Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:04 (4193013): wrapper (7.7.26015): starting
00:02:04 (4193013): wrapper: running run_atlas (--nthreads 8)
[2026-02-03 00:02:04] Arguments: --nthreads 8
[2026-02-03 00:02:04] Threads: 8
[2026-02-03 00:02:04] Checking for CVMFS
[2026-02-03 00:02:05] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-03 00:02:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-03 00:02:06] Running cvmfs_config stat atlas.cern.ch
[2026-02-03 00:02:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-03 00:02:08] 2.13.3.0 9277 128919 348252 155817 0 366 20660519 32935936 23436 16776704 0 635442630 99.737 436250409 32858 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-03 00:02:08] CVMFS is ok
[2026-02-03 00:02:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-03 00:02:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-03 00:02:08] Further information can be found at the LHC@home message board.
[2026-02-03 00:02:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 00:02:08] Checking for apptainer binary...
[2026-02-03 00:02:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-03 00:02:08] Running /usr/bin/apptainer --version
[2026-02-03 00:02:08] apptainer version 1.4.5-2.el9
[2026-02-03 00:02:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 00:02:10] c-5-2.aglt2.org
[2026-02-03 00:02:10] apptainer works
[2026-02-03 00:02:11] Set ATHENA_PROC_NUMBER=8
[2026-02-03 00:02:11] Set ATHENA_CORE_NUMBER=8
[2026-02-03 00:02:11] Starting ATLAS job with PandaID=6998108869
[2026-02-03 00:02:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-03 16:53:06]  *** The last 200 lines of the pilot log: ***
[2026-02-03 16:53:06] 2026-02-03 21:52:19,076 | INFO     | sum of square deviations: 298132905685.8961
[2026-02-03 16:53:06] 2026-02-03 21:52:19,101 | INFO     | sum of deviations: 1903063893427.8518
[2026-02-03 16:53:06] 2026-02-03 21:52:19,101 | INFO     | mean x: 1770125399.3951368
[2026-02-03 16:53:06] 2026-02-03 21:52:19,101 | INFO     | mean y: 2457668.843971631
[2026-02-03 16:53:06] 2026-02-03 21:52:19,101 | INFO     | intersect: -11296736986.232317
[2026-02-03 16:53:06] 2026-02-03 21:52:19,103 | INFO     | chi2: 8.761816395378483
[2026-02-03 16:53:06] 2026-02-03 21:52:19,104 | INFO     | sum of square deviations: 293624837782.6121
[2026-02-03 16:53:06] 2026-02-03 21:52:19,127 | INFO     | sum of deviations: 1887372448871.8474
[2026-02-03 16:53:06] 2026-02-03 21:52:19,127 | INFO     | mean x: 1770125246.8971486
[2026-02-03 16:53:06] 2026-02-03 21:52:19,127 | INFO     | mean y: 2457137.9093686356
[2026-02-03 16:53:06] 2026-02-03 21:52:19,128 | INFO     | intersect: -11375618529.243866
[2026-02-03 16:53:06] 2026-02-03 21:52:19,129 | INFO     | chi2: 8.759912489392644
[2026-02-03 16:53:06] 2026-02-03 21:52:19,129 | INFO     | current chi2=8.759912489392644 (change=0.021729580944470684 %)
[2026-02-03 16:53:06] 2026-02-03 21:52:19,129 | INFO     | right removable region: 981
[2026-02-03 16:53:06] 2026-02-03 21:52:19,131 | INFO     | sum of square deviations: 293624599882.6122
[2026-02-03 16:53:06] 2026-02-03 21:52:19,136 | INFO     | monitor loop #2856: job 0:6998108869 is in state 'finished'
[2026-02-03 16:53:06] 2026-02-03 21:52:19,147 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-03 16:53:06] 2026-02-03 21:52:19,154 | INFO     | sum of deviations: 1568655011837.2285
