Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
04:24:19 (4726): wrapper (7.7.26015): starting
04:24:19 (4726): wrapper: running run_atlas (--nthreads 4)
[2026-02-03 04:24:19] Arguments: --nthreads 4
[2026-02-03 04:24:19] Threads: 4
[2026-02-03 04:24:19] Checking for CVMFS
[2026-02-03 04:24:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-03 04:24:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-03 04:24:27] Running cvmfs_config stat atlas.cern.ch
[2026-02-03 04:24:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-03 04:24:27] 2.11.5.0 4934 0 25460 155817 3 1 2767089 4096000 0 130560 0 0 0.000 1336 732 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2026-02-03 04:24:27] CVMFS is ok
[2026-02-03 04:24:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 04:24:27] Checking for apptainer binary...
[2026-02-03 04:24:27] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-03 04:24:27] Running /usr/bin/apptainer --version
[2026-02-03 04:24:28] apptainer version 1.0.3
[2026-02-03 04:24:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 04:24:29] TeeC28
[2026-02-03 04:24:29] apptainer works
[2026-02-03 04:24:29] Set ATHENA_PROC_NUMBER=4
[2026-02-03 04:24:29] Set ATHENA_CORE_NUMBER=4
[2026-02-03 04:24:29] Starting ATLAS job with PandaID=6997548200
[2026-02-03 04:24:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/users/jmp/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-03 08:05:20]  *** The last 200 lines of the pilot log: ***
[2026-02-03 08:05:20] 2026-02-03 08:04:41,875 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-03 08:05:20] 2026-02-03 08:04:41,968 | INFO     | time since job start (13189s) is within the limit (349056.0s)
[2026-02-03 08:05:20] 2026-02-03 08:04:41,982 | INFO     | job 6997548200 has state=finished
[2026-02-03 08:05:20] 2026-02-03 08:04:41,983 | INFO     | preparing for final server update for job 6997548200 in state='finished'
[2026-02-03 08:05:20] 2026-02-03 08:04:41,983 | INFO     | reading metadata from: /home/m/users/jmp/BOINC/slots/0/PanDA_Pilot-6997548200/jobReport.json
[2026-02-03 08:05:20] 2026-02-03 08:04:41,985 | INFO     | added worker_node to metadata from /home/m/users/jmp/BOINC/slots/0/workernode_map.json
[2026-02-03 08:05:20] 2026-02-03 08:04:41,985 | INFO     | this job has now completed (state=finished)
[2026-02-03 08:05:20] 2026-02-03 08:04:41,985 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-03 08:05:20] 2026-02-03 08:04:41,985 | INFO     | log transfer has been attempted: DONE
[2026-02-03 08:05:20] 2026-02-03 08:04:41,985 | INFO     | job 6997548200 has finished - writing final server update
[2026-02-03 08:05:20] 2026-02-03 08:04:41,986 | INFO     | total number of processed events: 400 (read)
[2026-02-03 08:05:20] 2026-02-03 08:04:42,006 | INFO     | using path: /home/m/users/jmp/BOINC/slots/0/PanDA_Pilot-6997548200/memory_monitor_summary.json (trf name=prmon)
[2026-02-03 08:05:20] 2026-02-03 08:04:42,008 | INFO     | extracted standard info from prmon json
[2026-02-03 08:05:20] 2026-02-03 08:04:42,008 | INFO     | extracted standard memory fields from prmon json
[2026-02-03 08:05:20] 2026-02-03 08:04:42,008 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-03 08:05:20] 2026-02-03 08:04:42,009 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-03 08:05:20] 2026-02-03 08:04:42,009 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-03 08:05:20] 2026-02-03 08:04:42,021 | INFO     | fitting pss+swap vs Time
