Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:56:53 (7119): wrapper (7.7.26015): starting
01:56:53 (7119): wrapper: running run_atlas (--nthreads 8)
[2026-02-03 01:56:53] Arguments: --nthreads 8
[2026-02-03 01:56:53] Threads: 8
[2026-02-03 01:56:53] Checking for CVMFS
[2026-02-03 01:56:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-03 01:56:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-03 01:56:53] Running cvmfs_config stat atlas.cern.ch
[2026-02-03 01:56:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-03 01:56:53] 2.11.2.0 2913 188219 86444 155820 3 50 10412287 20275201 1 130560 0 57079598 99.862 11839160 34630 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-03 01:56:53] CVMFS is ok
[2026-02-03 01:56:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-03 01:56:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-03 01:56:53] Further information can be found at the LHC@home message board.
[2026-02-03 01:56:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 01:56:53] Checking for apptainer binary...
[2026-02-03 01:56:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-03 01:56:53] Running /usr/bin/apptainer --version
[2026-02-03 01:56:53] apptainer version 1.3.2-1.el7
[2026-02-03 01:56:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 01:56:55] c-115-3.aglt2.org
[2026-02-03 01:56:55] apptainer works
[2026-02-03 01:56:55] Set ATHENA_PROC_NUMBER=8
[2026-02-03 01:56:55] Set ATHENA_CORE_NUMBER=8
[2026-02-03 01:56:55] Starting ATLAS job with PandaID=6993746548
[2026-02-03 01:56:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-03 04:00:34]  *** The last 200 lines of the pilot log: ***
[2026-02-03 04:00:34] 2026-02-03 08:59:55,776 | INFO     | extracted standard info from prmon json
[2026-02-03 04:00:34] 2026-02-03 08:59:55,776 | INFO     | extracted standard memory fields from prmon json
[2026-02-03 04:00:34] 2026-02-03 08:59:55,776 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-03 04:00:34] 2026-02-03 08:59:55,777 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-03 04:00:34] 2026-02-03 08:59:55,777 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-03 04:00:34] 2026-02-03 08:59:55,779 | INFO     | fitting pss+swap vs Time
[2026-02-03 04:00:34] 2026-02-03 08:59:55,779 | INFO     | sum of square deviations: 549294020.0
[2026-02-03 04:00:34] 2026-02-03 08:59:55,780 | INFO     | sum of deviations: 11237876036.000011
[2026-02-03 04:00:34] 2026-02-03 08:59:55,780 | INFO     | mean x: 1770105523.0
[2026-02-03 04:00:34] 2026-02-03 08:59:55,780 | INFO     | mean y: 2461460.8099173554
[2026-02-03 04:00:34] 2026-02-03 08:59:55,781 | INFO     | intersect: -36211707479.374374
[2026-02-03 04:00:34] 2026-02-03 08:59:55,781 | INFO     | chi2: 2.0714741810141186
[2026-02-03 04:00:34] 2026-02-03 08:59:55,781 | INFO     | sum of square deviations: 483971865.0
[2026-02-03 04:00:34] 2026-02-03 08:59:55,782 | INFO     | sum of deviations: 18514915535.499996
[2026-02-03 04:00:34] 2026-02-03 08:59:55,782 | INFO     | mean x: 1770105370.5
[2026-02-03 04:00:34] 2026-02-03 08:59:55,782 | INFO     | mean y: 2477822.7155172415
[2026-02-03 04:00:34] 2026-02-03 08:59:55,782 | INFO     | intersect: -67714994604.61748