[2026-02-03 16:53:06] 2026-02-03 21:52:19,155 | INFO     | mean x: 1770125551.8971486
[2026-02-03 16:53:06] 2026-02-03 21:52:19,155 | INFO     | mean y: 2468978.081466395
[2026-02-03 16:53:06] 2026-02-03 21:52:19,155 | INFO     | intersect: -9454219322.812609
[2026-02-03 16:53:06] 2026-02-03 21:52:19,156 | INFO     | chi2: 4.5277798115525165
[2026-02-03 16:53:06] 2026-02-03 21:52:19,157 | INFO     | current chi2=4.5277798115525165 (change=48.32373097956328 %)
[2026-02-03 16:53:06] 2026-02-03 21:52:19,158 | INFO     | sum of square deviations: 289161969354.31934
[2026-02-03 16:53:06] 2026-02-03 21:52:19,182 | INFO     | sum of deviations: 1317074287674.412
[2026-02-03 16:53:06] 2026-02-03 21:52:19,182 | INFO     | mean x: 1770125704.3991811
[2026-02-03 16:53:06] 2026-02-03 21:52:19,182 | INFO     | mean y: 2477574.01432958
[2026-02-03 16:53:06] 2026-02-03 21:52:19,182 | INFO     | intersect: -8060087003.276247
[2026-02-03 16:53:06] 2026-02-03 21:52:19,184 | INFO     | chi2: 2.2766119485916847
[2026-02-03 16:53:06] 2026-02-03 21:52:19,184 | INFO     | current chi2=2.2766119485916847 (change=49.71902249347536 %)
[2026-02-03 16:53:06] 2026-02-03 21:52:19,185 | INFO     | sum of square deviations: 284745080490.50464
[2026-02-03 16:53:06] 2026-02-03 21:52:19,208 | INFO     | sum of deviations: 1159509740505.287
[2026-02-03 16:53:06] 2026-02-03 21:52:19,209 | INFO     | mean x: 1770125856.8960905
[2026-02-03 16:53:06] 2026-02-03 21:52:19,209 | INFO     | mean y: 2483010.022633745
[2026-02-03 16:53:06] 2026-02-03 21:52:19,209 | INFO     | intersect: -7205642129.33242
[2026-02-03 16:53:06] 2026-02-03 21:52:19,210 | INFO     | chi2: 1.395234334345166
[2026-02-03 16:53:06] 2026-02-03 21:52:19,211 | INFO     | current chi2=1.395234334345166 (change=38.71444208099409 %)
[2026-02-03 16:53:06] 2026-02-03 21:52:19,212 | INFO     | sum of square deviations: 280373400808.6723
[2026-02-03 16:53:06] 2026-02-03 21:52:19,235 | INFO     | sum of deviations: 1055578084142.3405
[2026-02-03 16:53:06] 2026-02-03 21:52:19,235 | INFO     | mean x: 1770126009.392968
[2026-02-03 16:53:06] 2026-02-03 21:52:19,235 | INFO     | mean y: 2486635.4912099275
[2026-02-03 16:53:06] 2026-02-03 21:52:19,236 | INFO     | intersect: -6661862465.729809
[2026-02-03 16:53:06] 2026-02-03 21:52:19,237 | INFO     | chi2: 1.0820466222730853
[2026-02-03 16:53:06] 2026-02-03 21:52:19,237 | INFO     | current chi2=1.0820466222730853 (change=22.446961371479656 %)
[2026-02-03 16:53:06] 2026-02-03 21:52:19,237 | INFO     | left removable region: 40
[2026-02-03 16:53:06] 2026-02-03 21:52:19,239 | INFO     | sum of square deviations: 258360256242.73962
[2026-02-03 16:53:06] 2026-02-03 21:52:19,260 | INFO     | sum of deviations: 812097767147.391
[2026-02-03 16:53:06] 2026-02-03 21:52:19,260 | INFO     | mean x: 1770126436.3846972
[2026-02-03 16:53:06] 2026-02-03 21:52:19,260 | INFO     | mean y: 2494461.929861849
[2026-02-03 16:53:06] 2026-02-03 21:52:19,261 | INFO     | intersect: -5561502677.034029
[2026-02-03 16:53:06] 2026-02-03 21:52:19,262 | INFO     | chi2: 0.7245465114271274
[2026-02-03 16:53:06] 2026-02-03 21:52:19,262 | INFO     | current memory leak: 3.14 B/s (using 941 data points, chi2=0.72)
[2026-02-03 16:53:06] 2026-02-03 21:52:19,263 | INFO     | could have reported an average CPU frequency of 2599 MHz (37 samples)
[2026-02-03 16:53:06] 2026-02-03 21:52:19,264 | INFO     | ..............................
