Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
02:09:43 (816803): wrapper (7.7.26015): starting
02:09:43 (816803): wrapper: running run_atlas (--nthreads 4)
[2026-02-04 02:09:43] Arguments: --nthreads 4
[2026-02-04 02:09:43] Threads: 4
[2026-02-04 02:09:43] Checking for CVMFS
[2026-02-04 02:09:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-04 02:09:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-04 02:09:44] Running cvmfs_config stat atlas.cern.ch
[2026-02-04 02:09:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-04 02:09:44] 2.9.2.0 3251459 9144 101152 155849 1 50 23580193 36864000 0 130560 0 4358520 99.986 315573 9077 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-04 02:09:44] CVMFS is ok
[2026-02-04 02:09:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-04 02:09:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-04 02:09:44] Further information can be found at the LHC@home message board.
[2026-02-04 02:09:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 02:09:44] Checking for apptainer binary...
[2026-02-04 02:09:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-04 02:09:44] Running /usr/bin/apptainer --version
[2026-02-04 02:09:44] apptainer version 1.4.1-1.1
[2026-02-04 02:09:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 02:09:44] thA314
[2026-02-04 02:09:44] apptainer works
[2026-02-04 02:09:44] Set ATHENA_PROC_NUMBER=4
[2026-02-04 02:09:44] Set ATHENA_CORE_NUMBER=4
[2026-02-04 02:09:44] Starting ATLAS job with PandaID=6993747737
[2026-02-04 02:09:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 02:17:04]  *** The last 200 lines of the pilot log: ***
[2026-02-04 02:17:04] 2026-02-04 01:16:31,946 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-04 02:17:04] 2026-02-04 01:16:31,947 | WARNING  | wrong length of table data, x=[1770167416.0, 1770167477.0, 1770167538.0, 1770167599.0, 1770167660.0], y=[1542.0, 1324354.0, 1449535.0, 2404107.0, 2377930.0] (must 
[2026-02-04 02:17:04] 2026-02-04 01:16:31,947 | INFO     | could have reported an average CPU frequency of 3589 MHz (4 samples)
[2026-02-04 02:17:04] 2026-02-04 01:16:31,947 | INFO     | ..............................
[2026-02-04 02:17:04] 2026-02-04 01:16:31,947 | INFO     | . Timing measurements:
[2026-02-04 02:17:04] 2026-02-04 01:16:31,947 | INFO     | . get job = 0 s
[2026-02-04 02:17:04] 2026-02-04 01:16:31,947 | INFO     | . initial setup = 4 s
[2026-02-04 02:17:04] 2026-02-04 01:16:31,947 | INFO     | . payload setup = 4 s
[2026-02-04 02:17:04] 2026-02-04 01:16:31,947 | INFO     | . stage-in = 0 s
[2026-02-04 02:17:04] 2026-02-04 01:16:31,947 | INFO     | . payload execution = 256 s
[2026-02-04 02:17:04] 2026-02-04 01:16:31,947 | INFO     | . stage-out = 0 s
[2026-02-04 02:17:04] 2026-02-04 01:16:31,947 | INFO     | . log creation = 0 s
[2026-02-04 02:17:04] 2026-02-04 01:16:31,947 | INFO     | ..............................
[2026-02-04 02:17:04] 2026-02-04 01:16:31,947 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-04 02:17:04] 2026-02-04 01:16:31,947 | INFO     | executing command: tail -n 20 /local/data/boinc/slots/0/PanDA_Pilot-6993747737/pilotlog.txt
[2026-02-04 02:17:04] 2026-02-04 01:16:31,971 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-04 02:17:04] - Log from pilotlog.txt -
[2026-02-04 02:17:04] 2026-02-04 01:16:31,946 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6993747737/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 02:17:04] 2026-02-04 01:16:31,946 | INFO     | extracted standard info from prmon json
[2026-02-04 02:17:04] 2026-02-04 01:16:31,946 | INFO     | extracted standard memory fields from prmon json
[2026-02-04 02:17:04] 2026-02-04 01:16:31,946 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-04 02:17:04] 2026-02-04 01:16:31,946 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-04 02:17:04] 2026-02-04 01:16:31,946 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-04 02:17:04] 2026-02-04 01:16:31,947 | WARNING  | wrong length of table data, x=[1770167416.0, 1770167477.0, 1770167538.0, 1770167599.0, 1770167660.0], y=[1542.0, 1324354.0, 1449535.0, 2404107.0, 2377930.0] (must 
[2026-02-04 02:17:04] 2026-02-04 01:16:31,947 | INFO     | could have reported an average CPU frequency of 3589 MHz (4 samples)
[2026-02-04 02:17:04] 2026-02-04 01:16:31,947 | INFO     | ..............................
