Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:53:15 (25585): wrapper (7.7.26015): starting
14:53:15 (25585): wrapper: running run_atlas (--nthreads 8)
[2026-02-03 14:53:15] Arguments: --nthreads 8
[2026-02-03 14:53:15] Threads: 8
[2026-02-03 14:53:15] Checking for CVMFS
[2026-02-03 14:53:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-03 14:53:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-03 14:53:17] Running cvmfs_config stat atlas.cern.ch
[2026-02-03 14:53:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-03 14:53:18] 2.11.2.0 5583 71502 135436 155831 2 54 17190814 25165824 899 130560 0 22395595 99.851 15410491 3390 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-02-03 14:53:18] CVMFS is ok
[2026-02-03 14:53:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 14:53:18] Checking for apptainer binary...
[2026-02-03 14:53:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-03 14:53:18] Running /usr/bin/apptainer --version
[2026-02-03 14:53:19] apptainer version 1.3.2-1.el7
[2026-02-03 14:53:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 14:53:49] cg-vwn382.simple-grid.lan
[2026-02-03 14:53:49] apptainer works
[2026-02-03 14:53:49] Set ATHENA_PROC_NUMBER=8
[2026-02-03 14:53:49] Set ATHENA_CORE_NUMBER=8
[2026-02-03 14:53:49] Starting ATLAS job with PandaID=6993667635
[2026-02-03 14:53:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-03 18:36:43]  *** The last 200 lines of the pilot log: ***
[2026-02-03 18:36:43] 2026-02-03 17:35:46,944 | INFO     | total number of processed events: 400 (read)
[2026-02-03 18:36:43] 2026-02-03 17:35:46,946 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6993667635/memory_monitor_summary.json (trf name=prmon)
[2026-02-03 18:36:43] 2026-02-03 17:35:46,946 | INFO     | extracted standard info from prmon json
[2026-02-03 18:36:43] 2026-02-03 17:35:46,947 | INFO     | extracted standard memory fields from prmon json
[2026-02-03 18:36:43] 2026-02-03 17:35:46,947 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-03 18:36:43] 2026-02-03 17:35:46,947 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-03 18:36:43] 2026-02-03 17:35:46,947 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-03 18:36:43] 2026-02-03 17:35:46,952 | INFO     | fitting pss+swap vs Time
[2026-02-03 18:36:43] 2026-02-03 17:35:46,953 | INFO     | sum of square deviations: 2790348132.0
[2026-02-03 18:36:43] 2026-02-03 17:35:46,954 | INFO     | sum of deviations: 116073961508.0
[2026-02-03 18:36:43] 2026-02-03 17:35:46,955 | INFO     | mean x: 1770133802.5
[2026-02-03 18:36:43] 2026-02-03 17:35:46,955 | INFO     | mean y: 2406390.028846154
[2026-02-03 18:36:43] 2026-02-03 17:35:46,955 | INFO     | intersect: -73632291911.2635
[2026-02-03 18:36:43] 2026-02-03 17:35:46,955 | INFO     | chi2: 8.397160492728558
[2026-02-03 18:36:43] 2026-02-03 17:35:46,956 | INFO     | sum of square deviations: 2593916542.0
[2026-02-03 18:36:43] 2026-02-03 17:35:46,957 | INFO     | sum of deviations: 126888609601.0
[2026-02-03 18:36:43] 2026-02-03 17:35:46,958 | INFO     | mean x: 1770133650.0
[2026-02-03 18:36:43] 2026-02-03 17:35:46,958 | INFO     | mean y: 2414576.645320197
[2026-02-03 18:36:43] 2026-02-03 17:35:46,958 | INFO     | intersect: -86588573999.74934
