Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:35:43 (31942): wrapper (7.7.26015): starting
14:35:43 (31942): wrapper: running run_atlas (--nthreads 8)
[2026-02-03 14:35:43] Arguments: --nthreads 8
[2026-02-03 14:35:43] Threads: 8
[2026-02-03 14:35:43] Checking for CVMFS
[2026-02-03 14:35:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-03 14:35:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-03 14:35:47] Running cvmfs_config stat atlas.cern.ch
[2026-02-03 14:35:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-03 14:35:49] 2.11.2.0 20181 71485 137068 155831 1 54 18855408 25165824 96 130560 0 22788134 99.845 16395207 2411 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-02-03 14:35:49] CVMFS is ok
[2026-02-03 14:35:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 14:35:49] Checking for apptainer binary...
[2026-02-03 14:35:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-03 14:35:49] Running /usr/bin/apptainer --version
[2026-02-03 14:35:49] apptainer version 1.3.2-1.el7
[2026-02-03 14:35:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 14:36:08] cg-vwn427.simple-grid.lan
[2026-02-03 14:36:08] apptainer works
[2026-02-03 14:36:08] Set ATHENA_PROC_NUMBER=8
[2026-02-03 14:36:08] Set ATHENA_CORE_NUMBER=8
[2026-02-03 14:36:08] Starting ATLAS job with PandaID=6983466828
[2026-02-03 14:36:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-03 19:04:12]  *** The last 200 lines of the pilot log: ***
[2026-02-03 19:04:12] 2026-02-03 18:03:00,964 | INFO     | total number of processed events: 400 (read)
[2026-02-03 19:04:12] 2026-02-03 18:03:00,966 | INFO     | using path: /var/lib/boinc/slots/15/PanDA_Pilot-6983466828/memory_monitor_summary.json (trf name=prmon)
[2026-02-03 19:04:12] 2026-02-03 18:03:00,967 | INFO     | extracted standard info from prmon json
[2026-02-03 19:04:12] 2026-02-03 18:03:00,967 | INFO     | extracted standard memory fields from prmon json
[2026-02-03 19:04:12] 2026-02-03 18:03:00,967 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-03 19:04:12] 2026-02-03 18:03:00,968 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-03 19:04:12] 2026-02-03 18:03:00,968 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-03 19:04:12] 2026-02-03 18:03:00,974 | INFO     | fitting pss+swap vs Time
[2026-02-03 19:04:12] 2026-02-03 18:03:00,974 | INFO     | sum of square deviations: 4962187923.0
[2026-02-03 19:04:12] 2026-02-03 18:03:00,977 | INFO     | sum of deviations: 129327200104.50002
[2026-02-03 19:04:12] 2026-02-03 18:03:00,977 | INFO     | mean x: 1770134098.5
[2026-02-03 19:04:12] 2026-02-03 18:03:00,977 | INFO     | mean y: 2422793.4325396824
[2026-02-03 19:04:12] 2026-02-03 18:03:00,977 | INFO     | intersect: -46131760417.852554
[2026-02-03 19:04:12] 2026-02-03 18:03:00,978 | INFO     | chi2: 8.821653853721708
[2026-02-03 19:04:12] 2026-02-03 18:03:00,978 | INFO     | sum of square deviations: 4672638308.0
[2026-02-03 19:04:12] 2026-02-03 18:03:00,981 | INFO     | sum of deviations: 143150343034.99997
[2026-02-03 19:04:12] 2026-02-03 18:03:00,981 | INFO     | mean x: 1770133946.0
[2026-02-03 19:04:12] 2026-02-03 18:03:00,981 | INFO     | mean y: 2429932.6153846155
