Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:02 (5283): wrapper (7.7.26015): starting
00:03:02 (5283): wrapper: running run_atlas (--nthreads 8)
[2026-02-03 00:03:02] Arguments: --nthreads 8
[2026-02-03 00:03:02] Threads: 8
[2026-02-03 00:03:02] Checking for CVMFS
[2026-02-03 00:03:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-03 00:03:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-03 00:03:04] Running cvmfs_config stat atlas.cern.ch
[2026-02-03 00:03:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-03 00:03:05] 2.13.3.0 8749 128960 599328 155817 3 248 14796005 21042176 17899 16776704 0 473083204 99.462 656409234 32297 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-03 00:03:05] CVMFS is ok
[2026-02-03 00:03:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-03 00:03:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-03 00:03:06] Further information can be found at the LHC@home message board.
[2026-02-03 00:03:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 00:03:06] Checking for apptainer binary...
[2026-02-03 00:03:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-03 00:03:06] Running /usr/bin/apptainer --version
[2026-02-03 00:03:06] apptainer version 1.4.5-2.el9
[2026-02-03 00:03:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 00:03:07] c-16-10.aglt2.org
[2026-02-03 00:03:07] apptainer works
[2026-02-03 00:03:07] Set ATHENA_PROC_NUMBER=8
[2026-02-03 00:03:07] Set ATHENA_CORE_NUMBER=8
[2026-02-03 00:03:07] Starting ATLAS job with PandaID=6993667651
[2026-02-03 00:03:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-03 19:07:33]  *** The last 200 lines of the pilot log: ***
[2026-02-03 19:07:33] 2026-02-04 00:06:56,251 | INFO     | this job has now completed (state=finished)
[2026-02-03 19:07:33] 2026-02-04 00:06:56,251 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-03 19:07:33] 2026-02-04 00:06:56,251 | INFO     | log transfer has been attempted: DONE
[2026-02-03 19:07:33] 2026-02-04 00:06:56,251 | INFO     | job 6993667651 has finished - writing final server update
[2026-02-03 19:07:33] 2026-02-04 00:06:56,252 | INFO     | total number of processed events: 400 (read)
[2026-02-03 19:07:33] 2026-02-04 00:06:56,260 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6993667651/memory_monitor_summary.json (trf name=prmon)
[2026-02-03 19:07:33] 2026-02-04 00:06:56,261 | INFO     | extracted standard info from prmon json
[2026-02-03 19:07:33] 2026-02-04 00:06:56,261 | INFO     | extracted standard memory fields from prmon json
[2026-02-03 19:07:33] 2026-02-04 00:06:56,261 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-03 19:07:33] 2026-02-04 00:06:56,261 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-03 19:07:33] 2026-02-04 00:06:56,262 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-03 19:07:33] 2026-02-04 00:06:56,290 | INFO     | fitting pss+swap vs Time
[2026-02-03 19:07:33] 2026-02-04 00:06:56,292 | INFO     | sum of square deviations: 437977202333.80426
[2026-02-03 19:07:33] 2026-02-04 00:06:56,346 | INFO     | sum of deviations: 575419573770.8623
[2026-02-03 19:07:33] 2026-02-04 00:06:56,347 | INFO     | mean x: 1770129359.7843137
[2026-02-03 19:07:33] 2026-02-04 00:06:56,347 | INFO     | mean y: 2504644.0490196077
[2026-02-03 19:07:33] 2026-02-04 00:06:56,347 | INFO     | intersect: -2323112023.4369707