[2026-02-03 18:36:43] 2026-02-03 17:35:46,958 | INFO     | chi2: 7.694947138624425
[2026-02-03 18:36:43] 2026-02-03 17:35:46,958 | INFO     | current chi2=7.694947138624425 (change=8.362509621105946 %)
[2026-02-03 18:36:43] 2026-02-03 17:35:46,963 | INFO     | right removable region: 202
[2026-02-03 18:36:43] 2026-02-03 17:35:46,963 | INFO     | sum of square deviations: 2593916542.0
[2026-02-03 18:36:43] 2026-02-03 17:35:46,959 | INFO     | time since job start (12935s) is within the limit (349056.0s)
[2026-02-03 18:36:43] 2026-02-03 17:35:46,965 | INFO     | sum of deviations: 44265472280.0
[2026-02-03 18:36:43] 2026-02-03 17:35:46,972 | INFO     | mean x: 1770133955.0
[2026-02-03 18:36:43] 2026-02-03 17:35:46,972 | INFO     | mean y: 2462100.5517241377
[2026-02-03 18:36:43] 2026-02-03 17:35:46,972 | INFO     | intersect: -30205069347.828728
[2026-02-03 18:36:43] 2026-02-03 17:35:46,973 | INFO     | chi2: 3.316767586006446
[2026-02-03 18:36:43] 2026-02-03 17:35:46,973 | INFO     | current chi2=3.316767586006446 (change=60.50131959632581 %)
[2026-02-03 18:36:43] 2026-02-03 17:35:46,973 | INFO     | sum of square deviations: 2406926989.5
[2026-02-03 18:36:43] 2026-02-03 17:35:46,975 | INFO     | sum of deviations: -5941635216.000001
[2026-02-03 18:36:43] 2026-02-03 17:35:46,975 | INFO     | mean x: 1770134107.5
[2026-02-03 18:36:43] 2026-02-03 17:35:46,975 | INFO     | mean y: 2502950.0404040404
[2026-02-03 18:36:43] 2026-02-03 17:35:46,975 | INFO     | intersect: 4372178970.977612
[2026-02-03 18:36:43] 2026-02-03 17:35:46,976 | INFO     | chi2: 0.9921684266607456
[2026-02-03 18:36:43] 2026-02-03 17:35:46,976 | INFO     | current chi2=0.9921684266607456 (change=70.0862842833264 %)
[2026-02-03 18:36:43] 2026-02-03 17:35:46,976 | INFO     | sum of square deviations: 2229146912.0
[2026-02-03 18:36:43] 2026-02-03 17:35:46,978 | INFO     | sum of deviations: -18839149476.0
[2026-02-03 18:36:43] 2026-02-03 17:35:46,978 | INFO     | mean x: 1770134260.0
[2026-02-03 18:36:43] 2026-02-03 17:35:46,978 | INFO     | mean y: 2513977.440414508
[2026-02-03 18:36:43] 2026-02-03 17:35:46,978 | INFO     | intersect: 14962418027.375301
[2026-02-03 18:36:43] 2026-02-03 17:35:46,979 | INFO     | chi2: 0.8251325190164178
[2026-02-03 18:36:43] 2026-02-03 17:35:46,979 | INFO     | current chi2=0.8251325190164178 (change=16.835438737604854 %)
[2026-02-03 18:36:43] 2026-02-03 17:35:46,979 | INFO     | left removable region: 30
[2026-02-03 18:36:43] 2026-02-03 17:35:46,979 | INFO     | sum of square deviations: 1577789583.0
[2026-02-03 18:36:43] 2026-02-03 17:35:46,981 | INFO     | sum of deviations: -7594944659.500001
[2026-02-03 18:36:43] 2026-02-03 17:35:46,981 | INFO     | mean x: 1770134534.5
[2026-02-03 18:36:43] 2026-02-03 17:35:46,981 | INFO     | mean y: 2527558.2965116277
[2026-02-03 18:36:43] 2026-02-03 17:35:46,981 | INFO     | intersect: 8523355667.602957
[2026-02-03 18:36:43] 2026-02-03 17:35:46,982 | INFO     | chi2: 0.011830660315351984
[2026-02-03 18:36:43] 2026-02-03 17:35:46,982 | INFO     | current memory leak: -4.81 B/s (using 172 data points, chi2=0.01)
[2026-02-03 18:36:43] 2026-02-03 17:35:46,982 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2026-02-03 18:36:43] 2026-02-03 17:35:46,983 | INFO     | ..............................
