026-02-03 01:38:30 (56774): Disabling Audio Support for VM.
2026-02-03 01:38:30 (56774): Disabling Clipboard Support for VM.
2026-02-03 01:38:30 (56774): Disabling Drag and Drop Support for VM.
2026-02-03 01:38:30 (56774): Adding storage controller(s) to VM.
2026-02-03 01:38:30 (56774): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-03 01:38:30 (56774): Adding VirtualBox Guest Additions to VM.
2026-02-03 01:38:31 (56774): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-03 01:38:31 (56774): forwarding host port 58594 to guest port 80
2026-02-03 01:38:31 (56774): Enabling remote desktop for VM.
2026-02-03 01:38:31 (56774): Required extension pack not installed, remote desktop not enabled.
2026-02-03 01:38:31 (56774): Enabling shared directory for VM.
2026-02-03 01:38:31 (56774): Starting VM using VBoxManage interface. (boinc_f52a45a4daa3e0a0, slot#1)
2026-02-03 01:38:33 (56774): Successfully started VM. (PID = '56834')
2026-02-03 01:38:33 (56774): Reporting VM Process ID to BOINC.
2026-02-03 01:38:33 (56774): Guest Log: BIOS: VirtualBox 6.1.50
2026-02-03 01:38:33 (56774): Guest Log: CPUID EDX: 0x178bfbff
2026-02-03 01:38:33 (56774): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-03 01:38:33 (56774): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-03 01:38:33 (56774): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-03 01:38:33 (56774): Detected: Web Application Enabled (http://localhost:58594)
2026-02-03 01:38:33 (56774): Preference change detected
2026-02-03 01:38:33 (56774): Setting CPU throttle for VM. (100%)
2026-02-03 01:38:33 (56774): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-03 01:38:35 (56774): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-03 01:38:35 (56774): Guest Log: BIOS: Booting from Hard Disk...
2026-02-03 01:38:38 (56774): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-03 01:38:38 (56774): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-03 01:38:38 (56774): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-03 01:38:38 (56774): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-03 01:38:38 (56774): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-03 01:38:38 (56774): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-03 01:38:38 (56774): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-03 01:38:38 (56774): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-03 01:38:38 (56774): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-03 01:38:38 (56774): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-03 01:38:38 (56774): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-03 01:38:38 (56774): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-03 01:38:38 (56774): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-03 01:38:38 (56774): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-03 01:38:38 (56774): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-03 01:38:38 (56774): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-03 01:38:38 (56774): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-03 01:38:38 (56774): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-03 01:38:38 (56774): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-03 01:38:38 (56774): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-03 01:38:38 (56774): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-03 01:38:38 (56774): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-03 01:38:38 (56774): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-03 01:38:38 (56774): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-03 01:38:38 (56774): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-03 01:38:38 (56774): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-03 01:38:38 (56774): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-03 01:38:38 (56774): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-03 01:38:38 (56774): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-03 01:38:38 (56774): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-03 01:38:38 (56774): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-03 01:38:38 (56774): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-03 01:38:50 (56774): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-03 01:38:50 (56774): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2026-02-03 01:39:13 (56774): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-03 01:39:13 (56774): Guest Log: 00:00:00.000197 main     Log opened 2026-02-03T06:39:12.392107000Z
2026-02-03 01:39:13 (56774): Guest Log: 00:00:00.000379 main     OS Product: Linux
2026-02-03 01:39:13 (56774): Guest Log: 00:00:00.000448 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-03 01:39:13 (56774): Guest Log: 00:00:00.000507 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-03 01:39:13 (56774): Guest Log: 00:00:00.000564 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-03 01:39:13 (56774): Guest Log: 00:00:00.000565 main     Process ID: 1327
2026-02-03 01:39:13 (56774): Guest Log: 00:00:00.000566 main     Package type: LINUX_64BITS_GENERIC
2026-02-03 01:39:13 (56774): Guest Log: 00:00:00.002910 main     5.2.32 r132073 started. Verbose level = 0
2026-02-03 01:39:14 (56774): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-03 01:39:14 (56774): Guest Log: [INFO] Mounting shared directory
2026-02-03 01:39:14 (56774): Guest Log: [INFO] Checking for init_data.xml
2026-02-03 01:39:20 (56774): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-03 01:39:20 (56774): Guest Log: [INFO] Detected branch: prod
2026-02-03 01:39:21 (56774): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-03 01:39:21 (56774): Guest Log: Copying input files
2026-02-03 01:39:49 (56774): Guest Log: Copied input files into RunAtlas.