[2026-02-03 19:07:33] 2026-02-04 00:06:56,349 | INFO     | chi2: 3.1859665670153894
[2026-02-03 19:07:33] 2026-02-04 00:06:56,350 | INFO     | sum of square deviations: 432147971725.8976
[2026-02-03 19:07:33] 2026-02-04 00:06:56,516 | INFO     | sum of deviations: 641560549281.2327
[2026-02-03 19:07:33] 2026-02-04 00:06:56,516 | INFO     | mean x: 1770129207.2855864
[2026-02-03 19:07:33] 2026-02-04 00:06:56,516 | INFO     | mean y: 2506367.6230975827
[2026-02-03 19:07:33] 2026-02-04 00:06:56,517 | INFO     | intersect: -2625401526.9561453
[2026-02-03 19:07:33] 2026-02-04 00:06:56,518 | INFO     | chi2: 2.4968804687042603
[2026-02-03 19:07:33] 2026-02-04 00:06:56,519 | INFO     | current chi2=2.4968804687042603 (change=21.628792512931618 %)
[2026-02-03 19:07:33] 2026-02-04 00:06:56,519 | INFO     | right removable region: 1116
[2026-02-03 19:07:33] 2026-02-04 00:06:56,520 | INFO     | sum of square deviations: 432147845455.4687
[2026-02-03 19:07:33] 2026-02-04 00:06:56,531 | INFO     | PID=13066 has CPU usage=16.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-03 19:07:33] 2026-02-04 00:06:56,531 | INFO     | .. there are 35 such processes running
[2026-02-03 19:07:33] 2026-02-04 00:06:56,592 | INFO     | sum of deviations: 315894606057.54333
[2026-02-03 19:07:33] 2026-02-04 00:06:56,593 | INFO     | mean x: 1770129512.284691
[2026-02-03 19:07:33] 2026-02-04 00:06:56,593 | INFO     | mean y: 2511425.8504923903
[2026-02-03 19:07:33] 2026-02-04 00:06:56,593 | INFO     | intersect: -1291430846.0695574
[2026-02-03 19:07:33] 2026-02-04 00:06:56,595 | INFO     | chi2: 0.988981301189338
[2026-02-03 19:07:33] 2026-02-04 00:06:56,595 | INFO     | current chi2=0.988981301189338 (change=68.95820215352056 %)
[2026-02-03 19:07:33] 2026-02-04 00:06:56,596 | INFO     | sum of square deviations: 426370442917.6325
[2026-02-03 19:07:33] 2026-02-04 00:06:56,690 | INFO     | sum of deviations: 227672788244.61792
[2026-02-03 19:07:33] 2026-02-04 00:06:56,690 | INFO     | mean x: 1770129664.7850718
[2026-02-03 19:07:33] 2026-02-04 00:06:56,690 | INFO     | mean y: 2513752.9649280575
[2026-02-03 19:07:33] 2026-02-04 00:06:56,690 | INFO     | intersect: -942698006.0358781
[2026-02-03 19:07:33] 2026-02-04 00:06:56,700 | INFO     | chi2: 0.7742168735504803
[2026-02-03 19:07:33] 2026-02-04 00:06:56,701 | INFO     | current chi2=0.7742168735504803 (change=21.71572176143112 %)
[2026-02-03 19:07:33] 2026-02-04 00:06:56,701 | INFO     | left removable region: 20
[2026-02-03 19:07:33] 2026-02-04 00:06:56,702 | INFO     | sum of square deviations: 408230001445.12305
[2026-02-03 19:07:33] 2026-02-04 00:06:57,112 | INFO     | sum of deviations: 230740241104.27686
[2026-02-03 19:07:33] 2026-02-04 00:06:57,112 | INFO     | mean x: 1770129786.7782848
[2026-02-03 19:07:33] 2026-02-04 00:06:57,113 | INFO     | mean y: 2517210.902372263
[2026-02-03 19:07:33] 2026-02-04 00:06:57,113 | INFO     | intersect: -997997627.1575856
[2026-02-03 19:07:33] 2026-02-04 00:06:57,114 | INFO     | chi2: 0.009831072911124093
[2026-02-03 19:07:33] 2026-02-04 00:06:57,144 | INFO     | current memory leak: 0.57 B/s (using 1096 data points, chi2=0.01)
[2026-02-03 19:07:33] 2026-02-04 00:06:57,145 | INFO     | could have reported an average CPU frequency of 2899 MHz (41 samples)
[2026-02-03 19:07:33] 2026-02-04 00:06:57,145 | INFO     | ..............................