[2026-02-03 04:00:34] 2026-02-03 08:59:55,783 | INFO     | chi2: 1.2977565116744032
[2026-02-03 04:00:34] 2026-02-03 08:59:55,783 | INFO     | current chi2=1.2977565116744032 (change=37.351065073904586 %)
[2026-02-03 04:00:34] 2026-02-03 08:59:55,783 | INFO     | sum of square deviations: 424045160.0
[2026-02-03 04:00:34] 2026-02-03 08:59:55,784 | INFO     | sum of deviations: 17617999198.999996
[2026-02-03 04:00:34] 2026-02-03 08:59:55,784 | INFO     | mean x: 1770105218.0
[2026-02-03 04:00:34] 2026-02-03 08:59:55,784 | INFO     | mean y: 2475538.936936937
[2026-02-03 04:00:34] 2026-02-03 08:59:55,784 | INFO     | intersect: -73540899682.8666
[2026-02-03 04:00:34] 2026-02-03 08:59:55,785 | INFO     | chi2: 1.298744296282867
[2026-02-03 04:00:34] 2026-02-03 08:59:55,785 | INFO     | current chi2=1.298744296282867 (change=-0.07611478729467964 %)
[2026-02-03 04:00:34] 2026-02-03 08:59:55,785 | INFO     | right removable region: 110
[2026-02-03 04:00:34] 2026-02-03 08:59:55,785 | INFO     | sum of square deviations: 483971865.0
[2026-02-03 04:00:34] 2026-02-03 08:59:55,786 | INFO     | sum of deviations: -4633656563.0
[2026-02-03 04:00:34] 2026-02-03 08:59:55,786 | INFO     | mean x: 1770105675.5
[2026-02-03 04:00:34] 2026-02-03 08:59:55,786 | INFO     | mean y: 2497710.706896552
[2026-02-03 04:00:34] 2026-02-03 08:59:55,787 | INFO     | intersect: 16949891502.873148
[2026-02-03 04:00:34] 2026-02-03 08:59:55,787 | INFO     | chi2: 0.8054366724094504
[2026-02-03 04:00:34] 2026-02-03 08:59:55,787 | INFO     | current chi2=0.8054366724094504 (change=61.11770642416901 %)
[2026-02-03 04:00:34] 2026-02-03 08:59:55,787 | INFO     | sum of square deviations: 424045160.0
[2026-02-03 04:00:34] 2026-02-03 08:59:55,788 | INFO     | sum of deviations: -5604244825.999999
[2026-02-03 04:00:34] 2026-02-03 08:59:55,788 | INFO     | mean x: 1770105828.0
[2026-02-03 04:00:34] 2026-02-03 08:59:55,788 | INFO     | mean y: 2500170.7477477477
[2026-02-03 04:00:34] 2026-02-03 08:59:55,788 | INFO     | intersect: 23396485915.194035
[2026-02-03 04:00:34] 2026-02-03 08:59:55,789 | INFO     | chi2: 0.8032011412714609
[2026-02-03 04:00:34] 2026-02-03 08:59:55,789 | INFO     | current chi2=0.8032011412714609 (change=0.27755517156946824 %)
[2026-02-03 04:00:34] 2026-02-03 08:59:55,789 | INFO     | left removable region: 20
[2026-02-03 04:00:34] 2026-02-03 08:59:55,789 | INFO     | sum of square deviations: 226022842.5
[2026-02-03 04:00:34] 2026-02-03 08:59:55,790 | INFO     | sum of deviations: 652317530.0
[2026-02-03 04:00:34] 2026-02-03 08:59:55,790 | INFO     | mean x: 1770105797.5
[2026-02-03 04:00:34] 2026-02-03 08:59:55,790 | INFO     | mean y: 2522708.688888889
[2026-02-03 04:00:34] 2026-02-03 08:59:55,790 | INFO     | intersect: -5106124846.099208
[2026-02-03 04:00:34] 2026-02-03 08:59:55,791 | INFO     | chi2: 2.766366776730157e-05
[2026-02-03 04:00:34] 2026-02-03 08:59:55,791 | INFO     | current memory leak: 2.89 B/s (using 90 data points, chi2=0.00)
[2026-02-03 04:00:34] 2026-02-03 08:59:55,791 | INFO     | could have reported an average CPU frequency of 1862 MHz (8 samples)
[2026-02-03 04:00:34] 2026-02-03 08:59:55,792 | INFO     | ..............................