[2026-02-03 19:04:12] 2026-02-03 18:03:00,981 | INFO     | intersect: -54227164759.950775
[2026-02-03 19:04:12] 2026-02-03 18:03:00,985 | INFO     | chi2: 8.128639118941692
[2026-02-03 19:04:12] 2026-02-03 18:03:00,985 | INFO     | current chi2=8.128639118941692 (change=7.855836856346896 %)
[2026-02-03 19:04:12] 2026-02-03 18:03:00,985 | INFO     | right removable region: 246
[2026-02-03 19:04:12] 2026-02-03 18:03:00,986 | INFO     | sum of square deviations: 4672638308.0
[2026-02-03 19:04:12] 2026-02-03 18:03:00,988 | INFO     | sum of deviations: 40880967555.999954
[2026-02-03 19:04:12] 2026-02-03 18:03:00,988 | INFO     | mean x: 1770134251.0
[2026-02-03 19:04:12] 2026-02-03 18:03:00,988 | INFO     | mean y: 2469352.95951417
[2026-02-03 19:04:12] 2026-02-03 18:03:00,989 | INFO     | intersect: -15484456044.411789
[2026-02-03 19:04:12] 2026-02-03 18:03:00,989 | INFO     | chi2: 3.651381507432505
[2026-02-03 19:04:12] 2026-02-03 18:03:00,989 | INFO     | current chi2=3.651381507432505 (change=58.608878017900814 %)
[2026-02-03 19:04:12] 2026-02-03 18:03:00,990 | INFO     | sum of square deviations: 4394577280.5
[2026-02-03 19:04:12] 2026-02-03 18:03:00,992 | INFO     | sum of deviations: -24831413289.0
[2026-02-03 19:04:12] 2026-02-03 18:03:00,992 | INFO     | mean x: 1770134403.5
[2026-02-03 19:04:12] 2026-02-03 18:03:00,992 | INFO     | mean y: 2505339.123966942
[2026-02-03 19:04:12] 2026-02-03 18:03:00,993 | INFO     | intersect: 10004591124.582027
[2026-02-03 19:04:12] 2026-02-03 18:03:00,993 | INFO     | chi2: 0.9849255749215989
[2026-02-03 19:04:12] 2026-02-03 18:03:00,993 | INFO     | current chi2=0.9849255749215989 (change=73.02594722253068 %)
[2026-02-03 19:04:12] 2026-02-03 18:03:00,994 | INFO     | sum of square deviations: 4127772278.0
[2026-02-03 19:04:12] 2026-02-03 18:03:00,996 | INFO     | sum of deviations: -34377414736.0
[2026-02-03 19:04:12] 2026-02-03 18:03:00,996 | INFO     | mean x: 1770134556.0
[2026-02-03 19:04:12] 2026-02-03 18:03:00,996 | INFO     | mean y: 2510755.3966244725
[2026-02-03 19:04:12] 2026-02-03 18:03:00,997 | INFO     | intersect: 14744760490.069902
[2026-02-03 19:04:12] 2026-02-03 18:03:00,997 | INFO     | chi2: 0.8945008010150417
[2026-02-03 19:04:12] 2026-02-03 18:03:00,997 | INFO     | current chi2=0.8945008010150417 (change=9.180873784677095 %)
[2026-02-03 19:04:12] 2026-02-03 18:03:00,997 | INFO     | left removable region: 30
[2026-02-03 19:04:12] 2026-02-03 18:03:00,998 | INFO     | sum of square deviations: 3124858590.0
[2026-02-03 19:04:12] 2026-02-03 18:03:01,000 | INFO     | sum of deviations: 4690456164.000001
[2026-02-03 19:04:12] 2026-02-03 18:03:01,000 | INFO     | mean x: 1770134830.5
[2026-02-03 19:04:12] 2026-02-03 18:03:01,000 | INFO     | mean y: 2505239.888888889
[2026-02-03 19:04:12] 2026-02-03 18:03:01,000 | INFO     | intersect: -2654491736.998255
[2026-02-03 19:04:12] 2026-02-03 18:03:01,001 | INFO     | chi2: 0.0009478579989596276
[2026-02-03 19:04:12] 2026-02-03 18:03:01,001 | INFO     | current memory leak: 1.50 B/s (using 216 data points, chi2=0.00)
[2026-02-03 19:04:12] 2026-02-03 18:03:01,001 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-02-03 19:04:12] 2026-02-03 18:03:01,002 | INFO     | ..............................