[2026-02-03 19:07:33] 2026-02-04 00:06:57,145 | INFO     | . Timing measurements:
[2026-02-03 19:07:33] 2026-02-04 00:06:57,146 | INFO     | . get job = 0 s
[2026-02-03 19:07:33] 2026-02-04 00:06:57,146 | INFO     | . initial setup = 43 s
[2026-02-03 19:07:33] 2026-02-04 00:06:57,146 | INFO     | . payload setup = 34 s
[2026-02-03 19:07:33] 2026-02-04 00:06:57,156 | INFO     | . stage-in = 0 s
[2026-02-03 19:07:33] 2026-02-04 00:06:57,156 | INFO     | . payload execution = 68455 s
[2026-02-03 19:07:33] 2026-02-04 00:06:57,156 | INFO     | . stage-out = 6 s
[2026-02-03 19:07:33] 2026-02-04 00:06:57,156 | INFO     | . log creation = 1 s
[2026-02-03 19:07:33] 2026-02-04 00:06:57,156 | INFO     | ..............................
[2026-02-03 19:07:33] 2026-02-04 00:06:57,570 | INFO     | time since job start (68515s) is within the limit (349056.0s)
[2026-02-03 19:07:33] 2026-02-04 00:06:57,636 | INFO     | 
[2026-02-03 19:07:33] 2026-02-04 00:06:57,636 | INFO     | job summary report
[2026-02-03 19:07:33] 2026-02-04 00:06:57,636 | INFO     | --------------------------------------------------
[2026-02-03 19:07:33] 2026-02-04 00:06:57,637 | INFO     | PanDA job id: 6993667651
[2026-02-03 19:07:33] 2026-02-04 00:06:57,637 | INFO     | task id: 48318042
[2026-02-03 19:07:33] 2026-02-04 00:06:57,637 | INFO     | errors: (none)
[2026-02-03 19:07:33] 2026-02-04 00:06:57,637 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-03 19:07:33] 2026-02-04 00:06:57,637 | INFO     | pilot state: finished 
[2026-02-03 19:07:33] 2026-02-04 00:06:57,637 | INFO     | transexitcode: 0
[2026-02-03 19:07:33] 2026-02-04 00:06:57,638 | INFO     | exeerrorcode: 0
[2026-02-03 19:07:33] 2026-02-04 00:06:57,638 | INFO     | exeerrordiag: 
[2026-02-03 19:07:33] 2026-02-04 00:06:57,638 | INFO     | exitcode: 0
[2026-02-03 19:07:33] 2026-02-04 00:06:57,638 | INFO     | exitmsg: OK
[2026-02-03 19:07:33] 2026-02-04 00:06:57,638 | INFO     | cpuconsumptiontime: 87204 s
[2026-02-03 19:07:33] 2026-02-04 00:06:57,638 | INFO     | nevents: 400
[2026-02-03 19:07:33] 2026-02-04 00:06:57,639 | INFO     | neventsw: 0
[2026-02-03 19:07:33] 2026-02-04 00:06:57,639 | INFO     | pid: 36214
[2026-02-03 19:07:33] 2026-02-04 00:06:57,639 | INFO     | pgrp: 36214
[2026-02-03 19:07:33] 2026-02-04 00:06:57,639 | INFO     | corecount: 8
[2026-02-03 19:07:33] 2026-02-04 00:06:57,639 | INFO     | event service: False
[2026-02-03 19:07:33] 2026-02-04 00:06:57,639 | INFO     | sizes: {0: 2277194, 1: 2277879, 3: 2277879, 4: 2278368, 68495: 2333520, 68497: 2333519, 68504: 2342701, 68509: 2342785, 68511: 2343075}
[2026-02-03 19:07:33] 2026-02-04 00:06:57,640 | INFO     | --------------------------------------------------
[2026-02-03 19:07:33] 2026-02-04 00:06:57,640 | INFO     | 
[2026-02-03 19:07:33] 2026-02-04 00:06:57,640 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-02-03 19:07:33] 2026-02-04 00:06:57,653 | INFO     | number of running child processes to parent process 36214: 1
[2026-02-03 19:07:33] 2026-02-04 00:06:57,654 | INFO     | maximum number of monitored processes: 6
[2026-02-03 19:07:33] 2026-02-04 00:06:57,655 | INFO     | aborting job monitoring since job object (job id=6993667651) has expired