[2026-02-03 04:00:34] 2026-02-03 08:59:55,792 | INFO     | . Timing measurements:
[2026-02-03 04:00:34] 2026-02-03 08:59:55,792 | INFO     | . get job = 0 s
[2026-02-03 04:00:34] 2026-02-03 08:59:55,792 | INFO     | . initial setup = 8 s
[2026-02-03 04:00:34] 2026-02-03 08:59:55,792 | INFO     | . payload setup = 8 s
[2026-02-03 04:00:34] 2026-02-03 08:59:55,793 | INFO     | . stage-in = 0 s
[2026-02-03 04:00:34] 2026-02-03 08:59:55,793 | INFO     | . payload execution = 7334 s
[2026-02-03 04:00:34] 2026-02-03 08:59:55,793 | INFO     | . stage-out = 0 s
[2026-02-03 04:00:34] 2026-02-03 08:59:55,793 | INFO     | . log creation = 0 s
[2026-02-03 04:00:34] 2026-02-03 08:59:55,793 | INFO     | ..............................
[2026-02-03 04:00:34] 2026-02-03 08:59:55,935 | INFO     | PID=11530 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-03 04:00:34] 2026-02-03 08:59:56,055 | INFO     | 
[2026-02-03 04:00:34] 2026-02-03 08:59:56,055 | INFO     | job summary report
[2026-02-03 04:00:34] 2026-02-03 08:59:56,056 | INFO     | --------------------------------------------------
[2026-02-03 04:00:34] 2026-02-03 08:59:56,056 | INFO     | PanDA job id: 6993746548
[2026-02-03 04:00:34] 2026-02-03 08:59:56,056 | INFO     | task id: 48318042
[2026-02-03 04:00:34] 2026-02-03 08:59:56,056 | INFO     | errors: (none)
[2026-02-03 04:00:34] 2026-02-03 08:59:56,056 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-03 04:00:34] 2026-02-03 08:59:56,056 | INFO     | pilot state: finished 
[2026-02-03 04:00:34] 2026-02-03 08:59:56,057 | INFO     | transexitcode: 0
[2026-02-03 04:00:34] 2026-02-03 08:59:56,057 | INFO     | exeerrorcode: 0
[2026-02-03 04:00:34] 2026-02-03 08:59:56,057 | INFO     | exeerrordiag: 
[2026-02-03 04:00:34] 2026-02-03 08:59:56,057 | INFO     | exitcode: 0
[2026-02-03 04:00:34] 2026-02-03 08:59:56,057 | INFO     | exitmsg: OK
[2026-02-03 04:00:34] 2026-02-03 08:59:56,057 | INFO     | cpuconsumptiontime: 54292 s
[2026-02-03 04:00:34] 2026-02-03 08:59:56,058 | INFO     | nevents: 400
[2026-02-03 04:00:34] 2026-02-03 08:59:56,058 | INFO     | neventsw: 0
[2026-02-03 04:00:34] 2026-02-03 08:59:56,058 | INFO     | pid: 18012
[2026-02-03 04:00:34] 2026-02-03 08:59:56,058 | INFO     | pgrp: 18012
[2026-02-03 04:00:34] 2026-02-03 08:59:56,058 | INFO     | corecount: 8
[2026-02-03 04:00:34] 2026-02-03 08:59:56,059 | INFO     | event service: False
[2026-02-03 04:00:34] 2026-02-03 08:59:56,059 | INFO     | sizes: {0: 2278286, 11: 2278286, 7345: 2305591, 7346: 2314644, 7347: 2314838}
[2026-02-03 04:00:34] 2026-02-03 08:59:56,059 | INFO     | --------------------------------------------------
[2026-02-03 04:00:34] 2026-02-03 08:59:56,059 | INFO     | 
[2026-02-03 04:00:34] 2026-02-03 08:59:56,059 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-03 04:00:34] 2026-02-03 08:59:56,091 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-03 04:00:34] 2026-02-03 08:59:56,091 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-03 04:00:34] 2026-02-03 08:59:56,091 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-03 04:00:34] 2026-02-03 08:59:56,092 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-03 04:00:34] 2026-02-03 08:59:56,092 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-03 04:00:34] 2026-02-03 08:59:56,092 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-03 04:00:34] 2026-02-03 08:59:56,092 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-03 04:00:34] 2026-02-03 08:59:56,092 