[2026-02-03 08:05:20] 2026-02-03 08:04:42,022 | INFO     | sum of square deviations: 3124858590.0
[2026-02-03 08:05:20] 2026-02-03 08:04:42,026 | INFO     | sum of deviations: -53982643600.500015
[2026-02-03 08:05:20] 2026-02-03 08:04:42,026 | INFO     | mean x: 1770099270.5
[2026-02-03 08:05:20] 2026-02-03 08:04:42,027 | INFO     | mean y: 2442342.578703704
[2026-02-03 08:05:20] 2026-02-03 08:04:42,027 | INFO     | intersect: 30581310251.256317
[2026-02-03 08:05:20] 2026-02-03 08:04:42,027 | INFO     | chi2: 2.037455164428784
[2026-02-03 08:05:20] 2026-02-03 08:04:42,028 | INFO     | sum of square deviations: 2912836010.0
[2026-02-03 08:05:20] 2026-02-03 08:04:42,031 | INFO     | sum of deviations: -52170791314.000015
[2026-02-03 08:05:20] 2026-02-03 08:04:42,031 | INFO     | mean x: 1770099118.0
[2026-02-03 08:05:20] 2026-02-03 08:04:42,031 | INFO     | mean y: 2443646.2748815166
[2026-02-03 08:05:20] 2026-02-03 08:04:42,032 | INFO     | intersect: 31706072471.66608
[2026-02-03 08:05:20] 2026-02-03 08:04:42,032 | INFO     | chi2: 2.030742608074486
[2026-02-03 08:05:20] 2026-02-03 08:04:42,032 | INFO     | current chi2=2.030742608074486 (change=0.32945786839829344 %)
[2026-02-03 08:05:20] 2026-02-03 08:04:42,032 | INFO     | right removable region: 210
[2026-02-03 08:05:20] 2026-02-03 08:04:42,033 | INFO     | sum of square deviations: 2912836010.0
[2026-02-03 08:05:20] 2026-02-03 08:04:42,036 | INFO     | sum of deviations: -86849757293.0
[2026-02-03 08:05:20] 2026-02-03 08:04:42,036 | INFO     | mean x: 1770099423.0
[2026-02-03 08:05:20] 2026-02-03 08:04:42,036 | INFO     | mean y: 2465733.5829383885
[2026-02-03 08:05:20] 2026-02-03 08:04:42,036 | INFO     | intersect: 52780138333.1569
[2026-02-03 08:05:20] 2026-02-03 08:04:42,036 | INFO     | chi2: 0.4580672744994859
[2026-02-03 08:05:20] 2026-02-03 08:04:42,036 | INFO     | current chi2=0.4580672744994859 (change=77.51767584893537 %)
[2026-02-03 08:05:20] 2026-02-03 08:04:42,037 | INFO     | sum of square deviations: 2710627567.5
[2026-02-03 08:05:20] 2026-02-03 08:04:42,039 | INFO     | sum of deviations: -79158350008.99998
[2026-02-03 08:05:20] 2026-02-03 08:04:42,039 | INFO     | mean x: 1770099575.5
[2026-02-03 08:05:20] 2026-02-03 08:04:42,039 | INFO     | mean y: 2459913.9223300973
[2026-02-03 08:05:20] 2026-02-03 08:04:42,040 | INFO     | intersect: 51694608045.30199
[2026-02-03 08:05:20] 2026-02-03 08:04:42,040 | INFO     | chi2: 0.45295458157662144
[2026-02-03 08:05:20] 2026-02-03 08:04:42,040 | INFO     | current chi2=0.45295458157662144 (change=1.1161445506996635 %)
[2026-02-03 08:05:20] 2026-02-03 08:04:42,040 | INFO     | left removable region: 20
[2026-02-03 08:05:20] 2026-02-03 08:04:42,040 | INFO     | sum of square deviations: 2126802667.5
[2026-02-03 08:05:20] 2026-02-03 08:04:42,042 | INFO     | sum of deviations: -57072544554.5
[2026-02-03 08:05:20] 2026-02-03 08:04:42,042 | INFO     | mean x: 1770099697.5
[2026-02-03 08:05:20] 2026-02-03 08:04:42,042 | INFO     | mean y: 2445386.352631579
[2026-02-03 08:05:20] 2026-02-03 08:04:42,043 | INFO     | intersect: 47502900127.75413
[2026-02-03 08:05:20] 2026-02-03 08:04:42,043 | INFO     | chi2: 0.4071997641417035
[2026-02-03 08:05:20] 2026-02-03 08:04:42,043 | INFO     | current memory leak: -26.83 B/s (using 190 data points, chi2=0.41)
[2026-02-03 08:05:20] 2026-02-03 08:04:42,043 | INFO     | could have reported an average CPU frequency of 3199 MHz (11 samples)
[2026-02-03 08:05:20] 2026-02-03 08:04:42,044 | INFO     | ..............................
