Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
09:54:30 (232294): wrapper (7.7.26015): starting
09:54:30 (232294): wrapper: running run_atlas (--nthreads 3)
[2026-02-03 09:54:30] Arguments: --nthreads 3
[2026-02-03 09:54:30] Threads: 3
[2026-02-03 09:54:30] Checking for CVMFS
[2026-02-03 09:54:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-03 09:54:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-03 09:54:31] Running cvmfs_config stat atlas.cern.ch
[2026-02-03 09:54:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-03 09:54:32] 2.13.3.0 158130 622 48556 155823 3 50 6521563 8388608 0 130560 0 207174 99.980 20921 833 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-02-03 09:54:32] CVMFS is ok
[2026-02-03 09:54:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-03 09:54:32] Small home clusters do not require a local http proxy but it is suggested if
[2026-02-03 09:54:32] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-02-03 09:54:32] Further information can be found at the LHC@home message board.
[2026-02-03 09:54:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 09:54:32] Checking for apptainer binary...
[2026-02-03 09:54:32] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-03 09:54:32] Running /usr/bin/apptainer --version
[2026-02-03 09:54:32] apptainer version 1.4.3
[2026-02-03 09:54:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 09:54:32] debian-e15
[2026-02-03 09:54:32] apptainer works
[2026-02-03 09:54:32] Set ATHENA_PROC_NUMBER=3
[2026-02-03 09:54:32] Set ATHENA_CORE_NUMBER=3
[2026-02-03 09:54:32] Starting ATLAS job with PandaID=6993748514
[2026-02-03 09:54:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-03 11:43:01]  *** The last 200 lines of the pilot log: ***
[2026-02-03 11:43:01] 2026-02-03 10:42:00,209 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-03 11:43:01] 2026-02-03 10:42:00,209 | INFO     | log transfer has been attempted: DONE
[2026-02-03 11:43:01] 2026-02-03 10:42:00,209 | INFO     | job 6993748514 has finished - writing final server update
[2026-02-03 11:43:01] 2026-02-03 10:42:00,209 | INFO     | total number of processed events: 400 (read)
[2026-02-03 11:43:01] 2026-02-03 10:42:00,211 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6993748514/memory_monitor_summary.json (trf name=prmon)
[2026-02-03 11:43:01] 2026-02-03 10:42:00,211 | INFO     | extracted standard info from prmon json
[2026-02-03 11:43:01] 2026-02-03 10:42:00,211 | INFO     | extracted standard memory fields from prmon json
[2026-02-03 11:43:01] 2026-02-03 10:42:00,211 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-03 11:43:01] 2026-02-03 10:42:00,211 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-03 11:43:01] 2026-02-03 10:42:00,211 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-03 11:43:01] 2026-02-03 10:42:00,212 | INFO     | fitting pss+swap vs Time
[2026-02-03 11:43:01] 2026-02-03 10:42:00,212 | INFO     | sum of square deviations: 369281342.5
[2026-02-03 11:43:01] 2026-02-03 10:42:00,212 | INFO     | sum of deviations: -18091852567.0
[2026-02-03 11:43:01] 2026-02-03 10:42:00,212 | INFO     | mean x: 1770112106.5
[2026-02-03 11:43:01] 2026-02-03 10:42:00,212 | INFO     | mean y: 2389807.0566037735
[2026-02-03 11:43:01] 2026-02-03 10:42:00,212 | INFO     | intersect: 86723822958.96248
[2026-02-03 11:43:01] 2026-02-03 10:42:00,213 | INFO     | chi2: 1.9306091984250433
[2026-02-03 11:43:01] 2026-02-03 10:42:00,213 | INFO     | sum of square deviations: 319447850.0