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-03 04:00:34] 2026-02-03 08:59:56,093 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-03 04:00:34] 2026-02-03 08:59:56,093 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-03 04:00:34] 2026-02-03 08:59:56,093 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-03 04:00:34] 2026-02-03 08:59:56,093 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-03 04:00:34] 2026-02-03 08:59:56,093 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-03 04:00:34] 2026-02-03 08:59:56,093 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-03 04:00:34] 2026-02-03 08:59:56,094 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-03 04:00:34] 2026-02-03 08:59:56,094 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-03 04:00:34] 2026-02-03 08:59:56,094 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-03 04:00:34] 2026-02-03 08:59:56,094 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-03 04:00:34] 2026-02-03 08:59:56,094 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-03 04:00:34] 2026-02-03 08:59:56,094 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-03 04:00:34] 2026-02-03 08:59:56,095 | INFO     | job 6993746548 has completed (purged errors)
[2026-02-03 04:00:34] 2026-02-03 08:59:56,095 | INFO     | overall cleanup function is called
[2026-02-03 04:00:34] 2026-02-03 08:59:56,750 | WARNING  | process 18012 can no longer be monitored (due to stat problems) - aborting
[2026-02-03 04:00:34] 2026-02-03 08:59:56,818 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-03 04:00:34] 2026-02-03 08:59:56,899 | INFO     | number of running child processes to parent process 18012: 1
[2026-02-03 04:00:34] 2026-02-03 08:59:56,899 | INFO     | maximum number of monitored processes: 6
[2026-02-03 04:00:34] 2026-02-03 08:59:56,899 | INFO     | aborting job monitoring since job object (job id=6993746548) has expired
[2026-02-03 04:00:34] 2026-02-03 08:59:57,104 | INFO     | --- collectZombieJob: --- 10, [18012]
[2026-02-03 04:00:34] 2026-02-03 08:59:57,104 | INFO     | zombie collector waiting for pid 18012
[2026-02-03 04:00:34] 2026-02-03 08:59:57,104 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-03 04:00:34] 2026-02-03 08:59:57,104 | INFO     | collected zombie processes
[2026-02-03 04:00:34] 2026-02-03 08:59:57,105 | INFO     | will attempt to kill all subprocesses of pid=18012
[2026-02-03 04:00:34] 2026-02-03 08:59:57,185 | INFO     | process IDs to be killed: [18012] (in reverse order)
[2026-02-03 04:00:34] 2026-02-03 08:59:57,244 | WARNING  | found no corresponding commands to process id(s)
[2026-02-03 04:00:34] 2026-02-03 08:59:57,244 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-03 04:00:34] 2026-02-03 08:59:57,249 | INFO     | did not find any defunct processes belonging to 18012
[2026-02-03 04:00:34] 2026-02-03 08:59:57,252 | INFO     | did not find any defunct processes belonging to 18012
[2026-02-03 04:00:34] 2026-02-03 08:59:57,252 | INFO     | ready for new job
[2026-02-03 04:00:34] 2026-02-03 08:59:57,253 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-03 04:00:34] 2026-02-03 08:59:57,254 | INFO     | **************************************
[2026-02-03 04:00:34] 2026-02-03 08:59:57,254 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-03 04:00:34] 2026-02-03 08:59:57,254 | INFO     | **************************************
[2026-02-03 04:00:34] 2026-02-03 08:59:57,254 | INFO     | 