[2026-02-03 08:05:20] 2026-02-03 08:04:42,044 | INFO     | . Timing measurements:
[2026-02-03 08:05:20] 2026-02-03 08:04:42,044 | INFO     | . get job = 0 s
[2026-02-03 08:05:20] 2026-02-03 08:04:42,044 | INFO     | . initial setup = 6 s
[2026-02-03 08:05:20] 2026-02-03 08:04:42,044 | INFO     | . payload setup = 5 s
[2026-02-03 08:05:20] 2026-02-03 08:04:42,044 | INFO     | . stage-in = 0 s
[2026-02-03 08:05:20] 2026-02-03 08:04:42,044 | INFO     | . payload execution = 13163 s
[2026-02-03 08:05:20] 2026-02-03 08:04:42,044 | INFO     | . stage-out = 1 s
[2026-02-03 08:05:20] 2026-02-03 08:04:42,044 | INFO     | . log creation = 0 s
[2026-02-03 08:05:20] 2026-02-03 08:04:42,044 | INFO     | ..............................
[2026-02-03 08:05:20] 2026-02-03 08:04:42,141 | INFO     | 
[2026-02-03 08:05:20] 2026-02-03 08:04:42,141 | INFO     | job summary report
[2026-02-03 08:05:20] 2026-02-03 08:04:42,142 | INFO     | --------------------------------------------------
[2026-02-03 08:05:20] 2026-02-03 08:04:42,142 | INFO     | PanDA job id: 6997548200
[2026-02-03 08:05:20] 2026-02-03 08:04:42,142 | INFO     | task id: 48431080
[2026-02-03 08:05:20] 2026-02-03 08:04:42,142 | INFO     | errors: (none)
[2026-02-03 08:05:20] 2026-02-03 08:04:42,142 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-03 08:05:20] 2026-02-03 08:04:42,142 | INFO     | pilot state: finished 
[2026-02-03 08:05:20] 2026-02-03 08:04:42,142 | INFO     | transexitcode: 0
[2026-02-03 08:05:20] 2026-02-03 08:04:42,142 | INFO     | exeerrorcode: 0
[2026-02-03 08:05:20] 2026-02-03 08:04:42,142 | INFO     | exeerrordiag: 
[2026-02-03 08:05:20] 2026-02-03 08:04:42,142 | INFO     | exitcode: 0
[2026-02-03 08:05:20] 2026-02-03 08:04:42,142 | INFO     | exitmsg: OK
[2026-02-03 08:05:20] 2026-02-03 08:04:42,142 | INFO     | cpuconsumptiontime: 50783 s
[2026-02-03 08:05:20] 2026-02-03 08:04:42,142 | INFO     | nevents: 400
[2026-02-03 08:05:20] 2026-02-03 08:04:42,142 | INFO     | neventsw: 0
[2026-02-03 08:05:20] 2026-02-03 08:04:42,143 | INFO     | pid: 13359
[2026-02-03 08:05:20] 2026-02-03 08:04:42,143 | INFO     | pgrp: 13359
[2026-02-03 08:05:20] 2026-02-03 08:04:42,143 | INFO     | corecount: 4
[2026-02-03 08:05:20] 2026-02-03 08:04:42,143 | INFO     | event service: False
[2026-02-03 08:05:20] 2026-02-03 08:04:42,143 | INFO     | sizes: {0: 2278323, 11: 2278323, 13172: 2308499, 13173: 2308498, 13175: 2317570, 13178: 2317948}
[2026-02-03 08:05:20] 2026-02-03 08:04:42,143 | INFO     | --------------------------------------------------
[2026-02-03 08:05:20] 2026-02-03 08:04:42,143 | INFO     | 
[2026-02-03 08:05:20] 2026-02-03 08:04:42,143 | INFO     | executing command: ls -lF /home/m/users/jmp/BOINC/slots/0
[2026-02-03 08:05:20] 2026-02-03 08:04:42,152 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-03 08:05:20] 2026-02-03 08:04:42,152 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-03 08:05:20] 2026-02-03 08:04:42,152 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-03 08:05:20] 2026-02-03 08:04:42,152 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-03 08:05:20] 2026-02-03 08:04:42,152 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-03 08:05:20] 2026-02-03 08:04:42,152 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-03 