[2026-02-03 11:43:01] 2026-02-03 10:42:00,213 | INFO     | sum of deviations: -11059084853.0
[2026-02-03 11:43:01] 2026-02-03 10:42:00,213 | INFO     | mean x: 1770111954.0
[2026-02-03 11:43:01] 2026-02-03 10:42:00,213 | INFO     | mean y: 2410628.5346534653
[2026-02-03 11:43:01] 2026-02-03 10:42:00,213 | INFO     | intersect: 61282579828.59542
[2026-02-03 11:43:01] 2026-02-03 10:42:00,213 | INFO     | chi2: 1.283915112568415
[2026-02-03 11:43:01] 2026-02-03 10:42:00,213 | INFO     | current chi2=1.283915112568415 (change=33.496892399776705 %)
[2026-02-03 11:43:01] 2026-02-03 10:42:00,213 | INFO     | sum of square deviations: 274312120.0
[2026-02-03 11:43:01] 2026-02-03 10:42:00,213 | INFO     | sum of deviations: -10128282498.0
[2026-02-03 11:43:01] 2026-02-03 10:42:00,213 | INFO     | mean x: 1770111801.5
[2026-02-03 11:43:01] 2026-02-03 10:42:00,213 | INFO     | mean y: 2413778.5625
[2026-02-03 11:43:01] 2026-02-03 10:42:00,213 | INFO     | intersect: 65359323194.87157
[2026-02-03 11:43:01] 2026-02-03 10:42:00,214 | INFO     | chi2: 1.277894516857437
[2026-02-03 11:43:01] 2026-02-03 10:42:00,214 | INFO     | current chi2=1.277894516857437 (change=0.46892474837640025 %)
[2026-02-03 11:43:01] 2026-02-03 10:42:00,214 | INFO     | right removable region: 95
[2026-02-03 11:43:01] 2026-02-03 10:42:00,214 | INFO     | sum of square deviations: 319447850.0
[2026-02-03 11:43:01] 2026-02-03 10:42:00,214 | INFO     | sum of deviations: -23837071748.0
[2026-02-03 11:43:01] 2026-02-03 10:42:00,214 | INFO     | mean x: 1770112259.0
[2026-02-03 11:43:01] 2026-02-03 10:42:00,214 | INFO     | mean y: 2406282.504950495
[2026-02-03 11:43:01] 2026-02-03 10:42:00,214 | INFO     | intersect: 132087480324.47253
[2026-02-03 11:43:01] 2026-02-03 10:42:00,214 | INFO     | chi2: 0.8776206550249555
[2026-02-03 11:43:01] 2026-02-03 10:42:00,214 | INFO     | current chi2=0.8776206550249555 (change=54.54177594611572 %)
[2026-02-03 11:43:01] 2026-02-03 10:42:00,214 | INFO     | sum of square deviations: 274312120.0
[2026-02-03 11:43:01] 2026-02-03 10:42:00,214 | INFO     | sum of deviations: -18815625405.5
[2026-02-03 11:43:01] 2026-02-03 10:42:00,214 | INFO     | mean x: 1770112411.5
[2026-02-03 11:43:01] 2026-02-03 10:42:00,214 | INFO     | mean y: 2389289.03125
[2026-02-03 11:43:01] 2026-02-03 10:42:00,214 | INFO     | intersect: 121417994477.78584
[2026-02-03 11:43:01] 2026-02-03 10:42:00,215 | INFO     | chi2: 0.8608674678968793
[2026-02-03 11:43:01] 2026-02-03 10:42:00,215 | INFO     | current chi2=0.8608674678968793 (change=1.9089326387378363 %)
[2026-02-03 11:43:01] 2026-02-03 10:42:00,215 | INFO     | left removable region: 20
[2026-02-03 11:43:01] 2026-02-03 10:42:00,215 | INFO     | sum of square deviations: 130793150.0
[2026-02-03 11:43:01] 2026-02-03 10:42:00,215 | INFO     | sum of deviations: -2604090610.0000005
[2026-02-03 11:43:01] 2026-02-03 10:42:00,215 | INFO     | mean x: 1770112381.0
[2026-02-03 11:43:01] 2026-02-03 10:42:00,215 | INFO     | mean y: 2371558.5733333332
[2026-02-03 11:43:01] 2026-02-03 10:42:00,215 | INFO     | intersect: 35245295442.6364
[2026-02-03 11:43:01] 2026-02-03 10:42:00,215 | INFO     | chi2: 0.07355058543273225
[2026-02-03 11:43:01] 2026-02-03 10:42:00,215 | INFO     | current memory leak: -19.91 B/s (using 75 data points, chi2=0.07)
[2026-02-03 11:43:01] 2026-02-03 10:42:00,215 | INFO     | could have reported an average CPU frequency of 2167 MHz (7 samples)
[2026-02-03 11:43:01] 2026-02-03 10:42:00,215 | INFO     | ..............................