2026-02-03 01:39:49 (56774): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-03 01:39:49 (56774): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-03 01:39:49 (56774): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-03 01:39:49 (56774): Guest Log: Further information can be found at the LHC@home message board.
2026-02-03 01:39:58 (56774): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-03 01:39:58 (56774): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-03 01:39:58 (56774): Guest Log: 2.6.3.0 1603 0 32180 155820 4 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-02-03 01:40:03 (56774): Guest Log: copied the webapp to /var/www
2026-02-03 01:40:03 (56774): Guest Log: ATHENA_PROC_NUMBER=4
2026-02-03 01:40:03 (56774): Guest Log: ATHENA_CORE_NUMBER=4
2026-02-03 01:40:03 (56774): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-03 01:40:03 (56774): Guest Log:  *** Starting ATLAS job. (PandaID=6993745728 taskID=48318034) ***
2026-02-03 03:18:33 (56774): Status Report: Elapsed Time: '6000.000000'
2026-02-03 03:18:33 (56774): Status Report: CPU Time: '20735.890000'
2026-02-03 04:58:33 (56774): Status Report: Elapsed Time: '12000.000000'
2026-02-03 04:58:33 (56774): Status Report: CPU Time: '43211.700000'
2026-02-03 06:38:33 (56774): Status Report: Elapsed Time: '18000.000000'
2026-02-03 06:38:33 (56774): Status Report: CPU Time: '65656.800000'
2026-02-03 08:18:33 (56774): Status Report: Elapsed Time: '24000.000000'
2026-02-03 08:18:33 (56774): Status Report: CPU Time: '88151.900000'
2026-02-03 08:49:40 (56774): Preference change detected
2026-02-03 08:49:40 (56774): Setting CPU throttle for VM. (100%)
2026-02-03 08:49:41 (56774): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 180 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-03 09:47:45 (56774): Guest Log:  *** Job finished ***
2026-02-03 09:47:45 (56774): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-03 09:47:45 (56774): Guest Log: 2026-02-03 14:47:10,590 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-02-03 09:47:45 (56774): Guest Log: 2026-02-03 14:47:10,590 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-03 09:47:45 (56774): Guest Log: 2026-02-03 14:47:32,289 | INFO     | [monitor] cgroup control has ended
2026-02-03 09:47:45 (56774): Guest Log: 2026-02-03 14:47:33,123 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139880874055488)>', '<ExcThread(monitor, started 139880273262336)>']
2026-02-03 09:47:45 (56774): Guest Log: 2026-02-03 14:47:33,932 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-03 09:47:45 (56774): Guest Log: 2026-02-03 14:47:33,932 | INFO     | [monitor] control thread has ended
2026-02-03 09:47:45 (56774): Guest Log: 2026-02-03 14:47:38,139 | INFO     | all workflow threads have been joined
2026-02-03 09:47:45 (56774): Guest Log: 2026-02-03 14:47:38,139 | INFO     | end of generic workflow (traces error code: 0)
2026-02-03 09:47:45 (56774): Guest Log: 2026-02-03 14:47:38,140 | INFO     | traces error code: 0