[2026-02-03 19:07:33] 2026-02-04 00:06:57,777 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-03 19:07:33] 2026-02-04 00:06:57,777 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-03 19:07:33] 2026-02-04 00:06:57,778 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-03 19:07:33] 2026-02-04 00:06:57,778 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-03 19:07:33] 2026-02-04 00:06:57,778 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-03 19:07:33] 2026-02-04 00:06:57,778 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-03 19:07:33] 2026-02-04 00:06:57,778 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-03 19:07:33] 2026-02-04 00:06:57,778 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-03 19:07:33] 2026-02-04 00:06:57,779 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-03 19:07:33] 2026-02-04 00:06:57,779 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-03 19:07:33] 2026-02-04 00:06:57,779 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-03 19:07:33] 2026-02-04 00:06:57,779 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-03 19:07:33] 2026-02-04 00:06:57,779 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-03 19:07:33] 2026-02-04 00:06:57,780 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-03 19:07:33] 2026-02-04 00:06:57,780 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-03 19:07:33] 2026-02-04 00:06:57,780 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-03 19:07:33] 2026-02-04 00:06:57,780 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-03 19:07:33] 2026-02-04 00:06:57,780 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-03 19:07:33] 2026-02-04 00:06:57,780 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-03 19:07:33] 2026-02-04 00:06:57,810 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-03 19:07:33] 2026-02-04 00:06:57,810 | INFO     | job 6993667651 has completed (purged errors)
[2026-02-03 19:07:33] 2026-02-04 00:06:57,811 | INFO     | overall cleanup function is called
[2026-02-03 19:07:33] 2026-02-04 00:06:58,856 | INFO     | --- collectZombieJob: --- 10, [36214]
[2026-02-03 19:07:33] 2026-02-04 00:06:58,856 | INFO     | zombie collector waiting for pid 36214
[2026-02-03 19:07:33] 2026-02-04 00:06:58,856 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-03 19:07:33] 2026-02-04 00:06:58,856 | INFO     | collected zombie processes
[2026-02-03 19:07:33] 2026-02-04 00:06:58,856 | INFO     | will attempt to kill all subprocesses of pid=36214
[2026-02-03 19:07:33] 2026-02-04 00:07:00,446 | INFO     | process IDs to be killed: [36214] (in reverse order)
[2026-02-03 19:07:33] 2026-02-04 00:07:00,596 | WARNING  | found no corresponding commands to process id(s)
[2026-02-03 19:07:33] 2026-02-04 00:07:00,596 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-03 19:07:33] 2026-02-04 00:07:00,624 | INFO     | did not find any defunct processes belonging to 36214
[2026-02-03 19:07:33] 2026-02-04 00:07:00,651 | INFO     | did not find any defunct processes belonging to 36214
[2026-02-03 19:07:33] 2026-02-04 00:07:00,651 | INFO     | ready for new job
[2026-02-03 19:07:33] 2026-02-04 00:07:00,651 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-03 19:07:33] 2026-02-04 00:07:00,689 | INFO     | **************************************
[2026-02-03 19:07:33] 2026-02-04 00:07:00,691 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-03 19:07:33] 2026-02-04 00:07:00,691 | INFO     | **************************************
[2026-02-03 19:07:33] 2026-02-04 00:07:00,691 | INFO     | 
[2026-02-03 19:07:33] 2026-02-04 00:07:00,693 | INFO     | architecture information:
[2026-02-03 19:07:33] 2026-02-04 00:07:00,733 | INFO     | executing command: cat /etc/os-release