[2026-02-03 16:53:06] 2026-02-03 21:52:19,264 | INFO     | . Timing measurements:
[2026-02-03 16:53:06] 2026-02-03 21:52:19,264 | INFO     | . get job = 1 s
[2026-02-03 16:53:06] 2026-02-03 21:52:19,264 | INFO     | . initial setup = 86 s
[2026-02-03 16:53:06] 2026-02-03 21:52:19,264 | INFO     | . payload setup = 93 s
[2026-02-03 16:53:06] 2026-02-03 21:52:19,264 | INFO     | . stage-in = 2 s
[2026-02-03 16:53:06] 2026-02-03 21:52:19,264 | INFO     | . payload execution = 60273 s
[2026-02-03 16:53:06] 2026-02-03 21:52:19,264 | INFO     | . stage-out = 2 s
[2026-02-03 16:53:06] 2026-02-03 21:52:19,264 | INFO     | . log creation = 0 s
[2026-02-03 16:53:06] 2026-02-03 21:52:19,265 | INFO     | ..............................
[2026-02-03 16:53:06] 2026-02-03 21:52:19,413 | INFO     | 
[2026-02-03 16:53:06] 2026-02-03 21:52:19,413 | INFO     | job summary report
[2026-02-03 16:53:06] 2026-02-03 21:52:19,413 | INFO     | --------------------------------------------------
[2026-02-03 16:53:06] 2026-02-03 21:52:19,413 | INFO     | PanDA job id: 6998108869
[2026-02-03 16:53:06] 2026-02-03 21:52:19,413 | INFO     | task id: 48317952
[2026-02-03 16:53:06] 2026-02-03 21:52:19,414 | INFO     | errors: (none)
[2026-02-03 16:53:06] 2026-02-03 21:52:19,414 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-03 16:53:06] 2026-02-03 21:52:19,414 | INFO     | pilot state: finished 
[2026-02-03 16:53:06] 2026-02-03 21:52:19,414 | INFO     | transexitcode: 0
[2026-02-03 16:53:06] 2026-02-03 21:52:19,414 | INFO     | exeerrorcode: 0
[2026-02-03 16:53:06] 2026-02-03 21:52:19,414 | INFO     | exeerrordiag: 
[2026-02-03 16:53:06] 2026-02-03 21:52:19,414 | INFO     | exitcode: 0
[2026-02-03 16:53:06] 2026-02-03 21:52:19,414 | INFO     | exitmsg: OK
[2026-02-03 16:53:06] 2026-02-03 21:52:19,414 | INFO     | cpuconsumptiontime: 53684 s
[2026-02-03 16:53:06] 2026-02-03 21:52:19,414 | INFO     | nevents: 400
[2026-02-03 16:53:06] 2026-02-03 21:52:19,414 | INFO     | neventsw: 0
[2026-02-03 16:53:06] 2026-02-03 21:52:19,415 | INFO     | pid: 33311
[2026-02-03 16:53:06] 2026-02-03 21:52:19,415 | INFO     | pgrp: 33311
[2026-02-03 16:53:06] 2026-02-03 21:52:19,415 | INFO     | corecount: 8
[2026-02-03 16:53:06] 2026-02-03 21:52:19,415 | INFO     | event service: False
[2026-02-03 16:53:06] 2026-02-03 21:52:19,415 | INFO     | sizes: {0: 2277182, 1: 2277867, 2: 2277895, 5: 2277895, 6: 2278384, 17: 2278384, 60371: 2328952, 60374: 2337950, 60376: 2338200}
[2026-02-03 16:53:06] 2026-02-03 21:52:19,415 | INFO     | --------------------------------------------------
[2026-02-03 16:53:06] 2026-02-03 21:52:19,415 | INFO     | 
[2026-02-03 16:53:06] 2026-02-03 21:52:19,415 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-02-03 16:53:06] 2026-02-03 21:52:19,435 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-03 16:53:06] 2026-02-03 21:52:19,436 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-03 16:53:06] 2026-02-03 21:52:19,436 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-03 16:53:06] 2026-02-03 21:52:19,436 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-03 16:53:06] 2026-02-03 21:52:19,436 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-03 16:53:06] 2026-02-03 21:52:19,436 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-03 16:53:06] 2026-02-03 21:52:19,436 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-03 16:53:06] 2026-02-03 21:52:19,437 