[2026-02-03 04:00:34] 2026-02-03 08:59:57,255 | INFO     | architecture information:
[2026-02-03 04:00:34] 2026-02-03 08:59:57,255 | INFO     | executing command: cat /etc/os-release
[2026-02-03 04:00:34] 2026-02-03 08:59:57,275 | INFO     | cat /etc/os-release:
[2026-02-03 04:00:34] NAME="CentOS Linux"
[2026-02-03 04:00:34] VERSION="7 (Core)"
[2026-02-03 04:00:34] ID="centos"
[2026-02-03 04:00:34] ID_LIKE="rhel fedora"
[2026-02-03 04:00:34] VERSION_ID="7"
[2026-02-03 04:00:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-03 04:00:34] ANSI_COLOR="0;31"
[2026-02-03 04:00:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-03 04:00:34] HOME_URL="https://www.centos.org/"
[2026-02-03 04:00:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-03 04:00:34] 
[2026-02-03 04:00:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-03 04:00:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-03 04:00:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-03 04:00:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-03 04:00:34] 
[2026-02-03 04:00:34] 2026-02-03 08:59:57,276 | INFO     | **************************************
[2026-02-03 04:00:34] 2026-02-03 08:59:57,779 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-03 04:00:34] 2026-02-03 08:59:57,801 | INFO     | sufficient remaining disk space (18016632832 B)
[2026-02-03 04:00:34] 2026-02-03 08:59:57,801 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-03 04:00:34] 2026-02-03 08:59:57,802 | INFO     | current server update state: UPDATING_FINAL
[2026-02-03 04:00:34] 2026-02-03 08:59:57,802 | INFO     | update_server=False
[2026-02-03 04:00:34] 2026-02-03 08:59:57,802 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-03 04:00:34] 2026-02-03 08:59:57,802 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-03 04:00:34] 2026-02-03 08:59:57,803 | INFO     | will abort loop
[2026-02-03 04:00:34] 2026-02-03 08:59:57,803 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-03 04:00:34] 2026-02-03 08:59:57,804 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-03 04:00:34] 2026-02-03 08:59:58,344 | INFO     | all job control threads have been joined
[2026-02-03 04:00:34] 2026-02-03 08:59:58,344 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-03 04:00:34] 2026-02-03 08:59:58,347 | INFO     | all data control threads have been joined
[2026-02-03 04:00:34] 2026-02-03 08:59:58,555 | INFO     | all payload control threads have been joined
[2026-02-03 04:00:34] 2026-02-03 08:59:58,804 | INFO     | [job] retrieve thread has finished
[2026-02-03 04:00:34] 2026-02-03 08:59:58,807 | INFO     | [job] job monitor thread has finished
[2026-02-03 04:00:34] 2026-02-03 08:59:58,809 | INFO     | [job] queue monitor thread has finished
[2026-02-03 04:00:34] 2026-02-03 08:59:58,912 | INFO     | [job] validate thread has finished
[2026-02-03 04:00:34] 2026-02-03 08:59:58,927 | INFO     | [job] create_data_payload thread has finished
[2026-02-03 04:00:34] 2026-02-03 08:59:59,048 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-03 04:00:34] 2026-02-03 08:59:59,348 | INFO     | [job] control thread has finished
[2026-02-03 04:00:34] 2026-02-03 08:59:59,348 | INFO     | [data] control thread has finished
[2026-02-03 04:00:34] 2026-02-03 08:59:59,432 | INFO     | [payload] failed_post thread has finished
[2026-02-03 04:00:34] 2026-02-03 08:59:59,446 | INFO     | [payload] validate_pre thread has finished
[2026-02-03 04:00:34] 2026-02-03 08:59:59,560 | INFO     | [payload] control thread has finished