2026-02-03 09:47:45 (56774): Guest Log: 2026-02-03 14:47:38,140 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-03 09:47:45 (56774): Guest Log: 2026-02-03 14:47:38,427 [wrapper] ==== pilot stdout END ====
2026-02-03 09:47:45 (56774): Guest Log: 2026-02-03 14:47:38,435 [wrapper] ==== wrapper stdout RESUME ====
2026-02-03 09:47:45 (56774): Guest Log: 2026-02-03 14:47:38,441 [wrapper] pilotpid: 5989
2026-02-03 09:47:45 (56774): Guest Log: 2026-02-03 14:47:38,448 [wrapper] Pilot exit status: 0
2026-02-03 09:47:45 (56774): Guest Log: 2026-02-03 14:47:39,439 [wrapper] pandaids: 6993745728
2026-02-03 09:47:45 (56774): Guest Log: 2026-02-03 14:47:39,478 [wrapper] cleanup supervisor_pilot   516 5990
2026-02-03 09:47:45 (56774): Guest Log: 2026-02-03 14:47:39,488 [wrapper] Test setup, not cleaning
2026-02-03 09:47:45 (56774): Guest Log: 2026-02-03 14:47:39,495 [wrapper] apfmon messages muted
2026-02-03 09:47:45 (56774): Guest Log: 2026-02-03 14:47:39,502 [wrapper] ==== wrapper stdout END ====
2026-02-03 09:47:45 (56774): Guest Log: 2026-02-03 14:47:39,509 [wrapper] ==== wrapper stderr END ====
2026-02-03 09:47:45 (56774): Guest Log:  *** Error codes and diagnostics ***
2026-02-03 09:47:45 (56774): Guest Log:     "exeErrorCode": 0,
2026-02-03 09:47:45 (56774): Guest Log:     "exeErrorDiag": "",
2026-02-03 09:47:45 (56774): Guest Log:     "pilotErrorCode": 0,
2026-02-03 09:47:45 (56774): Guest Log:     "pilotErrorDiag": "",
2026-02-03 09:47:45 (56774): Guest Log:  *** Listing of results directory ***
2026-02-03 09:47:45 (56774): Guest Log: total 193168
2026-02-03 09:47:45 (56774): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Feb  3 03:09 pilot3.tar.gz
2026-02-03 09:47:45 (56774): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Feb  3 03:09 queuedata.json
2026-02-03 09:47:45 (56774): Guest Log: -rwx------. 1 atlas atlas     36322 Feb  3 03:09 runpilot2-wrapper.sh
2026-02-03 09:47:45 (56774): Guest Log: -rw-r-----. 1 atlas atlas     15845 Feb  3 06:39 start_atlas.sh
2026-02-03 09:47:45 (56774): Guest Log: -rw-r-----. 1 atlas atlas    597763 Feb  3 06:39 input.tar.gz
2026-02-03 09:47:45 (56774): Guest Log: -rw-r--r--. 1 atlas atlas      5615 Feb  3 06:39 init_data.xml
2026-02-03 09:47:45 (56774): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb  3 06:39 EVNT.48318032._000140.pool.root.1 -> /data/./ATLAS.root_0
2026-02-03 09:47:45 (56774): Guest Log: -rw-r--r--. 1 atlas atlas      2535 Feb  3 06:40 pandaJob.out
2026-02-03 09:47:45 (56774): Guest Log: -rw-------. 1 atlas atlas   1009324 Feb  3 06:40 agis_schedconf.cvmfs.json
2026-02-03 09:47:45 (56774): Guest Log: -rw-------. 1 atlas atlas       427 Feb  3 06:40 workernode_map.json
2026-02-03 09:47:45 (56774): Guest Log: drwx------. 5 atlas atlas      4096 Feb  3 06:41 pilot3
2026-02-03 09:47:45 (56774): Guest Log: -rw-------. 1 atlas atlas 184758455 Feb  3 14:45 HITS.48318034._006592.pool.root.1
2026-02-03 09:47:45 (56774): Guest Log: -rw-------. 1 atlas atlas        95 Feb  3 14:46 pilot_heartbeat.json