[2026-02-03 11:43:01] 2026-02-03 10:42:00,215 | INFO     | . Timing measurements:
[2026-02-03 11:43:01] 2026-02-03 10:42:00,215 | INFO     | . get job = 0 s
[2026-02-03 11:43:01] 2026-02-03 10:42:00,215 | INFO     | . initial setup = 4 s
[2026-02-03 11:43:01] 2026-02-03 10:42:00,215 | INFO     | . payload setup = 4 s
[2026-02-03 11:43:01] 2026-02-03 10:42:00,215 | INFO     | . stage-in = 0 s
[2026-02-03 11:43:01] 2026-02-03 10:42:00,215 | INFO     | . payload execution = 6410 s
[2026-02-03 11:43:01] 2026-02-03 10:42:00,215 | INFO     | . stage-out = 0 s
[2026-02-03 11:43:01] 2026-02-03 10:42:00,215 | INFO     | . log creation = 0 s
[2026-02-03 11:43:01] 2026-02-03 10:42:00,215 | INFO     | ..............................
[2026-02-03 11:43:01] 2026-02-03 10:42:00,253 | INFO     | 
[2026-02-03 11:43:01] 2026-02-03 10:42:00,254 | INFO     | job summary report
[2026-02-03 11:43:01] 2026-02-03 10:42:00,254 | INFO     | --------------------------------------------------
[2026-02-03 11:43:01] 2026-02-03 10:42:00,254 | INFO     | PanDA job id: 6993748514
[2026-02-03 11:43:01] 2026-02-03 10:42:00,254 | INFO     | task id: 48330152
[2026-02-03 11:43:01] 2026-02-03 10:42:00,254 | INFO     | errors: (none)
[2026-02-03 11:43:01] 2026-02-03 10:42:00,254 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-03 11:43:01] 2026-02-03 10:42:00,254 | INFO     | pilot state: finished 
[2026-02-03 11:43:01] 2026-02-03 10:42:00,254 | INFO     | transexitcode: 0
[2026-02-03 11:43:01] 2026-02-03 10:42:00,254 | INFO     | exeerrorcode: 0
[2026-02-03 11:43:01] 2026-02-03 10:42:00,254 | INFO     | exeerrordiag: 
[2026-02-03 11:43:01] 2026-02-03 10:42:00,254 | INFO     | exitcode: 0
[2026-02-03 11:43:01] 2026-02-03 10:42:00,254 | INFO     | exitmsg: OK
[2026-02-03 11:43:01] 2026-02-03 10:42:00,254 | INFO     | cpuconsumptiontime: 18891 s
[2026-02-03 11:43:01] 2026-02-03 10:42:00,254 | INFO     | nevents: 400
[2026-02-03 11:43:01] 2026-02-03 10:42:00,254 | INFO     | neventsw: 0
[2026-02-03 11:43:01] 2026-02-03 10:42:00,254 | INFO     | pid: 240900
[2026-02-03 11:43:01] 2026-02-03 10:42:00,254 | INFO     | pgrp: 240900
[2026-02-03 11:43:01] 2026-02-03 10:42:00,254 | INFO     | corecount: 3
[2026-02-03 11:43:01] 2026-02-03 10:42:00,254 | INFO     | event service: False
[2026-02-03 11:43:01] 2026-02-03 10:42:00,254 | INFO     | sizes: {0: 2278401, 10: 2278401, 6418: 2314618, 6422: 2314618, 6424: 2314812}
[2026-02-03 11:43:01] 2026-02-03 10:42:00,254 | INFO     | --------------------------------------------------
[2026-02-03 11:43:01] 2026-02-03 10:42:00,254 | INFO     | 
[2026-02-03 11:43:01] 2026-02-03 10:42:00,254 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2026-02-03 11:43:01] 2026-02-03 10:42:00,268 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-03 11:43:01] 2026-02-03 10:42:00,268 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-03 11:43:01] 2026-02-03 10:42:00,268 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-03 11:43:01] 2026-02-03 10:42:00,268 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-03 11:43:01] 2026-02-03 10:42:00,268 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-03 11:43:01] 2026-02-03 10:42:00,268 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-03 11:43:01] 2026-02-03 10:42:00,268 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-03 