[2026-02-03 19:04:12] 2026-02-03 18:03:01,002 | INFO     | . Timing measurements:
[2026-02-03 19:04:12] 2026-02-03 18:03:01,002 | INFO     | . get job = 0 s
[2026-02-03 19:04:12] 2026-02-03 18:03:01,002 | INFO     | . initial setup = 123 s
[2026-02-03 19:04:12] 2026-02-03 18:03:01,002 | INFO     | . payload setup = 150 s
[2026-02-03 19:04:12] 2026-02-03 18:03:01,002 | INFO     | . stage-in = 0 s
[2026-02-03 19:04:12] 2026-02-03 18:03:01,002 | INFO     | . payload execution = 15464 s
[2026-02-03 19:04:12] 2026-02-03 18:03:01,003 | INFO     | . stage-out = 3 s
[2026-02-03 19:04:12] 2026-02-03 18:03:01,003 | INFO     | . log creation = 1 s
[2026-02-03 19:04:12] 2026-02-03 18:03:01,003 | INFO     | ..............................
[2026-02-03 19:04:12] 2026-02-03 18:03:01,516 | INFO     | 
[2026-02-03 19:04:12] 2026-02-03 18:03:01,517 | INFO     | job summary report
[2026-02-03 19:04:12] 2026-02-03 18:03:01,517 | INFO     | --------------------------------------------------
[2026-02-03 19:04:12] 2026-02-03 18:03:01,517 | INFO     | PanDA job id: 6983466828
[2026-02-03 19:04:12] 2026-02-03 18:03:01,517 | INFO     | task id: 48318034
[2026-02-03 19:04:12] 2026-02-03 18:03:01,517 | INFO     | errors: (none)
[2026-02-03 19:04:12] 2026-02-03 18:03:01,517 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-03 19:04:12] 2026-02-03 18:03:01,517 | INFO     | pilot state: finished 
[2026-02-03 19:04:12] 2026-02-03 18:03:01,518 | INFO     | transexitcode: 0
[2026-02-03 19:04:12] 2026-02-03 18:03:01,518 | INFO     | exeerrorcode: 0
[2026-02-03 19:04:12] 2026-02-03 18:03:01,518 | INFO     | exeerrordiag: 
[2026-02-03 19:04:12] 2026-02-03 18:03:01,518 | INFO     | exitcode: 0
[2026-02-03 19:04:12] 2026-02-03 18:03:01,518 | INFO     | exitmsg: OK
[2026-02-03 19:04:12] 2026-02-03 18:03:01,518 | INFO     | cpuconsumptiontime: 58094 s
[2026-02-03 19:04:12] 2026-02-03 18:03:01,518 | INFO     | nevents: 400
[2026-02-03 19:04:12] 2026-02-03 18:03:01,518 | INFO     | neventsw: 0
[2026-02-03 19:04:12] 2026-02-03 18:03:01,518 | INFO     | pid: 7985
[2026-02-03 19:04:12] 2026-02-03 18:03:01,518 | INFO     | pgrp: 7985
[2026-02-03 19:04:12] 2026-02-03 18:03:01,519 | INFO     | corecount: 8
[2026-02-03 19:04:12] 2026-02-03 18:03:01,519 | INFO     | event service: False
[2026-02-03 19:04:12] 2026-02-03 18:03:01,519 | INFO     | sizes: {0: 2277140, 1: 2278199, 2: 2278287, 15618: 2309431, 15619: 2309430, 15622: 2318670, 15624: 2318808}
[2026-02-03 19:04:12] 2026-02-03 18:03:01,519 | INFO     | --------------------------------------------------
[2026-02-03 19:04:12] 2026-02-03 18:03:01,519 | INFO     | 
[2026-02-03 19:04:12] 2026-02-03 18:03:01,519 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2026-02-03 19:04:12] 2026-02-03 18:03:02,065 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-03 19:04:12] 2026-02-03 18:03:02,065 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-03 19:04:12] 2026-02-03 18:03:02,065 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-03 19:04:12] 2026-02-03 18:03:02,066 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-03 19:04:12] 2026-02-03 18:03:02,066 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-03 19:04:12] 2026-02-03 18:03:02,066 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-03 19:04:12] 2026-02-03 18:03:02,066 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-03 19:04:12] 