[2026-02-04 02:17:04] 2026-02-04 01:16:31,947 | INFO     | . Timing measurements:
[2026-02-04 02:17:04] 2026-02-04 01:16:31,947 | INFO     | . get job = 0 s
[2026-02-04 02:17:04] 2026-02-04 01:16:31,947 | INFO     | . initial setup = 4 s
[2026-02-04 02:17:04] 2026-02-04 01:16:31,947 | INFO     | . payload setup = 4 s
[2026-02-04 02:17:04] 2026-02-04 01:16:31,947 | INFO     | . stage-in = 0 s
[2026-02-04 02:17:04] 2026-02-04 01:16:31,947 | INFO     | . payload execution = 256 s
[2026-02-04 02:17:04] 2026-02-04 01:16:31,947 | INFO     | . stage-out = 0 s
[2026-02-04 02:17:04] 2026-02-04 01:16:31,947 | INFO     | . log creation = 0 s
[2026-02-04 02:17:04] 2026-02-04 01:16:31,947 | INFO     | ..............................
[2026-02-04 02:17:04] 2026-02-04 01:16:31,947 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-04 02:17:04] 2026-02-04 01:16:31,947 | INFO     | executing command: tail -n 20 /local/data/boinc/slots/0/PanDA_Pilot-6993747737/pilotlog.txt
[2026-02-04 02:17:04] 2026-02-04 01:16:31,971 | WARNING  | 
[2026-02-04 02:17:04] [begin log extracts]
[2026-02-04 02:17:04] - Log from pilotlog.txt -
[2026-02-04 02:17:04] 2026-02-04 01:16:31,946 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6993747737/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 02:17:04] 2026-02-04 01:16:31,946 | INFO     | extracted standard info from prmon json
[2026-02-04 02:17:04] 2026-02-04 01:16:31,946 | INFO     | extracted standard memory fields from prmon json
[2026-02-04 02:17:04] 2026-02-04 01:16:31,946 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-04 02:17:04] 2026-02-04 01:16:31,946 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-04 02:17:04] 2026-02-04 01:16:31,946 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-04 02:17:04] 2026-02-04 01:16:31,947 | WARNING  | wrong length of table data, x=[1770167416.0, 1770167477.0, 1770167538.0, 1770167599.0, 1770167660.0], y=[1542.0, 1324354.0, 1449535.0, 2404107.0, 2377930.0] (must 
[2026-02-04 02:17:04] 2026-02-04 01:16:31,947 | INFO     | could have reported an average CPU frequency of 3589 MHz (4 samples)
[2026-02-04 02:17:04] 2026-02-04 01:16:31,947 | INFO     | ..............................
[2026-02-04 02:17:04] 2026-02-04 01:16:31,947 | INFO     | . Timing measurements:
[2026-02-04 02:17:04] 2026-02-04 01:16:31,947 | INFO     | . get job = 0 s
[2026-02-04 02:17:04] 2026-02-04 01:16:31,947 | INFO     | . initial setup = 4 s
[2026-02-04 02:17:04] 2026-02-04 01:16:31,947 | INFO     | . payload setup = 4 s
[2026-02-04 02:17:04] 2026-02-04 01:16:31,947 | INFO     | . stage-in = 0 s
[2026-02-04 02:17:04] 2026-02-04 01:16:31,947 | INFO     | . payload execution = 256 s
[2026-02-04 02:17:04] 2026-02-04 01:16:31,947 | INFO     | . stage-out = 0 s
[2026-02-04 02:17:04] 2026-02-04 01:16:31,947 | INFO     | . log creation = 0 s
[2026-02-04 02:17:04] 2026-02-04 01:16:31,947 | INFO     | ..............................