11:43:01] 2026-02-03 10:42:00,268 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-03 11:43:01] 2026-02-03 10:42:00,268 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-03 11:43:01] 2026-02-03 10:42:00,269 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-03 11:43:01] 2026-02-03 10:42:00,269 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-03 11:43:01] 2026-02-03 10:42:00,269 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-03 11:43:01] 2026-02-03 10:42:00,269 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-03 11:43:01] 2026-02-03 10:42:00,269 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-03 11:43:01] 2026-02-03 10:42:00,269 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-03 11:43:01] 2026-02-03 10:42:00,269 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-03 11:43:01] 2026-02-03 10:42:00,269 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-03 11:43:01] 2026-02-03 10:42:00,269 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-03 11:43:01] 2026-02-03 10:42:00,269 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-03 11:43:01] 2026-02-03 10:42:00,269 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-03 11:43:01] 2026-02-03 10:42:00,269 | INFO     | job 6993748514 has completed (purged errors)
[2026-02-03 11:43:01] 2026-02-03 10:42:00,269 | INFO     | overall cleanup function is called
[2026-02-03 11:43:01] 2026-02-03 10:42:01,275 | INFO     | --- collectZombieJob: --- 10, [240900]
[2026-02-03 11:43:01] 2026-02-03 10:42:01,275 | INFO     | zombie collector waiting for pid 240900
[2026-02-03 11:43:01] 2026-02-03 10:42:01,275 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-03 11:43:01] 2026-02-03 10:42:01,275 | INFO     | collected zombie processes
[2026-02-03 11:43:01] 2026-02-03 10:42:01,275 | INFO     | will attempt to kill all subprocesses of pid=240900
[2026-02-03 11:43:01] 2026-02-03 10:42:01,322 | INFO     | process IDs to be killed: [240900] (in reverse order)
[2026-02-03 11:43:01] 2026-02-03 10:42:01,363 | WARNING  | found no corresponding commands to process id(s)
[2026-02-03 11:43:01] 2026-02-03 10:42:01,364 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-03 11:43:01] 2026-02-03 10:42:01,365 | INFO     | did not find any defunct processes belonging to 240900
[2026-02-03 11:43:01] 2026-02-03 10:42:01,367 | INFO     | did not find any defunct processes belonging to 240900
[2026-02-03 11:43:01] 2026-02-03 10:42:01,367 | INFO     | ready for new job
[2026-02-03 11:43:01] 2026-02-03 10:42:01,367 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-03 11:43:01] 2026-02-03 10:42:01,368 | INFO     | **************************************
[2026-02-03 11:43:01] 2026-02-03 10:42:01,368 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-03 11:43:01] 2026-02-03 10:42:01,368 | INFO     | **************************************
[2026-02-03 11:43:01] 2026-02-03 10:42:01,368 | INFO     | 
[2026-02-03 11:43:01] 2026-02-03 10:42:01,369 | INFO     | architecture information:
[2026-02-03 11:43:01] 2026-02-03 10:42:01,369 | INFO     | executing command: cat /etc/os-release
[2026-02-03 11:43:01] 2026-02-03 10:42:01,380 | INFO     | cat /etc/os-release:
[2026-02-03 11:43:01] NAME="CentOS Linux"
[2026-02-03 11:43:01] VERSION="7 (Core)"
[2026-02-03 11:43:01] ID="centos"
[2026-02-03 11:43:01] ID_LIKE="rhel fedora"