[2026-02-03 18:36:43] 2026-02-03 17:35:46,983 | INFO     | . Timing measurements:
[2026-02-03 18:36:43] 2026-02-03 17:35:46,983 | INFO     | . get job = 0 s
[2026-02-03 18:36:43] 2026-02-03 17:35:46,983 | INFO     | . initial setup = 122 s
[2026-02-03 18:36:43] 2026-02-03 17:35:46,983 | INFO     | . payload setup = 142 s
[2026-02-03 18:36:43] 2026-02-03 17:35:46,983 | INFO     | . stage-in = 0 s
[2026-02-03 18:36:43] 2026-02-03 17:35:46,983 | INFO     | . payload execution = 12769 s
[2026-02-03 18:36:43] 2026-02-03 17:35:46,983 | INFO     | . stage-out = 3 s
[2026-02-03 18:36:43] 2026-02-03 17:35:46,983 | INFO     | . log creation = 1 s
[2026-02-03 18:36:43] 2026-02-03 17:35:46,983 | INFO     | ..............................
[2026-02-03 18:36:43] 2026-02-03 17:35:47,138 | INFO     | 
[2026-02-03 18:36:43] 2026-02-03 17:35:47,138 | INFO     | job summary report
[2026-02-03 18:36:43] 2026-02-03 17:35:47,138 | INFO     | --------------------------------------------------
[2026-02-03 18:36:43] 2026-02-03 17:35:47,138 | INFO     | PanDA job id: 6993667635
[2026-02-03 18:36:43] 2026-02-03 17:35:47,138 | INFO     | task id: 48318042
[2026-02-03 18:36:43] 2026-02-03 17:35:47,138 | INFO     | errors: (none)
[2026-02-03 18:36:43] 2026-02-03 17:35:47,138 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-03 18:36:43] 2026-02-03 17:35:47,138 | INFO     | pilot state: finished 
[2026-02-03 18:36:43] 2026-02-03 17:35:47,139 | INFO     | transexitcode: 0
[2026-02-03 18:36:43] 2026-02-03 17:35:47,139 | INFO     | exeerrorcode: 0
[2026-02-03 18:36:43] 2026-02-03 17:35:47,139 | INFO     | exeerrordiag: 
[2026-02-03 18:36:43] 2026-02-03 17:35:47,139 | INFO     | exitcode: 0
[2026-02-03 18:36:43] 2026-02-03 17:35:47,139 | INFO     | exitmsg: OK
[2026-02-03 18:36:43] 2026-02-03 17:35:47,139 | INFO     | cpuconsumptiontime: 59340 s
[2026-02-03 18:36:43] 2026-02-03 17:35:47,139 | INFO     | nevents: 400
[2026-02-03 18:36:43] 2026-02-03 17:35:47,139 | INFO     | neventsw: 0
[2026-02-03 18:36:43] 2026-02-03 17:35:47,139 | INFO     | pid: 1631
[2026-02-03 18:36:43] 2026-02-03 17:35:47,140 | INFO     | pgrp: 1631
[2026-02-03 18:36:43] 2026-02-03 17:35:47,140 | INFO     | corecount: 8
[2026-02-03 18:36:43] 2026-02-03 17:35:47,140 | INFO     | event service: False
[2026-02-03 18:36:43] 2026-02-03 17:35:47,140 | INFO     | sizes: {0: 2277196, 1: 2277882, 2: 2278343, 13: 2278343, 12916: 2308382, 12919: 2317410, 12922: 2317788}
[2026-02-03 18:36:43] 2026-02-03 17:35:47,140 | INFO     | --------------------------------------------------
[2026-02-03 18:36:43] 2026-02-03 17:35:47,140 | INFO     | 
[2026-02-03 18:36:43] 2026-02-03 17:35:47,140 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2026-02-03 18:36:43] 2026-02-03 17:35:47,612 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-03 18:36:43] 2026-02-03 17:35:47,613 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-03 18:36:43] 2026-02-03 17:35:47,613 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-03 18:36:43] 2026-02-03 17:35:47,613 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-03 18:36:43] 2026-02-03 17:35:47,613 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-03 18:36:43] 2026-02-03 17:35:47,613 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-03 18:36:43] 2026-02-03 17:35:47,613 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-03 