2026-02-03 18:03:02,066 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-03 19:04:12] 2026-02-03 18:03:02,066 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-03 19:04:12] 2026-02-03 18:03:02,066 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-03 19:04:12] 2026-02-03 18:03:02,066 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-03 19:04:12] 2026-02-03 18:03:02,066 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-03 19:04:12] 2026-02-03 18:03:02,066 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-03 19:04:12] 2026-02-03 18:03:02,067 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-03 19:04:12] 2026-02-03 18:03:02,067 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-03 19:04:12] 2026-02-03 18:03:02,067 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-03 19:04:12] 2026-02-03 18:03:02,067 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-03 19:04:12] 2026-02-03 18:03:02,067 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-03 19:04:12] 2026-02-03 18:03:02,067 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-03 19:04:12] 2026-02-03 18:03:02,067 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-03 19:04:12] 2026-02-03 18:03:02,067 | INFO     | job 6983466828 has completed (purged errors)
[2026-02-03 19:04:12] 2026-02-03 18:03:02,067 | INFO     | overall cleanup function is called
[2026-02-03 19:04:12] 2026-02-03 18:03:03,075 | INFO     | --- collectZombieJob: --- 10, [7985]
[2026-02-03 19:04:12] 2026-02-03 18:03:03,076 | INFO     | zombie collector waiting for pid 7985
[2026-02-03 19:04:12] 2026-02-03 18:03:03,076 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-03 19:04:12] 2026-02-03 18:03:03,076 | INFO     | collected zombie processes
[2026-02-03 19:04:12] 2026-02-03 18:03:03,076 | INFO     | will attempt to kill all subprocesses of pid=7985
[2026-02-03 19:04:12] 2026-02-03 18:03:03,154 | INFO     | process IDs to be killed: [7985] (in reverse order)
[2026-02-03 19:04:12] 2026-02-03 18:03:03,987 | WARNING  | found no corresponding commands to process id(s)
[2026-02-03 19:04:12] 2026-02-03 18:03:03,988 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-03 19:04:12] 2026-02-03 18:03:03,990 | INFO     | did not find any defunct processes belonging to 7985
[2026-02-03 19:04:12] 2026-02-03 18:03:03,991 | INFO     | did not find any defunct processes belonging to 7985
[2026-02-03 19:04:12] 2026-02-03 18:03:03,991 | INFO     | ready for new job
[2026-02-03 19:04:12] 2026-02-03 18:03:03,992 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-03 19:04:12] 2026-02-03 18:03:03,994 | INFO     | **************************************
[2026-02-03 19:04:12] 2026-02-03 18:03:03,994 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-03 19:04:12] 2026-02-03 18:03:03,994 | INFO     | **************************************
[2026-02-03 19:04:12] 2026-02-03 18:03:03,994 | INFO     | 
[2026-02-03 19:04:12] 2026-02-03 18:03:03,995 | INFO     | pilot is running in a VM
[2026-02-03 19:04:12] 2026-02-03 18:03:03,995 | INFO     | architecture information:
[2026-02-03 19:04:12] 2026-02-03 18:03:04,005 | INFO     | executing command: cat /etc/os-release
[2026-02-03 19:04:12] 2026-02-03 18:03:04,293 | INFO     | cat /etc/os-release:
[2026-02-03 19:04:12] NAME="CentOS Linux"
[2026-02-03 19:04:12] VERSION="7 (Core)"
[2026-02-03 19:04:12] ID="centos"
[2026-02-03 19:04:12] ID_LIKE="rhel fedora"