[2026-02-03 11:43:01] VERSION_ID="7"
[2026-02-03 11:43:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-03 11:43:01] ANSI_COLOR="0;31"
[2026-02-03 11:43:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-03 11:43:01] HOME_URL="https://www.centos.org/"
[2026-02-03 11:43:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-03 11:43:01] 
[2026-02-03 11:43:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-03 11:43:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-03 11:43:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-03 11:43:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-03 11:43:01] 
[2026-02-03 11:43:01] 2026-02-03 10:42:01,380 | INFO     | **************************************
[2026-02-03 11:43:01] 2026-02-03 10:42:01,884 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2026-02-03 11:43:01] 2026-02-03 10:42:01,895 | INFO     | sufficient remaining disk space (126539005952 B)
[2026-02-03 11:43:01] 2026-02-03 10:42:01,895 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-03 11:43:01] 2026-02-03 10:42:01,895 | INFO     | current server update state: UPDATING_FINAL
[2026-02-03 11:43:01] 2026-02-03 10:42:01,896 | INFO     | update_server=False
[2026-02-03 11:43:01] 2026-02-03 10:42:01,896 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-03 11:43:01] 2026-02-03 10:42:01,896 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-03 11:43:01] 2026-02-03 10:42:01,896 | INFO     | aborting loop
[2026-02-03 11:43:01] 2026-02-03 10:42:01,896 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-03 11:43:01] 2026-02-03 10:42:02,677 | INFO     | all data control threads have been joined
[2026-02-03 11:43:01] 2026-02-03 10:42:02,899 | INFO     | [job] retrieve thread has finished
[2026-02-03 11:43:01] 2026-02-03 10:42:02,900 | INFO     | [job] job monitor thread has finished
[2026-02-03 11:43:01] 2026-02-03 10:42:02,901 | INFO     | [job] queue monitor thread has finished
[2026-02-03 11:43:01] 2026-02-03 10:42:03,006 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-03 11:43:01] 2026-02-03 10:42:03,021 | INFO     | all payload control threads have been joined
[2026-02-03 11:43:01] 2026-02-03 10:42:03,088 | INFO     | [payload] execute_payloads thread has finished
[2026-02-03 11:43:01] 2026-02-03 10:42:03,122 | INFO     | all job control threads have been joined
[2026-02-03 11:43:01] 2026-02-03 10:42:03,626 | INFO     | [payload] validate_post thread has finished
[2026-02-03 11:43:01] 2026-02-03 10:42:03,683 | INFO     | [data] control thread has finished
[2026-02-03 11:43:01] 2026-02-03 10:42:03,966 | INFO     | [job] validate thread has finished
[2026-02-03 11:43:01] 2026-02-03 10:42:04,022 | INFO     | [payload] control thread has finished
[2026-02-03 11:43:01] 2026-02-03 10:42:04,127 | INFO     | [job] control thread has finished
[2026-02-03 11:43:01] 2026-02-03 10:42:04,153 | INFO     | [job] create_data_payload thread has finished
[2026-02-03 11:43:01] 2026-02-03 10:42:04,167 | INFO     | [payload] failed_post thread has finished
[2026-02-03 11:43:01] 2026-02-03 10:42:04,289 | INFO     | [data] copytool_in thread has finished
[2026-02-03 11:43:01] 2026-02-03 10:42:04,357 | INFO     | [payload] validate_pre thread has finished
[2026-02-03 11:43:01] 2026-02-03 10:42:04,361 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-03 11:43:01] 2026-02-03 10:42:05,012 | INFO     | [data] copytool_out thread has finished