2026-02-03 09:47:45 (56774): Guest Log: -rw-------. 1 atlas atlas      1030 Feb  3 14:46 memory_monitor_summary.json
2026-02-03 09:47:45 (56774): Guest Log: -rw-------. 1 atlas atlas   1511668 Feb  3 14:46 agis_ddmendpoints.agis.ALL.json
2026-02-03 09:47:45 (56774): Guest Log: -rw-------. 1 atlas atlas    601355 Feb  3 14:46 log.48318034._006592.job.log.tgz.1
2026-02-03 09:47:45 (56774): Guest Log: -rw-------. 1 atlas atlas      6368 Feb  3 14:46 heartbeat.json
2026-02-03 09:47:45 (56774): Guest Log: -rw-------. 1 atlas atlas      4801 Feb  3 14:47 pilotlog.txt
2026-02-03 09:47:45 (56774): Guest Log: -rw-------. 1 atlas atlas   3987313 Feb  3 14:47 log.48318034._006592.job.log.1
2026-02-03 09:47:45 (56774): Guest Log: -rw-------. 1 atlas atlas       357 Feb  3 14:47 output.list
2026-02-03 09:47:45 (56774): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb  3 14:47 runtime_log
2026-02-03 09:47:45 (56774): Guest Log: -rw-------. 1 atlas atlas   4608000 Feb  3 14:47 result.tar.gz
2026-02-03 09:47:45 (56774): Guest Log: -rw-r--r--. 1 atlas atlas      8824 Feb  3 14:47 runtime_log.err
2026-02-03 09:47:45 (56774): Guest Log: -rw-------. 1 atlas atlas       684 Feb  3 14:47 OxBLDmRyL78n9Rq4apOajLDm4fhM0noT9bVooX4SDmJhTKDm4PegLo.diag
2026-02-03 09:47:45 (56774): Guest Log: Looking for outputfile HITS.48318034._006592.pool.root.1
2026-02-03 09:47:45 (56774): Guest Log: HITS file was successfully produced
2026-02-03 09:47:45 (56774): Guest Log: -rw-------. 1 atlas atlas 184758455 Feb  3 14:45 /home/atlas/RunAtlas/HITS.48318034._006592.pool.root.1
2026-02-03 09:47:45 (56774): Guest Log: Successfully finished the ATLAS job!
2026-02-03 09:47:45 (56774): Guest Log: Copying the results back to the shared directory!
2026-02-03 09:47:45 (56774): Guest Log:  *** Contents of shared directory: ***
2026-02-03 09:47:45 (56774): Guest Log: total 493292
2026-02-03 09:47:45 (56774): Guest Log: -rw-rw----. 1 root root 498850388 Feb  3 06:38 ATLAS.root_0
2026-02-03 09:47:45 (56774): Guest Log: -rw-rw-r--. 1 root root      5615 Feb  3 06:38 init_data.xml
2026-02-03 09:47:45 (56774): Guest Log: -rw-rw----. 1 root root    597763 Feb  3 06:38 input.tar.gz
2026-02-03 09:47:45 (56774): Guest Log: -rw-r--r--. 1 root root   4608000 Feb  3 14:47 result.tar.gz
2026-02-03 09:47:45 (56774): Guest Log: -rw-rw----. 1 root root     15845 Feb  3 06:38 start_atlas.sh
2026-02-03 09:47:45 (56774): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-03 09:47:45 (56774): VM Completion File Detected.
2026-02-03 09:47:45 (56774): Powering off VM.
2026-02-03 09:47:48 (56774): Successfully stopped VM.
2026-02-03 09:47:48 (56774): Deregistering VM. (boinc_f52a45a4daa3e0a0, slot#1)
2026-02-03 09:47:48 (56774): Removing network bandwidth throttle group from VM.
2026-02-03 09:47:48 (56774): Removing VM from VirtualBox.
2026-02-03 09:47:53 (56774): called boinc_finish(0)

</stderr_txt>
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