[2026-02-03 19:04:12] VERSION_ID="7"
[2026-02-03 19:04:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-03 19:04:12] ANSI_COLOR="0;31"
[2026-02-03 19:04:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-03 19:04:12] HOME_URL="https://www.centos.org/"
[2026-02-03 19:04:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-03 19:04:12] 
[2026-02-03 19:04:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-03 19:04:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-03 19:04:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-03 19:04:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-03 19:04:12] 
[2026-02-03 19:04:12] 2026-02-03 18:03:04,293 | INFO     | **************************************
[2026-02-03 19:04:12] 2026-02-03 18:03:04,797 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2026-02-03 19:04:12] 2026-02-03 18:03:05,106 | INFO     | sufficient remaining disk space (494813577216 B)
[2026-02-03 19:04:12] 2026-02-03 18:03:05,106 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-03 19:04:12] 2026-02-03 18:03:05,107 | INFO     | current server update state: UPDATING_FINAL
[2026-02-03 19:04:12] 2026-02-03 18:03:05,107 | INFO     | update_server=False
[2026-02-03 19:04:12] 2026-02-03 18:03:05,107 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-03 19:04:12] 2026-02-03 18:03:05,144 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-03 19:04:12] 2026-02-03 18:03:05,145 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-03 19:04:12] 2026-02-03 18:03:05,145 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-03 19:04:12] 2026-02-03 18:03:05,145 | INFO     | will abort loop
[2026-02-03 19:04:12] 2026-02-03 18:03:05,381 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-03 19:04:12] 2026-02-03 18:03:05,680 | INFO     | all data control threads have been joined
[2026-02-03 19:04:12] 2026-02-03 18:03:06,044 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-03 19:04:12] 2026-02-03 18:03:06,113 | INFO     | [job] retrieve thread has finished
[2026-02-03 19:04:12] 2026-02-03 18:03:06,151 | INFO     | [job] job monitor thread has finished
[2026-02-03 19:04:12] 2026-02-03 18:03:06,175 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-03 19:04:12] 2026-02-03 18:03:06,206 | INFO     | all job control threads have been joined
[2026-02-03 19:04:12] 2026-02-03 18:03:06,237 | INFO     | all payload control threads have been joined
[2026-02-03 19:04:12] 2026-02-03 18:03:06,289 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-03 19:04:12] 2026-02-03 18:03:06,366 | INFO     | [data] copytool_in thread has finished
[2026-02-03 19:04:12] 2026-02-03 18:03:06,553 | INFO     | [payload] validate_pre thread has finished
[2026-02-03 19:04:12] 2026-02-03 18:03:06,687 | INFO     | [data] control thread has finished
[2026-02-03 19:04:12] 2026-02-03 18:03:06,740 | INFO     | [payload] validate_post thread has finished
[2026-02-03 19:04:12] 2026-02-03 18:03:06,881 | INFO     | [job] validate thread has finished
[2026-02-03 19:04:12] 2026-02-03 18:03:07,182 | INFO     | [job] queue monitor thread has finished
[2026-02-03 19:04:12] 2026-02-03 18:03:07,193 | INFO     | [payload] failed_post thread has finished
[2026-02-03 19:04:12] 2026-02-03 18:03:07,213 | INFO     | [job] control thread has finished
[2026-02-03 19:04:12] 2026-02-03 18:03:07,244 | INFO     | [payload] control thread has finished