[2026-02-04 02:17:04] 2026-02-04 01:16:31,947 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-04 02:17:04] 2026-02-04 01:16:31,947 | INFO     | executing command: tail -n 20 /local/data/boinc/slots/0/PanDA_Pilot-6993747737/pilotlog.txt
[2026-02-04 02:17:04] [end log extracts]
[2026-02-04 02:17:04] 2026-02-04 01:16:31,971 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-04 02:17:04] 2026-02-04 01:16:31,971 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a 
[2026-02-04 02:17:04] 2026-02-04 01:16:32,010 | INFO     | time since job start (395s) is within the limit (349056.0s)
[2026-02-04 02:17:04] 2026-02-04 01:16:32,011 | INFO     | 
[2026-02-04 02:17:04] 2026-02-04 01:16:32,012 | INFO     | job summary report
[2026-02-04 02:17:04] 2026-02-04 01:16:32,012 | INFO     | --------------------------------------------------
[2026-02-04 02:17:04] 2026-02-04 01:16:32,012 | INFO     | PanDA job id: 6993747737
[2026-02-04 02:17:04] 2026-02-04 01:16:32,012 | INFO     | task id: 48329469
[2026-02-04 02:17:04] 2026-02-04 01:16:32,012 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-04 01:14:25,341 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-04 02:17:04] 2026-02-04 01:16:32,012 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 02:17:04] 2026-02-04 01:16:32,012 | INFO     | pilot state: failed 
[2026-02-04 02:17:04] 2026-02-04 01:16:32,012 | INFO     | transexitcode: 65
[2026-02-04 02:17:04] 2026-02-04 01:16:32,012 | INFO     | exeerrorcode: 65
[2026-02-04 02:17:04] 2026-02-04 01:16:32,012 | INFO     | exeerrordiag: EVNTtoHITS got a SIGHUP signal (exit code 129); Logfile error in log.EVNTtoHITS: "CoreDumpSvc   FATAL Caught fatal signal. Printing details to stdout
[2026-02-04 02:17:04] 2026-02-04 01:16:32,012 | INFO     | exitcode: 65
[2026-02-04 02:17:04] 2026-02-04 01:16:32,012 | INFO     | exitmsg: EVNTtoHITS got a SIGHUP signal (exit code 129); Logfile error in log.EVNTtoHITS: "CoreDumpSvc   FATAL Caught fatal signal. Printing details to stdout."; P
[2026-02-04 02:17:04] 2026-02-04 01:16:32,012 | INFO     | cpuconsumptiontime: 146 s
[2026-02-04 02:17:04] 2026-02-04 01:16:32,012 | INFO     | nevents: 0
[2026-02-04 02:17:04] 2026-02-04 01:16:32,012 | INFO     | neventsw: 0
[2026-02-04 02:17:04] 2026-02-04 01:16:32,012 | INFO     | pid: 825432
[2026-02-04 02:17:04] 2026-02-04 01:16:32,012 | INFO     | pgrp: 825432
[2026-02-04 02:17:04] 2026-02-04 01:16:32,012 | INFO     | corecount: 4
[2026-02-04 02:17:04] 2026-02-04 01:16:32,012 | INFO     | event service: False
[2026-02-04 02:17:04] 2026-02-04 01:16:32,012 | INFO     | sizes: {0: 2278292, 11: 2278292, 264: 2304864, 265: 2309222, 266: 2309222, 384: 2309416}
[2026-02-04 02:17:04] 2026-02-04 01:16:32,012 | INFO     | --------------------------------------------------
[2026-02-04 02:17:04] 2026-02-04 01:16:32,012 | INFO     | 
[2026-02-04 02:17:04] 2026-02-04 01:16:32,012 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-02-04 02:17:04] 2026-02-04 01:16:32,033 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 02:17:04] 2026-02-04 01:16:32,033 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 02:17:04] 2026-02-04 01:16:32,033 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 02:17:04] 2026-02-04 01:16:32,033 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 02:17:04] 2026-02-04 01:16:32,033 