18:36:43] 2026-02-03 17:35:47,613 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-03 18:36:43] 2026-02-03 17:35:47,613 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-03 18:36:43] 2026-02-03 17:35:47,614 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-03 18:36:43] 2026-02-03 17:35:47,614 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-03 18:36:43] 2026-02-03 17:35:47,614 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-03 18:36:43] 2026-02-03 17:35:47,614 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-03 18:36:43] 2026-02-03 17:35:47,614 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-03 18:36:43] 2026-02-03 17:35:47,614 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-03 18:36:43] 2026-02-03 17:35:47,614 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-03 18:36:43] 2026-02-03 17:35:47,614 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-03 18:36:43] 2026-02-03 17:35:47,615 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-03 18:36:43] 2026-02-03 17:35:47,615 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-03 18:36:43] 2026-02-03 17:35:47,615 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-03 18:36:43] 2026-02-03 17:35:47,615 | INFO     | job 6993667635 has completed (purged errors)
[2026-02-03 18:36:43] 2026-02-03 17:35:47,615 | INFO     | overall cleanup function is called
[2026-02-03 18:36:43] 2026-02-03 17:35:48,623 | INFO     | --- collectZombieJob: --- 10, [1631]
[2026-02-03 18:36:43] 2026-02-03 17:35:48,623 | INFO     | zombie collector waiting for pid 1631
[2026-02-03 18:36:43] 2026-02-03 17:35:48,623 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-03 18:36:43] 2026-02-03 17:35:48,623 | INFO     | collected zombie processes
[2026-02-03 18:36:43] 2026-02-03 17:35:48,623 | INFO     | will attempt to kill all subprocesses of pid=1631
[2026-02-03 18:36:43] 2026-02-03 17:35:48,708 | INFO     | process IDs to be killed: [1631] (in reverse order)
[2026-02-03 18:36:43] 2026-02-03 17:35:49,546 | WARNING  | found no corresponding commands to process id(s)
[2026-02-03 18:36:43] 2026-02-03 17:35:49,547 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-03 18:36:43] 2026-02-03 17:35:49,549 | INFO     | did not find any defunct processes belonging to 1631
[2026-02-03 18:36:43] 2026-02-03 17:35:49,551 | INFO     | did not find any defunct processes belonging to 1631
[2026-02-03 18:36:43] 2026-02-03 17:35:49,551 | INFO     | ready for new job
[2026-02-03 18:36:43] 2026-02-03 17:35:49,551 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-03 18:36:43] 2026-02-03 17:35:49,553 | INFO     | **************************************
[2026-02-03 18:36:43] 2026-02-03 17:35:49,553 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-03 18:36:43] 2026-02-03 17:35:49,553 | INFO     | **************************************
[2026-02-03 18:36:43] 2026-02-03 17:35:49,554 | INFO     | 
[2026-02-03 18:36:43] 2026-02-03 17:35:49,554 | INFO     | pilot is running in a VM
[2026-02-03 18:36:43] 2026-02-03 17:35:49,554 | INFO     | architecture information:
[2026-02-03 18:36:43] 2026-02-03 17:35:49,562 | INFO     | executing command: cat /etc/os-release
[2026-02-03 18:36:43] 2026-02-03 17:35:49,819 | INFO     | cat /etc/os-release:
[2026-02-03 18:36:43] NAME="CentOS Linux"
[2026-02-03 18:36:43] VERSION="7 (Core)"
[2026-02-03 18:36:43] ID="centos"