08:05:20] 2026-02-03 08:04:42,152 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-03 08:05:20] 2026-02-03 08:04:42,152 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-03 08:05:20] 2026-02-03 08:04:42,152 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-03 08:05:20] 2026-02-03 08:04:42,153 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-03 08:05:20] 2026-02-03 08:04:42,153 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-03 08:05:20] 2026-02-03 08:04:42,153 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-03 08:05:20] 2026-02-03 08:04:42,153 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-03 08:05:20] 2026-02-03 08:04:42,153 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-03 08:05:20] 2026-02-03 08:04:42,153 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-03 08:05:20] 2026-02-03 08:04:42,153 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-03 08:05:20] 2026-02-03 08:04:42,153 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-03 08:05:20] 2026-02-03 08:04:42,153 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-03 08:05:20] 2026-02-03 08:04:42,153 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-03 08:05:20] 2026-02-03 08:04:42,153 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-03 08:05:20] 2026-02-03 08:04:42,153 | INFO     | job 6997548200 has completed (purged errors)
[2026-02-03 08:05:20] 2026-02-03 08:04:42,154 | INFO     | overall cleanup function is called
[2026-02-03 08:05:20] 2026-02-03 08:04:43,160 | INFO     | --- collectZombieJob: --- 10, [13359]
[2026-02-03 08:05:20] 2026-02-03 08:04:43,161 | INFO     | zombie collector waiting for pid 13359
[2026-02-03 08:05:20] 2026-02-03 08:04:43,161 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-03 08:05:20] 2026-02-03 08:04:43,161 | INFO     | collected zombie processes
[2026-02-03 08:05:20] 2026-02-03 08:04:43,162 | INFO     | will attempt to kill all subprocesses of pid=13359
[2026-02-03 08:05:20] 2026-02-03 08:04:43,236 | INFO     | process IDs to be killed: [13359] (in reverse order)
[2026-02-03 08:05:20] 2026-02-03 08:04:43,261 | WARNING  | found no corresponding commands to process id(s)
[2026-02-03 08:05:20] 2026-02-03 08:04:43,261 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-03 08:05:20] 2026-02-03 08:04:43,263 | INFO     | did not find any defunct processes belonging to 13359
[2026-02-03 08:05:20] 2026-02-03 08:04:43,265 | INFO     | did not find any defunct processes belonging to 13359
[2026-02-03 08:05:20] 2026-02-03 08:04:43,265 | INFO     | ready for new job
[2026-02-03 08:05:20] 2026-02-03 08:04:43,265 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-03 08:05:20] 2026-02-03 08:04:43,266 | INFO     | **************************************
[2026-02-03 08:05:20] 2026-02-03 08:04:43,266 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-03 08:05:20] 2026-02-03 08:04:43,266 | INFO     | **************************************
[2026-02-03 08:05:20] 2026-02-03 08:04:43,267 | INFO     | 
[2026-02-03 08:05:20] 2026-02-03 08:04:43,287 | INFO     | architecture information:
[2026-02-03 08:05:20] 2026-02-03 08:04:43,288 | INFO     | executing command: cat /etc/os-release
[2026-02-03 08:05:20] 2026-02-03 08:04:43,295 | INFO     | cat /etc/os-release:
[2026-02-03 08:05:20] NAME="CentOS Linux"
[2026-02-03 08:05:20] VERSION="7 (Core)"
[2026-02-03 08:05:20] ID="centos"
[2026-02-03 08:05:20] ID_LIKE="rhel fedora"
[2026-02-03 08:05:20] VERSION_ID="7"
[2026-02-03 08:05:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-03 08:05:20] ANSI_COLOR="0;31"
[2026-02-03 08:05:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-03 08:05:20] HOME_URL="https://www.centos.org/"
[2026-02-03 08:05:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-03 08:05:20] 
[2026-02-03 08:05:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-03 08:05:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-03 08:05:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-03 08:05:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-03 08:05:20] 
[2026-02-03 08:05:20] 2026-02-03 08:04:43,295 | INFO     | **************************************
[2026-02-03 08:05:20] 2026-02-03 08:04:43,799 | INFO     | executing command: df -mP /home/m/users/jmp/BOINC/slots/0
[2026-02-03 08:05:20] 2026-02-03 08:04:43,809 | INFO     | sufficient remaining disk space (413085466624 B)
[2026-02-03 08:05:20] 2026-02-03 08:04:43,810 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-03 08:05:20] 2026-02-03 08:04:43,810 | INFO     | current server update state: UPDATING_FINAL
[2026-02-03 08:05:20] 2026-02-03 08:04:43,810 | INFO     | update_server=False
[2026-02-03 08:05:20] 2026-02-03 08:04:43,810 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-03 08:05:20] 2026-02-03 08:04:43,810 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-02-03 08:05:20] 2026-02-03 08:04:43,811 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-03 08:05:20] 2026-02-03 08:04:43,811 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-03 08:05:20] 2026-02-03 08:04:43,811 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-03 08:05:20] 2026-02-03 08:04:43,811 | INFO     | found 0 job(s) in 20 queues
[2026-02-03 08:05:20] 2026-02-03 08:04:43,812 | INFO     | aborting loop
[2026-02-03 08:05:20] 2026-02-03 08:04:43,812 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-03 08:05:20] 2026-02-03 08:04:43,812 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-03 08:05:20] 2026-02-03 08:04:44,050 | INFO     | all payload control threads have been joined
[2026-02-03 08:05:20] 2026-02-03 08:04:44,153 | INFO     | all data control threads have been joined
[2026-02-03 08:05:20] 2026-02-03 08:04:44,756 | INFO     | all job control threads have been joined
[2026-02-03 08:05:20] 2026-02-03 08:04:44,816 | INFO     | [job] retrieve thread has finished
[2026-02-03 08:05:20] 2026-02-03 08:04:44,817 | INFO     | [job] job monitor thread has finished
[2026-02-03 08:05:20] 2026-02-03 08:04:44,818 | INFO     | [job] queue monitor thread has finished
[2026-02-03 08:05:20] 2026-02-03 08:04:44,839 | INFO     | [data] copytool_in thread has finished
[2026-02-03 08:05:20] 2026-02-03 08:04:44,959 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-03 08:05:20] 2026-02-03 08:04:45,019 | INFO     | [payload] failed_post thread has finished
[2026-02-03 08:05:20] 2026-02-03 08:04:45,056 | INFO     | [payload] control thread has finished
[2026-02-03 08:05:20] 2026-02-03 08:04:45,159 | INFO     | [data] control thread has finished