[2026-02-03 19:07:33] 2026-02-04 00:07:00,767 | INFO     | cat /etc/os-release:
[2026-02-03 19:07:33] NAME="CentOS Linux"
[2026-02-03 19:07:33] VERSION="7 (Core)"
[2026-02-03 19:07:33] ID="centos"
[2026-02-03 19:07:33] ID_LIKE="rhel fedora"
[2026-02-03 19:07:33] VERSION_ID="7"
[2026-02-03 19:07:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-03 19:07:33] ANSI_COLOR="0;31"
[2026-02-03 19:07:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-03 19:07:33] HOME_URL="https://www.centos.org/"
[2026-02-03 19:07:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-03 19:07:33] 
[2026-02-03 19:07:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-03 19:07:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-03 19:07:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-03 19:07:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-03 19:07:33] 
[2026-02-03 19:07:33] 2026-02-04 00:07:00,768 | INFO     | **************************************
[2026-02-03 19:07:33] 2026-02-04 00:07:01,271 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-02-03 19:07:33] 2026-02-04 00:07:01,328 | INFO     | sufficient remaining disk space (51214548992 B)
[2026-02-03 19:07:33] 2026-02-04 00:07:01,329 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-03 19:07:33] 2026-02-04 00:07:01,329 | INFO     | current server update state: UPDATING_FINAL
[2026-02-03 19:07:33] 2026-02-04 00:07:01,330 | INFO     | update_server=False
[2026-02-03 19:07:33] 2026-02-04 00:07:01,330 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-03 19:07:33] 2026-02-04 00:07:01,331 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-03 19:07:33] 2026-02-04 00:07:01,331 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-03 19:07:33] 2026-02-04 00:07:01,331 | INFO     | aborting loop
[2026-02-03 19:07:33] 2026-02-04 00:07:01,331 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-03 19:07:33] 2026-02-04 00:07:01,451 | INFO     | all payload control threads have been joined
[2026-02-03 19:07:33] 2026-02-04 00:07:01,708 | INFO     | all data control threads have been joined
[2026-02-03 19:07:33] 2026-02-04 00:07:01,876 | INFO     | all job control threads have been joined
[2026-02-03 19:07:33] 2026-02-04 00:07:02,336 | INFO     | [job] retrieve thread has finished
[2026-02-03 19:07:33] 2026-02-04 00:07:02,340 | INFO     | [job] job monitor thread has finished
[2026-02-03 19:07:33] 2026-02-04 00:07:02,419 | INFO     | [data] copytool_in thread has finished
[2026-02-03 19:07:33] 2026-02-04 00:07:02,420 | INFO     | [job] validate thread has finished
[2026-02-03 19:07:33] 2026-02-04 00:07:02,457 | INFO     | [payload] control thread has finished
[2026-02-03 19:07:33] 2026-02-04 00:07:02,475 | INFO     | [payload] execute_payloads thread has finished
[2026-02-03 19:07:33] 2026-02-04 00:07:02,696 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-03 19:07:33] 2026-02-04 00:07:02,720 | INFO     | [data] control thread has finished
[2026-02-03 19:07:33] 2026-02-04 00:07:02,883 | INFO     | [job] control thread has finished
[2026-02-03 19:07:33] 2026-02-04 00:07:03,273 | INFO     | [job] create_data_payload thread has finished
[2026-02-03 19:07:33] 2026-02-04 00:07:03,340 | INFO     | [data] copytool_out thread has finished
[2026-02-03 19:07:33] 2026-02-04 00:07:03,369 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-03 19:07:33] 2026-02-04 00:07:03,414 | INFO     | [payload] validate_pre thread has finished