[2026-02-03 18:36:43] ID_LIKE="rhel fedora"
[2026-02-03 18:36:43] VERSION_ID="7"
[2026-02-03 18:36:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-03 18:36:43] ANSI_COLOR="0;31"
[2026-02-03 18:36:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-03 18:36:43] HOME_URL="https://www.centos.org/"
[2026-02-03 18:36:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-03 18:36:43] 
[2026-02-03 18:36:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-03 18:36:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-03 18:36:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-03 18:36:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-03 18:36:43] 
[2026-02-03 18:36:43] 2026-02-03 17:35:49,819 | INFO     | **************************************
[2026-02-03 18:36:43] 2026-02-03 17:35:50,323 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2026-02-03 18:36:43] 2026-02-03 17:35:50,526 | INFO     | sufficient remaining disk space (496438870016 B)
[2026-02-03 18:36:43] 2026-02-03 17:35:50,527 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-03 18:36:43] 2026-02-03 17:35:50,527 | INFO     | current server update state: UPDATING_FINAL
[2026-02-03 18:36:43] 2026-02-03 17:35:50,527 | INFO     | update_server=False
[2026-02-03 18:36:43] 2026-02-03 17:35:50,527 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-03 18:36:43] 2026-02-03 17:35:50,528 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-03 18:36:43] 2026-02-03 17:35:50,528 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-03 18:36:43] 2026-02-03 17:35:50,528 | INFO     | aborting loop
[2026-02-03 18:36:43] 2026-02-03 17:35:50,590 | INFO     | all data control threads have been joined
[2026-02-03 18:36:43] 2026-02-03 17:35:50,604 | INFO     | all payload control threads have been joined
[2026-02-03 18:36:43] 2026-02-03 17:35:51,533 | INFO     | [job] retrieve thread has finished
[2026-02-03 18:36:43] 2026-02-03 17:35:51,534 | INFO     | [job] job monitor thread has finished
[2026-02-03 18:36:43] 2026-02-03 17:35:51,596 | INFO     | [data] control thread has finished
[2026-02-03 18:36:43] 2026-02-03 17:35:51,610 | INFO     | [payload] control thread has finished
[2026-02-03 18:36:43] 2026-02-03 17:35:51,787 | INFO     | all job control threads have been joined
[2026-02-03 18:36:43] 2026-02-03 17:35:51,980 | INFO     | [data] copytool_in thread has finished
[2026-02-03 18:36:43] 2026-02-03 17:35:52,062 | INFO     | [payload] execute_payloads thread has finished
[2026-02-03 18:36:43] 2026-02-03 17:35:52,162 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-03 18:36:43] 2026-02-03 17:35:52,342 | INFO     | [payload] failed_post thread has finished
[2026-02-03 18:36:43] 2026-02-03 17:35:52,535 | INFO     | [data] copytool_out thread has finished
[2026-02-03 18:36:43] 2026-02-03 17:35:52,553 | INFO     | [job] validate thread has finished
[2026-02-03 18:36:43] 2026-02-03 17:35:52,699 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-03 18:36:43] 2026-02-03 17:35:52,770 | INFO     | [job] create_data_payload thread has finished
[2026-02-03 18:36:43] 2026-02-03 17:35:52,793 | INFO     | [job] control thread has finished
[2026-02-03 18:36:43] 2026-02-03 17:35:52,802 | INFO     | [payload] validate_pre thread has finished
[2026-02-03 18:36:43] 2026-02-03 17:35:52,990 | INFO     | [payload] validate_post thread has finished