[2026-02-03 04:00:34] 2026-02-03 08:59:59,574 | INFO     | [data] copytool_in thread has finished
[2026-02-03 04:00:34] 2026-02-03 08:59:59,849 | INFO     | [payload] execute_payloads thread has finished
[2026-02-03 04:00:34] 2026-02-03 09:00:00,220 | INFO     | [payload] validate_post thread has finished
[2026-02-03 04:00:34] 2026-02-03 09:00:00,350 | INFO     | [data] copytool_out thread has finished
[2026-02-03 04:00:34] 2026-02-03 09:00:01,810 | INFO     | [data] queue_monitor thread has finished
[2026-02-03 04:00:34] 2026-02-03 09:00:28,143 | INFO     | PID=11530 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-03 04:00:34] 2026-02-03 09:00:28,143 | INFO     | found 0 job(s) in 20 queues
[2026-02-03 04:00:34] 2026-02-03 09:00:28,143 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-03 04:00:34] 2026-02-03 09:00:28,143 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-03 04:00:34] 2026-02-03 09:00:28,674 | INFO     | [monitor] cgroup control has ended
[2026-02-03 04:00:34] 2026-02-03 09:00:29,043 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140619211183936)>', '<ExcThread(monitor, started 140618613376768)>']
[2026-02-03 04:00:34] 2026-02-03 09:00:29,146 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-03 04:00:34] 2026-02-03 09:00:29,147 | INFO     | [monitor] control thread has ended
[2026-02-03 04:00:34] 2026-02-03 09:00:34,068 | INFO     | all workflow threads have been joined
[2026-02-03 04:00:34] 2026-02-03 09:00:34,069 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-03 04:00:34] 2026-02-03 09:00:34,069 | INFO     | traces error code: 0
[2026-02-03 04:00:34] 2026-02-03 09:00:34,069 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-03 04:00:34] 2026-02-03 09:00:34,179 [wrapper] ==== pilot stdout END ====
[2026-02-03 04:00:34] 2026-02-03 09:00:34,184 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-03 04:00:34] 2026-02-03 09:00:34,189 [wrapper] pilotpid: 11530
[2026-02-03 04:00:34] 2026-02-03 09:00:34,194 [wrapper] Pilot exit status: 0
[2026-02-03 04:00:34] 2026-02-03 09:00:34,213 [wrapper] pandaids: 6993746548
[2026-02-03 04:00:34] 2026-02-03 09:00:34,261 [wrapper] cleanup supervisor_pilot 15267 11531
[2026-02-03 04:00:34] 2026-02-03 09:00:34,266 [wrapper] Test setup, not cleaning
[2026-02-03 04:00:34] 2026-02-03 09:00:34,270 [wrapper] apfmon messages muted
[2026-02-03 04:00:34] 2026-02-03 09:00:34,275 [wrapper] ==== wrapper stdout END ====
[2026-02-03 04:00:34] 2026-02-03 09:00:34,279 [wrapper] ==== wrapper stderr END ====
[2026-02-03 04:00:34]  *** Error codes and diagnostics ***
[2026-02-03 04:00:34]     "exeErrorCode": 0,
[2026-02-03 04:00:34]     "exeErrorDiag": "",
[2026-02-03 04:00:34]     "pilotErrorCode": 0,
[2026-02-03 04:00:34]     "pilotErrorDiag": "",
[2026-02-03 04:00:34]  *** Listing of results directory ***
[2026-02-03 04:00:34] total 673900
[2026-02-03 04:00:34] -rw-r--r-- 1 boincer umatlas    584422 Feb  2 22:09 pilot3.tar.gz
[2026-02-03 04:00:34] -rwx------ 1 boincer umatlas     36322 Feb  2 22:10 runpilot2-wrapper.sh
[2026-02-03 04:00:34] -rw-r--r-- 1 boincer umatlas      5111 Feb  2 22:10 queuedata.json
[2026-02-03 04:00:34] -rw-r--r-- 1 boincer umatlas       100 Feb  3 01:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-03 04:00:34] -rwxr-xr-x 1 boincer umatlas      7986 Feb  3 01:56 run_atlas
[2026-02-03 04:00:34] -rw-r--r-- 1 boincer umatlas       105 Feb  3 01:56 job.xml