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-03 16:53:06] 2026-02-03 21:52:19,437 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-03 16:53:06] 2026-02-03 21:52:19,437 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-03 16:53:06] 2026-02-03 21:52:19,437 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-03 16:53:06] 2026-02-03 21:52:19,437 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-03 16:53:06] 2026-02-03 21:52:19,437 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-03 16:53:06] 2026-02-03 21:52:19,437 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-03 16:53:06] 2026-02-03 21:52:19,437 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-03 16:53:06] 2026-02-03 21:52:19,437 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-03 16:53:06] 2026-02-03 21:52:19,438 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-03 16:53:06] 2026-02-03 21:52:19,438 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-03 16:53:06] 2026-02-03 21:52:19,438 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-03 16:53:06] 2026-02-03 21:52:19,438 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-03 16:53:06] 2026-02-03 21:52:19,438 | INFO     | job 6998108869 has completed (purged errors)
[2026-02-03 16:53:06] 2026-02-03 21:52:19,438 | INFO     | overall cleanup function is called
[2026-02-03 16:53:06] 2026-02-03 21:52:20,447 | INFO     | --- collectZombieJob: --- 10, [33311]
[2026-02-03 16:53:06] 2026-02-03 21:52:20,447 | INFO     | zombie collector waiting for pid 33311
[2026-02-03 16:53:06] 2026-02-03 21:52:20,447 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-03 16:53:06] 2026-02-03 21:52:20,447 | INFO     | collected zombie processes
[2026-02-03 16:53:06] 2026-02-03 21:52:20,447 | INFO     | will attempt to kill all subprocesses of pid=33311
[2026-02-03 16:53:06] 2026-02-03 21:52:20,860 | INFO     | process IDs to be killed: [33311] (in reverse order)
[2026-02-03 16:53:06] 2026-02-03 21:52:20,985 | WARNING  | found no corresponding commands to process id(s)
[2026-02-03 16:53:06] 2026-02-03 21:52:20,985 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-03 16:53:06] 2026-02-03 21:52:20,996 | INFO     | did not find any defunct processes belonging to 33311
[2026-02-03 16:53:06] 2026-02-03 21:52:21,008 | INFO     | did not find any defunct processes belonging to 33311
[2026-02-03 16:53:06] 2026-02-03 21:52:21,008 | INFO     | ready for new job
[2026-02-03 16:53:06] 2026-02-03 21:52:21,009 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-03 16:53:06] 2026-02-03 21:52:21,011 | INFO     | **************************************
[2026-02-03 16:53:06] 2026-02-03 21:52:21,012 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-03 16:53:06] 2026-02-03 21:52:21,012 | INFO     | **************************************
[2026-02-03 16:53:06] 2026-02-03 21:52:21,012 | INFO     | 
[2026-02-03 16:53:06] 2026-02-03 21:52:21,014 | INFO     | architecture information:
[2026-02-03 16:53:06] 2026-02-03 21:52:21,014 | INFO     | executing command: cat /etc/os-release
[2026-02-03 16:53:06] 2026-02-03 21:52:21,034 | INFO     | cat /etc/os-release:
[2026-02-03 16:53:06] NAME="CentOS Linux"
[2026-02-03 16:53:06] VERSION="7 (Core)"
[2026-02-03 16:53:06] ID="centos"
[2026-02-03 16:53:06] ID_LIKE="rhel fedora"
[2026-02-03 16:53:06] VERSION_ID="7"
[2026-02-03 16:53:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-03 16:53:06] ANSI_COLOR="0;31"