[2026-02-03 08:05:20] 2026-02-03 08:04:45,536 | INFO     | [job] validate thread has finished
[2026-02-03 08:05:20] 2026-02-03 08:04:45,610 | INFO     | [payload] validate_post thread has finished
[2026-02-03 08:05:20] 2026-02-03 08:04:45,763 | INFO     | [job] control thread has finished
[2026-02-03 08:05:20] 2026-02-03 08:04:45,940 | INFO     | [payload] validate_pre thread has finished
[2026-02-03 08:05:20] 2026-02-03 08:04:45,959 | INFO     | [job] create_data_payload thread has finished
[2026-02-03 08:05:20] 2026-02-03 08:04:46,080 | INFO     | [payload] execute_payloads thread has finished
[2026-02-03 08:05:20] 2026-02-03 08:04:46,965 | INFO     | [data] copytool_out thread has finished
[2026-02-03 08:05:20] 2026-02-03 08:04:47,819 | INFO     | [data] queue_monitor thread has finished
[2026-02-03 08:05:20] 2026-02-03 08:04:54,379 | INFO     | job.realtimelogging is not enabled
[2026-02-03 08:05:20] 2026-02-03 08:04:55,385 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-03 08:05:20] 2026-02-03 08:05:13,658 | INFO     | [monitor] cgroup control has ended
[2026-02-03 08:05:20] 2026-02-03 08:05:15,011 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139678527919936)>', '<ExcThread(monitor, started 139677956822784)>']
[2026-02-03 08:05:20] 2026-02-03 08:05:15,973 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-03 08:05:20] 2026-02-03 08:05:15,974 | INFO     | [monitor] control thread has ended
[2026-02-03 08:05:20] 2026-02-03 08:05:20,035 | INFO     | all workflow threads have been joined
[2026-02-03 08:05:20] 2026-02-03 08:05:20,035 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-03 08:05:20] 2026-02-03 08:05:20,036 | INFO     | traces error code: 0
[2026-02-03 08:05:20] 2026-02-03 08:05:20,036 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-03 08:05:20] 2026-02-03 08:05:20,145 [wrapper] ==== pilot stdout END ====
[2026-02-03 08:05:20] 2026-02-03 08:05:20,147 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-03 08:05:20] 2026-02-03 08:05:20,149 [wrapper] pilotpid: 8984
[2026-02-03 08:05:20] 2026-02-03 08:05:20,151 [wrapper] Pilot exit status: 0
[2026-02-03 08:05:20] 2026-02-03 08:05:20,172 [wrapper] pandaids: 6997548200
[2026-02-03 08:05:20] 2026-02-03 08:05:20,216 [wrapper] cleanup supervisor_pilot 19143 8985
[2026-02-03 08:05:20] 2026-02-03 08:05:20,219 [wrapper] Test setup, not cleaning
[2026-02-03 08:05:20] 2026-02-03 08:05:20,221 [wrapper] apfmon messages muted
[2026-02-03 08:05:20] 2026-02-03 08:05:20,223 [wrapper] ==== wrapper stdout END ====
[2026-02-03 08:05:20] 2026-02-03 08:05:20,225 [wrapper] ==== wrapper stderr END ====
[2026-02-03 08:05:20]  *** Error codes and diagnostics ***
[2026-02-03 08:05:20]     "exeErrorCode": 0,
[2026-02-03 08:05:20]     "exeErrorDiag": "",
[2026-02-03 08:05:20]     "pilotErrorCode": 0,
[2026-02-03 08:05:20]     "pilotErrorDiag": "",
[2026-02-03 08:05:20]  *** Listing of results directory ***
[2026-02-03 08:05:20] total 889576
[2026-02-03 08:05:20] -rwx------ 1 m m     36322 Feb  2 22:19 runpilot2-wrapper.sh
[2026-02-03 08:05:20] -rw-r--r-- 1 m m      5111 Feb  2 22:19 queuedata.json
[2026-02-03 08:05:20] -rw-r--r-- 1 m m    584422 Feb  2 22:19 pilot3.tar.gz