[2026-02-03 19:07:33] 2026-02-04 00:07:03,468 | INFO     | [payload] failed_post thread has finished
[2026-02-03 19:07:33] 2026-02-04 00:07:03,702 | INFO     | [job] queue monitor thread has finished
[2026-02-03 19:07:33] 2026-02-04 00:07:03,727 | INFO     | [payload] validate_post thread has finished
[2026-02-03 19:07:33] 2026-02-04 00:07:05,347 | INFO     | [data] queue_monitor thread has finished
[2026-02-03 19:07:33] 2026-02-04 00:07:08,135 | INFO     | [monitor] cgroup control has ended
[2026-02-03 19:07:33] 2026-02-04 00:07:09,024 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140164689499968)>', '<ExcThread(monitor, started 140163875321600)>']
[2026-02-03 19:07:33] 2026-02-04 00:07:14,050 | INFO     | all workflow threads have been joined
[2026-02-03 19:07:33] 2026-02-04 00:07:14,051 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-03 19:07:33] 2026-02-04 00:07:14,052 | INFO     | traces error code: 0
[2026-02-03 19:07:33] 2026-02-04 00:07:14,052 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-03 19:07:33] 2026-02-04 00:07:32,259 | INFO     | PID=13066 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-03 19:07:33] 2026-02-04 00:07:32,260 | INFO     | .. there are 35 such processes running
[2026-02-03 19:07:33] 2026-02-04 00:07:32,260 | INFO     | found 0 job(s) in 20 queues
[2026-02-03 19:07:33] 2026-02-04 00:07:32,261 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-03 19:07:33] 2026-02-04 00:07:32,261 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-03 19:07:33] 2026-02-04 00:07:32,261 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-03 19:07:33] 2026-02-04 00:07:32,261 | INFO     | [monitor] control thread has ended
[2026-02-03 19:07:33] 2026-02-04 00:07:32,599 [wrapper] ==== pilot stdout END ====
[2026-02-03 19:07:33] 2026-02-04 00:07:32,627 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-03 19:07:33] 2026-02-04 00:07:32,656 [wrapper] pilotpid: 13066
[2026-02-03 19:07:33] 2026-02-04 00:07:32,671 [wrapper] Pilot exit status: 0
[2026-02-03 19:07:33] 2026-02-04 00:07:32,759 [wrapper] pandaids: 6993667651
[2026-02-03 19:07:33] 2026-02-04 00:07:33,127 [wrapper] cleanup supervisor_pilot 3035598 13067
[2026-02-03 19:07:33] 2026-02-04 00:07:33,131 [wrapper] Test setup, not cleaning
[2026-02-03 19:07:33] 2026-02-04 00:07:33,134 [wrapper] apfmon messages muted
[2026-02-03 19:07:33] 2026-02-04 00:07:33,137 [wrapper] ==== wrapper stdout END ====
[2026-02-03 19:07:33] 2026-02-04 00:07:33,140 [wrapper] ==== wrapper stderr END ====
[2026-02-03 19:07:33]  *** Error codes and diagnostics ***
[2026-02-03 19:07:33]     "exeErrorCode": 0,
[2026-02-03 19:07:33]     "exeErrorDiag": "",
[2026-02-03 19:07:33]     "pilotErrorCode": 0,
[2026-02-03 19:07:33]     "pilotErrorDiag": "",
[2026-02-03 19:07:33]  *** Listing of results directory ***
[2026-02-03 19:07:33] total 692856
[2026-02-03 19:07:33] -rw-r--r--. 1 boincer umatlas    584422 Feb  2 19:37 pilot3.tar.gz
[2026-02-03 19:07:33] -rwx------. 1 boincer umatlas     36322 Feb  2 19:38 runpilot2-wrapper.sh
[2026-02-03 19:07:33] -rw-r--r--. 1 boincer umatlas      5111 Feb  2 19:40 queuedata.json
[2026-02-03 19:07:33] -rw-r--r--. 1 boincer umatlas       100 Feb  3 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-03 19:07:33] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  3 00:03 run_atlas
[2026-02-03 19:07:33] -rw-r--r--. 1 boincer umatlas       105 Feb  3 00:03 job.xml
[2026-02-03 19:07:33] -rw-r--r--. 2 boincer umatlas 497771507 Feb  3 00:03 EVNT.48318040._000111.pool.root.1