[2026-02-03 16:53:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-03 16:53:06] HOME_URL="https://www.centos.org/"
[2026-02-03 16:53:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-03 16:53:06] 
[2026-02-03 16:53:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-03 16:53:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-03 16:53:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-03 16:53:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-03 16:53:06] 
[2026-02-03 16:53:06] 2026-02-03 21:52:21,034 | INFO     | **************************************
[2026-02-03 16:53:06] 2026-02-03 21:52:21,537 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-02-03 16:53:06] 2026-02-03 21:52:21,559 | INFO     | sufficient remaining disk space (73472671744 B)
[2026-02-03 16:53:06] 2026-02-03 21:52:21,560 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-03 16:53:06] 2026-02-03 21:52:21,560 | INFO     | current server update state: UPDATING_FINAL
[2026-02-03 16:53:06] 2026-02-03 21:52:21,561 | INFO     | update_server=False
[2026-02-03 16:53:06] 2026-02-03 21:52:21,561 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-03 16:53:06] 2026-02-03 21:52:21,561 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-03 16:53:06] 2026-02-03 21:52:21,651 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-03 16:53:06] 2026-02-03 21:52:21,652 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-03 16:53:06] 2026-02-03 21:52:21,652 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-03 16:53:06] 2026-02-03 21:52:21,652 | INFO     | will abort loop
[2026-02-03 16:53:06] 2026-02-03 21:52:21,920 | INFO     | all job control threads have been joined
[2026-02-03 16:53:06] 2026-02-03 21:52:22,027 | INFO     | all data control threads have been joined
[2026-02-03 16:53:06] 2026-02-03 21:52:22,253 | INFO     | all payload control threads have been joined
[2026-02-03 16:53:06] 2026-02-03 21:52:22,566 | INFO     | [job] retrieve thread has finished
[2026-02-03 16:53:06] 2026-02-03 21:52:22,657 | INFO     | [job] job monitor thread has finished
[2026-02-03 16:53:06] 2026-02-03 21:52:22,759 | INFO     | [job] create_data_payload thread has finished
[2026-02-03 16:53:06] 2026-02-03 21:52:22,769 | INFO     | [payload] execute_payloads thread has finished
[2026-02-03 16:53:06] 2026-02-03 21:52:22,800 | INFO     | [payload] failed_post thread has finished
[2026-02-03 16:53:06] 2026-02-03 21:52:22,926 | INFO     | [job] control thread has finished
[2026-02-03 16:53:06] 2026-02-03 21:52:23,004 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-03 16:53:06] 2026-02-03 21:52:23,032 | INFO     | [data] control thread has finished
[2026-02-03 16:53:06] 2026-02-03 21:52:23,046 | INFO     | [job] validate thread has finished
[2026-02-03 16:53:06] 2026-02-03 21:52:23,258 | INFO     | [payload] control thread has finished
[2026-02-03 16:53:06] 2026-02-03 21:52:23,342 | INFO     | [payload] validate_pre thread has finished
[2026-02-03 16:53:06] 2026-02-03 21:52:23,402 | INFO     | [payload] validate_post thread has finished
[2026-02-03 16:53:06] 2026-02-03 21:52:23,567 | INFO     | [data] copytool_out thread has finished
[2026-02-03 16:53:06] 2026-02-03 21:52:23,935 | INFO     | [data] copytool_in thread has finished