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 02:17:04] 2026-02-04 01:16:32,033 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 02:17:04] 2026-02-04 01:16:32,033 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 02:17:04] 2026-02-04 01:16:32,033 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 02:17:04] 2026-02-04 01:16:32,033 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 02:17:04] 2026-02-04 01:16:32,033 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 02:17:04] 2026-02-04 01:16:32,033 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 02:17:04] 2026-02-04 01:16:32,033 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 02:17:04] 2026-02-04 01:16:32,033 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 02:17:04] 2026-02-04 01:16:32,033 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 02:17:04] 2026-02-04 01:16:32,033 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 02:17:04] 2026-02-04 01:16:32,033 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 02:17:04] 2026-02-04 01:16:32,033 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 02:17:04] 2026-02-04 01:16:32,033 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 02:17:04] 2026-02-04 01:16:32,033 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 02:17:04] 2026-02-04 01:16:32,033 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 02:17:04] 2026-02-04 01:16:32,034 | INFO     | job 6993747737 has completed (purged errors)
[2026-02-04 02:17:04] 2026-02-04 01:16:32,034 | INFO     | overall cleanup function is called
[2026-02-04 02:17:04] 2026-02-04 01:16:33,041 | INFO     | --- collectZombieJob: --- 10, [825432]
[2026-02-04 02:17:04] 2026-02-04 01:16:33,041 | INFO     | zombie collector waiting for pid 825432
[2026-02-04 02:17:04] 2026-02-04 01:16:33,041 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 02:17:04] 2026-02-04 01:16:33,041 | INFO     | collected zombie processes
[2026-02-04 02:17:04] 2026-02-04 01:16:33,041 | INFO     | will attempt to kill all subprocesses of pid=825432
[2026-02-04 02:17:04] 2026-02-04 01:16:33,089 | INFO     | process IDs to be killed: [825432] (in reverse order)
[2026-02-04 02:17:04] 2026-02-04 01:16:33,128 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 02:17:04] 2026-02-04 01:16:33,128 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 02:17:04] 2026-02-04 01:16:33,130 | INFO     | did not find any defunct processes belonging to 825432
[2026-02-04 02:17:04] 2026-02-04 01:16:33,132 | INFO     | did not find any defunct processes belonging to 825432
[2026-02-04 02:17:04] 2026-02-04 01:16:33,132 | INFO     | ready for new job
[2026-02-04 02:17:04] 2026-02-04 01:16:33,132 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 02:17:04] 2026-02-04 01:16:33,132 | INFO     | **************************************
[2026-02-04 02:17:04] 2026-02-04 01:16:33,133 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 02:17:04] 2026-02-04 01:16:33,133 | INFO     | **************************************
[2026-02-04 02:17:04] 2026-02-04 01:16:33,133 | INFO     | 
[2026-02-04 02:17:04] 2026-02-04 01:16:33,133 | INFO     | architecture information:
[2026-02-04 02:17:04] 2026-02-04 01:16:33,134 | INFO     | executing command: cat /etc/os-release
[2026-02-04 02:17:04] 2026-02-04 01:16:33,149 | INFO     | cat /etc/os-release:
[2026-02-04 02:17:04] NAME="CentOS Linux"