[2026-02-03 19:04:12] 2026-02-03 18:03:07,246 | INFO     | [job] create_data_payload thread has finished
[2026-02-03 19:04:12] 2026-02-03 18:03:07,389 | INFO     | [data] copytool_out thread has finished
[2026-02-03 19:04:12] 2026-02-03 18:03:07,455 | INFO     | [payload] execute_payloads thread has finished
[2026-02-03 19:04:12] 2026-02-03 18:03:10,053 | INFO     | [data] queue_monitor thread has finished
[2026-02-03 19:04:12] 2026-02-03 18:03:33,710 | INFO     | PID=3528 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-02-03 19:04:12] 2026-02-03 18:03:33,710 | INFO     | .. there are 2 such processes running
[2026-02-03 19:04:12] 2026-02-03 18:03:33,711 | INFO     | found 0 job(s) in 20 queues
[2026-02-03 19:04:12] 2026-02-03 18:03:33,711 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-03 19:04:12] 2026-02-03 18:03:33,711 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-03 19:04:12] 2026-02-03 18:04:00,899 | INFO     | [monitor] cgroup control has ended
[2026-02-03 19:04:12] 2026-02-03 18:04:01,395 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139883677943616)>', '<ExcThread(monitor, started 139883234445056)>']
[2026-02-03 19:04:12] 2026-02-03 18:04:01,875 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-03 19:04:12] 2026-02-03 18:04:01,876 | INFO     | [monitor] control thread has ended
[2026-02-03 19:04:12] 2026-02-03 18:04:06,420 | INFO     | all workflow threads have been joined
[2026-02-03 19:04:12] 2026-02-03 18:04:06,421 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-03 19:04:12] 2026-02-03 18:04:06,421 | INFO     | traces error code: 0
[2026-02-03 19:04:12] 2026-02-03 18:04:06,421 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-03 19:04:12] 2026-02-03 18:04:06,779 [wrapper] ==== pilot stdout END ====
[2026-02-03 19:04:12] 2026-02-03 18:04:06,884 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-03 19:04:12] 2026-02-03 18:04:06,958 [wrapper] pilotpid: 3528
[2026-02-03 19:04:12] 2026-02-03 18:04:07,034 [wrapper] Pilot exit status: 0
[2026-02-03 19:04:12] 2026-02-03 18:04:07,580 [wrapper] pandaids: 6983466828
[2026-02-03 19:04:12] 2026-02-03 18:04:08,771 [wrapper] cleanup supervisor_pilot 14272 3529
[2026-02-03 19:04:12] 2026-02-03 18:04:08,856 [wrapper] Test setup, not cleaning
[2026-02-03 19:04:12] 2026-02-03 18:04:08,972 [wrapper] apfmon messages muted
[2026-02-03 19:04:12] 2026-02-03 18:04:09,067 [wrapper] ==== wrapper stdout END ====
[2026-02-03 19:04:12] 2026-02-03 18:04:09,124 [wrapper] ==== wrapper stderr END ====
[2026-02-03 19:04:12]  *** Error codes and diagnostics ***
[2026-02-03 19:04:12]     "exeErrorCode": 0,
[2026-02-03 19:04:12]     "exeErrorDiag": "",
[2026-02-03 19:04:12]     "pilotErrorCode": 0,
[2026-02-03 19:04:12]     "pilotErrorDiag": "",
[2026-02-03 19:04:12]  *** Listing of results directory ***
[2026-02-03 19:04:12] total 675828
[2026-02-03 19:04:12] -rw-r--r--. 1 boinc boinc    584422 Jan 25 23:54 pilot3.tar.gz
[2026-02-03 19:04:12] -rw-r--r--. 1 boinc boinc      5111 Jan 25 23:54 queuedata.json
[2026-02-03 19:04:12] -rwx------. 1 boinc boinc     36322 Jan 25 23:54 runpilot2-wrapper.sh
[2026-02-03 19:04:12] -rw-r--r--. 1 boinc boinc       100 Feb  3 14:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-03 19:04:12] -rwxr-xr-x. 1 boinc boinc      7986 Feb  3 14:35 run_atlas
[2026-02-03 19:04:12] -rw-r--r--. 1 boinc boinc       105 Feb  3 14:35 job.xml