[2026-02-03 18:36:43] 2026-02-03 17:35:53,168 | INFO     | [job] queue monitor thread has finished
[2026-02-03 18:36:43] 2026-02-03 17:35:56,708 | INFO     | [data] queue_monitor thread has finished
[2026-02-03 18:36:43] 2026-02-03 17:36:00,764 | INFO     | job.realtimelogging is not enabled
[2026-02-03 18:36:43] 2026-02-03 17:36:01,770 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-03 18:36:43] 2026-02-03 17:36:20,099 | INFO     | PID=29563 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-03 18:36:43] 2026-02-03 17:36:20,099 | INFO     | .. there are 2 such processes running
[2026-02-03 18:36:43] 2026-02-03 17:36:20,105 | INFO     | found 0 job(s) in 20 queues
[2026-02-03 18:36:43] 2026-02-03 17:36:20,105 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-03 18:36:43] 2026-02-03 17:36:20,105 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-03 18:36:43] 2026-02-03 17:36:32,936 | INFO     | [monitor] cgroup control has ended
[2026-02-03 18:36:43] 2026-02-03 17:36:33,942 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140440657086272)>', '<ExcThread(monitor, started 140440347055872)>']
[2026-02-03 18:36:43] 2026-02-03 17:36:34,188 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-03 18:36:43] 2026-02-03 17:36:34,188 | INFO     | [monitor] control thread has ended
[2026-02-03 18:36:43] 2026-02-03 17:36:38,968 | INFO     | all workflow threads have been joined
[2026-02-03 18:36:43] 2026-02-03 17:36:38,968 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-03 18:36:43] 2026-02-03 17:36:38,968 | INFO     | traces error code: 0
[2026-02-03 18:36:43] 2026-02-03 17:36:38,969 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-03 18:36:43] 2026-02-03 17:36:39,311 [wrapper] ==== pilot stdout END ====
[2026-02-03 18:36:43] 2026-02-03 17:36:39,409 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-03 18:36:43] 2026-02-03 17:36:39,514 [wrapper] pilotpid: 29563
[2026-02-03 18:36:43] 2026-02-03 17:36:39,572 [wrapper] Pilot exit status: 0
[2026-02-03 18:36:43] 2026-02-03 17:36:40,076 [wrapper] pandaids: 6993667635
[2026-02-03 18:36:43] 2026-02-03 17:36:40,924 [wrapper] cleanup supervisor_pilot 23324 29564
[2026-02-03 18:36:43] 2026-02-03 17:36:41,043 [wrapper] Test setup, not cleaning
[2026-02-03 18:36:43] 2026-02-03 17:36:41,107 [wrapper] apfmon messages muted
[2026-02-03 18:36:43] 2026-02-03 17:36:41,170 [wrapper] ==== wrapper stdout END ====
[2026-02-03 18:36:43] 2026-02-03 17:36:41,266 [wrapper] ==== wrapper stderr END ====
[2026-02-03 18:36:43]  *** Error codes and diagnostics ***
[2026-02-03 18:36:43]     "exeErrorCode": 0,
[2026-02-03 18:36:43]     "exeErrorDiag": "",
[2026-02-03 18:36:43]     "pilotErrorCode": 0,
[2026-02-03 18:36:43]     "pilotErrorDiag": "",
[2026-02-03 18:36:43]  *** Listing of results directory ***
[2026-02-03 18:36:43] total 670640
[2026-02-03 18:36:43] -rw-r--r--. 1 boinc boinc    584422 Feb  3 01:37 pilot3.tar.gz
[2026-02-03 18:36:43] -rw-r--r--. 1 boinc boinc      5111 Feb  3 01:37 queuedata.json
[2026-02-03 18:36:43] -rwx------. 1 boinc boinc     36322 Feb  3 01:37 runpilot2-wrapper.sh
[2026-02-03 18:36:43] -rw-r--r--. 1 boinc boinc       100 Feb  3 14:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-03 18:36:43] -rwxr-xr-x. 1 boinc boinc      7986 Feb  3 14:53 run_atlas
[2026-02-03 18:36:43] -rw-r--r--. 1 boinc boinc       105 Feb  3 14:53 job.xml