[2026-02-04 02:17:04] VERSION="7 (Core)"
[2026-02-04 02:17:04] ID="centos"
[2026-02-04 02:17:04] ID_LIKE="rhel fedora"
[2026-02-04 02:17:04] VERSION_ID="7"
[2026-02-04 02:17:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 02:17:04] ANSI_COLOR="0;31"
[2026-02-04 02:17:04] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 02:17:04] HOME_URL="https://www.centos.org/"
[2026-02-04 02:17:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 02:17:04] 
[2026-02-04 02:17:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 02:17:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 02:17:04] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 02:17:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 02:17:04] 
[2026-02-04 02:17:04] 2026-02-04 01:16:33,149 | INFO     | **************************************
[2026-02-04 02:17:04] 2026-02-04 01:16:33,652 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-04 02:17:04] 2026-02-04 01:16:33,669 | INFO     | sufficient remaining disk space (231672381440 B)
[2026-02-04 02:17:04] 2026-02-04 01:16:33,670 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 02:17:04] 2026-02-04 01:16:33,670 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 02:17:04] 2026-02-04 01:16:33,670 | INFO     | update_server=False
[2026-02-04 02:17:04] 2026-02-04 01:16:33,670 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 02:17:04] 2026-02-04 01:16:33,670 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 02:17:04] 2026-02-04 01:16:33,670 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-02-04 02:17:04] 2026-02-04 01:16:33,670 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 02:17:04] 2026-02-04 01:16:33,670 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 02:17:04] 2026-02-04 01:16:33,670 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 02:17:04] 2026-02-04 01:16:33,719 | INFO     | all data control threads have been joined
[2026-02-04 02:17:04] 2026-02-04 01:16:34,108 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-04 02:17:04] 2026-02-04 01:16:34,108 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-04 02:17:04] 2026-02-04 01:16:34,108 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 02:17:04] 2026-02-04 01:16:34,108 | INFO     | will abort loop
[2026-02-04 02:17:04] 2026-02-04 01:16:34,473 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 02:17:04] 2026-02-04 01:16:34,676 | INFO     | [job] queue monitor thread has finished
[2026-02-04 02:17:04] 2026-02-04 01:16:34,676 | INFO     | [job] retrieve thread has finished
[2026-02-04 02:17:04] 2026-02-04 01:16:34,725 | INFO     | [data] control thread has finished
[2026-02-04 02:17:04] 2026-02-04 01:16:34,798 | INFO     | all payload control threads have been joined
[2026-02-04 02:17:04] 2026-02-04 01:16:35,031 | INFO     | all job control threads have been joined
[2026-02-04 02:17:04] 2026-02-04 01:16:35,114 | INFO     | [job] job monitor thread has finished
[2026-02-04 02:17:04] 2026-02-04 01:16:35,206 | INFO     | [job] validate thread has finished
[2026-02-04 02:17:04] 2026-02-04 01:16:35,290 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 02:17:04] 2026-02-04 01:16:35,385 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 02:17:04] 2026-02-04 01:16:35,419 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 02:17:04] 2026-02-04 01:16:35,480 | INFO     | [payload] validate_post thread has finished