[2026-02-03 08:05:20] -rw-rw-r-- 1 m m       100 Feb  3 04:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-03 08:05:20] -rwxr-xr-x 1 m m      7986 Feb  3 04:24 run_atlas
[2026-02-03 08:05:20] -rw-rw-r-- 1 m m       105 Feb  3 04:24 job.xml
[2026-02-03 08:05:20] -rw-r--r-- 2 m m     15845 Feb  3 04:24 start_atlas.sh
[2026-02-03 08:05:20] drwxrwx--x 2 m m      4096 Feb  3 04:24 shared
[2026-02-03 08:05:20] -rw-r--r-- 2 m m    597771 Feb  3 04:24 input.tar.gz
[2026-02-03 08:05:20] -rw-rw-r-- 1 m m      6030 Feb  3 04:24 init_data.xml
[2026-02-03 08:05:20] -rw-r--r-- 2 m m 649288174 Feb  3 04:24 EVNT.48431078._000167.pool.root.1
[2026-02-03 08:05:20] -rw-rw-r-- 1 m m         0 Feb  3 04:24 boinc_lockfile
[2026-02-03 08:05:20] -rw-rw-r-- 1 m m      2557 Feb  3 04:24 pandaJob.out
[2026-02-03 08:05:20] -rw------- 1 m m   1009324 Feb  3 04:24 agis_schedconf.cvmfs.json
[2026-02-03 08:05:20] -rw------- 1 m m       416 Feb  3 04:24 workernode_map.json
[2026-02-03 08:05:20] drwx------ 5 m m      4096 Feb  3 04:24 pilot3
[2026-02-03 08:05:20] -rw------- 1 m m 253166525 Feb  3 08:04 HITS.48431080._008665.pool.root.1
[2026-02-03 08:05:20] -rw-rw-r-- 1 m m       531 Feb  3 08:04 boinc_task_state.xml
[2026-02-03 08:05:20] -rw------- 1 m m        95 Feb  3 08:04 pilot_heartbeat.json
[2026-02-03 08:05:20] -rw------- 1 m m      1028 Feb  3 08:04 memory_monitor_summary.json
[2026-02-03 08:05:20] -rw------- 1 m m   1511668 Feb  3 08:04 agis_ddmendpoints.agis.ALL.json
[2026-02-03 08:05:20] -rw------- 1 m m    395568 Feb  3 08:04 log.48431080._008665.job.log.tgz.1
[2026-02-03 08:05:20] -rw------- 1 m m      6332 Feb  3 08:04 heartbeat.json
[2026-02-03 08:05:20] -rw-rw-r-- 1 m m      8192 Feb  3 08:05 boinc_mmap_file
[2026-02-03 08:05:20] -rw-rw-r-- 1 m m        28 Feb  3 08:05 wrapper_checkpoint.txt
[2026-02-03 08:05:20] -rw------- 1 m m      4630 Feb  3 08:05 pilotlog.txt
[2026-02-03 08:05:20] -rw------- 1 m m   1865538 Feb  3 08:05 log.48431080._008665.job.log.1
[2026-02-03 08:05:20] -rw------- 1 m m       357 Feb  3 08:05 output.list
[2026-02-03 08:05:20] -rw-rw-r-- 1 m m       620 Feb  3 08:05 runtime_log
[2026-02-03 08:05:20] -rw------- 1 m m   2283520 Feb  3 08:05 result.tar.gz
[2026-02-03 08:05:20] -rw-rw-r-- 1 m m      8889 Feb  3 08:05 runtime_log.err
[2026-02-03 08:05:20] -rw------- 1 m m       645 Feb  3 08:05 1roNDmERH78nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmNeTKDmeQPCXo.diag
[2026-02-03 08:05:20] -rw-rw-r-- 1 m m     20864 Feb  3 08:05 stderr.txt
[2026-02-03 08:05:20] HITS file was successfully produced:
[2026-02-03 08:05:20] -rw------- 1 m m 253166525 Feb  3 08:04 shared/HITS.pool.root.1
[2026-02-03 08:05:20]  *** Contents of shared directory: ***
[2026-02-03 08:05:20] total 884148
[2026-02-03 08:05:20] -rw-r--r-- 2 m m     15845 Feb  3 04:24 start_atlas.sh
[2026-02-03 08:05:20] -rw-r--r-- 2 m m    597771 Feb  3 04:24 input.tar.gz
[2026-02-03 08:05:20] -rw-r--r-- 2 m m 649288174 Feb  3 04:24 ATLAS.root_0
[2026-02-03 08:05:20] -rw------- 1 m m 253166525 Feb  3 08:04 HITS.pool.root.1
[2026-02-03 08:05:20] -rw------- 1 m m   2283520 Feb  3 08:05 result.tar.gz
08:05:21 (4726): run_atlas exited; CPU time 50920.587488
08:05:21 (4726): called boinc_finish(0)

</stderr_txt>
]]>

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