[2026-02-03 16:53:06] 2026-02-03 21:52:24,386 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-03 16:53:06] 2026-02-03 21:52:25,052 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-03 16:53:06] 2026-02-03 21:52:25,391 | INFO     | [job] queue monitor thread has finished
[2026-02-03 16:53:06] 2026-02-03 21:52:29,061 | INFO     | [data] queue_monitor thread has finished
[2026-02-03 16:53:06] 2026-02-03 21:52:51,691 | INFO     | PID=12553 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-03 16:53:06] 2026-02-03 21:52:51,692 | INFO     | .. there are 28 such processes running
[2026-02-03 16:53:06] 2026-02-03 21:52:51,693 | INFO     | found 0 job(s) in 20 queues
[2026-02-03 16:53:06] 2026-02-03 21:52:51,693 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-03 16:53:06] 2026-02-03 21:52:51,693 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-03 16:53:06] 2026-02-03 21:52:59,914 | INFO     | [monitor] cgroup control has ended
[2026-02-03 16:53:06] 2026-02-03 21:53:00,737 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140666877605696)>', '<ExcThread(monitor, started 140665941911296)>']
[2026-02-03 16:53:06] 2026-02-03 21:53:00,741 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-03 16:53:06] 2026-02-03 21:53:00,741 | INFO     | [monitor] control thread has ended
[2026-02-03 16:53:06] 2026-02-03 21:53:05,763 | INFO     | all workflow threads have been joined
[2026-02-03 16:53:06] 2026-02-03 21:53:05,763 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-03 16:53:06] 2026-02-03 21:53:05,763 | INFO     | traces error code: 0
[2026-02-03 16:53:06] 2026-02-03 21:53:05,764 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-03 16:53:06] 2026-02-03 21:53:05,933 [wrapper] ==== pilot stdout END ====
[2026-02-03 16:53:06] 2026-02-03 21:53:05,944 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-03 16:53:06] 2026-02-03 21:53:05,947 [wrapper] pilotpid: 12553
[2026-02-03 16:53:06] 2026-02-03 21:53:05,949 [wrapper] Pilot exit status: 0
[2026-02-03 16:53:06] 2026-02-03 21:53:05,975 [wrapper] pandaids: 6998108869
[2026-02-03 16:53:06] 2026-02-03 21:53:06,058 [wrapper] cleanup supervisor_pilot 2584286 12554
[2026-02-03 16:53:06] 2026-02-03 21:53:06,063 [wrapper] Test setup, not cleaning
[2026-02-03 16:53:06] 2026-02-03 21:53:06,066 [wrapper] apfmon messages muted
[2026-02-03 16:53:06] 2026-02-03 21:53:06,068 [wrapper] ==== wrapper stdout END ====
[2026-02-03 16:53:06] 2026-02-03 21:53:06,071 [wrapper] ==== wrapper stderr END ====
[2026-02-03 16:53:06]  *** Error codes and diagnostics ***
[2026-02-03 16:53:06]     "exeErrorCode": 0,
[2026-02-03 16:53:06]     "exeErrorDiag": "",
[2026-02-03 16:53:06]     "pilotErrorCode": 0,
[2026-02-03 16:53:06]     "pilotErrorDiag": "",
[2026-02-03 16:53:06]  *** Listing of results directory ***
[2026-02-03 16:53:06] total 690876
[2026-02-03 16:53:06] -rw-r--r--. 1 boincer umatlas      5111 Feb  2 20:27 queuedata.json
[2026-02-03 16:53:06] -rw-r--r--. 1 boincer umatlas    584422 Feb  2 20:27 pilot3.tar.gz
[2026-02-03 16:53:06] -rwx------. 1 boincer umatlas     36322 Feb  2 20:28 runpilot2-wrapper.sh
[2026-02-03 16:53:06] -rw-r--r--. 1 boincer umatlas       100 Feb  3 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-03 16:53:06] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  3 00:02 run_atlas
[2026-02-03 16:53:06] -rw-r--r--. 1 boincer umatlas       105 Feb  3 00:02 job.xml
[2026-02-03 16:53:06] -rw-r--r--. 2 boincer umatlas 499253953 Feb  3 00:02 EVNT.48317949._000183.pool.root.1