[2026-02-03 18:36:43] -rw-r--r--. 2 boinc boinc 495314240 Feb  3 14:53 EVNT.48318040._000110.pool.root.1
[2026-02-03 18:36:43] -rw-r--r--. 1 boinc boinc      6392 Feb  3 14:53 init_data.xml
[2026-02-03 18:36:43] -rw-r--r--. 2 boinc boinc     15845 Feb  3 14:53 start_atlas.sh
[2026-02-03 18:36:43] drwxrwx--x. 2 boinc boinc        68 Feb  3 14:53 shared
[2026-02-03 18:36:43] -rw-r--r--. 2 boinc boinc    597768 Feb  3 14:53 input.tar.gz
[2026-02-03 18:36:43] -rw-r--r--. 1 boinc boinc         0 Feb  3 14:53 boinc_lockfile
[2026-02-03 18:36:43] -rw-r--r--. 1 boinc boinc      2536 Feb  3 14:53 pandaJob.out
[2026-02-03 18:36:43] -rw-------. 1 boinc boinc       415 Feb  3 15:00 workernode_map.json
[2026-02-03 18:36:43] -rw-------. 1 boinc boinc   1009258 Feb  3 15:00 agis_schedconf.cvmfs.json
[2026-02-03 18:36:43] drwx------. 5 boinc boinc      4096 Feb  3 15:00 pilot3
[2026-02-03 18:36:43] -rw-------. 1 boinc boinc 182864737 Feb  3 18:34 HITS.48318042._005760.pool.root.1
[2026-02-03 18:36:43] -rw-r--r--. 1 boinc boinc       532 Feb  3 18:34 boinc_task_state.xml
[2026-02-03 18:36:43] -rw-------. 1 boinc boinc      1021 Feb  3 18:35 memory_monitor_summary.json
[2026-02-03 18:36:43] -rw-------. 1 boinc boinc   1511668 Feb  3 18:35 agis_ddmendpoints.agis.ALL.json
[2026-02-03 18:36:43] -rw-------. 1 boinc boinc    484311 Feb  3 18:35 log.48318042._005760.job.log.tgz.1
[2026-02-03 18:36:43] -rw-------. 1 boinc boinc      6331 Feb  3 18:35 heartbeat.json
[2026-02-03 18:36:43] -rw-------. 1 boinc boinc        95 Feb  3 18:36 pilot_heartbeat.json
[2026-02-03 18:36:43] -rw-------. 1 boinc boinc      4953 Feb  3 18:36 pilotlog.txt
[2026-02-03 18:36:43] -rw-r--r--. 1 boinc boinc      8192 Feb  3 18:36 boinc_mmap_file
[2026-02-03 18:36:43] -rw-r--r--. 1 boinc boinc        28 Feb  3 18:36 wrapper_checkpoint.txt
[2026-02-03 18:36:43] -rw-------. 1 boinc boinc   1831648 Feb  3 18:36 log.48318042._005760.job.log.1
[2026-02-03 18:36:43] -rw-------. 1 boinc boinc       357 Feb  3 18:36 output.list
[2026-02-03 18:36:43] -rw-r--r--. 1 boinc boinc       620 Feb  3 18:36 runtime_log
[2026-02-03 18:36:43] -rw-------. 1 boinc boinc   2334720 Feb  3 18:36 result.tar.gz
[2026-02-03 18:36:43] -rw-r--r--. 1 boinc boinc      8832 Feb  3 18:36 runtime_log.err
[2026-02-03 18:36:43] -rw-------. 1 boinc boinc       655 Feb  3 18:36 dMWKDmTbJ78n9Rq4apOajLDm4fhM0noT9bVooX4SDmZNTKDm2vL7Po.diag
[2026-02-03 18:36:43] -rw-r--r--. 1 boinc boinc     20430 Feb  3 18:36 stderr.txt
[2026-02-03 18:36:44] HITS file was successfully produced:
[2026-02-03 18:36:44] -rw-------. 1 boinc boinc 182864737 Feb  3 18:34 shared/HITS.pool.root.1
[2026-02-03 18:36:44]  *** Contents of shared directory: ***
[2026-02-03 18:36:44] total 665168
[2026-02-03 18:36:44] -rw-r--r--. 2 boinc boinc 495314240 Feb  3 14:53 ATLAS.root_0
[2026-02-03 18:36:44] -rw-r--r--. 2 boinc boinc     15845 Feb  3 14:53 start_atlas.sh
[2026-02-03 18:36:44] -rw-r--r--. 2 boinc boinc    597768 Feb  3 14:53 input.tar.gz
[2026-02-03 18:36:44] -rw-------. 1 boinc boinc 182864737 Feb  3 18:34 HITS.pool.root.1
[2026-02-03 18:36:44] -rw-------. 1 boinc boinc   2334720 Feb  3 18:36 result.tar.gz
18:36:45 (25585): run_atlas exited; CPU time 59472.882348
18:36:45 (25585): called boinc_finish(0)

</stderr_txt>
]]>

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