[2026-02-03 19:07:33] -rw-r--r--. 2 boincer umatlas     15845 Feb  3 00:03 start_atlas.sh
[2026-02-03 19:07:33] drwxrwx--x. 2 boincer umatlas      4096 Feb  3 00:03 shared
[2026-02-03 19:07:33] -rw-r--r--. 2 boincer umatlas    597769 Feb  3 00:03 input.tar.gz
[2026-02-03 19:07:33] -rw-r--r--. 1 boincer umatlas         0 Feb  3 00:03 boinc_lockfile
[2026-02-03 19:07:33] -rw-r--r--. 1 boincer umatlas      2535 Feb  3 00:03 pandaJob.out
[2026-02-03 19:07:33] -rw-------. 1 boincer umatlas        57 Feb  3 00:03 setup.sh.local
[2026-02-03 19:07:33] -rw-------. 1 boincer umatlas   1009324 Feb  3 00:04 agis_schedconf.cvmfs.json
[2026-02-03 19:07:33] -rw-------. 1 boincer umatlas       441 Feb  3 00:04 workernode_map.json
[2026-02-03 19:07:33] drwx------. 5 boincer umatlas      4096 Feb  3 00:05 pilot3
[2026-02-03 19:07:33] -rw-r--r--. 1 boincer umatlas      6524 Feb  3 19:03 init_data.xml
[2026-02-03 19:07:33] -rw-------. 1 boincer umatlas 189213301 Feb  3 19:05 HITS.48318042._005776.pool.root.1
[2026-02-03 19:07:33] -rw-r--r--. 1 boincer umatlas       532 Feb  3 19:05 boinc_task_state.xml
[2026-02-03 19:07:33] -rw-------. 1 boincer umatlas        95 Feb  3 19:06 pilot_heartbeat.json
[2026-02-03 19:07:33] -rw-------. 1 boincer umatlas      1041 Feb  3 19:06 memory_monitor_summary.json
[2026-02-03 19:07:33] -rw-------. 1 boincer umatlas   1511668 Feb  3 19:06 agis_ddmendpoints.agis.ALL.json
[2026-02-03 19:07:33] -rw-------. 1 boincer umatlas   1121560 Feb  3 19:06 log.48318042._005776.job.log.tgz.1
[2026-02-03 19:07:33] -rw-------. 1 boincer umatlas      6382 Feb  3 19:06 heartbeat.json
[2026-02-03 19:07:33] -rw-r--r--. 1 boincer umatlas        28 Feb  3 19:07 wrapper_checkpoint.txt
[2026-02-03 19:07:33] -rw-r--r--. 1 boincer umatlas      8192 Feb  3 19:07 boinc_mmap_file
[2026-02-03 19:07:33] -rw-------. 1 boincer umatlas       821 Feb  3 19:07 pilotlog.txt
[2026-02-03 19:07:33] -rw-------. 1 boincer umatlas   8155402 Feb  3 19:07 log.48318042._005776.job.log.1
[2026-02-03 19:07:33] -rw-------. 1 boincer umatlas       357 Feb  3 19:07 output.list
[2026-02-03 19:07:33] -rw-r--r--. 1 boincer umatlas       620 Feb  3 19:07 runtime_log
[2026-02-03 19:07:33] -rw-------. 1 boincer umatlas   9297920 Feb  3 19:07 result.tar.gz
[2026-02-03 19:07:33] -rw-r--r--. 1 boincer umatlas      9337 Feb  3 19:07 runtime_log.err
[2026-02-03 19:07:33] -rw-------. 1 boincer umatlas       657 Feb  3 19:07 OfQKDmgcJ78nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmKnTKDmj7c1Sn.diag
[2026-02-03 19:07:33] -rw-r--r--. 1 boincer umatlas     21389 Feb  3 19:07 stderr.txt
[2026-02-03 19:07:33] HITS file was successfully produced:
[2026-02-03 19:07:33] -rw-------. 1 boincer umatlas 189213301 Feb  3 19:05 shared/HITS.pool.root.1
[2026-02-03 19:07:33]  *** Contents of shared directory: ***
[2026-02-03 19:07:33] total 680576
[2026-02-03 19:07:33] -rw-r--r--. 2 boincer umatlas 497771507 Feb  3 00:03 ATLAS.root_0
[2026-02-03 19:07:33] -rw-r--r--. 2 boincer umatlas     15845 Feb  3 00:03 start_atlas.sh
[2026-02-03 19:07:33] -rw-r--r--. 2 boincer umatlas    597769 Feb  3 00:03 input.tar.gz
[2026-02-03 19:07:33] -rw-------. 1 boincer umatlas 189213301 Feb  3 19:05 HITS.pool.root.1
[2026-02-03 19:07:33] -rw-------. 1 boincer umatlas   9297920 Feb  3 19:07 result.tar.gz
19:07:34 (5283): run_atlas exited; CPU time 91610.301126
19:07:34 (5283): called boinc_finish(0)

</stderr_txt>
]]>

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