[2026-02-03 16:53:06] -rw-r--r--. 2 boincer umatlas     15845 Feb  3 00:02 start_atlas.sh
[2026-02-03 16:53:06] drwxrwx--x. 2 boincer umatlas      4096 Feb  3 00:02 shared
[2026-02-03 16:53:06] -rw-r--r--. 2 boincer umatlas    597763 Feb  3 00:02 input.tar.gz
[2026-02-03 16:53:06] -rw-r--r--. 1 boincer umatlas         0 Feb  3 00:02 boinc_lockfile
[2026-02-03 16:53:06] -rw-r--r--. 1 boincer umatlas      2522 Feb  3 00:02 pandaJob.out
[2026-02-03 16:53:06] -rw-------. 1 boincer umatlas        57 Feb  3 00:02 setup.sh.local
[2026-02-03 16:53:06] -rw-------. 1 boincer umatlas       439 Feb  3 00:05 workernode_map.json
[2026-02-03 16:53:06] -rw-------. 1 boincer umatlas   1009324 Feb  3 00:05 agis_schedconf.cvmfs.json
[2026-02-03 16:53:06] drwx------. 5 boincer umatlas      4096 Feb  3 00:05 pilot3
[2026-02-03 16:53:06] -rw-r--r--. 1 boincer umatlas      6658 Feb  3 16:45 init_data.xml
[2026-02-03 16:53:06] -rw-------. 1 boincer umatlas 189630341 Feb  3 16:51 HITS.48317952._009743.pool.root.1
[2026-02-03 16:53:06] -rw-r--r--. 1 boincer umatlas       532 Feb  3 16:51 boinc_task_state.xml
[2026-02-03 16:53:06] -rw-------. 1 boincer umatlas      1054 Feb  3 16:52 memory_monitor_summary.json
[2026-02-03 16:53:06] -rw-------. 1 boincer umatlas   1511668 Feb  3 16:52 agis_ddmendpoints.agis.ALL.json
[2026-02-03 16:53:06] -rw-------. 1 boincer umatlas    978106 Feb  3 16:52 log.48317952._009743.job.log.tgz.1
[2026-02-03 16:53:06] -rw-------. 1 boincer umatlas      6408 Feb  3 16:52 heartbeat.json
[2026-02-03 16:53:06] -rw-------. 1 boincer umatlas        95 Feb  3 16:52 pilot_heartbeat.json
[2026-02-03 16:53:06] -rw-------. 1 boincer umatlas      5004 Feb  3 16:53 pilotlog.txt
[2026-02-03 16:53:06] -rw-------. 1 boincer umatlas   6333488 Feb  3 16:53 log.48317952._009743.job.log.1
[2026-02-03 16:53:06] -rw-r--r--. 1 boincer umatlas      8192 Feb  3 16:53 boinc_mmap_file
[2026-02-03 16:53:06] -rw-------. 1 boincer umatlas       357 Feb  3 16:53 output.list
[2026-02-03 16:53:06] -rw-r--r--. 1 boincer umatlas        28 Feb  3 16:53 wrapper_checkpoint.txt
[2026-02-03 16:53:06] -rw-r--r--. 1 boincer umatlas       620 Feb  3 16:53 runtime_log
[2026-02-03 16:53:06] -rw-------. 1 boincer umatlas   7331840 Feb  3 16:53 result.tar.gz
[2026-02-03 16:53:06] -rw-------. 1 boincer umatlas       658 Feb  3 16:53 ZmvMDmHOK78n9Rq4apOajLDm4fhM0noT9bVooX4SDmaXTKDmvmQ2Rn.diag
[2026-02-03 16:53:06] -rw-r--r--. 1 boincer umatlas      9327 Feb  3 16:53 runtime_log.err
[2026-02-03 16:53:06] -rw-r--r--. 1 boincer umatlas     21087 Feb  3 16:53 stderr.txt
[2026-02-03 16:53:06] HITS file was successfully produced:
[2026-02-03 16:53:06] -rw-------. 1 boincer umatlas 189630341 Feb  3 16:51 shared/HITS.pool.root.1
[2026-02-03 16:53:06]  *** Contents of shared directory: ***
[2026-02-03 16:53:06] total 680512
[2026-02-03 16:53:06] -rw-r--r--. 2 boincer umatlas 499253953 Feb  3 00:02 ATLAS.root_0
[2026-02-03 16:53:06] -rw-r--r--. 2 boincer umatlas     15845 Feb  3 00:02 start_atlas.sh
[2026-02-03 16:53:06] -rw-r--r--. 2 boincer umatlas    597763 Feb  3 00:02 input.tar.gz
[2026-02-03 16:53:06] -rw-------. 1 boincer umatlas 189630341 Feb  3 16:51 HITS.pool.root.1
[2026-02-03 16:53:06] -rw-------. 1 boincer umatlas   7331840 Feb  3 16:53 result.tar.gz
16:53:28 (4193013): run_atlas exited; CPU time 56369.386368
16:53:28 (4193013): called boinc_finish(0)

</stderr_txt>
]]>

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