[2026-02-04 02:17:04] 2026-02-04 01:16:35,521 | INFO     | [data] copytool_in thread has finished
[2026-02-04 02:17:04] 2026-02-04 01:16:35,804 | INFO     | [payload] control thread has finished
[2026-02-04 02:17:04] 2026-02-04 01:16:35,963 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 02:17:04] 2026-02-04 01:16:36,015 | INFO     | [payload] failed_post thread has finished
[2026-02-04 02:17:04] 2026-02-04 01:16:36,036 | INFO     | [job] control thread has finished
[2026-02-04 02:17:04] 2026-02-04 01:16:36,480 | INFO     | [data] copytool_out thread has finished
[2026-02-04 02:17:04] 2026-02-04 01:16:37,131 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 02:17:04] 2026-02-04 01:16:41,137 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 02:17:04] 2026-02-04 01:16:57,324 | INFO     | [monitor] cgroup control has ended
[2026-02-04 02:17:04] 2026-02-04 01:16:59,386 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140699746547520)>', '<ExcThread(monitor, started 140698934294272)>']
[2026-02-04 02:17:04] 2026-02-04 01:16:59,809 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 02:17:04] 2026-02-04 01:16:59,809 | INFO     | [monitor] control thread has ended
[2026-02-04 02:17:04] 2026-02-04 01:17:04,412 | INFO     | all workflow threads have been joined
[2026-02-04 02:17:04] 2026-02-04 01:17:04,412 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 02:17:04] 2026-02-04 01:17:04,412 | INFO     | traces error code: 0
[2026-02-04 02:17:04] 2026-02-04 01:17:04,412 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 02:17:04] 2026-02-04 01:17:04,496 [wrapper] ==== pilot stdout END ====
[2026-02-04 02:17:04] 2026-02-04 01:17:04,500 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 02:17:04] 2026-02-04 01:17:04,504 [wrapper] pilotpid: 820914
[2026-02-04 02:17:04] 2026-02-04 01:17:04,508 [wrapper] Pilot exit status: 0
[2026-02-04 02:17:04] 2026-02-04 01:17:04,519 [wrapper] pandaids: 6993747737
[2026-02-04 02:17:04] 2026-02-04 01:17:04,543 [wrapper] cleanup supervisor_pilot  820920 820915
[2026-02-04 02:17:04] 2026-02-04 01:17:04,547 [wrapper] Test setup, not cleaning
[2026-02-04 02:17:04] 2026-02-04 01:17:04,551 [wrapper] apfmon messages muted
[2026-02-04 02:17:04] 2026-02-04 01:17:04,555 [wrapper] ==== wrapper stdout END ====
[2026-02-04 02:17:04] 2026-02-04 01:17:04,558 [wrapper] ==== wrapper stderr END ====
[2026-02-04 02:17:04]  *** Error codes and diagnostics ***
[2026-02-04 02:17:04]     "exeErrorCode": 65,
[2026-02-04 02:17:04]     "exeErrorDiag": "EVNTtoHITS got a SIGHUP signal (exit code 129); Logfile error in log.EVNTtoHITS: \"CoreDumpSvc   FATAL Caught fatal signal. Printing details to stdout.\"; Possible memory leak: 'pss' slope: 8036.67 KB/s",
[2026-02-04 02:17:04]     "pilotErrorCode": 1305,
[2026-02-04 02:17:04]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGHUP signal (exit code 129); Logfile error in log.EVNTtoHITS: \"CoreDumpSvc   FATAL Caught fatal signal. Printing details to stdout.\"; Possib",
[2026-02-04 02:17:04]  *** Listing of results directory ***
[2026-02-04 02:17:04] total 267224
[2026-02-04 02:17:04] -rw-r--r-- 1 boinc boinc    584422 Feb  3 05:59 pilot3.tar.gz
[2026-02-04 02:17:04] -rwx------ 1 boinc boinc     36322 Feb  3 06:01 runpilot2-wrapper.sh
[2026-02-04 02:17:04] -rw-r--r-- 1 boinc boinc      5111 Feb  3 06:02 queuedata.json