[2026-02-03 19:04:12] -rw-r--r--. 1 boinc boinc      6391 Feb  3 14:35 init_data.xml
[2026-02-03 19:04:12] -rw-r--r--. 2 boinc boinc 496450697 Feb  3 14:35 EVNT.48318032._000032.pool.root.1
[2026-02-03 19:04:12] -rw-r--r--. 2 boinc boinc     15845 Feb  3 14:35 start_atlas.sh
[2026-02-03 19:04:12] drwxrwx--x. 2 boinc boinc        68 Feb  3 14:35 shared
[2026-02-03 19:04:12] -rw-r--r--. 2 boinc boinc    597754 Feb  3 14:35 input.tar.gz
[2026-02-03 19:04:12] -rw-r--r--. 1 boinc boinc         0 Feb  3 14:35 boinc_lockfile
[2026-02-03 19:04:12] -rw-r--r--. 1 boinc boinc      2532 Feb  3 14:36 pandaJob.out
[2026-02-03 19:04:12] -rw-------. 1 boinc boinc       415 Feb  3 14:42 workernode_map.json
[2026-02-03 19:04:12] -rw-------. 1 boinc boinc   1009258 Feb  3 14:42 agis_schedconf.cvmfs.json
[2026-02-03 19:04:12] drwx------. 5 boinc boinc      4096 Feb  3 14:42 pilot3
[2026-02-03 19:04:12] -rw-------. 1 boinc boinc 186351093 Feb  3 19:01 HITS.48318034._001554.pool.root.1
[2026-02-03 19:04:12] -rw-r--r--. 1 boinc boinc       532 Feb  3 19:02 boinc_task_state.xml
[2026-02-03 19:04:12] -rw-------. 1 boinc boinc      1024 Feb  3 19:02 memory_monitor_summary.json
[2026-02-03 19:04:12] -rw-------. 1 boinc boinc        95 Feb  3 19:02 pilot_heartbeat.json
[2026-02-03 19:04:12] -rw-------. 1 boinc boinc   1511668 Feb  3 19:02 agis_ddmendpoints.agis.ALL.json
[2026-02-03 19:04:12] -rw-------. 1 boinc boinc    469706 Feb  3 19:02 log.48318034._001554.job.log.tgz.1
[2026-02-03 19:04:12] -rw-------. 1 boinc boinc      6313 Feb  3 19:03 heartbeat.json
[2026-02-03 19:04:12] -rw-r--r--. 1 boinc boinc        28 Feb  3 19:03 wrapper_checkpoint.txt
[2026-02-03 19:04:12] -rw-r--r--. 1 boinc boinc      8192 Feb  3 19:03 boinc_mmap_file
[2026-02-03 19:04:12] -rw-------. 1 boinc boinc      5066 Feb  3 19:04 pilotlog.txt
[2026-02-03 19:04:12] -rw-------. 1 boinc boinc   2190665 Feb  3 19:04 log.48318034._001554.job.log.1
[2026-02-03 19:04:12] -rw-------. 1 boinc boinc       357 Feb  3 19:04 output.list
[2026-02-03 19:04:12] -rw-r--r--. 1 boinc boinc       620 Feb  3 19:04 runtime_log
[2026-02-03 19:04:12] -rw-------. 1 boinc boinc   2682880 Feb  3 19:04 result.tar.gz
[2026-02-03 19:04:12] -rw-r--r--. 1 boinc boinc      8832 Feb  3 19:04 runtime_log.err
[2026-02-03 19:04:12] -rw-------. 1 boinc boinc       655 Feb  3 19:04 9OJMDm3AO48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmpv1KDmICuERn.diag
[2026-02-03 19:04:12] -rw-r--r--. 1 boinc boinc     20705 Feb  3 19:04 stderr.txt
[2026-02-03 19:04:12] HITS file was successfully produced:
[2026-02-03 19:04:12] -rw-------. 1 boinc boinc 186351093 Feb  3 19:01 shared/HITS.pool.root.1
[2026-02-03 19:04:12]  *** Contents of shared directory: ***
[2026-02-03 19:04:12] total 670020
[2026-02-03 19:04:12] -rw-r--r--. 2 boinc boinc 496450697 Feb  3 14:35 ATLAS.root_0
[2026-02-03 19:04:12] -rw-r--r--. 2 boinc boinc     15845 Feb  3 14:35 start_atlas.sh
[2026-02-03 19:04:12] -rw-r--r--. 2 boinc boinc    597754 Feb  3 14:35 input.tar.gz
[2026-02-03 19:04:12] -rw-------. 1 boinc boinc 186351093 Feb  3 19:01 HITS.pool.root.1
[2026-02-03 19:04:12] -rw-------. 1 boinc boinc   2682880 Feb  3 19:04 result.tar.gz
19:04:14 (31942): run_atlas exited; CPU time 58267.608897
19:04:14 (31942): called boinc_finish(0)

</stderr_txt>
]]>

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