[2026-02-03 11:43:01] 2026-02-03 10:42:08,368 | INFO     | [data] queue_monitor thread has finished
[2026-02-03 11:43:01] 2026-02-03 10:42:12,558 | INFO     | job.realtimelogging is not enabled
[2026-02-03 11:43:01] 2026-02-03 10:42:13,563 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-03 11:43:01] 2026-02-03 10:42:32,155 | INFO     | PID=236415 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-03 11:43:01] 2026-02-03 10:42:32,155 | INFO     | found 0 job(s) in 20 queues
[2026-02-03 11:43:01] 2026-02-03 10:42:32,166 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-03 11:43:01] 2026-02-03 10:42:32,166 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-03 11:43:01] 2026-02-03 10:42:54,415 | INFO     | [monitor] cgroup control has ended
[2026-02-03 11:43:01] 2026-02-03 10:42:55,832 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140127146481472)>', '<ExcThread(monitor, started 140125900097280)>']
[2026-02-03 11:43:01] 2026-02-03 10:42:56,278 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-03 11:43:01] 2026-02-03 10:42:56,278 | INFO     | [monitor] control thread has ended
[2026-02-03 11:43:01] 2026-02-03 10:43:00,855 | INFO     | all workflow threads have been joined
[2026-02-03 11:43:01] 2026-02-03 10:43:00,855 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-03 11:43:01] 2026-02-03 10:43:00,856 | INFO     | traces error code: 0
[2026-02-03 11:43:01] 2026-02-03 10:43:00,856 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-03 11:43:01] 2026-02-03 10:43:00,941 [wrapper] ==== pilot stdout END ====
[2026-02-03 11:43:01] 2026-02-03 10:43:00,944 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-03 11:43:01] 2026-02-03 10:43:00,946 [wrapper] pilotpid: 236415
[2026-02-03 11:43:01] 2026-02-03 10:43:00,948 [wrapper] Pilot exit status: 0
[2026-02-03 11:43:01] 2026-02-03 10:43:00,957 [wrapper] pandaids: 6993748514
[2026-02-03 11:43:01] 2026-02-03 10:43:00,979 [wrapper] cleanup supervisor_pilot  246914 236416
[2026-02-03 11:43:01] 2026-02-03 10:43:00,981 [wrapper] Test setup, not cleaning
[2026-02-03 11:43:01] 2026-02-03 10:43:00,984 [wrapper] apfmon messages muted
[2026-02-03 11:43:01] 2026-02-03 10:43:00,986 [wrapper] ==== wrapper stdout END ====
[2026-02-03 11:43:01] 2026-02-03 10:43:00,989 [wrapper] ==== wrapper stderr END ====
[2026-02-03 11:43:01]  *** Error codes and diagnostics ***
[2026-02-03 11:43:01]     "exeErrorCode": 0,
[2026-02-03 11:43:01]     "exeErrorDiag": "",
[2026-02-03 11:43:01]     "pilotErrorCode": 0,
[2026-02-03 11:43:01]     "pilotErrorDiag": "",
[2026-02-03 11:43:01]  *** Listing of results directory ***
[2026-02-03 11:43:01] total 413676
[2026-02-03 11:43:01] -rwx------ 1 boinc boinc     36322 Feb  3 05:58 runpilot2-wrapper.sh
[2026-02-03 11:43:01] -rw-r--r-- 1 boinc boinc    584422 Feb  3 05:59 pilot3.tar.gz
[2026-02-03 11:43:01] -rw-r--r-- 1 boinc boinc      5111 Feb  3 06:00 queuedata.json
[2026-02-03 11:43:01] -rw-r--r-- 1 boinc boinc       100 Feb  3 09:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-03 11:43:01] -rwxr-xr-x 1 boinc boinc      7986 Feb  3 09:54 run_atlas
[2026-02-03 11:43:01] -rw-r--r-- 1 boinc boinc       105 Feb  3 09:54 job.xml
[2026-02-03 11:43:01] -rw-r--r-- 2 boinc boinc     15845 Feb  3 09:54 start_atlas.sh