[2026-02-04 02:17:04] -rw-r--r-- 1 boinc boinc       100 Feb  4 02:09 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 02:17:04] -rwxr-xr-x 1 boinc boinc      7986 Feb  4 02:09 run_atlas
[2026-02-04 02:17:04] -rw-r--r-- 1 boinc boinc       105 Feb  4 02:09 job.xml
[2026-02-04 02:17:04] -rw-r--r-- 2 boinc boinc 269209041 Feb  4 02:09 EVNT.48329467._000001.pool.root.1
[2026-02-04 02:17:04] drwxrwx--x 2 boinc boinc      4096 Feb  4 02:09 shared
[2026-02-04 02:17:04] -rw-r--r-- 2 boinc boinc    597785 Feb  4 02:09 input.tar.gz
[2026-02-04 02:17:04] -rw-r--r-- 2 boinc boinc     15845 Feb  4 02:09 start_atlas.sh
[2026-02-04 02:17:04] -rw-r--r-- 1 boinc boinc         0 Feb  4 02:09 boinc_setup_complete
[2026-02-04 02:17:04] -rw-r--r-- 1 boinc boinc      6376 Feb  4 02:09 init_data.xml
[2026-02-04 02:17:04] -rw-r--r-- 1 boinc boinc         0 Feb  4 02:09 boinc_lockfile
[2026-02-04 02:17:04] -rw-r--r-- 1 boinc boinc      2611 Feb  4 02:09 pandaJob.out
[2026-02-04 02:17:04] -rw------- 1 boinc boinc   1009228 Feb  4 02:09 agis_schedconf.cvmfs.json
[2026-02-04 02:17:04] -rw------- 1 boinc boinc   1511668 Feb  4 02:09 agis_ddmendpoints.agis.ALL.json
[2026-02-04 02:17:04] -rw------- 1 boinc boinc       426 Feb  4 02:09 workernode_map.json
[2026-02-04 02:17:04] drwx------ 5 boinc boinc      4096 Feb  4 02:09 pilot3
[2026-02-04 02:17:04] -rw-r--r-- 1 boinc boinc       526 Feb  4 02:14 boinc_task_state.xml
[2026-02-04 02:17:04] -rw------- 1 boinc boinc      1002 Feb  4 02:14 memory_monitor_summary.json
[2026-02-04 02:17:04] -rw------- 1 boinc boinc    132343 Feb  4 02:14 log.48329469._000130.job.log.tgz.1
[2026-02-04 02:17:04] -rw------- 1 boinc boinc        95 Feb  4 02:15 pilot_heartbeat.json
[2026-02-04 02:17:04] -rw------- 1 boinc boinc      8076 Feb  4 02:16 heartbeat.json
[2026-02-04 02:17:04] -rw-r--r-- 1 boinc boinc      8192 Feb  4 02:16 boinc_mmap_file
[2026-02-04 02:17:04] -rw-r--r-- 1 boinc boinc        24 Feb  4 02:16 wrapper_checkpoint.txt
[2026-02-04 02:17:04] -rw------- 1 boinc boinc      4738 Feb  4 02:17 pilotlog.txt
[2026-02-04 02:17:04] -rw------- 1 boinc boinc    111729 Feb  4 02:17 log.48329469._000130.job.log.1
[2026-02-04 02:17:04] -rw------- 1 boinc boinc       188 Feb  4 02:17 output.list
[2026-02-04 02:17:04] -rw-r--r-- 1 boinc boinc       620 Feb  4 02:17 runtime_log
[2026-02-04 02:17:04] -rw------- 1 boinc boinc    266240 Feb  4 02:17 result.tar.gz
[2026-02-04 02:17:04] -rw-r--r-- 1 boinc boinc      8743 Feb  4 02:17 runtime_log.err
[2026-02-04 02:17:04] -rw------- 1 boinc boinc       650 Feb  4 02:17 ioAODmeiN78n9Rq4apOajLDm4fhM0noT9bVooX4SDmnxTKDmVEobWn.diag
[2026-02-04 02:17:04] -rw-r--r-- 1 boinc boinc     22478 Feb  4 02:17 stderr.txt
[2026-02-04 02:17:04] No HITS result produced
[2026-02-04 02:17:04]  *** Contents of shared directory: ***
[2026-02-04 02:17:04] total 263764
[2026-02-04 02:17:04] -rw-r--r-- 2 boinc boinc 269209041 Feb  4 02:09 ATLAS.root_0
[2026-02-04 02:17:04] -rw-r--r-- 2 boinc boinc    597785 Feb  4 02:09 input.tar.gz
[2026-02-04 02:17:04] -rw-r--r-- 2 boinc boinc     15845 Feb  4 02:09 start_atlas.sh
[2026-02-04 02:17:04] -rw------- 1 boinc boinc    266240 Feb  4 02:17 result.tar.gz
02:17:05 (816803): run_atlas exited; CPU time 138.831250
02:17:05 (816803): called boinc_finish(0)

</stderr_txt>
]]>

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