[2026-02-03 04:00:34] -rw-r--r-- 2 boincer umatlas 497771507 Feb  3 01:56 EVNT.48318040._000111.pool.root.1
[2026-02-03 04:00:34] -rw-r--r-- 2 boincer umatlas     15845 Feb  3 01:56 start_atlas.sh
[2026-02-03 04:00:34] drwxrwx--x 2 boincer umatlas      4096 Feb  3 01:56 shared
[2026-02-03 04:00:34] -rw-r--r-- 2 boincer umatlas    597767 Feb  3 01:56 input.tar.gz
[2026-02-03 04:00:34] -rw-r--r-- 1 boincer umatlas         0 Feb  3 01:56 boinc_lockfile
[2026-02-03 04:00:34] -rw-r--r-- 1 boincer umatlas      2536 Feb  3 01:56 pandaJob.out
[2026-02-03 04:00:34] -rw------- 1 boincer umatlas        57 Feb  3 01:56 setup.sh.local
[2026-02-03 04:00:34] -rw------- 1 boincer umatlas   1009324 Feb  3 01:57 agis_schedconf.cvmfs.json
[2026-02-03 04:00:34] -rw------- 1 boincer umatlas   1511668 Feb  3 01:57 agis_ddmendpoints.agis.ALL.json
[2026-02-03 04:00:34] -rw------- 1 boincer umatlas       432 Feb  3 01:57 workernode_map.json
[2026-02-03 04:00:34] drwx------ 5 boincer umatlas      4096 Feb  3 01:57 pilot3
[2026-02-03 04:00:34] -rw------- 1 boincer umatlas 185454536 Feb  3 03:59 HITS.48318042._005812.pool.root.1
[2026-02-03 04:00:34] -rw-r--r-- 1 boincer umatlas       530 Feb  3 03:59 boinc_task_state.xml
[2026-02-03 04:00:34] -rw------- 1 boincer umatlas        95 Feb  3 03:59 pilot_heartbeat.json
[2026-02-03 04:00:34] -rw------- 1 boincer umatlas      1049 Feb  3 03:59 memory_monitor_summary.json
[2026-02-03 04:00:34] -rw------- 1 boincer umatlas    408683 Feb  3 03:59 log.48318042._005812.job.log.tgz.1
[2026-02-03 04:00:34] -rw------- 1 boincer umatlas      6398 Feb  3 03:59 heartbeat.json
[2026-02-03 04:00:34] -rw-r--r-- 1 boincer umatlas      5908 Feb  3 04:00 init_data.xml
[2026-02-03 04:00:34] -rw-r--r-- 1 boincer umatlas      8192 Feb  3 04:00 boinc_mmap_file
[2026-02-03 04:00:34] -rw-r--r-- 1 boincer umatlas        27 Feb  3 04:00 wrapper_checkpoint.txt
[2026-02-03 04:00:34] -rw------- 1 boincer umatlas      4744 Feb  3 04:00 pilotlog.txt
[2026-02-03 04:00:34] -rw------- 1 boincer umatlas   1046506 Feb  3 04:00 log.48318042._005812.job.log.1
[2026-02-03 04:00:34] -rw------- 1 boincer umatlas       357 Feb  3 04:00 output.list
[2026-02-03 04:00:34] -rw-r--r-- 1 boincer umatlas       620 Feb  3 04:00 runtime_log
[2026-02-03 04:00:34] -rw------- 1 boincer umatlas   1474560 Feb  3 04:00 result.tar.gz
[2026-02-03 04:00:34] -rw-r--r-- 1 boincer umatlas      9336 Feb  3 04:00 runtime_log.err
[2026-02-03 04:00:34] -rw------- 1 boincer umatlas       657 Feb  3 04:00 aVVNDmryL78nsSi4ap6QjLDmwznN0nGgGQJmIVkRDme6TKDmbSXZUo.diag
[2026-02-03 04:00:34] -rw-r--r-- 1 boincer umatlas     21134 Feb  3 04:00 stderr.txt
[2026-02-03 04:00:34] HITS file was successfully produced:
[2026-02-03 04:00:34] -rw------- 1 boincer umatlas 185454536 Feb  3 03:59 shared/HITS.pool.root.1
[2026-02-03 04:00:34]  *** Contents of shared directory: ***
[2026-02-03 04:00:34] total 669256
[2026-02-03 04:00:34] -rw-r--r-- 2 boincer umatlas 497771507 Feb  3 01:56 ATLAS.root_0
[2026-02-03 04:00:34] -rw-r--r-- 2 boincer umatlas     15845 Feb  3 01:56 start_atlas.sh
[2026-02-03 04:00:34] -rw-r--r-- 2 boincer umatlas    597767 Feb  3 01:56 input.tar.gz
[2026-02-03 04:00:34] -rw------- 1 boincer umatlas 185454536 Feb  3 03:59 HITS.pool.root.1
[2026-02-03 04:00:34] -rw------- 1 boincer umatlas   1474560 Feb  3 04:00 result.tar.gz
04:00:36 (7119): run_atlas exited; CPU time 54276.969253
04:00:36 (7119): called boinc_finish(0)

</stderr_txt>
]]>

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