[2026-02-03 11:43:01] drwxrwx--x 2 boinc boinc      4096 Feb  3 09:54 shared
[2026-02-03 11:43:01] -rw-r--r-- 2 boinc boinc    597764 Feb  3 09:54 input.tar.gz
[2026-02-03 11:43:01] -rw-r--r-- 1 boinc boinc      6671 Feb  3 09:54 init_data.xml
[2026-02-03 11:43:01] -rw-r--r-- 2 boinc boinc 249191192 Feb  3 09:54 EVNT.48330150._000003.pool.root.1
[2026-02-03 11:43:01] -rw-r--r-- 1 boinc boinc         0 Feb  3 09:54 boinc_setup_complete
[2026-02-03 11:43:01] -rw-r--r-- 1 boinc boinc         0 Feb  3 09:54 boinc_lockfile
[2026-02-03 11:43:01] -rw-r--r-- 1 boinc boinc      2611 Feb  3 09:54 pandaJob.out
[2026-02-03 11:43:01] -rw------- 1 boinc boinc   1009324 Feb  3 09:54 agis_schedconf.cvmfs.json
[2026-02-03 11:43:01] -rw------- 1 boinc boinc   1511668 Feb  3 09:54 agis_ddmendpoints.agis.ALL.json
[2026-02-03 11:43:01] -rw------- 1 boinc boinc       427 Feb  3 09:54 workernode_map.json
[2026-02-03 11:43:01] drwx------ 5 boinc boinc      4096 Feb  3 09:54 pilot3
[2026-02-03 11:43:01] -rw------- 1 boinc boinc 168066206 Feb  3 11:41 HITS.48330152._000062.pool.root.1
[2026-02-03 11:43:01] -rw-r--r-- 1 boinc boinc       529 Feb  3 11:41 boinc_task_state.xml
[2026-02-03 11:43:01] -rw------- 1 boinc boinc      1025 Feb  3 11:41 memory_monitor_summary.json
[2026-02-03 11:43:01] -rw------- 1 boinc boinc    273301 Feb  3 11:41 log.48330152._000062.job.log.tgz.1
[2026-02-03 11:43:01] -rw------- 1 boinc boinc      6312 Feb  3 11:42 heartbeat.json
[2026-02-03 11:43:01] -rw------- 1 boinc boinc        95 Feb  3 11:42 pilot_heartbeat.json
[2026-02-03 11:43:01] -rw-r--r-- 1 boinc boinc      8192 Feb  3 11:42 boinc_mmap_file
[2026-02-03 11:43:01] -rw-r--r-- 1 boinc boinc        27 Feb  3 11:42 wrapper_checkpoint.txt
[2026-02-03 11:43:01] -rw------- 1 boinc boinc      4823 Feb  3 11:43 pilotlog.txt
[2026-02-03 11:43:01] -rw------- 1 boinc boinc    930876 Feb  3 11:43 log.48330152._000062.job.log.1
[2026-02-03 11:43:01] -rw------- 1 boinc boinc       357 Feb  3 11:43 output.list
[2026-02-03 11:43:01] -rw-r--r-- 1 boinc boinc       620 Feb  3 11:43 runtime_log
[2026-02-03 11:43:01] -rw------- 1 boinc boinc   1218560 Feb  3 11:43 result.tar.gz
[2026-02-03 11:43:01] -rw------- 1 boinc boinc       644 Feb  3 11:43 Z4jKDm7fN78nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmkHUKDmC1AC3m.diag
[2026-02-03 11:43:01] -rw-r--r-- 1 boinc boinc      8900 Feb  3 11:43 runtime_log.err
[2026-02-03 11:43:01] -rw-r--r-- 1 boinc boinc     21058 Feb  3 11:43 stderr.txt
[2026-02-03 11:43:01] HITS file was successfully produced:
[2026-02-03 11:43:01] -rw------- 1 boinc boinc 168066206 Feb  3 11:41 shared/HITS.pool.root.1
[2026-02-03 11:43:01]  *** Contents of shared directory: ***
[2026-02-03 11:43:01] total 409280
[2026-02-03 11:43:01] -rw-r--r-- 2 boinc boinc     15845 Feb  3 09:54 start_atlas.sh
[2026-02-03 11:43:01] -rw-r--r-- 2 boinc boinc    597764 Feb  3 09:54 input.tar.gz
[2026-02-03 11:43:01] -rw-r--r-- 2 boinc boinc 249191192 Feb  3 09:54 ATLAS.root_0
[2026-02-03 11:43:01] -rw------- 1 boinc boinc 168066206 Feb  3 11:41 HITS.pool.root.1
[2026-02-03 11:43:01] -rw------- 1 boinc boinc   1218560 Feb  3 11:43 result.tar.gz
11:43:02 (232294): run_atlas exited; CPU time 18927.343038
11:43:02 (232294): called boinc_finish(0)

</stderr_txt>
]]>

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